Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0006040

Physical Location & Seq

Genomic Coordinates Reverse (-)

607777 .. 609204

Gene Structure 1428 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000000329

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1347 bp

ATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCGGAGTATGAAACCAAAGATACTGATATCTTGGCAGCATTTCGAGTAACTCCTCAACCTGGAGTTCCGCCTGAGGAAGCGGGGGCAGCGGTAGCTGCGGAATCTTCTACTGGTACATGGACAACTGTATGGACTGATGGGCTTACCAGTCTTGATCGTTACAAAGGGCGATGCTACCACATTGAACCTGTTGCTGGAGAAGAAAGTAATGTGTTTGGGTTCAAGGCCTTGCGCGCTCTACGTCTGGAGGATTTACGAATCCCTACTGCTTATGTTAAAACTTTCCAAGGCCCGCCTCACGGGATCCAAGTTGAAAGAGATAAATTGAACAAGTATGGCCGCCCCCTATTGGGATGTACTATTAAACCTAAATTGGGGTTATCCGCTAAGAATTACGGTAGAGCAGTTTATGAATGTCTCCGCGGTGGACTTGATTTTACCAAAGATGATGAGAATGTTAATTCCCAACCATTTATGCGTTGGAGAGACCGTTTCTTATTTTGTGCCGAAGCACTTTATAAAGCGCAGGCTGAAACAGGTGAAATCAAAGGGCATTACTTGAATGCTACTGCAGGTACATGCGAAGATATGATGAAAAGAGCCGTATTTGCCAGAGAATTGGGAGTTCCTATCGTAATGCACGATTACTTAACGGGGGGATTCACTGCAAATACTACCTTGGCTCATTATTGCCGAGATAATGGTCTACTTCTTCACATCCACCGTGCAATGCATGCTGTTATTGATAGACAGAAGAATCATGGTATGCACTTTCGTGTACTAGCTAAAGCATTACGTATGTCTGGTGGAGATCATATCCACGCCGGTACCGTAGTAGGTAAACTTGAGGGGGAAAGAGACATCACTTTAGGCTTTGTTGATTTACTACGTGATGATTATATTGAAAAAGACCGAAGCCGCGGTATTTATTTTACTCAAGATTGGGTTTCTTTACCGGGTGTTTTACCTGTGGCTTCCGGGGGTATTCACGTTTGGCATATGCCTGCTCTGACCGAGATCTTTGGAGATGATTCTGTACTACAATTCGGTGGAGGAACTTTAGGACACCCTTGGGGAAATGCACCAGGTGCCGTAGCTAATCGAGTAGCTCTAGAAGCATGTGTACAAGCTCGTAATGAGGGACGTGATCTCGCTCGTGAGGGTAATGAAATTATTCGTGAGGCTAGTAAATGGAGTCCTGAACTAGCTGCCGCTTGTGAGGTATGGAAAGAGATCAAATTTGAATTCGAAGCAATGGATACTTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0009507 GO:0009536 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464

KEGG Pathways

Metabolic & Signaling

ko00061 ko00620 ko00630 ko00640 ko00710 ko00720 ko01100 ko01110 ko01120 ko01130 ko01200 ko01212 map00061 map00620 map00630 map00640 map00710 map00720 map01100 map01110 map01120 map01130 map01200 map01212

Pfam Domains

Protein Families

RuBisCO_large RuBisCO_large_N

Protein Analysis

449

Amino Acids

49.7

Weight (kDa)

6.33

Isoelectric Point (pI)

43.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RuBisCO_large_N	PF02788	24 - 93	1.5e-20	Ribulose bisphosphate carboxylase large chain, N-terminal domain
RuBisCO_large	PF00016	127 - 435	3.8e-138	Ribulose bisphosphate carboxylase large chain, catalytic domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006040)

