Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0006040

Physical Location & Seq

Genomic Coordinates Forward (+)

681967 .. 684656

Gene Structure 2690 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000000350

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCGGAGTATGAAACCAAAGATACTGATATCTTGGCAGCATTTCGAGTAACTCCTCAACCTGGAGTTCCGCCTGAGGAAGCGGGGGCAGCGGTAGCTGCGGAATCTTCTACTGGTACATGGACAACTGTATGGACTGATGGGCTTACCAGTCTTGATCGTTACAAAGGGCGATGCTACCACATTGAACCTGTTGCTGGAGAAGAAAGTCAATTTATTGCTTATGTAGCTTACCCCTTAGACCTTTTTGAAGAGGGTTCGGTTACTAACATGTTTACTTCCATTGTAGGTAATGTGTTTGGGTTCAAGGCCTTGCGCGCTCTACGTCTGGAGGATTTACGAATCCCTACTGCTTATGTTAAAACTTTCCAAGGCCCGCCTCACGGGATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGCCGCCCCCTATTGGGATGTACTATTAAACCTAAATTGGGGTTATCCGCTAAGAATTACGGTAGAGCAGTTTATGAATGTCTCCGCGGTGGACTTGATTTTACCAAAGATGATGAGAATGTTAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCTTATTTTGTGCCGAAGCACTTTATAAAGCGCAGGCTGAAACAGGTGAAATCAAAGGGCATTACTTGAATGCTACTGCAGGTACATGCGAAGATATGATGAAAAGAGCCGTATTTGCCAGAGAATTGGGAGTTCCTATCGTAATGCACGATTACTTAACGGGGGGATTCACTGCAAATACTACCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATCCACCGTGCAATGCATGCTGTTATTGATAGACAGAAGAATCATGGTATGCACTTTCGTGTACTAGCTAAAGCATTACGTATGTCTGGTGGAGATCATATCCACGCCGGTACCGTAGTAGGTAAACTTGAGGGGGAAAGAGACATCACTTTAGGCTTTGTTGATTTACTACGTGATGATTATATTGAAAAAGACCGAAGCCGCGGTATTTATTTTACTCAAGATTGGGTTTCTTTACCGGGTGTTTTACCTGTGGCTTCCGGGGGTATTCACGTTTGGCATATGCCTGCTCTGACCGAGATCTTTGGAGATGATTCTGTACTACAATTCGGTGGAGGAACTTTAGGACACCCTTGGGGAAATGCACCAGGTGCCGTAGCTAATCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTCGCTCGTGAGGGTAATGAAATTATTCGTGAGGCTAGTAAATGGAGTCCTGAACTAGCTGCCGCTTGTGAGGTATGGAAAGAGATCAAATTTGAATTCGAAGCAATGGATACTTTGGATCGCCGCGAGTCCCCTTTCTACTCGGAATCAAACGCCAATTTTTTGCCGGGCCAACAGCAAAATGAGCAGTTGGATCAGCATCAGCGTAGCTTGCTGCACCCCGAAGCTCTTCAGTTAGAAGAGAGCATCCTTGTGCGGGAGGTGAGTTGCAAGAGCCAGCAACTCGATCACGATCCATTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00061 ko00620 ko00630 ko00640 ko00710 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko01212 map00061 map00620 map00630 map00640 map00710 map00720 map01100 map01110 map01120 map01130 map01200 map01212

Pfam Domains

Protein Families

RuBisCO_large RuBisCO_large_N

Protein Analysis

537

Amino Acids

59.81

Weight (kDa)

5.74

Isoelectric Point (pI)

47.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RuBisCO_large_N	PF02788	24 - 144	7.6e-43	Ribulose bisphosphate carboxylase large chain, N-terminal domain
RuBisCO_large	PF00016	154 - 462	6.4e-138	Ribulose bisphosphate carboxylase large chain, catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006040)

