FvH4_1g01180

atfip1 v ,atfips5,fip1 v ,fips5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0009289
Physical Location & Seq
Forward (+)
593258 .. 601070
7813 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g01180.t1

Sequence Viewer

Length: 3933 bp
ATGGAAGACGACGATGAATTTGGAGATCTCTACACCGACGTCCTCCAATCTTTCCAGTCCTCATCCCAATCGTCCTCCGCCCCGGCACCGCCGCCGCAGCAGCCTCTCCACCGTCCGATCGATCTCAACCTCAAAACCGAGCCCGCCGACGACGAGATCCTCCCCCCGGTTCCGCCTCAATCCAATCCCAATTCCCAAACCCTAGCTCCCGATTCGGCTCCTAACGCCGATTCTAGGGTTTTGGAGGCGAGGGATGTGAAATTGGAGAGTAAAGATTCGGATTTGAACGAAAAGGAGGTGAATTTCGATATCGAGGAGGAGAGTACTAATGAGATTCCCGGCATGGGATTGGACGCCGTGATTCCGGGGCTCTCCGGCGCGGCGCCGGTGAGGAATACGGAGAATAACAACCCGGAAGGTTCGAGAAGGGACGGCGGCGATGATTGGGACAGTGATGATAGTGAGGATGACTTGCAGATTGTGTTGAATGATAACAACGCAATGGGGATGGAGAGAGGCAATGGCGAGGAGGATGATGACGACGGGCTGGTTATCATGGCGGAGAGTGAGCTCAATCATGCCGGGGAGGAGCCGGAGTGGGGAGAAGAGGGGCAGCAGGCGGCGGACGGTGAGAGGAAGGAGATGGGGGAGGCTGGGAGAGGAGGAGGAGGAGGAGGAGGAGGTCCGATGGTGGCGCCGAAAATTGGGTATAGCAATCATGGGTATCATCCATTTCATTCCCAGTTTAAGTATGTGAGACCAGGTGCTGTGCCAATGCCTGGACCGACTAATTCTGGTCCTGGAGTCCCAGGTCAAGTTCGTCCACTTGTAAACATGGGCCCAACACCTGGTCGAGGTAGAGGTGACTGGAGACCAACTGGATTAAAAAACGGTACTCCGATGCAGAAAAATTTTCACTCCGGCTTTGGTACACCTGGCTGGGGCAACAATATGGGTGGTCGCGGTTTCGGGGGTGGACTTGAATTCACACTTCCTTCTCACAAGACCATATTTGATGTGGACATTGACGGTTTTGAGGAAAAACCTTGGAAATATCCTGGTGCTGATACTTCAGACTATTTCAACTTTGGATTAAATGATGATAGCTGGAGAGATTATTGCAAACAGCTGGAACAGCTCCGTTTGGAGTCCACCATGCAAAGCAAAATCCGTGTCTACGAAAGTGGACGAACAGAACAGGAATATGATCCAGATCTGCCTCCAGAATTGGCAGCAGCAACTGGTATGCATGACTTTCCTACTGCTAATACAAACCTGGGAAAGTCAGAGGGCGGGCAAAGTGATTTTGCAAAAGGATCTGCTCGCATGCGTCCGCCTATTCCAACTGGAAGAGCAATACAGGTGGAAAGTGGTTATGGTGAACGTTTCCCCTCATGTGAAAACCGGCCACAGCGAATGCGTGACTCAGATGCTGTCATTGAAATTGTCTTGCAGGACTCTTTAGATGATGATTCCTCTGCACGAAATGATATCCCAGACGGAACTGAAAATGATCCTTCCAAAGAGGATGGAAGTGCTATTGGTGAGGGAGACCTTCGACAGGATGACAAGACCTACTCCAATGGTTTTCCACACGCGCACAATAACCGAAAGAGTGATTCACTTGGAAGGAAAAGGCCATTCAATGGTAGTGTGCCAGAAGACGTTGAAAGTTTGCCCTTCCGTCCAGAAGGGCCAGTCCAACGTGCTGGTTCTGGGGACCAGACTCCCAGTTCTACTGGTGGTAGTTTTGGAGAAAATAGGGGTACACAGAGAAGAGCACGTGACAGATCTCCTAGGAGTACAAGAGACATGAAATTTCCTGACAATCAAAAGGAAGGATCAGTGGAAAGCGTGGCTGGCAGACGAAGTCCTTTGATCTCATCTCCTGTCTCACATGGGGCTGCCCGTGAGTCAAATGTTCAGCATAGAAGCGGTGACCAAGATGAGCCTTTACCGGGTGATGAAAACTCTGGAATGGAAAAAGAGGAAATGGCTGCGAATGTAAATGATGGAGTTCCAAACCATCAAAAGTTGACTTCACGAGTTGAACAGTCTGCTGATGAAGAACTTGATGATGGTGAAGACTCCAAGGCTGCAAGAAGTAGTGACAACAGCAAAGCAAGATCAGGAAGCAGTAGGGATTATCAGAAGTGGAGGGATGGAGTTGAGGAGGAAGTAATTCAAGGACGTTCATCTCACTCTGGAGGCATCAAGAGTCACCTTGATGAAAAGGAACAGGGATTCCAAAGAAAAGGCCGTGATGGTAGACCAGAACCGGATAGAAATCAAATGTTACTCAAAGGGAGGGAGGGTTCTTATCCGTATAGGGATTGGGATCCTAGCTCTGTTCATCATTCACAATTTAAAAATGATGCGCTTCATAGGCGTAAAGAGAGGGAAATTCTTGATGGAGCATGGCAAAGGAGGGATGATGATCCTTATAGCAGAAGGATTAGAACTGAAGAACCACGGAAGAGGGAACGTGGTGATGAAATGGGATCCAGGCACAGGAGTAAGATTCGTGAAAGTGAGAGGAGTGACAAAGATGAGTATATGCAGTCAAGAAAGCAGTTAGATAATGGCAGCTATAGGGTCTTTTATGATAAGGATGTGGGATCACGACCCAGGGAAAGAGAAGATAGTCTGAAGGGCAGGTATGAACATATAGATGATTACCATGGCAAGAGAAGGAAAGATGAGGAATACATGAGGAGGGACCAAATAGATAAAGAAGAACTTCTACAGGGCCACAGAGATACTACCACTCGCCGAAAGCGTGAAAGGGATGAAGTTTTAGATCAGCGTAAAAGAGATGACCAGCAGAAAGTCAGGGATAATCCTGATGACCACCACTCTGTCAGGCACAAAGATGAAAGCTGGTTGCAGAGGGAGAGAGGTGACAGACAAAGAGAAAGGGAGGAGTGGCATAGGCTTAAGCAATCACATGAAGAAAATCTACCAAAGAGGGAAAGAGATGATGGTCGAGTTTCTGTAAGGGGTGGGCGTGTTTCAGAAGACAAAGCATGGGTAGGCCATGCTAGGGCGAAGGATGAAAACAAAGGCTCTGATAAGGAGCACCAAAATAAAGAGACTGTGCGACATGGTGAGCAGTCCAAAAGAAGGGATAGGGTTGAGGAGGAAAGTTCACATCATAGGGGACGTGAGGATGCTCATGCACGGGGAAATCAAATGAATATTGATGAGAGACGATCTGGAAAAGAGAGATCAAGTACTCGCAATGAACGTGTTGATAGTCAAAAGGTCCATGATAGAAAACATAAAGAGAATTCAAGAAGGAATAAAGAAATTGAAATTGCTGATATCAGCACTTCAATCACTTCCAAAAGACATCAAGACGACCAAAGTGGCCGTAGCAAGGAGATGGGCTTGAAAGGCACCCGTGAGCAAGGAGTTGGTCACTCTTCTAAAAGGCACAGGGAAGATGCTTCCTCTGATGATGAGCAGCAGGATTTAAAAAAGGGGCGCTCCAAATTGGAACGATGGACAAGTCAGAAGGAGAGGGATTTCAGCATCTTAAGTAAGTCATCCTCTACCTCAAAGTTCAAAGAGCTTGATAGGGGATCCTCAGATGGCAGTAAACTTCCAGATGATTCTTCCAAGCCTGTTGAGGCTGTTGATAACCAACATCCATTGCCTGAGGAGAATGCTGGTGATCAGGATATTAAGGATGGTGACACAAAACCATTAGATACAGACACGACATTGGAGGGCCGTCACCTGGACACCGTTGAGAAGTTGAAGAAACGAAGTGAGCGGTTCAAGCTTCCATTGCCGAGCGAAAAAGAACCATCAACAATCAAAAAGATTGAGACCGAACTGCTGCCTTCCCCTAATAGTGACCCTCCTGTGGTAGAATCTGAGATCAAACCAGAACGGCCAGCTCGGAAAAGAAGATGGATCAGCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005515 GO:0042802 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Fip1