Species	Orthologous Gene IDs
arabidopsis_thaliana	ATCG00490
malus_domestica	MD02G1049600.v1.1 MD11G1294900.v1.1 MD11G1295000.v1.1
prunus_persica	Prupe.7G029600_v2.0.a1
pyrus_communis	pycom08g13270 pycom12397g00250
rosa_chinensis	RchiOBHm_Chr5g0043011 RchiOBHm_CPg0502111
rosa_laevigata	RLG00000000069 RLG00000000106 RLG00000000163 RLG00000000221 RLG00000000257 RLG00000000267 RLG00000000290 RLG00000000329 RLG00000000350 RLG00000037105
rosa_roxburghii	Rroxscaffold_2G00087120 Rroxscaffold_3G00220720
rosa_rugosa	RorugMtG0002400.1
rosa_samantha	Rh2AG282300 Rh2BG293600 Rh2DG288500 Rh5BG295000 Rh5DG304800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	60, 597
Acc36I	ACCTGC	1 cut(s)	641
Acc65I	GGTACC	1 cut(s)	905
AccB1I	GGYRCC	2 cut(s)	905, 1166
AccI	GTMKAC	1 cut(s)	784
AccII	CGCG	3 cut(s)	312, 501, 999
AccIII	TCCGGA	1 cut(s)	79
AclWI	GGATC	2 cut(s)	376, 389
AcoI	YGGCCR	1 cut(s)	415
AcsI	RAATTY	2 cut(s)	1316, 1322
AdeI	CACNNNGTG	1 cut(s)	1166
AfaI	GTAC	7 cut(s)	193, 436, 655, 858, 907, 1116, 1203
AfiI	CCNNNNNNNGG	6 cut(s)	137, 272, 377, 427, 428, 452
AgsI	TTSAA	8 cut(s)	40, 263, 301, 392, 406, 640, 983, 1322
AjiI	CACGTC	1 cut(s)	1223
AjnI	CCWGG	2 cut(s)	136, 1162
AleI	CACNNNNGTG	1 cut(s)	852
AluBI	AGCT	7 cut(s)	44, 173, 863, 1175, 1187, 1208, 1286
AluI	AGCT	7 cut(s)	44, 173, 863, 1175, 1187, 1208, 1286
Alw26I	GTCTC	4 cut(s)	11, 500, 558, 930
AlwI	GGATC	2 cut(s)	376, 389
Aor13HI	TCCGGA	1 cut(s)	79
AoxI	GGCC	3 cut(s)	303, 367, 415
ApeKI	GCWGC	4 cut(s)	113, 164, 173, 1286
ApoI	RAATTY	2 cut(s)	1316, 1322
Asp700I	GAANNNNTTC	1 cut(s)	1251
Asp718I	GGTACC	1 cut(s)	905
AspLEI	GCGC	3 cut(s)	312, 314, 604
AspS9I	GGNCC	1 cut(s)	368
AsuC2I	CCSGG	2 cut(s)	1035, 1057
AsuHPI	GGTGA	1 cut(s)	629
AsuII	TTCGAA	1 cut(s)	1326
AxyI	CCTNAGG	1 cut(s)	150
BaeI	ACNNNNGTAYC	4 cut(s)	889, 897, 922, 930
BamHI	GGATCC	1 cut(s)	381
BanI	GGYRCC	2 cut(s)	905, 1166
BarI	GAAGNNNNNNTAC	2 cut(s)	1185, 1217
BauI	CACGAG	1 cut(s)	1233
BbvI	GCAGC	4 cut(s)	125, 160, 176, 1273
BccI	CCATC	1 cut(s)	209
