Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006040

Physical Location & Seq

Genomic Coordinates Forward (+)

54958 .. 56397

Gene Structure 1440 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

ATCG00490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1440 bp

ATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGGTTCAAAGCTGGTGTTAAAGAGTATAAATTGACTTACTATACTCCTGAATATGAAACCAAGGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCTGGAGTTCCACCTGAAGAAGCAGGGGCTGCGGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGCCTTGATCGTTACAAAGGACGATGCTACCACATCGAGCCCGTTCCAGGAGAAGAAACTCAATTTATTGCGTATGTAGCTTATCCCTTAGACCTTTTTGAAGAAGGTTCGGTTACTAACATGTTTACCTCGATTGTGGGTAATGTATTTGGGTTCAAAGCCCTGGCTGCTCTACGTCTAGAGGATCTGCGAATCCCTCCTGCTTATACTAAAACTTTCCAAGGACCACCTCATGGTATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGACGTCCCCTATTAGGATGTACTATTAAACCAAAATTGGGGTTATCCGCGAAAAACTATGGTAGAGCAGTTTATGAATGTCTACGTGGTGGACTTGATTTTACCAAAGATGATGAGAATGTGAACTCCCAACCATTTATGCGTTGGAGAGACCGTTTCTTATTTTGTGCCGAAGCTATTTATAAATCACAGGCTGAAACAGGTGAAATCAAAGGGCATTATTTGAATGCTACTGCGGGTACATGCGAAGAAATGATCAAAAGAGCTGTATTTGCCAGAGAATTGGGAGTTCCTATCGTAATGCATGACTACTTAACAGGGGGATTCACCGCAAATACTAGTTTGTCTCATTATTGCCGAGATAATGGCCTACTTCTTCACATCCACCGTGCAATGCACGCTGTTATTGATAGACAGAAGAATCATGGTATGCACTTCCGTGTACTAGCTAAAGCTTTACGTCTATCTGGTGGAGATCATATTCACGCGGGTACAGTAGTAGGTAAACTTGAAGGAGACAGGGAGTCAACTTTGGGCTTTGTTGATTTACTGCGCGATGATTATGTTGAAAAAGATCGAAGCCGCGGTATCTTTTTCACTCAAGATTGGGTCTCACTACCTGGTGTTCTGCCTGTGGCTTCAGGGGGTATTCACGTTTGGCATATGCCTGCTTTGACCGAGATCTTTGGAGATGATTCTGTACTACAATTCGGTGGAGGAACTTTAGGCCACCCTTGGGGAAATGCACCGGGTGCCGTAGCCAACCGAGTAGCTCTGGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTTGCAGTCGAGGGTAATGAAATTATCCGTGAAGCTTGCAAATGGAGTCCTGAACTAGCTGCTGCTTGTGAAGTATGGAAAGAGATCACATTTAACTTCCCAACCATCGATAAATTAGATGGCCAAGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000312 GO:0000313 GO:0000314 GO:0001101 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0008150 GO:0009507 GO:0009526 GO:0009532 GO:0009534 GO:0009535 GO:0009536 GO:0009547 GO:0009570 GO:0009579 GO:0009719 GO:0009725 GO:0009737 GO:0009941 GO:0010033 GO:0010035 GO:0010038 GO:0010287 GO:0015935 GO:0016020 GO:0022626 GO:0030312 GO:0031967 GO:0031975 GO:0031976 GO:0031984 GO:0032991 GO:0033993 GO:0034357 GO:0042221 GO:0042651 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044391 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0046686 GO:0048046 GO:0050896 GO:0055035 GO:0071944 GO:0097305 GO:1901700 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00630 ko00710 ko01100 ko01120 ko01200 map00630 map00710 map01100 map01120 map01200

Pfam Domains

Protein Families

RuBisCO_large RuBisCO_large_N

Protein Analysis

479

Amino Acids

52.95

Weight (kDa)

5.88

Isoelectric Point (pI)

42.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RuBisCO_large_N	PF02788	24 - 144	6.1e-43	Ribulose bisphosphate carboxylase large chain, N-terminal domain
RuBisCO_large	PF00016	154 - 462	3.4e-137	Ribulose bisphosphate carboxylase large chain, catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006040)

Species	Orthologous Gene IDs
arabidopsis_thaliana	ATCG00490
malus_domestica	MD02G1049600.v1.1 MD11G1294900.v1.1 MD11G1295000.v1.1
prunus_persica	Prupe.7G029600_v2.0.a1
pyrus_communis	pycom08g13270 pycom12397g00250
rosa_chinensis	RchiOBHm_Chr5g0043011 RchiOBHm_CPg0502111
rosa_laevigata	RLG00000000069 RLG00000000106 RLG00000000163 RLG00000000221 RLG00000000257 RLG00000000267 RLG00000000290 RLG00000000329 RLG00000000350 RLG00000037105
rosa_roxburghii	Rroxscaffold_2G00087120 Rroxscaffold_3G00220720
rosa_rugosa	RorugMtG0002400.1
rosa_samantha	Rh2AG282300 Rh2BG293600 Rh2DG288500 Rh5BG295000 Rh5DG304800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	678
AatII	GACGTC	1 cut(s)	502
AccB1I	GGYRCC	1 cut(s)	1247
AccB7I	CCANNNNNTGG	1 cut(s)	458
AccI	GTMKAC	1 cut(s)	577
AccII	CGCG	4 cut(s)	545, 983, 1050, 1080
AciI	CCGC	7 cut(s)	167, 543, 731, 825, 983, 1078, 1080
AclWI	GGATC	1 cut(s)	417
AcoI	YGGCCR	1 cut(s)	1429
AcuI	CTGAAG	2 cut(s)	171, 1119
AcyI	GRCGYC	1 cut(s)	499
AdeI	CACNNNGTG	1 cut(s)	1247
AfaI	GTAC	7 cut(s)	193, 517, 736, 939, 988, 1197, 1284
AfiI	CCNNNNNNNGG	6 cut(s)	137, 272, 458, 509, 533, 1231
AflIII	ACRYGT	1 cut(s)	345
AgsI	TTSAA	8 cut(s)	40, 326, 382, 473, 487, 721, 1007, 1064
AhdI	GACNNNNNGTC	1 cut(s)	1018
AhlI	ACTAGT	1 cut(s)	833
AjiI	CACGTC	1 cut(s)	1304
AjnI	CCWGG	4 cut(s)	136, 271, 387, 1114
AleI	CACNNNNGTG	1 cut(s)	933
Alw26I	GTCTC	5 cut(s)	11, 639, 846, 1005, 1111
AlwI	GGATC	1 cut(s)	417
AlwNI	CAGNNNCTG	1 cut(s)	164
AoxI	GGCC	3 cut(s)	862, 1222, 1429
ApeKI	GCWGC	6 cut(s)	113, 164, 173, 392, 1367, 1370
AspLEI	GCGC	1 cut(s)	1050
AspS9I	GGNCC	2 cut(s)	210, 449
AsuC2I	CCSGG	1 cut(s)	1245
AsuHPI	GGTGA	2 cut(s)	710, 814
AvaII	GGWCC	2 cut(s)	210, 449
BaeI	ACNNNNGTAYC	2 cut(s)	978, 1011
BalI	TGGCCA	1 cut(s)	1431
BanI	GGYRCC	1 cut(s)	1247
BanII	GRGCYC	1 cut(s)	267
