Rh2AG014000

atfip1 v ,atfips5,fip1 v ,fips5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0009289
Physical Location & Seq
Forward (+)
1100274 .. 1108286
8013 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG014000.1

Sequence Viewer

Length: 3216 bp
ATGCAGTATGTGAGACCTGGTGCTGTGCCAATGCCTGCACCAACAACTTCTGGTCCTGGAGGAGTCCCGGGTCAAGTTCGTCCACTTGTAAACATGGGTCCAACACCTGGTCGAGGCAGAGGTGACTGGAGACCAACTGGATTAAAAAATGGTACCCCGCTGCAGAAAAATTTTCATTCGGGCTTTGGTACACCTGGTTGGGGAAACAATATGGGTGGTCGCGGTTTTGGGGGTGGACTTGAATTCACACTTCCTTCTCACAAGACCATATTTGATGTCGACATTGACGGTTTTGAGGAAAAACCTTGGAAATATCCTGGTGTTGATACTTCAGACTATTTCAACTTTGGATTGAATGAAGATAGCTGGAGAGATTATTGCAAACAGCTGGAACAGCTCCGCTTGGAGTCCACCATGCAAAGCAAAATCCGTGTTTATGAAAGTGGACGAACAGAACAGGAGTATGATCCAGATCTGCCTCCAGAATTGGCAGCAGCAACTGGTATGCATGACTTTCCTGCTGAAAATTCCAACCCTGGGAAGTCAGAGGGTGGGCAAAGTGATTTTGCAAAAGGATCTGCTCGCCTGCGTCCACCTATTCCAACTGGAAGAGCAATACAGGTGGAAAGTGGCTATGGTGAACGTTTCCCCTCAAGTGAAAACCGGCCACAGCGAATGCGTGACTCAGATGCTGTCATTGAAATTGTCTTGCAGGACTCTTTAGATGATGATTCTTCTGCAGGAAATGGTATCCCAGACGGAAGTGAAAACGATCCTTCAAAGGAGGGTGGAAGTGCTATTGGTGAGGGAGACCTTCCACAGGATGACAAGGCCTACTTCAATGGTTTTCCACAGGCTCACAATAATCGAAAGAGGGATCCACTTGAAAGAAAAAAGCCATTCAATGATAACGTGCCAGAAGATGATGAAAGCTTGCCCTTCAGTCCAGAAGGGCCAGTCCAACATGCTGGTTCTGGGGACCAGACTCCCAGTTCTGCTGGTGGTAGTTTTGGAGAAAATAGGGGGACACAGAGAAGAGCACGTGACAGATCTCCTCGTTTGACTCCTAGCCGGAATACAAGAGACAAGAAATTTCCTGACAGTCAAAAGGAAGGATCAGTGGAAAGCGTGGATGGTAGACGTAGTCCGTTGATCTCATCCCCCGCCTCACATGGGGCTGCCCGCGAGTCAAGTGTCGAGCATAGAGGCGGTGACCAAGATGAGACTCTGCTGGGTGATGAAAACTCTGGAATGGAAAAGGAGGAAATGGCTGTGAATGTAACTGATGATGCCCATGATGGAGTTCCAAACTATCAAAAGTTGAGTTCACGAGTTGACCAGTCTGCTGATGAAGAACTTGATGATGGCGAAGACTCCAAGGCTGCAAGAAGTAGTGACAACAGCAAAGCAAGATCAGGAAGCAGTAGAGATTATCAGAAGTGGAGGGATGGGGTTGAGGAGGAAGTCATTCAAGGACGTTCAGCTCACTCGGGAGGCATTAAGAGTCACCTTGATGAAAAGGAACAGGGATTCCAAAGAAAAGGCCGTGATGGTAGACAGGAACTGGATAGAAGTCACGTGTTAGTCAAAGGGAGGGAGGGTTCTTATCCGTACAGGGATTGGGATCCTAGCTCTGCTCATCATTTGCAATTGAAAAATGATGGGCTTAATAGGCGAAAAGAGAGGGAAAATCTTGACGGAGCATGGCAAAGGAGGGATGATGATCCTTATAGCAGAAGGATTAGAACTGAAGAACCAAGGAAGAGGGAACGTGGTGATGAAATGGGATCCAGGCACAGAAGTAAGGTTCGTGAAAGCGAGAGGAGTGACAAAGATGAATATATGCAGTCAAGAAAGCAGTTAGATAATGGCAGCTATAGGGTCTTTTATGATAAGGATGTTGGATCACGACCCAGGGAAAGAGAAGATAGTTTGAAGGGCAGGTATGAACATATAGATGATTACCATGGCAAGAGAAGGAAAGATGAGGAATACATGAGGAGGGACCAAATAGATAAAGAAGAACTTCTGCAGGGCCACAGAGATACTACCACTCGCCGAAAGCGGGAAAGGGATGAAGTTTTAGATCAGCGTAAAAGAGATGACCAGCAGAAAGTCAGGGATAATCCTGATGACCACCACTCTGTCAGGCACAAAGATGAAAGCTGGTTGCCAAGGGAGAGAGGTGACAGACAAAGAGAAAGGGAGGAGTGGCATAGGCTTAAGCAATCCCATGAAGAAAATATACCCAAGAGGGAAAGAGATGATGGACGAGTTTCTGTAAGGGGTGGGCGTGCTGCAGAAGACAAAGCATGGGTAGGCCATGCTAGGGCAAAGGATGAGAACAAGGGCTCTGATAAGGAGTACCAATATAAAGAGACTGTGCGACACAGTGAGCAGTCTAAAAGAAGGGATAGGGTTGAGGAGGAAAGTTCACATCATAGGGGGCGTGAGGATGCTCATGCACGGGGAAATCAAATGAATATTGATGAGAGGAGATCTGGCAAGGAGAGATCAAGTACTCGCAGTGAACGTGGTGATAGCCAAAAAGTCCAAGATAGAAAACATAAAGAGAATTCAAGAAGGAATAAAGAAACTGAAATTGCTGATATCAACACTTCTGTCACTTCCAAGAGACATCAAGAAGACCAAAGTGGTCGTAGCAAGGAGATGGGCTTGAAAGGCACCCGTGAGCAAGGACCTGGTCACTCTTCTAAAAGGCACAGGGAAGATGGTTCCTCTGATGATGAGCAGCAGGATTTAAAAAAGGGGCGCTCAAAATTGGAACGATGGACAAGTCATAAGGAGAGGGATTTCAGTATCAACAGTAAGGTATCCTCTACCTTAAAGTCCAAAGAGCTTGATAGGGGATCCTCAGATGCCAGTAAACTTCCAGATGATTCCAAGCCAGTTGAGGCTGTTGATAACCATCACCCGTTGGCTGAGGAGAATACTGGTGATCAGGATATTAAGGATGTTGACACAAAACCATTAGATACAGACACGGCATTGGAGGGTCGTCACCTGGACACAGTTGAGAAGTTGAAGAAACGAAGTGAGCGCTTCAAGCATCCATTGCCAAGTGAAAAAGAACCCTCAACAATTAAAAAGACTGAGACTGAAGTGCTGCCAACCCCTAATAGTGACCCTCCTGTGGTGGAAACTGAGATTAAACCAGAACGGCCAGCTCGGAAAAGGAGATGGATCAGCAACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005515 GO:0042802 GO:0097159 GO:1901363
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Fip1