BceAI	ACGGC	2 cut(s)	665, 1154
BciT130I	CCWGG	2 cut(s)	138, 1164
BciVI	GTATCC	1 cut(s)	1330
BcnI	CCSGG	2 cut(s)	1035, 1057
BcoDI	GTCTC	4 cut(s)	11, 500, 558, 930
BfaI	CTAG	4 cut(s)	860, 1190, 1263, 1283
BfmI	CTRYAG	1 cut(s)	648
BfuAI	ACCTGC	1 cut(s)	641
BfuI	GTATCC	1 cut(s)	1330
BglII	AGATCT	1 cut(s)	1095
BisI	GCNGC	7 cut(s)	114, 165, 174, 418, 997, 1287, 1290
BlsI	GCNGC	7 cut(s)	115, 166, 175, 419, 998, 1288, 1291
Bme1390I	CCNGG	4 cut(s)	138, 1035, 1057, 1164
BmgBI	CACGTC	1 cut(s)	1223
BmgT120I	GGNCC	1 cut(s)	368
BmiI	GGNNCC	3 cut(s)	383, 907, 1168
BmrFI	CCNGG	4 cut(s)	138, 1035, 1057, 1164
BmsI	GCATC	1 cut(s)	239
BpmI	CTGGAG	3 cut(s)	159, 294, 344
Bpu14I	TTCGAA	1 cut(s)	1326
BpuEI	CTTGAG	2 cut(s)	944, 999
BpuMI	CCSGG	2 cut(s)	1035, 1057
BsaAI	YACGTR	2 cut(s)	875, 968
BsaI	GGTCTC	1 cut(s)	558
BsaJI	CCNNGG	6 cut(s)	364, 499, 756, 997, 1056, 1148
BsaWI	WCCGGW	1 cut(s)	79
BsaXI	ACNNNNNCTCC	2 cut(s)	553, 583
Bsc4I	CCNNNNNNNGG	6 cut(s)	137, 272, 377, 427, 428, 452
Bse118I	RCCGGY	1 cut(s)	902
Bse1I	ACTGG	2 cut(s)	193, 225
Bse21I	CCTNAGG	1 cut(s)	150
Bse3DI	GCAATG	2 cut(s)	813, 1338
BseAI	TCCGGA	1 cut(s)	79
BseBI	CCWGG	2 cut(s)	138, 1164
BseDI	CCNNGG	6 cut(s)	364, 499, 756, 997, 1056, 1148
BseGI	GGATG	2 cut(s)	437, 795
BseLI	CCNNNNNNNGG	6 cut(s)	137, 272, 377, 427, 428, 452
BseMI	GCAATG	2 cut(s)	813, 1338
BseMII	CTCAG	1 cut(s)	141
BseNI	ACTGG	2 cut(s)	193, 225
BsePI	GCGCGC	1 cut(s)	310
BseRI	GAGGAG	1 cut(s)	120
BseXI	GCAGC	4 cut(s)	125, 160, 176, 1273
Bsh1236I	CGCG	3 cut(s)	312, 501, 999
BshFI	GGCC	3 cut(s)	305, 369, 417
BshNI	GGYRCC	2 cut(s)	905, 1166
BsiSI	CCGG	4 cut(s)	80, 903, 1034, 1056
BslFI	GGGAC	1 cut(s)	1233
BslI	CCNNNNNNNGG	6 cut(s)	137, 272, 377, 427, 428, 452
BsmAI	GTCTC	4 cut(s)	11, 500, 558, 930
BsmFI	GGGAC	1 cut(s)	1233
BsmI	GAATGC	1 cut(s)	646
BsnI	GGCC	3 cut(s)	305, 369, 417
Bso31I	GGTCTC	1 cut(s)	558
Bsp119I	TTCGAA	1 cut(s)	1326
Bsp13I	TCCGGA	1 cut(s)	79
Bsp1407I	TGTACA	1 cut(s)	1201
Bsp143I	GATC	6 cut(s)	232, 381, 889, 1095, 1225, 1311
BspANI	GGCC	3 cut(s)	305, 369, 417