Protein Analysis

1311

Amino Acids

147.78

Weight (kDa)

5.45

Isoelectric Point (pI)

60.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fip1 PF05182 339 - 381 4.5e-20 Fip1 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 42
Acc36I ACCTGC 1 cut(s) 2646
AccB1I GGYRCC 4 cut(s) 85, 382, 694, 3398
AccB7I CCANNNNNTGG 3 cut(s) 779, 848, 1646
AccBSI CCGCTC 1 cut(s) 3778
AccI GTMKAC 2 cut(s) 1176, 2269
AccII CGCG 3 cut(s) 380, 963, 1598
AclI AACGTT 1 cut(s) 1384
AcoI YGGCCR 3 cut(s) 1406, 3370, 3899
AcsI RAATTY 7 cut(s) 17, 301, 910, 983, 1817, 2403, 3289
AcuI CTGAAG 3 cut(s) 1056, 2484, 2669
AcvI CACGTG 1 cut(s) 1784
AcyI GRCGYC 4 cut(s) 39, 354, 383, 695
AfaI GTAC 6 cut(s) 325, 895, 931, 1768, 1804, 3235
AflII CTTAAG 2 cut(s) 2936, 3538
AflIII ACRYGT 1 cut(s) 3247
AjiI CACGTC 1 cut(s) 3164
AloI GAACNNNNNNTCC 4 cut(s) 2229, 2261, 2299, 2331
Alw21I GWGCWC 3 cut(s) 573, 1783, 3081
Alw26I GTCTC 8 cut(s) 751, 865, 1545, 1803, 1897, 3086, 3202, 3827
AlwNI CAGNNNCTG 3 cut(s) 767, 1241, 1433
ApaI GGGCCC 1 cut(s) 842
ApoI RAATTY 7 cut(s) 17, 301, 910, 983, 1817, 2403, 3289
ArsI GACNNNNNNTTYG 3 cut(s) 34, 1158, 1190
Asp700I GAANNNNTTC 2 cut(s) 2181, 2739
AspA2I CCTAGG 1 cut(s) 1796
AspLEI GCGC 6 cut(s) 380, 385, 697, 1600, 2380, 3489
AsuC2I CCSGG 7 cut(s) 83, 167, 339, 366, 413, 583, 1959
AvaII GGWCC 6 cut(s) 683, 782, 797, 1720, 2719, 3265
AvrII CCTAGG 1 cut(s) 1796
AxyI CCTNAGG 1 cut(s) 3660
BaeGI GKGCMC 1 cut(s) 842
BamHI GGATCC 3 cut(s) 2338, 2501, 3584
BanI GGYRCC 4 cut(s) 85, 382, 694, 3398
BanII GRGCYC 4 cut(s) 144, 372, 573, 842
BarI GAAGNNNNNNTAC 4 cut(s) 2727, 2759, 2943, 2975
BauI CACGAG 1 cut(s) 2043
BbrPI CACGTG 1 cut(s) 1784
BbsI GAAGAC 4 cut(s) 12, 1668, 2091, 3024
Bbv12I GWGCWC 3 cut(s) 573, 1783, 3081
BceAI ACGGC 6 cut(s) 341, 448, 2244, 3357, 3720, 3914
BclI TGATCA 1 cut(s) 3676
BcnI CCSGG 7 cut(s) 83, 167, 339, 366, 413, 583, 1959
BcoDI GTCTC 8 cut(s) 751, 865, 1545, 1803, 1897, 3086, 3202, 3827
BfaI CTAG 5 cut(s) 203, 234, 1797, 2343, 3042
BfmI CTRYAG 2 cut(s) 2590, 2744
BfoI RGCGCY 3 cut(s) 386, 698, 3490
BfrI CTTAAG 2 cut(s) 2936, 3538
BfuAI ACCTGC 1 cut(s) 2646
BglII AGATCT 3 cut(s) 25, 1213, 1790
