Rmu_sc0010937.1_g000009

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010937.1
Physical Location & Seq
Forward (+)
53538 .. 55589
2052 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010937.1_g000009.1.cds

Sequence Viewer

Length: 384 bp
atgcaagctccagcaatggcgggacatggcgtgttcactgtcaccgataacgaactcttcgactactacccggtctgctatctcaagaacaacgccagcaacgatgatgagaattgtgttgcagctaaaggcaaaggcaacaactttgtgttcaatttggacccaagtttgcttattgacccaagctgcgttgtggttggtgaaatgctcggagaagggccgcaggcgattgtctatgaaggattgtacaattccaaacctgttgctgtgaaaatcatacagccagatgaaacaggtgttatcagtcctgaacgcaaggaaaaatttcagagggaggtgacgttgctgtcaaaggcgagacatgaaaacattgtgaaggtatga

Protein Analysis

127

Amino Acids

13.96

Weight (kDa)

4.96

Isoelectric Point (pI)

21.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012226)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 346
AciI CCGC 2 cut(s) 20, 221
AcsI RAATTY 1 cut(s) 323
AfaI GTAC 1 cut(s) 248
AgsI TTSAA 1 cut(s) 154
AluBI AGCT 3 cut(s) 8, 125, 186
AluI AGCT 3 cut(s) 8, 125, 186
Alw26I GTCTC 1 cut(s) 352
AoxI GGCC 1 cut(s) 218
ApeKI GCWGC 2 cut(s) 122, 186
ApoI RAATTY 1 cut(s) 323
Asp700I GAANNNNTTC 1 cut(s) 324
AspS9I GGNCC 2 cut(s) 160, 218
AsuC2I CCSGG 1 cut(s) 71
AsuHPI GGTGA 3 cut(s) 34, 212, 349
AvaII GGWCC 1 cut(s) 160
BbvI GCAGC 2 cut(s) 134, 173
BcnI CCSGG 1 cut(s) 71
BcoDI GTCTC 1 cut(s) 352
BisI GCNGC 3 cut(s) 123, 187, 221
BlsI GCNGC 3 cut(s) 124, 188, 222
Bme1390I CCNGG 1 cut(s) 71
Bme18I GGWCC 1 cut(s) 160
BmgT120I GGNCC 2 cut(s) 160, 218
BmiI GGNNCC 1 cut(s) 162
BmrFI CCNGG 1 cut(s) 71
BpuEI CTTGAG 1 cut(s) 68
BpuMI CCSGG 1 cut(s) 71
BsaXI ACNNNNNCTCC 2 cut(s) 326, 356
Bse3DI GCAATG 1 cut(s) 21
BseMI GCAATG 1 cut(s) 21
BseXI GCAGC 2 cut(s) 134, 173
BshFI GGCC 1 cut(s) 220
BsiSI CCGG 1 cut(s) 71
BslFI GGGAC 1 cut(s) 36
BsmAI GTCTC 1 cut(s) 352
BsmFI GGGAC 1 cut(s) 36
BsnI GGCC 1 cut(s) 220
Bsp1407I TGTACA 1 cut(s) 246
BspACI CCGC 2 cut(s) 20, 221
BspANI GGCC 1 cut(s) 220
BspLI GGNNCC 1 cut(s) 162
BsrDI GCAATG 1 cut(s) 21
BsrGI TGTACA 1 cut(s) 246
Bst4CI ACNGT 1 cut(s) 40
Bst6I CTCTTC 1 cut(s) 62
BstAUI TGTACA 1 cut(s) 246
BstC8I GCNNGC 3 cut(s) 6, 97, 225
BstMAI GTCTC 1 cut(s) 352
BstSCI CCNGG 1 cut(s) 69
BstV1I GCAGC 2 cut(s) 134, 173
BsuRI GGCC 1 cut(s) 220
BtsIMutI CAGTG 1 cut(s) 36
Cac8I GCNNGC 3 cut(s) 6, 97, 225
Cfr13I GGNCC 2 cut(s) 160, 218
Csp6I GTAC 1 cut(s) 247
CviAII CATG 2 cut(s) 26, 362