BspCNI	CTCAG	1 cut(s)	142
BspEI	TCCGGA	1 cut(s)	79
BspFNI	CGCG	3 cut(s)	312, 501, 999
BspLI	GGNNCC	3 cut(s)	383, 907, 1168
BspMAI	CTGCAG	1 cut(s)	652
BspMI	ACCTGC	1 cut(s)	641
BspPI	GGATC	2 cut(s)	376, 389
BspT104I	TTCGAA	1 cut(s)	1326
BspT107I	GGYRCC	2 cut(s)	905, 1166
BspTNI	GGTCTC	1 cut(s)	558
BsrDI	GCAATG	2 cut(s)	813, 1338
BsrFI	RCCGGY	1 cut(s)	902
BsrGI	TGTACA	1 cut(s)	1201
BsrI	ACTGG	2 cut(s)	193, 225
BssAI	RCCGGY	1 cut(s)	902
BssECI	CCNNGG	6 cut(s)	364, 499, 756, 997, 1056, 1148
BssHII	GCGCGC	1 cut(s)	310
BssMI	GATC	6 cut(s)	232, 381, 889, 1095, 1225, 1311
BssSI	CACGAG	1 cut(s)	1233
BssT1I	CCWWGG	3 cut(s)	364, 756, 1148
Bst2BI	CACGAG	1 cut(s)	1233
Bst2UI	CCWGG	2 cut(s)	138, 1164
Bst4CI	ACNGT	5 cut(s)	205, 476, 569, 803, 910
BstAPI	GCANNNNNTGC	2 cut(s)	812, 1166
BstAUI	TGTACA	1 cut(s)	1201
BstBAI	YACGTR	2 cut(s)	875, 968
BstBI	TTCGAA	1 cut(s)	1326
BstC8I	GCNNGC	5 cut(s)	312, 371, 606, 813, 1083
BstDEI	CTNAG	2 cut(s)	150, 465
BstDSI	CCRYGG	2 cut(s)	499, 997
BstF5I	GGATG	2 cut(s)	437, 795
BstFNI	CGCG	3 cut(s)	312, 501, 999
BstHHI	GCGC	3 cut(s)	312, 314, 604
BstKTI	GATC	6 cut(s)	235, 384, 892, 1098, 1228, 1314
BstMAI	GTCTC	4 cut(s)	11, 500, 558, 930
BstMBI	GATC	6 cut(s)	232, 381, 889, 1095, 1225, 1311
BstMWI	GCNNNNNNNGC	8 cut(s)	164, 170, 173, 311, 686, 812, 1166, 1193
BstNI	CCWGG	2 cut(s)	138, 1164
BstNSI	RCATGY	3 cut(s)	660, 815, 1200
BstSCI	CCNGG	4 cut(s)	136, 1033, 1055, 1162
BstSFI	CTRYAG	1 cut(s)	648
BstSNI	TACGTA	1 cut(s)	875
BstUI	CGCG	3 cut(s)	312, 501, 999
BstV1I	GCAGC	4 cut(s)	125, 160, 176, 1273
BstX2I	RGATCY	2 cut(s)	381, 1095
BstXI	CCANNNNNNTGG	1 cut(s)	697
BstYI	RGATCY	2 cut(s)	381, 1095
Bsu36I	CCTNAGG	1 cut(s)	150
BsuI	GTATCC	1 cut(s)	1330
BsuRI	GGCC	3 cut(s)	305, 369, 417
BtgI	CCRYGG	2 cut(s)	499, 997
BtgZI	GCGATG	1 cut(s)	262
BtrI	CACGTC	1 cut(s)	1223
BtsCI	GGATG	2 cut(s)	437, 795
BtsI	GCAGTG	1 cut(s)	741
BtsIMutI	CAGTG	1 cut(s)	741
BveI	ACCTGC	1 cut(s)	641
Cac8I	GCNNGC	5 cut(s)	312, 371, 606, 813, 1083
CfoI	GCGC	3 cut(s)	312, 314, 604