BlnI CCTAGG 1 cut(s) 1796
BmcAI AGTACT 2 cut(s) 325, 3235
Bme18I GGWCC 6 cut(s) 683, 782, 797, 1720, 2719, 3265
BmgBI CACGTC 1 cut(s) 3164
BmrI ACTGGG 2 cut(s) 736, 1725
BmsI GCATC 7 cut(s) 891, 1420, 2220, 2365, 3160, 3436, 3543
BmuI ACTGGG 2 cut(s) 736, 1725
BpiI GAAGAC 4 cut(s) 12, 1668, 2091, 3024
BpmI CTGGAG 5 cut(s) 822, 889, 1129, 1206, 2226
BpuMI CCSGG 7 cut(s) 83, 167, 339, 366, 413, 583, 1959
Bsa29I ATCGAT 1 cut(s) 120
BsaAI YACGTR 1 cut(s) 1784
BsaBI GATNNNNATC 4 cut(s) 1212, 2286, 2337, 2436
BsaHI GRCGYC 4 cut(s) 39, 354, 383, 695
BsaI GGTCTC 4 cut(s) 751, 865, 1545, 3827
BsaWI WCCGGW 1 cut(s) 2278
BsaXI ACNNNNNCTCC 6 cut(s) 190, 220, 581, 611, 2299, 2329
Bse118I RCCGGY 2 cut(s) 385, 1404
Bse1I ACTGG 9 cut(s) 55, 742, 872, 883, 1246, 1351, 1697, 1731, 1744
Bse21I CCTNAGG 1 cut(s) 3660
Bse3DI GCAATG 5 cut(s) 507, 526, 3247, 3653, 3791
Bse8I GATNNNNATC 4 cut(s) 1212, 2286, 2337, 2436
BseCI ATCGAT 1 cut(s) 120
BseJI GATNNNNATC 4 cut(s) 1212, 2286, 2337, 2436
BseMI GCAATG 5 cut(s) 507, 526, 3247, 3653, 3791
BseMII CTCAG 4 cut(s) 1440, 3603, 3651, 3873
BseNI ACTGG 9 cut(s) 55, 742, 872, 883, 1246, 1351, 1697, 1731, 1744
BseSI GKGCMC 1 cut(s) 842
BseYI CCCAGC 2 cut(s) 653, 939
BsgI GTGCAG 1 cut(s) 1464
Bsh1236I CGCG 3 cut(s) 380, 963, 1598
Bsh1285I CGRYCG 1 cut(s) 120
BshNI GGYRCC 4 cut(s) 85, 382, 694, 3398
BshVI ATCGAT 1 cut(s) 120
BsiEI CGRYCG 1 cut(s) 120
BsiHKAI GWGCWC 3 cut(s) 573, 1783, 3081
BslFI GGGAC 6 cut(s) 443, 461, 791, 1733, 2732, 3174
BsmAI GTCTC 8 cut(s) 751, 865, 1545, 1803, 1897, 3086, 3202, 3827
BsmBI CGTCTC 1 cut(s) 3202
BsmFI GGGAC 6 cut(s) 443, 461, 791, 1733, 2732, 3174
BsmI GAATGC 2 cut(s) 1422, 3673
Bso31I GGTCTC 4 cut(s) 751, 865, 1545, 3827
Bsp120I GGGCCC 1 cut(s) 838
Bsp1286I GDGCHC 6 cut(s) 144, 372, 573, 842, 1783, 3081
Bsp19I CCATGG 1 cut(s) 2680
BspCNI CTCAG 4 cut(s) 1439, 3602, 3652, 3874
BspDI ATCGAT 1 cut(s) 120
BspFNI CGCG 3 cut(s) 380, 963, 1598
BspMI ACCTGC 1 cut(s) 2646
BspQI GCTCTTC 2 cut(s) 1345, 1771
BspT107I GGYRCC 4 cut(s) 85, 382, 694, 3398
BspTI CTTAAG 2 cut(s) 2936, 3538
BspTNI GGTCTC 4 cut(s) 751, 865, 1545, 3827
BsrBI CCGCTC 1 cut(s) 3778