Species	Orthologous Gene IDs
arabidopsis_thaliana	ATCG00490
malus_domestica	MD02G1049600.v1.1 MD11G1294900.v1.1 MD11G1295000.v1.1
prunus_persica	Prupe.7G029600_v2.0.a1
pyrus_communis	pycom08g13270 pycom12397g00250
rosa_chinensis	RchiOBHm_Chr5g0043011 RchiOBHm_CPg0502111
rosa_laevigata	RLG00000000069 RLG00000000106 RLG00000000163 RLG00000000221 RLG00000000257 RLG00000000267 RLG00000000290 RLG00000000329 RLG00000000350 RLG00000037105
rosa_roxburghii	Rroxscaffold_2G00087120 Rroxscaffold_3G00220720
rosa_rugosa	RorugMtG0002400.1
rosa_samantha	Rh2AG282300 Rh2BG293600 Rh2DG288500 Rh5BG295000 Rh5DG304800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	60, 678
Acc36I	ACCTGC	1 cut(s)	722
Acc65I	GGTACC	1 cut(s)	986
AccB1I	GGYRCC	2 cut(s)	986, 1247
AccI	GTMKAC	1 cut(s)	865
AccII	CGCG	4 cut(s)	393, 582, 1080, 1434
AccIII	TCCGGA	1 cut(s)	79
AclWI	GGATC	5 cut(s)	457, 470, 1434, 1509, 1595
AcoI	YGGCCR	1 cut(s)	496
AcsI	RAATTY	2 cut(s)	1397, 1403
AcuI	CTGAAG	1 cut(s)	1523
AdeI	CACNNNGTG	1 cut(s)	1247
AfaI	GTAC	7 cut(s)	193, 517, 736, 939, 988, 1197, 1284
AfiI	CCNNNNNNNGG	7 cut(s)	137, 272, 458, 508, 509, 533, 1564
AflIII	ACRYGT	1 cut(s)	345
AgsI	TTSAA	9 cut(s)	40, 263, 326, 382, 473, 487, 721, 1064, 1403
AjiI	CACGTC	1 cut(s)	1304
AjnI	CCWGG	2 cut(s)	136, 1243
AleI	CACNNNNGTG	1 cut(s)	933
Alw26I	GTCTC	4 cut(s)	11, 581, 639, 1011
AlwI	GGATC	5 cut(s)	457, 470, 1434, 1509, 1595
Aor13HI	TCCGGA	1 cut(s)	79
AoxI	GGCC	4 cut(s)	384, 448, 496, 1477
ApeKI	GCWGC	5 cut(s)	113, 164, 173, 1367, 1522
ApoI	RAATTY	2 cut(s)	1397, 1403
Asp700I	GAANNNNTTC	2 cut(s)	1332, 1536
Asp718I	GGTACC	1 cut(s)	986
AspLEI	GCGC	3 cut(s)	393, 395, 685
AspS9I	GGNCC	2 cut(s)	449, 1477
AsuC2I	CCSGG	3 cut(s)	1116, 1138, 1476
AsuHPI	GGTGA	2 cut(s)	710, 1582
AsuII	TTCGAA	1 cut(s)	1407
AxyI	CCTNAGG	1 cut(s)	150
BaeI	ACNNNNGTAYC	4 cut(s)	970, 978, 1003, 1011
BamHI	GGATCC	1 cut(s)	462
BanI	GGYRCC	2 cut(s)	986, 1247
BarI	GAAGNNNNNNTAC	2 cut(s)	1266, 1298
BauI	CACGAG	1 cut(s)	1314
BbvI	GCAGC	5 cut(s)	125, 160, 176, 1354, 1509
BccI	CCATC	1 cut(s)	209
BceAI	ACGGC	2 cut(s)	746, 1235