BarI	GAAGNNNNNNTAC	2 cut(s)	1266, 1298
BbvI	GCAGC	6 cut(s)	125, 151, 160, 379, 1354, 1357
BccI	CCATC	3 cut(s)	209, 1421, 1421
BceAI	ACGGC	1 cut(s)	1235
BciT130I	CCWGG	4 cut(s)	138, 273, 389, 1116
BciVI	GTATCC	2 cut(s)	91, 473
BclI	TGATCA	1 cut(s)	750
BcnI	CCSGG	1 cut(s)	1245
BcoDI	GTCTC	5 cut(s)	11, 639, 846, 1005, 1111
BcuI	ACTAGT	1 cut(s)	833
BfaI	CTAG	4 cut(s)	404, 834, 941, 1364
BfuI	GTATCC	2 cut(s)	91, 473
BglII	AGATCT	1 cut(s)	1176
BisI	GCNGC	7 cut(s)	114, 165, 174, 393, 1078, 1368, 1371
BlsI	GCNGC	7 cut(s)	115, 166, 175, 394, 1079, 1369, 1372
Bme1390I	CCNGG	5 cut(s)	138, 273, 389, 1116, 1245
Bme18I	GGWCC	2 cut(s)	210, 449
BmeRI	GACNNNNNGTC	1 cut(s)	1018
BmgBI	CACGTC	1 cut(s)	1304
BmgT120I	GGNCC	2 cut(s)	210, 449
BmiI	GGNNCC	1 cut(s)	1249
BmrFI	CCNGG	5 cut(s)	138, 273, 389, 1116, 1245
BmsI	GCATC	1 cut(s)	239
BpmI	CTGGAG	1 cut(s)	159
BpuEI	CTTGAG	1 cut(s)	1080
BpuMI	CCSGG	1 cut(s)	1245
Bsa29I	ATCGAT	1 cut(s)	1416
BsaAI	YACGTR	1 cut(s)	581
BsaHI	GRCGYC	1 cut(s)	499
BsaI	GGTCTC	2 cut(s)	639, 1111
BsaJI	CCNNGG	5 cut(s)	93, 387, 445, 1078, 1229
BsaXI	ACNNNNNCTCC	2 cut(s)	634, 664
Bsc4I	CCNNNNNNNGG	6 cut(s)	137, 272, 458, 509, 533, 1231
Bse1I	ACTGG	1 cut(s)	193
Bse3DI	GCAATG	1 cut(s)	894
BseBI	CCWGG	4 cut(s)	138, 273, 389, 1116
BseCI	ATCGAT	1 cut(s)	1416
BseDI	CCNNGG	5 cut(s)	93, 387, 445, 1078, 1229
BseGI	GGATG	2 cut(s)	518, 876
BseLI	CCNNNNNNNGG	6 cut(s)	137, 272, 458, 509, 533, 1231
BseMI	GCAATG	1 cut(s)	894
BseNI	ACTGG	1 cut(s)	193
BseRI	GAGGAG	1 cut(s)	120
BseXI	GCAGC	6 cut(s)	125, 151, 160, 379, 1354, 1357
Bsh1236I	CGCG	4 cut(s)	545, 983, 1050, 1080
BshFI	GGCC	3 cut(s)	864, 1224, 1431
BshNI	GGYRCC	1 cut(s)	1247
BshVI	ATCGAT	1 cut(s)	1416
BsiSI	CCGG	1 cut(s)	1244
BslFI	GGGAC	2 cut(s)	486, 1314
BslI	CCNNNNNNNGG	6 cut(s)	137, 272, 458, 509, 533, 1231
BsmAI	GTCTC	5 cut(s)	11, 639, 846, 1005, 1111
BsmFI	GGGAC	2 cut(s)	486, 1314
BsmI	GAATGC	2 cut(s)	116, 727
BsnI	GGCC	3 cut(s)	864, 1224, 1431
Bso31I	GGTCTC	2 cut(s)	639, 1111
Bsp1286I	GDGCHC	1 cut(s)	267
Bsp1407I	TGTACA	1 cut(s)	1282
Bsp143I	GATC	8 cut(s)	232, 409, 750, 970, 1069, 1176, 1306, 1392