BsrDI GCAATG 5 cut(s) 507, 526, 3247, 3653, 3791
BsrFI RCCGGY 2 cut(s) 385, 1404
BsrI ACTGG 9 cut(s) 55, 742, 872, 883, 1246, 1351, 1697, 1731, 1744
BssAI RCCGGY 2 cut(s) 385, 1404
BssNI GRCGYC 4 cut(s) 39, 354, 383, 695
BssSI CACGAG 1 cut(s) 2043
BssT1I CCWWGG 4 cut(s) 1046, 1796, 2091, 2680
Bst2BI CACGAG 1 cut(s) 2043
Bst4CI ACNGT 8 cut(s) 113, 452, 629, 893, 1031, 2055, 3097, 3751
Bst6I CTCTTC 5 cut(s) 600, 1345, 1771, 2471, 3430
BstACI GRCGYC 4 cut(s) 39, 354, 383, 695
BstAFI CTTAAG 2 cut(s) 2936, 3538
BstBAI YACGTR 1 cut(s) 1784
BstC8I GCNNGC 7 cut(s) 144, 618, 1295, 1324, 1328, 1861, 3903
BstDEI CTNAG 4 cut(s) 1426, 3589, 3660, 3882
BstDSI CCRYGG 2 cut(s) 2471, 2680
BstEII GGTNACC 1 cut(s) 1937
BstENI CCTNNNNNAGG 2 cut(s) 852, 1559
BstFNI CGCG 3 cut(s) 380, 963, 1598
BstH2I RGCGCY 3 cut(s) 386, 698, 3490
BstHHI GCGC 6 cut(s) 380, 385, 697, 1600, 2380, 3489
BstMAI GTCTC 8 cut(s) 751, 865, 1545, 1803, 1897, 3086, 3202, 3827
BstMCI CGRYCG 1 cut(s) 120
BstMWI GCNNNNNNNGC 9 cut(s) 97, 100, 224, 1135, 1860, 2386, 3396, 3784, 3793
BstNSI RCATGY 1 cut(s) 1330
BstPI GGTNACC 1 cut(s) 1937
BstSFI CTRYAG 2 cut(s) 2590, 2744
BstSLI GKGCMC 1 cut(s) 842
BstUI CGCG 3 cut(s) 380, 963, 1598
BstV2I GAAGAC 4 cut(s) 12, 1668, 2091, 3024
BstX2I RGATCY 8 cut(s) 25, 156, 1213, 1316, 1790, 2338, 2501, 3584
BstXI CCANNNNNNTGG 1 cut(s) 1709
BstYI RGATCY 8 cut(s) 25, 156, 1213, 1316, 1790, 2338, 2501, 3584
Bsu15I ATCGAT 1 cut(s) 120
Bsu36I CCTNAGG 1 cut(s) 3660
BsuTUI ATCGAT 1 cut(s) 120
BtgI CCRYGG 2 cut(s) 2471, 2680
BtgZI GCGATG 1 cut(s) 453
BtrI CACGTC 1 cut(s) 3164
BtsIMutI CAGTG 2 cut(s) 457, 1851
BveI ACCTGC 1 cut(s) 2646
Cac8I GCNNGC 7 cut(s) 144, 618, 1295, 1324, 1328, 1861, 3903
CaiI CAGNNNCTG 3 cut(s) 767, 1241, 1433
CfoI GCGC 6 cut(s) 380, 385, 697, 1600, 2380, 3489
Cfr10I RCCGGY 2 cut(s) 385, 1404
ClaI ATCGAT 1 cut(s) 120
CseI GACGC 2 cut(s) 362, 1319
CsiI ACCWGGT 2 cut(s) 760, 847
Csp6I GTAC 6 cut(s) 324, 894, 930, 1767, 1803, 3234
CspCI CAANNNNNGTGG 4 cut(s) 937, 972, 1344, 1379
CviQI GTAC 6 cut(s) 324, 894, 930, 1767, 1803, 3234
DdeI CTNAG 4 cut(s) 1426, 3589, 3660, 3882
DinI GGCGCC 2 cut(s) 384, 696
DraI TTTAAA 2 cut(s) 2368, 3477