BciT130I	CCWGG	2 cut(s)	138, 1245
BciVI	GTATCC	1 cut(s)	1411
BcnI	CCSGG	3 cut(s)	1116, 1138, 1476
BcoDI	GTCTC	4 cut(s)	11, 581, 639, 1011
BfaI	CTAG	4 cut(s)	941, 1271, 1344, 1364
BfmI	CTRYAG	1 cut(s)	729
BfuAI	ACCTGC	1 cut(s)	722
BfuI	GTATCC	1 cut(s)	1411
BglII	AGATCT	1 cut(s)	1176
BisI	GCNGC	9 cut(s)	114, 165, 174, 499, 1078, 1368, 1371, 1432, 1523
BlsI	GCNGC	9 cut(s)	115, 166, 175, 500, 1079, 1369, 1372, 1433, 1524
Bme1390I	CCNGG	5 cut(s)	138, 1116, 1138, 1245, 1476
BmgBI	CACGTC	1 cut(s)	1304
BmgT120I	GGNCC	2 cut(s)	449, 1477
BmiI	GGNNCC	3 cut(s)	464, 988, 1249
BmrFI	CCNGG	5 cut(s)	138, 1116, 1138, 1245, 1476
BmsI	GCATC	3 cut(s)	239, 1516, 1563
BpmI	CTGGAG	3 cut(s)	159, 294, 425
Bpu14I	TTCGAA	1 cut(s)	1407
BpuEI	CTTGAG	2 cut(s)	1025, 1080
BpuMI	CCSGG	3 cut(s)	1116, 1138, 1476
BsaAI	YACGTR	2 cut(s)	956, 1049
BsaBI	GATNNNNATC	2 cut(s)	1506, 1599
BsaI	GGTCTC	1 cut(s)	639
BsaJI	CCNNGG	6 cut(s)	445, 580, 837, 1078, 1137, 1229
BsaWI	WCCGGW	1 cut(s)	79
BsaXI	ACNNNNNCTCC	2 cut(s)	634, 664
Bsc4I	CCNNNNNNNGG	7 cut(s)	137, 272, 458, 508, 509, 533, 1564
Bse118I	RCCGGY	1 cut(s)	983
Bse1I	ACTGG	2 cut(s)	193, 225
Bse21I	CCTNAGG	1 cut(s)	150
Bse3DI	GCAATG	2 cut(s)	894, 1419
Bse8I	GATNNNNATC	2 cut(s)	1506, 1599
BseAI	TCCGGA	1 cut(s)	79
BseBI	CCWGG	2 cut(s)	138, 1245
BseDI	CCNNGG	6 cut(s)	445, 580, 837, 1078, 1137, 1229
BseGI	GGATG	3 cut(s)	518, 876, 1554
BseJI	GATNNNNATC	2 cut(s)	1506, 1599
BseLI	CCNNNNNNNGG	7 cut(s)	137, 272, 458, 508, 509, 533, 1564
BseMI	GCAATG	2 cut(s)	894, 1419
BseMII	CTCAG	1 cut(s)	141
BseNI	ACTGG	2 cut(s)	193, 225
BsePI	GCGCGC	1 cut(s)	391
BseRI	GAGGAG	1 cut(s)	120
BseXI	GCAGC	5 cut(s)	125, 160, 176, 1354, 1509
BsgI	GTGCAG	1 cut(s)	1508
Bsh1236I	CGCG	4 cut(s)	393, 582, 1080, 1434
BshFI	GGCC	4 cut(s)	386, 450, 498, 1479
BshNI	GGYRCC	2 cut(s)	986, 1247
BsiSI	CCGG	5 cut(s)	80, 984, 1115, 1137, 1475
BslFI	GGGAC	2 cut(s)	1314, 1423
BslI	CCNNNNNNNGG	7 cut(s)	137, 272, 458, 508, 509, 533, 1564
BsmAI	GTCTC	4 cut(s)	11, 581, 639, 1011
BsmFI	GGGAC	2 cut(s)	1314, 1423
BsmI	GAATGC	1 cut(s)	727
BsnI	GGCC	4 cut(s)	386, 450, 498, 1479