BspACI	CCGC	7 cut(s)	167, 543, 731, 825, 983, 1078, 1080
BspANI	GGCC	3 cut(s)	864, 1224, 1431
BspDI	ATCGAT	1 cut(s)	1416
BspFNI	CGCG	4 cut(s)	545, 983, 1050, 1080
BspLI	GGNNCC	1 cut(s)	1249
BspPI	GGATC	1 cut(s)	417
BspT107I	GGYRCC	1 cut(s)	1247
BspTNI	GGTCTC	2 cut(s)	639, 1111
BsrDI	GCAATG	1 cut(s)	894
BsrGI	TGTACA	1 cut(s)	1282
BsrI	ACTGG	1 cut(s)	193
BssECI	CCNNGG	5 cut(s)	93, 387, 445, 1078, 1229
BssMI	GATC	8 cut(s)	232, 409, 750, 970, 1069, 1176, 1306, 1392
BssNI	GRCGYC	1 cut(s)	499
BssT1I	CCWWGG	3 cut(s)	93, 445, 1229
Bst2UI	CCWGG	4 cut(s)	138, 273, 389, 1116
Bst4CI	ACNGT	4 cut(s)	205, 650, 884, 991
BstACI	GRCGYC	1 cut(s)	499
BstAPI	GCANNNNNTGC	2 cut(s)	164, 1247
BstAUI	TGTACA	1 cut(s)	1282
BstBAI	YACGTR	1 cut(s)	581
BstC8I	GCNNGC	3 cut(s)	894, 1164, 1345
BstDEI	CTNAG	1 cut(s)	313
BstDSI	CCRYGG	1 cut(s)	1078
BstF5I	GGATG	2 cut(s)	518, 876
BstFNI	CGCG	4 cut(s)	545, 983, 1050, 1080
BstHHI	GCGC	1 cut(s)	1050
BstKTI	GATC	8 cut(s)	235, 412, 753, 973, 1072, 1179, 1309, 1395
BstMAI	GTCTC	5 cut(s)	11, 639, 846, 1005, 1111
BstMBI	GATC	8 cut(s)	232, 409, 750, 970, 1069, 1176, 1306, 1392
BstMWI	GCNNNNNNNGC	9 cut(s)	164, 170, 173, 302, 392, 767, 893, 1247, 1274
BstNI	CCWGG	4 cut(s)	138, 273, 389, 1116
BstNSI	RCATGY	3 cut(s)	349, 741, 1281
BstSCI	CCNGG	5 cut(s)	136, 271, 387, 1114, 1243
BstUI	CGCG	4 cut(s)	545, 983, 1050, 1080
BstV1I	GCAGC	6 cut(s)	125, 151, 160, 379, 1354, 1357
BstX2I	RGATCY	2 cut(s)	409, 1176
BstXI	CCANNNNNNTGG	1 cut(s)	778
BstYI	RGATCY	2 cut(s)	409, 1176
Bsu15I	ATCGAT	1 cut(s)	1416
BsuI	GTATCC	2 cut(s)	91, 473
BsuRI	GGCC	3 cut(s)	864, 1224, 1431
BsuTUI	ATCGAT	1 cut(s)	1416
BtgI	CCRYGG	1 cut(s)	1078
BtgZI	GCGATG	1 cut(s)	1065
BtrI	CACGTC	1 cut(s)	1304
BtsCI	GGATG	2 cut(s)	518, 876
Cac8I	GCNNGC	3 cut(s)	894, 1164, 1345
CaiI	CAGNNNCTG	1 cut(s)	164
CfoI	GCGC	1 cut(s)	1050
Cfr13I	GGNCC	2 cut(s)	210, 449
Cfr42I	CCGCGG	1 cut(s)	1081
ClaI	ATCGAT	1 cut(s)	1416
CsiI	ACCWGGT	1 cut(s)	1114
Csp6I	GTAC	7 cut(s)	192, 516, 735, 938, 987, 1196, 1283
CviAII	CATG	7 cut(s)	195, 346, 458, 738, 800, 920, 1278
CviQI	GTAC	7 cut(s)	192, 516, 735, 938, 987, 1196, 1283
DdeI	CTNAG	1 cut(s)	313