EaeI YGGCCR 3 cut(s) 1406, 3370, 3899
Eam1104I CTCTTC 5 cut(s) 600, 1345, 1771, 2471, 3430
EarI CTCTTC 5 cut(s) 600, 1345, 1771, 2471, 3430
EciI GGCGGA 5 cut(s) 67, 162, 575, 638, 1323
Ecl136II GAGCTC 1 cut(s) 571
Eco130I CCWWGG 4 cut(s) 1046, 1796, 2091, 2680
Eco24I GRGCYC 4 cut(s) 144, 372, 573, 842
Eco31I GGTCTC 4 cut(s) 751, 865, 1545, 3827
Eco32I GATATC 3 cut(s) 310, 1492, 3325
Eco47I GGWCC 6 cut(s) 683, 782, 797, 1720, 2719, 3265
Eco53kI GAGCTC 1 cut(s) 571
Eco57I CTGAAG 3 cut(s) 1056, 2484, 2669
Eco72I CACGTG 1 cut(s) 1784
Eco81I CCTNAGG 1 cut(s) 3660
Eco91I GGTNACC 1 cut(s) 1937
EcoICRI GAGCTC 1 cut(s) 571
EcoNI CCTNNNNNAGG 2 cut(s) 852, 1559
EcoO65I GGTNACC 1 cut(s) 1937
EcoRI GAATTC 2 cut(s) 983, 3289
EcoRV GATATC 3 cut(s) 310, 1492, 3325
EcoT14I CCWWGG 4 cut(s) 1046, 1796, 2091, 2680
EcoT22I ATGCAT 1 cut(s) 1251
EcoT38I GRGCYC 4 cut(s) 144, 372, 573, 842
EgeI GGCGCC 2 cut(s) 384, 696
EheI GGCGCC 2 cut(s) 384, 696
ErhI CCWWGG 4 cut(s) 1046, 1796, 2091, 2680
Esp3I CGTCTC 1 cut(s) 3202
FalI AAGNNNNNCTT 2 cut(s) 2724, 2756
FaqI GGGAC 6 cut(s) 443, 461, 791, 1733, 2732, 3174
FauI CCCGC 2 cut(s) 151, 1286
FbaI TGATCA 1 cut(s) 3676
FblI GTMKAC 2 cut(s) 1176, 2269
FriOI GRGCYC 4 cut(s) 144, 372, 573, 842
FspBI CTAG 5 cut(s) 203, 234, 1797, 2343, 3042
GlaI GCGC 6 cut(s) 379, 384, 696, 1599, 2379, 3488
GsaI CCCAGC 2 cut(s) 657, 943
GsuI CTGGAG 5 cut(s) 822, 889, 1129, 1206, 2226
HaeII RGCGCY 3 cut(s) 386, 698, 3490
HgaI GACGC 2 cut(s) 362, 1319
HhaI GCGC 6 cut(s) 380, 385, 697, 1600, 2380, 3489
Hin1I GRCGYC 4 cut(s) 39, 354, 383, 695
Hin6I GCGC 6 cut(s) 378, 383, 695, 1598, 2378, 3487
HinP1I GCGC 6 cut(s) 378, 383, 695, 1598, 2378, 3487
HincII GTYRAC 1 cut(s) 2037
HindII GTYRAC 1 cut(s) 2037
HindIII AAGCTT 1 cut(s) 3785
Hpy99I CGWCG 5 cut(s) 14, 41, 152, 155, 545
HpyCH4III ACNGT 8 cut(s) 113, 452, 629, 893, 1031, 2055, 3097, 3751
HpyCH4IV ACGT 9 cut(s) 39, 1384, 1665, 1705, 1783, 2191, 2485, 3163, 3247
HpyF10VI GCNNNNNNNGC 9 cut(s) 97, 100, 224, 1135, 1860, 2386, 3396, 3784, 3793
HpyF3I CTNAG 4 cut(s) 1426, 3589, 3660, 3882
HpySE526I ACGT 9 cut(s) 39, 1384, 1665, 1705, 1783, 2191, 2485, 3163, 3247
Hsp92I GRCGYC 4 cut(s) 39, 354, 383, 695