Bso31I	GGTCTC	1 cut(s)	639
Bsp119I	TTCGAA	1 cut(s)	1407
Bsp13I	TCCGGA	1 cut(s)	79
Bsp1407I	TGTACA	1 cut(s)	1282
BspANI	GGCC	4 cut(s)	386, 450, 498, 1479
BspCNI	CTCAG	1 cut(s)	142
BspEI	TCCGGA	1 cut(s)	79
BspFNI	CGCG	4 cut(s)	393, 582, 1080, 1434
BspLI	GGNNCC	3 cut(s)	464, 988, 1249
BspMAI	CTGCAG	1 cut(s)	733
BspMI	ACCTGC	1 cut(s)	722
BspPI	GGATC	5 cut(s)	457, 470, 1434, 1509, 1595
BspQI	GCTCTTC	1 cut(s)	1542
BspT104I	TTCGAA	1 cut(s)	1407
BspT107I	GGYRCC	2 cut(s)	986, 1247
BspTNI	GGTCTC	1 cut(s)	639
BsrDI	GCAATG	2 cut(s)	894, 1419
BsrFI	RCCGGY	1 cut(s)	983
BsrGI	TGTACA	1 cut(s)	1282
BsrI	ACTGG	2 cut(s)	193, 225
BssAI	RCCGGY	1 cut(s)	983
BssECI	CCNNGG	6 cut(s)	445, 580, 837, 1078, 1137, 1229
BssHII	GCGCGC	1 cut(s)	391
BssSI	CACGAG	1 cut(s)	1314
BssT1I	CCWWGG	3 cut(s)	445, 837, 1229
Bst2BI	CACGAG	1 cut(s)	1314
Bst2UI	CCWGG	2 cut(s)	138, 1245
Bst4CI	ACNGT	5 cut(s)	205, 557, 650, 884, 991
Bst6I	CTCTTC	3 cut(s)	321, 1542, 1542
BstAPI	GCANNNNNTGC	2 cut(s)	893, 1247
BstAUI	TGTACA	1 cut(s)	1282
BstBAI	YACGTR	2 cut(s)	956, 1049
BstBI	TTCGAA	1 cut(s)	1407
BstC8I	GCNNGC	7 cut(s)	393, 452, 687, 894, 1164, 1520, 1586
BstDEI	CTNAG	3 cut(s)	150, 313, 546
BstDSI	CCRYGG	2 cut(s)	580, 1078
BstF5I	GGATG	3 cut(s)	518, 876, 1554
BstFNI	CGCG	4 cut(s)	393, 582, 1080, 1434
BstHHI	GCGC	3 cut(s)	393, 395, 685
BstMAI	GTCTC	4 cut(s)	11, 581, 639, 1011
BstNI	CCWGG	2 cut(s)	138, 1245
BstNSI	RCATGY	4 cut(s)	349, 741, 896, 1281
BstSCI	CCNGG	5 cut(s)	136, 1114, 1136, 1243, 1474
BstSFI	CTRYAG	1 cut(s)	729
BstSNI	TACGTA	1 cut(s)	956
BstUI	CGCG	4 cut(s)	393, 582, 1080, 1434
BstV1I	GCAGC	5 cut(s)	125, 160, 176, 1354, 1509
BstX2I	RGATCY	2 cut(s)	462, 1176
BstXI	CCANNNNNNTGG	1 cut(s)	778
BstYI	RGATCY	2 cut(s)	462, 1176
Bsu36I	CCTNAGG	1 cut(s)	150
BsuI	GTATCC	1 cut(s)	1411
BsuRI	GGCC	4 cut(s)	386, 450, 498, 1479
BtgI	CCRYGG	2 cut(s)	580, 1078
BtgZI	GCGATG	1 cut(s)	262
BtrI	CACGTC	1 cut(s)	1304
BtsCI	GGATG	3 cut(s)	518, 876, 1554
BtsI	GCAGTG	1 cut(s)	822
BtsIMutI	CAGTG	1 cut(s)	822
BveI	ACCTGC	1 cut(s)	722
Cac8I	GCNNGC	7 cut(s)	393, 452, 687, 894, 1164, 1520, 1586