DpnI	GATC	8 cut(s)	234, 411, 752, 972, 1071, 1178, 1308, 1394
DpnII	GATC	8 cut(s)	232, 409, 750, 970, 1069, 1176, 1306, 1392
DraIII	CACNNNGTG	1 cut(s)	1247
DriI	GACNNNNNGTC	1 cut(s)	1018
EaeI	YGGCCR	1 cut(s)	1429
Eam1105I	GACNNNNNGTC	1 cut(s)	1018
Eco130I	CCWWGG	3 cut(s)	93, 445, 1229
Eco24I	GRGCYC	1 cut(s)	267
Eco31I	GGTCTC	2 cut(s)	639, 1111
Eco32I	GATATC	1 cut(s)	106
Eco47I	GGWCC	2 cut(s)	210, 449
Eco57I	CTGAAG	2 cut(s)	171, 1119
EcoRII	CCWGG	4 cut(s)	136, 271, 387, 1114
EcoRV	GATATC	1 cut(s)	106
EcoT14I	CCWWGG	3 cut(s)	93, 445, 1229
EcoT22I	ATGCAT	1 cut(s)	801
EcoT38I	GRGCYC	1 cut(s)	267
ErhI	CCWWGG	3 cut(s)	93, 445, 1229
FaeI	CATG	7 cut(s)	198, 349, 461, 741, 803, 923, 1281
FaqI	GGGAC	2 cut(s)	486, 1314
FatI	CATG	7 cut(s)	194, 345, 457, 737, 799, 919, 1277
FauI	CCCGC	2 cut(s)	724, 976
FauNDI	CATATG	1 cut(s)	1158
FbaI	TGATCA	1 cut(s)	750
FblI	GTMKAC	1 cut(s)	577
Fnu4HI	GCNGC	7 cut(s)	114, 165, 174, 393, 1078, 1368, 1371
FokI	GGATG	2 cut(s)	525, 863
FriOI	GRGCYC	1 cut(s)	267
Fsp4HI	GCNGC	7 cut(s)	114, 165, 174, 393, 1078, 1368, 1371
FspBI	CTAG	4 cut(s)	404, 834, 941, 1364
GlaI	GCGC	1 cut(s)	1049
GluI	GCNGC	7 cut(s)	114, 165, 174, 393, 1078, 1368, 1371
GsuI	CTGGAG	1 cut(s)	159
HaeIII	GGCC	3 cut(s)	864, 1224, 1431
HapII	CCGG	1 cut(s)	1244
HhaI	GCGC	1 cut(s)	1050
Hin1I	GRCGYC	1 cut(s)	499
Hin1II	CATG	7 cut(s)	198, 349, 461, 741, 803, 923, 1281
Hin6I	GCGC	1 cut(s)	1048
HinP1I	GCGC	1 cut(s)	1048
HincII	GTYRAC	1 cut(s)	1023
HindII	GTYRAC	1 cut(s)	1023
HindIII	AAGCTT	2 cut(s)	948, 1341
HinfI	GANTC	7 cut(s)	179, 417, 819, 916, 1019, 1190, 1354
HpaII	CCGG	1 cut(s)	1244
HphI	GGTGA	2 cut(s)	710, 814
Hpy166II	GTNNAC	9 cut(s)	210, 351, 578, 587, 619, 938, 1001, 1023, 1283
Hpy188I	TCNGA	1 cut(s)	122
Hpy188III	TCNNGA	5 cut(s)	80, 404, 1097, 1271, 1358
Hpy8I	GTNNAC	9 cut(s)	210, 351, 578, 587, 619, 938, 1001, 1023, 1283
HpyAV	CCTTC	2 cut(s)	323, 1001
HpyCH4III	ACNGT	4 cut(s)	205, 650, 884, 991
HpyCH4IV	ACGT	6 cut(s)	400, 499, 580, 955, 1149, 1303
HpyCH4V	TGCA	7 cut(s)	799, 887, 892, 928, 1241, 1313, 1347
HpyF10VI	GCNNNNNNNGC	9 cut(s)	164, 170, 173, 302, 392, 767, 893, 1247, 1274