HspAI GCGC 6 cut(s) 378, 383, 695, 1598, 2378, 3487
KasI GGCGCC 2 cut(s) 382, 694
Ksp22I TGATCA 1 cut(s) 3676
LguI GCTCTTC 2 cut(s) 1345, 1771
LmnI GCTCC 7 cut(s) 211, 223, 589, 1143, 2414, 3076, 3494
LweI GCATC 7 cut(s) 891, 1420, 2220, 2365, 3160, 3436, 3543
MabI ACCWGGT 2 cut(s) 760, 847
MaeI CTAG 5 cut(s) 203, 234, 1797, 2343, 3042
MaeII ACGT 9 cut(s) 39, 1384, 1665, 1705, 1783, 2191, 2485, 3163, 3247
MbiI CCGCTC 1 cut(s) 3778
MflI RGATCY 8 cut(s) 25, 156, 1213, 1316, 1790, 2338, 2501, 3584
MhlI GDGCHC 6 cut(s) 144, 372, 573, 842, 1783, 3081
Mly113I GGCGCC 2 cut(s) 383, 695
MlyI GAGTC 8 cut(s) 813, 1157, 1418, 1451, 1720, 1922, 2081, 2227
MmeI TCCRAC 2 cut(s) 1367, 1726
Mph1103I ATGCAT 1 cut(s) 1251
MroXI GAANNNNTTC 2 cut(s) 2181, 2739
MseI TTAA 8 cut(s) 747, 884, 1094, 2367, 2937, 3476, 3539, 3687
MslI CAYNNNNRTG 3 cut(s) 2226, 2670, 2871
MspA1I CMGCKG 1 cut(s) 1129
MspCI CTTAAG 2 cut(s) 2936, 3538
MteI GCGCNGCGC 1 cut(s) 381
Mva1269I GAATGC 2 cut(s) 1422, 3673
MvnI CGCG 3 cut(s) 380, 963, 1598
MwoI GCNNNNNNNGC 9 cut(s) 97, 100, 224, 1135, 1860, 2386, 3396, 3784, 3793
NarI GGCGCC 2 cut(s) 383, 695
NciI CCSGG 7 cut(s) 83, 167, 339, 366, 413, 583, 1959
NcoI CCATGG 1 cut(s) 2680
NmeAIII GCCGAG 1 cut(s) 3822
NsiI ATGCAT 1 cut(s) 1251
NspI RCATGY 1 cut(s) 1330
PaeI GCATGC 1 cut(s) 1330
PasI CCCWGGG 1 cut(s) 2628
PciSI GCTCTTC 2 cut(s) 1345, 1771
PcsI WCGNNNNNNNCGW 2 cut(s) 2776, 3244
PctI GAATGC 2 cut(s) 1422, 3673
PdmI GAANNNNTTC 2 cut(s) 2181, 2739
PflFI GACNNNGTC 1 cut(s) 1869
PflMI CCANNNNNTGG 3 cut(s) 779, 848, 1646
PfoI TCCNGGA 1 cut(s) 799
Ple19I CGATCG 1 cut(s) 120
PleI GAGTC 8 cut(s) 812, 1156, 1418, 1451, 1720, 1921, 2081, 2226
PluTI GGCGCC 2 cut(s) 386, 698
PmaCI CACGTG 1 cut(s) 1784
PmlI CACGTG 1 cut(s) 1784
PpsI GAGTC 8 cut(s) 812, 1156, 1418, 1451, 1720, 1921, 2081, 2226
Ppu21I YACGTR 1 cut(s) 1784
Psp124BI GAGCTC 1 cut(s) 573
Psp1406I AACGTT 1 cut(s) 1384
PspCI CACGTG 1 cut(s) 1784
PspEI GGTNACC 1 cut(s) 1937
PspFI CCCAGC 2 cut(s) 653, 939
PspOMI GGGCCC 1 cut(s) 838
PstNI CAGNNNCTG 3 cut(s) 767, 1241, 1433
PsuI RGATCY 8 cut(s) 25, 156, 1213, 1316, 1790, 2338, 2501, 3584
PsyI GACNNNGTC 1 cut(s) 1869