CfoI	GCGC	3 cut(s)	393, 395, 685
Cfr10I	RCCGGY	1 cut(s)	983
Cfr13I	GGNCC	2 cut(s)	449, 1477
Cfr42I	CCGCGG	2 cut(s)	583, 1081
CsiI	ACCWGGT	1 cut(s)	1243
Csp6I	GTAC	7 cut(s)	192, 516, 735, 938, 987, 1196, 1283
CviAII	CATG	6 cut(s)	195, 346, 738, 893, 920, 1278
CviQI	GTAC	7 cut(s)	192, 516, 735, 938, 987, 1196, 1283
DdeI	CTNAG	3 cut(s)	150, 313, 546
DraIII	CACNNNGTG	1 cut(s)	1247
EaeI	YGGCCR	1 cut(s)	496
Eam1104I	CTCTTC	3 cut(s)	321, 1542, 1542
EarI	CTCTTC	3 cut(s)	321, 1542, 1542
EciI	GGCGGA	1 cut(s)	135
Eco105I	TACGTA	1 cut(s)	956
Eco130I	CCWWGG	3 cut(s)	445, 837, 1229
Eco147I	AGGCCT	1 cut(s)	386
Eco31I	GGTCTC	1 cut(s)	639
Eco32I	GATATC	1 cut(s)	106
Eco57I	CTGAAG	1 cut(s)	1523
Eco81I	CCTNAGG	1 cut(s)	150
EcoRI	GAATTC	1 cut(s)	1403
EcoRII	CCWGG	2 cut(s)	136, 1243
EcoRV	GATATC	1 cut(s)	106
EcoT14I	CCWWGG	3 cut(s)	445, 837, 1229
EcoT22I	ATGCAT	1 cut(s)	894
ErhI	CCWWGG	3 cut(s)	445, 837, 1229
FaeI	CATG	6 cut(s)	198, 349, 741, 896, 923, 1281
FaqI	GGGAC	2 cut(s)	1314, 1423
FatI	CATG	6 cut(s)	194, 345, 737, 892, 919, 1277
FauI	CCCGC	3 cut(s)	151, 459, 1557
FauNDI	CATATG	1 cut(s)	1158
FblI	GTMKAC	1 cut(s)	865
Fnu4HI	GCNGC	9 cut(s)	114, 165, 174, 499, 1078, 1368, 1371, 1432, 1523
FokI	GGATG	3 cut(s)	525, 863, 1541
Fsp4HI	GCNGC	9 cut(s)	114, 165, 174, 499, 1078, 1368, 1371, 1432, 1523
FspBI	CTAG	4 cut(s)	941, 1271, 1344, 1364
GlaI	GCGC	3 cut(s)	392, 394, 684
GluI	GCNGC	9 cut(s)	114, 165, 174, 499, 1078, 1368, 1371, 1432, 1523
GsuI	CTGGAG	3 cut(s)	159, 294, 425
HaeIII	GGCC	4 cut(s)	386, 450, 498, 1479
HapII	CCGG	5 cut(s)	80, 984, 1115, 1137, 1475
HhaI	GCGC	3 cut(s)	393, 395, 685
Hin1II	CATG	6 cut(s)	198, 349, 741, 896, 923, 1281
Hin6I	GCGC	3 cut(s)	391, 393, 683
HinP1I	GCGC	3 cut(s)	391, 393, 683
HinfI	GANTC	9 cut(s)	36, 179, 417, 819, 916, 1190, 1354, 1436, 1454
HpaII	CCGG	5 cut(s)	80, 984, 1115, 1137, 1475
HphI	GGTGA	2 cut(s)	710, 1582
Hpy166II	GTNNAC	6 cut(s)	351, 587, 866, 938, 1001, 1283
Hpy188I	TCNGA	2 cut(s)	1170, 1453
Hpy188III	TCNNGA	9 cut(s)	80, 230, 404, 1097, 1271, 1316, 1337, 1358, 1598
Hpy8I	GTNNAC	6 cut(s)	351, 587, 866, 938, 1001, 1283