HpyF3I	CTNAG	1 cut(s)	313
HpySE526I	ACGT	6 cut(s)	400, 499, 580, 955, 1149, 1303
Hsp92I	GRCGYC	1 cut(s)	499
Hsp92II	CATG	7 cut(s)	198, 349, 461, 741, 803, 923, 1281
HspAI	GCGC	1 cut(s)	1048
Ksp22I	TGATCA	1 cut(s)	750
KspI	CCGCGG	1 cut(s)	1081
Kzo9I	GATC	8 cut(s)	232, 409, 750, 970, 1069, 1176, 1306, 1392
Lsp1109I	GCAGC	6 cut(s)	125, 151, 160, 379, 1354, 1357
LweI	GCATC	1 cut(s)	239
MabI	ACCWGGT	1 cut(s)	1114
MaeI	CTAG	4 cut(s)	404, 834, 941, 1364
MaeII	ACGT	6 cut(s)	400, 499, 580, 955, 1149, 1303
MaeIII	GTNAC	4 cut(s)	3, 124, 236, 337
MalI	GATC	8 cut(s)	234, 411, 752, 972, 1071, 1178, 1308, 1394
MboI	GATC	8 cut(s)	232, 409, 750, 970, 1069, 1176, 1306, 1392
MboII	GAAGA	7 cut(s)	164, 174, 290, 338, 755, 863, 925
MflI	RGATCY	2 cut(s)	409, 1176
MhlI	GDGCHC	1 cut(s)	267
MlsI	TGGCCA	1 cut(s)	1431
MluCI	AATT	8 cut(s)	62, 287, 482, 530, 776, 1202, 1329, 1421
MluNI	TGGCCA	1 cut(s)	1431
MlyI	GAGTC	2 cut(s)	1028, 1363
MmeI	TCCRAC	1 cut(s)	620
MnlI	CCTC	8 cut(s)	141, 364, 400, 432, 465, 1205, 1291, 1312
Mox20I	TGGCCA	1 cut(s)	1431
Mph1103I	ATGCAT	1 cut(s)	801
MscI	TGGCCA	1 cut(s)	1431
MseI	TTAA	4 cut(s)	51, 522, 809, 1401
MslI	CAYNNNNRTG	1 cut(s)	933
Msp20I	TGGCCA	1 cut(s)	1431
MspA1I	CMGCKG	1 cut(s)	1080
MspI	CCGG	1 cut(s)	1244
MspR9I	CCNGG	5 cut(s)	138, 273, 389, 1116, 1245
Mva1269I	GAATGC	2 cut(s)	116, 727
MvaI	CCWGG	4 cut(s)	138, 273, 389, 1116
MvnI	CGCG	4 cut(s)	545, 983, 1050, 1080
MwoI	GCNNNNNNNGC	9 cut(s)	164, 170, 173, 302, 392, 767, 893, 1247, 1274
NciI	CCSGG	1 cut(s)	1245
NdeI	CATATG	1 cut(s)	1158
NdeII	GATC	8 cut(s)	232, 409, 750, 970, 1069, 1176, 1306, 1392
NlaIII	CATG	7 cut(s)	198, 349, 461, 741, 803, 923, 1281
NlaIV	GGNNCC	1 cut(s)	1249
NmeAIII	GCCGAG	1 cut(s)	878
NmuCI	GTSAC	1 cut(s)	3
NsiI	ATGCAT	1 cut(s)	801
NspI	RCATGY	3 cut(s)	349, 741, 1281
OliI	CACNNNNGTG	1 cut(s)	933
PciI	ACATGT	1 cut(s)	345
PctI	GAATGC	2 cut(s)	116, 727
PfeI	GAWTC	5 cut(s)	179, 417, 819, 916, 1190
PflMI	CCANNNNNTGG	1 cut(s)	458
PfoI	TCCNGGA	1 cut(s)	271
PkrI	GCNGC	7 cut(s)	115, 166, 175, 394, 1079, 1369, 1372
PleI	GAGTC	2 cut(s)	1027, 1362
PpsI	GAGTC	2 cut(s)	1027, 1362
Ppu21I	YACGTR	1 cut(s)	581