Cfr10I	RCCGGY	1 cut(s)	902
Cfr13I	GGNCC	1 cut(s)	368
Cfr42I	CCGCGG	2 cut(s)	502, 1000
CsiI	ACCWGGT	1 cut(s)	1162
Csp6I	GTAC	7 cut(s)	192, 435, 654, 857, 906, 1115, 1202
CviAII	CATG	5 cut(s)	195, 657, 812, 839, 1197
CviQI	GTAC	7 cut(s)	192, 435, 654, 857, 906, 1115, 1202
DdeI	CTNAG	2 cut(s)	150, 465
DpnI	GATC	6 cut(s)	234, 383, 891, 1097, 1227, 1313
DpnII	GATC	6 cut(s)	232, 381, 889, 1095, 1225, 1311
DraIII	CACNNNGTG	1 cut(s)	1166
EaeI	YGGCCR	1 cut(s)	415
EciI	GGCGGA	1 cut(s)	135
Eco105I	TACGTA	1 cut(s)	875
Eco130I	CCWWGG	3 cut(s)	364, 756, 1148
Eco147I	AGGCCT	1 cut(s)	305
Eco31I	GGTCTC	1 cut(s)	558
Eco32I	GATATC	1 cut(s)	106
Eco81I	CCTNAGG	1 cut(s)	150
EcoRI	GAATTC	1 cut(s)	1322
EcoRII	CCWGG	2 cut(s)	136, 1162
EcoRV	GATATC	1 cut(s)	106
EcoT14I	CCWWGG	3 cut(s)	364, 756, 1148
EcoT22I	ATGCAT	1 cut(s)	813
ErhI	CCWWGG	3 cut(s)	364, 756, 1148
FaeI	CATG	5 cut(s)	198, 660, 815, 842, 1200
FaqI	GGGAC	1 cut(s)	1233
FatI	CATG	5 cut(s)	194, 656, 811, 838, 1196
FauI	CCCGC	2 cut(s)	151, 378
FauNDI	CATATG	1 cut(s)	1077
FblI	GTMKAC	1 cut(s)	784
Fnu4HI	GCNGC	7 cut(s)	114, 165, 174, 418, 997, 1287, 1290
FokI	GGATG	2 cut(s)	444, 782
Fsp4HI	GCNGC	7 cut(s)	114, 165, 174, 418, 997, 1287, 1290
FspBI	CTAG	4 cut(s)	860, 1190, 1263, 1283
GlaI	GCGC	3 cut(s)	311, 313, 603
GluI	GCNGC	7 cut(s)	114, 165, 174, 418, 997, 1287, 1290
GsuI	CTGGAG	3 cut(s)	159, 294, 344
HaeIII	GGCC	3 cut(s)	305, 369, 417
HapII	CCGG	4 cut(s)	80, 903, 1034, 1056
HhaI	GCGC	3 cut(s)	312, 314, 604
Hin1II	CATG	5 cut(s)	198, 660, 815, 842, 1200
Hin6I	GCGC	3 cut(s)	310, 312, 602
HinP1I	GCGC	3 cut(s)	310, 312, 602
HinfI	GANTC	7 cut(s)	36, 179, 336, 738, 835, 1109, 1273
HpaII	CCGG	4 cut(s)	80, 903, 1034, 1056
HphI	GGTGA	1 cut(s)	629
Hpy166II	GTNNAC	5 cut(s)	506, 785, 857, 920, 1202
Hpy188I	TCNGA	1 cut(s)	1089
Hpy188III	TCNNGA	8 cut(s)	80, 230, 323, 1016, 1190, 1235, 1256, 1277
Hpy8I	GTNNAC	5 cut(s)	506, 785, 857, 920, 1202
HpyCH4III	ACNGT	5 cut(s)	205, 476, 569, 803, 910
HpyCH4IV	ACGT	5 cut(s)	319, 874, 967, 1068, 1222