HpyCH4III	ACNGT	5 cut(s)	205, 557, 650, 884, 991
HpyCH4IV	ACGT	5 cut(s)	400, 955, 1048, 1149, 1303
HpyCH4V	TGCA	9 cut(s)	731, 799, 827, 887, 892, 928, 1241, 1525, 1578
HpyF3I	CTNAG	3 cut(s)	150, 313, 546
HpySE526I	ACGT	5 cut(s)	400, 955, 1048, 1149, 1303
Hsp92II	CATG	6 cut(s)	198, 349, 741, 896, 923, 1281
HspAI	GCGC	3 cut(s)	391, 393, 683
Kpn2I	TCCGGA	1 cut(s)	79
KpnI	GGTACC	1 cut(s)	990
KspI	CCGCGG	2 cut(s)	583, 1081
LguI	GCTCTTC	1 cut(s)	1542
Lsp1109I	GCAGC	5 cut(s)	125, 160, 176, 1354, 1509
LweI	GCATC	3 cut(s)	239, 1516, 1563
MabI	ACCWGGT	1 cut(s)	1243
MaeI	CTAG	4 cut(s)	941, 1271, 1344, 1364
MaeII	ACGT	5 cut(s)	400, 955, 1048, 1149, 1303
MaeIII	GTNAC	4 cut(s)	3, 124, 236, 337
MboII	GAAGA	8 cut(s)	174, 290, 338, 755, 863, 925, 1529, 1559
MflI	RGATCY	2 cut(s)	462, 1176
MlyI	GAGTC	2 cut(s)	1363, 1445
MmeI	TCCRAC	3 cut(s)	13, 620, 1479
Mph1103I	ATGCAT	1 cut(s)	894
MroI	TCCGGA	1 cut(s)	79
MroXI	GAANNNNTTC	2 cut(s)	1332, 1536
MseI	TTAA	5 cut(s)	51, 435, 522, 618, 809
MslI	CAYNNNNRTG	2 cut(s)	933, 1559
MspA1I	CMGCKG	3 cut(s)	167, 582, 1080
MspI	CCGG	5 cut(s)	80, 984, 1115, 1137, 1475
MspR9I	CCNGG	5 cut(s)	138, 1116, 1138, 1245, 1476
Mva1269I	GAATGC	1 cut(s)	727
MvaI	CCWGG	2 cut(s)	138, 1245
MvnI	CGCG	4 cut(s)	393, 582, 1080, 1434
NciI	CCSGG	3 cut(s)	1116, 1138, 1476
NdeI	CATATG	1 cut(s)	1158
NlaIII	CATG	6 cut(s)	198, 349, 741, 896, 923, 1281
NlaIV	GGNNCC	3 cut(s)	464, 988, 1249
NmeAIII	GCCGAG	1 cut(s)	878
NmuCI	GTSAC	1 cut(s)	3
NsiI	ATGCAT	1 cut(s)	894
NspI	RCATGY	4 cut(s)	349, 741, 896, 1281
NspV	TTCGAA	1 cut(s)	1407
OliI	CACNNNNGTG	1 cut(s)	933
PaeI	GCATGC	1 cut(s)	896
PauI	GCGCGC	1 cut(s)	391
PceI	AGGCCT	1 cut(s)	386
PciI	ACATGT	1 cut(s)	345
PciSI	GCTCTTC	1 cut(s)	1542
PcsI	WCGNNNNNNNCGW	2 cut(s)	798, 987
PctI	GAATGC	1 cut(s)	727
PdmI	GAANNNNTTC	2 cut(s)	1332, 1536
PfeI	GAWTC	7 cut(s)	36, 179, 417, 819, 916, 1190, 1454
PkrI	GCNGC	9 cut(s)	115, 166, 175, 500, 1079, 1369, 1372, 1433, 1524
PleI	GAGTC	2 cut(s)	1362, 1444
PpsI	GAGTC	2 cut(s)	1362, 1444
Ppu21I	YACGTR	2 cut(s)	956, 1049
PscI	ACATGT	1 cut(s)	345