PscI	ACATGT	1 cut(s)	345
PsiI	TTATAA	1 cut(s)	678
Psp6I	CCWGG	4 cut(s)	136, 271, 387, 1114
PspGI	CCWGG	4 cut(s)	136, 271, 387, 1114
PspN4I	GGNNCC	1 cut(s)	1249
PspPI	GGNCC	2 cut(s)	210, 449
PstNI	CAGNNNCTG	1 cut(s)	164
PsuI	RGATCY	2 cut(s)	409, 1176
RsaI	GTAC	7 cut(s)	193, 517, 736, 939, 988, 1197, 1284
RsaNI	GTAC	7 cut(s)	192, 516, 735, 938, 987, 1196, 1283
RseI	CAYNNNNRTG	1 cut(s)	933
SacII	CCGCGG	1 cut(s)	1081
SaqAI	TTAA	4 cut(s)	51, 522, 809, 1401
SatI	GCNGC	7 cut(s)	114, 165, 174, 393, 1078, 1368, 1371
Sau3AI	GATC	8 cut(s)	232, 409, 750, 970, 1069, 1176, 1306, 1392
Sau96I	GGNCC	2 cut(s)	210, 449
SchI	GAGTC	2 cut(s)	1028, 1363
ScrFI	CCNGG	5 cut(s)	138, 273, 389, 1116, 1245
SduI	GDGCHC	1 cut(s)	267
SexAI	ACCWGGT	1 cut(s)	1114
SfaNI	GCATC	1 cut(s)	239
Sfr303I	CCGCGG	1 cut(s)	1081
SgrBI	CCGCGG	1 cut(s)	1081
SinI	GGWCC	2 cut(s)	210, 449
SmiMI	CAYNNNNRTG	1 cut(s)	933
SmlI	CTYRAG	1 cut(s)	1095
SmoI	CTYRAG	1 cut(s)	1095
SpeI	ACTAGT	1 cut(s)	833
Sse9I	AATT	8 cut(s)	62, 287, 482, 530, 776, 1202, 1329, 1421
SsiI	CCGC	7 cut(s)	167, 543, 731, 825, 983, 1078, 1080
SspMI	CTAG	4 cut(s)	404, 834, 941, 1364
StyD4I	CCNGG	5 cut(s)	136, 271, 387, 1114, 1243
StyI	CCWWGG	3 cut(s)	93, 445, 1229
TaaI	ACNGT	4 cut(s)	205, 650, 884, 991
TaiI	ACGT	6 cut(s)	403, 502, 583, 958, 1152, 1306
TaqI	TCGA	5 cut(s)	261, 356, 1072, 1317, 1416
TaqII	GACCGA	2 cut(s)	227, 1187
TasI	AATT	8 cut(s)	62, 287, 482, 530, 776, 1202, 1329, 1421
TatI	WGTACW	4 cut(s)	515, 937, 1195, 1282
TauI	GCSGC	1 cut(s)	1080
TfiI	GAWTC	5 cut(s)	179, 417, 819, 916, 1190
Tru1I	TTAA	4 cut(s)	51, 522, 809, 1401
Tru9I	TTAA	4 cut(s)	51, 522, 809, 1401
TseFI	GTSAC	1 cut(s)	3
TseI	GCWGC	6 cut(s)	113, 164, 173, 392, 1367, 1370
Tsp45I	GTSAC	1 cut(s)	3
TspDTI	ATGAA	3 cut(s)	102, 585, 1341
TspGWI	ACGGA	2 cut(s)	923, 1325
Van91I	CCANNNNNTGG	1 cut(s)	458
VpaK11BI	GGWCC	2 cut(s)	210, 449
XbaI	TCTAGA	1 cut(s)	403
XceI	RCATGY	3 cut(s)	349, 741, 1281
XcmI	CCANNNNNNNNNTGG	1 cut(s)	636
XmiI	GTMKAC	1 cut(s)	577
XspI	CTAG	4 cut(s)	404, 834, 941, 1364
ZraI	GACGTC	1 cut(s)	500
Zsp2I	ATGCAT	1 cut(s)	801

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.