HpyCH4V	TGCA	7 cut(s)	650, 718, 746, 806, 811, 847, 1160
HpyF10VI	GCNNNNNNNGC	8 cut(s)	164, 170, 173, 311, 686, 812, 1166, 1193
HpyF3I	CTNAG	2 cut(s)	150, 465
HpySE526I	ACGT	5 cut(s)	319, 874, 967, 1068, 1222
Hsp92II	CATG	5 cut(s)	198, 660, 815, 842, 1200
HspAI	GCGC	3 cut(s)	310, 312, 602
Kpn2I	TCCGGA	1 cut(s)	79
KpnI	GGTACC	1 cut(s)	909
KspI	CCGCGG	2 cut(s)	502, 1000
Kzo9I	GATC	6 cut(s)	232, 381, 889, 1095, 1225, 1311
Lsp1109I	GCAGC	4 cut(s)	125, 160, 176, 1273
LweI	GCATC	1 cut(s)	239
MabI	ACCWGGT	1 cut(s)	1162
MaeI	CTAG	4 cut(s)	860, 1190, 1263, 1283
MaeII	ACGT	5 cut(s)	319, 874, 967, 1068, 1222
MaeIII	GTNAC	3 cut(s)	3, 124, 236
MalI	GATC	6 cut(s)	234, 383, 891, 1097, 1227, 1313
MboI	GATC	6 cut(s)	232, 381, 889, 1095, 1225, 1311
MboII	GAAGA	5 cut(s)	174, 290, 674, 782, 844
MflI	RGATCY	2 cut(s)	381, 1095
MlyI	GAGTC	1 cut(s)	1282
MmeI	TCCRAC	2 cut(s)	13, 539
Mph1103I	ATGCAT	1 cut(s)	813
MroI	TCCGGA	1 cut(s)	79
MroXI	GAANNNNTTC	1 cut(s)	1251
MseI	TTAA	5 cut(s)	51, 354, 441, 537, 728
MslI	CAYNNNNRTG	1 cut(s)	852
MspA1I	CMGCKG	3 cut(s)	167, 501, 999
MspI	CCGG	4 cut(s)	80, 903, 1034, 1056
MspR9I	CCNGG	4 cut(s)	138, 1035, 1057, 1164
Mva1269I	GAATGC	1 cut(s)	646
MvaI	CCWGG	2 cut(s)	138, 1164
MvnI	CGCG	3 cut(s)	312, 501, 999
MwoI	GCNNNNNNNGC	8 cut(s)	164, 170, 173, 311, 686, 812, 1166, 1193
NciI	CCSGG	2 cut(s)	1035, 1057
NdeI	CATATG	1 cut(s)	1077
NdeII	GATC	6 cut(s)	232, 381, 889, 1095, 1225, 1311
NlaIII	CATG	5 cut(s)	198, 660, 815, 842, 1200
NlaIV	GGNNCC	3 cut(s)	383, 907, 1168
NmeAIII	GCCGAG	1 cut(s)	797
NmuCI	GTSAC	1 cut(s)	3
NsiI	ATGCAT	1 cut(s)	813
NspI	RCATGY	3 cut(s)	660, 815, 1200
NspV	TTCGAA	1 cut(s)	1326
OliI	CACNNNNGTG	1 cut(s)	852
PaeI	GCATGC	1 cut(s)	815
PauI	GCGCGC	1 cut(s)	310
PceI	AGGCCT	1 cut(s)	305
PcsI	WCGNNNNNNNCGW	2 cut(s)	717, 906
PctI	GAATGC	1 cut(s)	646
PdmI	GAANNNNTTC	1 cut(s)	1251
PfeI	GAWTC	6 cut(s)	36, 179, 336, 738, 835, 1109
PkrI	GCNGC	7 cut(s)	115, 166, 175, 419, 998, 1288, 1291
PleI	GAGTC	1 cut(s)	1281
PpsI	GAGTC	1 cut(s)	1281
Ppu21I	YACGTR	2 cut(s)	875, 968