PsiI	TTATAA	2 cut(s)	60, 678
Psp6I	CCWGG	2 cut(s)	136, 1243
PspGI	CCWGG	2 cut(s)	136, 1243
PspN4I	GGNNCC	3 cut(s)	464, 988, 1249
PspPI	GGNCC	2 cut(s)	449, 1477
PstI	CTGCAG	1 cut(s)	733
PsuI	RGATCY	2 cut(s)	462, 1176
PteI	GCGCGC	1 cut(s)	391
RsaI	GTAC	7 cut(s)	193, 517, 736, 939, 988, 1197, 1284
RsaNI	GTAC	7 cut(s)	192, 516, 735, 938, 987, 1196, 1283
RseI	CAYNNNNRTG	2 cut(s)	933, 1559
SacII	CCGCGG	2 cut(s)	583, 1081
SapI	GCTCTTC	1 cut(s)	1542
SaqAI	TTAA	5 cut(s)	51, 435, 522, 618, 809
SatI	GCNGC	9 cut(s)	114, 165, 174, 499, 1078, 1368, 1371, 1432, 1523
Sau96I	GGNCC	2 cut(s)	449, 1477
SchI	GAGTC	2 cut(s)	1363, 1445
ScrFI	CCNGG	5 cut(s)	138, 1116, 1138, 1245, 1476
SexAI	ACCWGGT	1 cut(s)	1243
SfaNI	GCATC	3 cut(s)	239, 1516, 1563
SfcI	CTRYAG	1 cut(s)	729
Sfr303I	CCGCGG	2 cut(s)	583, 1081
SfuI	TTCGAA	1 cut(s)	1407
SgrBI	CCGCGG	2 cut(s)	583, 1081
SmiMI	CAYNNNNRTG	2 cut(s)	933, 1559
SmlI	CTYRAG	2 cut(s)	1004, 1095
SmoI	CTYRAG	2 cut(s)	1004, 1095
SnaBI	TACGTA	1 cut(s)	956
SphI	GCATGC	1 cut(s)	896
SseBI	AGGCCT	1 cut(s)	386
SspMI	CTAG	4 cut(s)	941, 1271, 1344, 1364
StuI	AGGCCT	1 cut(s)	386
StyD4I	CCNGG	5 cut(s)	136, 1114, 1136, 1243, 1474
StyI	CCWWGG	3 cut(s)	445, 837, 1229
TaaI	ACNGT	5 cut(s)	205, 557, 650, 884, 991
TaiI	ACGT	5 cut(s)	403, 958, 1051, 1152, 1306
TaqI	TCGA	4 cut(s)	121, 1261, 1407, 1593
TaqII	GACCGA	2 cut(s)	1086, 1187
TatI	WGTACW	4 cut(s)	515, 937, 1195, 1282
TauI	GCSGC	4 cut(s)	501, 1080, 1373, 1434
TfiI	GAWTC	7 cut(s)	36, 179, 417, 819, 916, 1190, 1454
Tru1I	TTAA	5 cut(s)	51, 435, 522, 618, 809
Tru9I	TTAA	5 cut(s)	51, 435, 522, 618, 809
TscAI	CASTG	1 cut(s)	829
TseFI	GTSAC	1 cut(s)	3
TseI	GCWGC	5 cut(s)	113, 164, 173, 1367, 1522
Tsp45I	GTSAC	1 cut(s)	3
TspDTI	ATGAA	4 cut(s)	102, 585, 767, 1341
TspRI	CASTG	1 cut(s)	829
XapI	RAATTY	2 cut(s)	1397, 1403
XbaI	TCTAGA	1 cut(s)	1270
XceI	RCATGY	4 cut(s)	349, 741, 896, 1281
XcmI	CCANNNNNNNNNTGG	1 cut(s)	636
XmiI	GTMKAC	1 cut(s)	865
XmnI	GAANNNNTTC	2 cut(s)	1332, 1536
XspI	CTAG	4 cut(s)	941, 1271, 1344, 1364
Zsp2I	ATGCAT	1 cut(s)	894

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.