PvuI CGATCG 1 cut(s) 120
PvuII CAGCTG 1 cut(s) 1129
RsaI GTAC 6 cut(s) 325, 895, 931, 1768, 1804, 3235
RsaNI GTAC 6 cut(s) 324, 894, 930, 1767, 1803, 3234
RseI CAYNNNNRTG 3 cut(s) 2226, 2670, 2871
SacI GAGCTC 1 cut(s) 573
SapI GCTCTTC 2 cut(s) 1345, 1771
SaqAI TTAA 8 cut(s) 747, 884, 1094, 2367, 2937, 3476, 3539, 3687
ScaI AGTACT 2 cut(s) 325, 3235
SchI GAGTC 8 cut(s) 813, 1157, 1418, 1451, 1720, 1922, 2081, 2227
SduI GDGCHC 6 cut(s) 144, 372, 573, 842, 1783, 3081
SexAI ACCWGGT 2 cut(s) 760, 847
SfaNI GCATC 7 cut(s) 891, 1420, 2220, 2365, 3160, 3436, 3543
SfcI CTRYAG 2 cut(s) 2590, 2744
SfoI GGCGCC 2 cut(s) 384, 696
SgrAI CRCCGGYG 1 cut(s) 385
SinI GGWCC 6 cut(s) 683, 782, 797, 1720, 2719, 3265
SmiMI CAYNNNNRTG 3 cut(s) 2226, 2670, 2871
SmlI CTYRAG 2 cut(s) 2936, 3538
SmoI CTYRAG 2 cut(s) 2936, 3538
SphI GCATGC 1 cut(s) 1330
SspDI GGCGCC 2 cut(s) 382, 694
SspI AATATT 1 cut(s) 3199
SspMI CTAG 5 cut(s) 203, 234, 1797, 2343, 3042
SstI GAGCTC 1 cut(s) 573
StyI CCWWGG 4 cut(s) 1046, 1796, 2091, 2680
TaaI ACNGT 8 cut(s) 113, 452, 629, 893, 1031, 2055, 3097, 3751
TaiI ACGT 9 cut(s) 42, 1387, 1668, 1708, 1786, 2194, 2488, 3166, 3250
TaqI TCGA 7 cut(s) 120, 306, 312, 422, 853, 1558, 2986
TaqII GACCGA 2 cut(s) 799, 3851
TatI WGTACW 3 cut(s) 323, 1802, 3233
TauI GCSGC 5 cut(s) 94, 97, 383, 438, 623
Tru1I TTAA 8 cut(s) 747, 884, 1094, 2367, 2937, 3476, 3539, 3687
Tru9I TTAA 8 cut(s) 747, 884, 1094, 2367, 2937, 3476, 3539, 3687
TscAI CASTG 2 cut(s) 457, 1851
TspGWI ACGGA 7 cut(s) 413, 1130, 1160, 1515, 1673, 2313, 2488
TspRI CASTG 2 cut(s) 457, 1851
Tth111I GACNNNGTC 1 cut(s) 1869
Van91I CCANNNNNTGG 3 cut(s) 779, 848, 1646
Vha464I CTTAAG 2 cut(s) 2936, 3538
VpaK11BI GGWCC 6 cut(s) 683, 782, 797, 1720, 2719, 3265
XagI CCTNNNNNAGG 2 cut(s) 852, 1559
XapI RAATTY 7 cut(s) 17, 301, 910, 983, 1817, 2403, 3289
XceI RCATGY 1 cut(s) 1330
XcmI CCANNNNNNNNNTGG 1 cut(s) 1015
XmaJI CCTAGG 1 cut(s) 1796
XmiI GTMKAC 2 cut(s) 1176, 2269
XmnI GAANNNNTTC 2 cut(s) 2181, 2739
XspI CTAG 5 cut(s) 203, 234, 1797, 2343, 3042
ZraI GACGTC 1 cut(s) 40
ZrmI AGTACT 2 cut(s) 325, 3235
Zsp2I ATGCAT 1 cut(s) 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.