PsiI	TTATAA	2 cut(s)	60, 597
Psp6I	CCWGG	2 cut(s)	136, 1162
PspGI	CCWGG	2 cut(s)	136, 1162
PspN4I	GGNNCC	3 cut(s)	383, 907, 1168
PspPI	GGNCC	1 cut(s)	368
PstI	CTGCAG	1 cut(s)	652
PsuI	RGATCY	2 cut(s)	381, 1095
PteI	GCGCGC	1 cut(s)	310
RsaI	GTAC	7 cut(s)	193, 436, 655, 858, 907, 1116, 1203
RsaNI	GTAC	7 cut(s)	192, 435, 654, 857, 906, 1115, 1202
RseI	CAYNNNNRTG	1 cut(s)	852
SacII	CCGCGG	2 cut(s)	502, 1000
SaqAI	TTAA	5 cut(s)	51, 354, 441, 537, 728
SatI	GCNGC	7 cut(s)	114, 165, 174, 418, 997, 1287, 1290
Sau3AI	GATC	6 cut(s)	232, 381, 889, 1095, 1225, 1311
Sau96I	GGNCC	1 cut(s)	368
SchI	GAGTC	1 cut(s)	1282
ScrFI	CCNGG	4 cut(s)	138, 1035, 1057, 1164
SexAI	ACCWGGT	1 cut(s)	1162
SfaNI	GCATC	1 cut(s)	239
SfcI	CTRYAG	1 cut(s)	648
Sfr303I	CCGCGG	2 cut(s)	502, 1000
SfuI	TTCGAA	1 cut(s)	1326
SgrBI	CCGCGG	2 cut(s)	502, 1000
SmiMI	CAYNNNNRTG	1 cut(s)	852
SmlI	CTYRAG	2 cut(s)	923, 1014
SmoI	CTYRAG	2 cut(s)	923, 1014
SnaBI	TACGTA	1 cut(s)	875
SphI	GCATGC	1 cut(s)	815
SseBI	AGGCCT	1 cut(s)	305
SspMI	CTAG	4 cut(s)	860, 1190, 1263, 1283
StuI	AGGCCT	1 cut(s)	305
StyD4I	CCNGG	4 cut(s)	136, 1033, 1055, 1162
StyI	CCWWGG	3 cut(s)	364, 756, 1148
TaaI	ACNGT	5 cut(s)	205, 476, 569, 803, 910
TaiI	ACGT	5 cut(s)	322, 877, 970, 1071, 1225
TaqI	TCGA	3 cut(s)	121, 1180, 1326
TaqII	GACCGA	2 cut(s)	1005, 1106
TatI	WGTACW	4 cut(s)	434, 856, 1114, 1201
TauI	GCSGC	3 cut(s)	420, 999, 1292
TfiI	GAWTC	6 cut(s)	36, 179, 336, 738, 835, 1109
Tru1I	TTAA	5 cut(s)	51, 354, 441, 537, 728
Tru9I	TTAA	5 cut(s)	51, 354, 441, 537, 728
TscAI	CASTG	1 cut(s)	748
TseFI	GTSAC	1 cut(s)	3
TseI	GCWGC	4 cut(s)	113, 164, 173, 1286
Tsp45I	GTSAC	1 cut(s)	3
TspDTI	ATGAA	4 cut(s)	102, 504, 686, 1260
TspRI	CASTG	1 cut(s)	748
XapI	RAATTY	2 cut(s)	1316, 1322
XbaI	TCTAGA	1 cut(s)	1189
XceI	RCATGY	3 cut(s)	660, 815, 1200
XcmI	CCANNNNNNNNNTGG	1 cut(s)	555
XmiI	GTMKAC	1 cut(s)	784
XmnI	GAANNNNTTC	1 cut(s)	1251
XspI	CTAG	4 cut(s)	860, 1190, 1263, 1283
Zsp2I	ATGCAT	1 cut(s)	813

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.