CviJI RGCY 5 cut(s) 8, 125, 186, 220, 283
CviKI_1 RGCY 5 cut(s) 8, 125, 186, 220, 283
CviQI GTAC 1 cut(s) 247
DrdI GACNNNNNNGTC 1 cut(s) 346
DseDI GACNNNNNNGTC 1 cut(s) 346
Eam1104I CTCTTC 1 cut(s) 62
EarI CTCTTC 1 cut(s) 62
Eco47I GGWCC 1 cut(s) 160
FaeI CATG 2 cut(s) 29, 365
FaiI YATR 5 cut(s) 27, 237, 278, 363, 382
FaqI GGGAC 1 cut(s) 36
FatI CATG 2 cut(s) 25, 361
FauI CCCGC 1 cut(s) 13
Fnu4HI GCNGC 3 cut(s) 123, 187, 221
Fsp4HI GCNGC 3 cut(s) 123, 187, 221
GluI GCNGC 3 cut(s) 123, 187, 221
HaeIII GGCC 1 cut(s) 220
HapII CCGG 1 cut(s) 71
Hin1II CATG 2 cut(s) 29, 365
HpaII CCGG 1 cut(s) 71
HphI GGTGA 3 cut(s) 34, 212, 349
Hpy166II GTNNAC 1 cut(s) 36
Hpy188I TCNGA 2 cut(s) 212, 330
Hpy188III TCNNGA 2 cut(s) 85, 308
Hpy8I GTNNAC 1 cut(s) 36
HpyAV CCTTC 3 cut(s) 209, 233, 370
HpyCH4III ACNGT 1 cut(s) 40
HpyCH4IV ACGT 1 cut(s) 341
HpyCH4V TGCA 2 cut(s) 4, 122
HpySE526I ACGT 1 cut(s) 341
Hsp92II CATG 2 cut(s) 29, 365
LmnI GCTCC 1 cut(s) 13
LpnPI CCDG 8 cut(s) 24, 84, 109, 209, 273, 279, 297, 321
Lsp1109I GCAGC 2 cut(s) 134, 173
MaeII ACGT 1 cut(s) 341
MaeIII GTNAC 2 cut(s) 40, 337
MboII GAAGA 1 cut(s) 49
MluCI AATT 4 cut(s) 112, 154, 250, 323
MnlI CCTC 2 cut(s) 324, 328
MroXI GAANNNNTTC 1 cut(s) 324
MspI CCGG 1 cut(s) 71
MspR9I CCNGG 1 cut(s) 71
NciI CCSGG 1 cut(s) 71
NlaIII CATG 2 cut(s) 29, 365
NlaIV GGNNCC 1 cut(s) 162
NmuCI GTSAC 2 cut(s) 40, 337
PcsI WCGNNNNNNNCGW 2 cut(s) 57, 99
PdmI GAANNNNTTC 1 cut(s) 324
PkrI GCNGC 3 cut(s) 124, 188, 222
PspN4I GGNNCC 1 cut(s) 162
PspPI GGNCC 2 cut(s) 160, 218
RsaI GTAC 1 cut(s) 248
RsaNI GTAC 1 cut(s) 247
SatI GCNGC 3 cut(s) 123, 187, 221
Sau96I GGNCC 2 cut(s) 160, 218
ScrFI CCNGG 1 cut(s) 71
SetI ASST 8 cut(s) 10, 127, 188, 262, 298, 339, 344, 381
SinI GGWCC 1 cut(s) 160
SmlI CTYRAG 1 cut(s) 83
SmoI CTYRAG 1 cut(s) 83
Sse9I AATT 4 cut(s) 112, 154, 250, 323
SsiI CCGC 2 cut(s) 20, 221
StyD4I CCNGG 1 cut(s) 69
TaaI ACNGT 1 cut(s) 40
TaiI ACGT 1 cut(s) 344
TaqI TCGA 1 cut(s) 60
TasI AATT 4 cut(s) 112, 154, 250, 323
TatI WGTACW 1 cut(s) 246
TauI GCSGC 1 cut(s) 223
TscAI CASTG 1 cut(s) 43
TseFI GTSAC 2 cut(s) 40, 337
TseI GCWGC 2 cut(s) 122, 186
Tsp45I GTSAC 2 cut(s) 40, 337
TspDTI ATGAA 3 cut(s) 252, 303, 378
TspRI CASTG 1 cut(s) 43
VpaK11BI GGWCC 1 cut(s) 160
XapI RAATTY 1 cut(s) 323
XmnI GAANNNNTTC 1 cut(s) 324
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.