Protein Analysis

1071

Amino Acids

121.92

Weight (kDa)

6.28

Isoelectric Point (pI)

57.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Fip1 PF05182 92 - 134 2e-21 Fip1 motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1932
Acc65I GGTACC 1 cut(s) 152
AccB1I GGYRCC 2 cut(s) 152, 2684
AccB7I CCANNNNNTGG 1 cut(s) 107
AccI GTMKAC 3 cut(s) 279, 1138, 1555
AccII CGCG 2 cut(s) 222, 1185
AciI CCGC 7 cut(s) 158, 222, 400, 1164, 1183, 1209, 2065
AclI AACGTT 1 cut(s) 643
AcoI YGGCCR 2 cut(s) 665, 3182
AcsI RAATTY 5 cut(s) 169, 242, 526, 1091, 2575
AcuI CTGAAG 4 cut(s) 315, 925, 1770, 3141
AcvI CACGTG 2 cut(s) 1043, 1579
AfaI GTAC 5 cut(s) 154, 190, 1613, 2366, 2521
AfeI AGCGCT 1 cut(s) 3062
AfiI CCNNNNNNNGG 9 cut(s) 107, 113, 200, 537, 820, 1173, 2065, 2329, 3154
AflII CTTAAG 1 cut(s) 2222
AflIII ACRYGT 1 cut(s) 1578
AloI GAACNNNNNNTCC 4 cut(s) 1515, 1547, 1585, 1617
Alw21I GWGCWC 1 cut(s) 1042
Alw26I GTCTC 8 cut(s) 7, 124, 804, 1077, 1217, 2372, 2629, 3110
AlwNI CAGNNNCTG 3 cut(s) 500, 692, 1564
Ama87I CYCGRG 2 cut(s) 67, 1489
Aor51HI AGCGCT 1 cut(s) 3062
AoxI GGCC 7 cut(s) 665, 831, 953, 1543, 2035, 2320, 3182
ApeKI GCWGC 9 cut(s) 160, 491, 494, 1178, 1382, 1872, 2297, 2752, 3127
ApoI RAATTY 5 cut(s) 169, 242, 526, 1091, 2575
Asp700I GAANNNNTTC 2 cut(s) 1467, 2025
Asp718I GGTACC 1 cut(s) 152
AspLEI GCGC 2 cut(s) 2775, 3063
AspS9I GGNCC 7 cut(s) 53, 98, 953, 979, 2005, 2035, 2699
AsuC2I CCSGG 2 cut(s) 68, 69
AvaI CYCGRG 2 cut(s) 67, 1489
AvaII GGWCC 5 cut(s) 53, 98, 979, 2005, 2699
BamHI GGATCC 4 cut(s) 877, 1624, 1787, 2870
BanI GGYRCC 2 cut(s) 152, 2684
BanII GRGCYC 1 cut(s) 2354
BarI GAAGNNNNNNTAC 2 cut(s) 2229, 2261
BauI CACGAG 1 cut(s) 1329
BbrPI CACGTG 2 cut(s) 1043, 1579
BbsI GAAGAC 3 cut(s) 1377, 2310, 2652
Bbv12I GWGCWC 1 cut(s) 1042
BbvCI CCTCAGC 1 cut(s) 2943
BbvI GCAGC 9 cut(s) 147, 503, 506, 1165, 1369, 1884, 2284, 2764, 3114
BceAI ACGGC 3 cut(s) 1530, 3021, 3197
BciVI GTATCC 2 cut(s) 761, 2845
BclI TGATCA 1 cut(s) 2959
BcnI CCSGG 2 cut(s) 68, 69
BcoDI GTCTC 8 cut(s) 7, 124, 804, 1077, 1217, 2372, 2629, 3110
BfaI CTAG 3 cut(s) 1068, 1629, 2328
BfmI CTRYAG 5 cut(s) 161, 738, 1876, 2030, 2298
BfoI RGCGCY 2 cut(s) 2776, 3064
BfrI CTTAAG 1 cut(s) 2222
BfuAI ACCTGC 1 cut(s) 1932
BfuI GTATCC 2 cut(s) 761, 2845
BglII AGATCT 3 cut(s) 472, 1049, 2498
BisI GCNGC 9 cut(s) 161, 492, 495, 1179, 1383, 1873, 2298, 2753, 3128
BlsI GCNGC 9 cut(s) 162, 493, 496, 1180, 1384, 1874, 2299, 2754, 3129
BmcAI AGTACT 1 cut(s) 2521
Bme18I GGWCC 5 cut(s) 53, 98, 979, 2005, 2699
BmeT110I CYCGRG 2 cut(s) 67, 1489
BmgT120I GGNCC 7 cut(s) 53, 98, 953, 979, 2005, 2035, 2699
BmrI ACTGGG 1 cut(s) 984
BmsI GCATC 5 cut(s) 679, 1279, 2446, 2869, 3079
BmuI ACTGGG 1 cut(s) 984
BpiI GAAGAC 3 cut(s) 1377, 2310, 2652
BpmI CTGGAG 4 cut(s) 78, 148, 388, 465
Bpu10I CCTNAGC 1 cut(s) 2943
BpuEI CTTGAG 1 cut(s) 637
BpuMI CCSGG 2 cut(s) 68, 69
BsaAI YACGTR 2 cut(s) 1043, 1579
BsaBI GATNNNNATC 4 cut(s) 471, 1623, 1722, 2928
BsaI GGTCTC 3 cut(s) 7, 124, 804
BsaXI ACNNNNNCTCC 2 cut(s) 1585, 1615
Bsc4I CCNNNNNNNGG 9 cut(s) 107, 113, 200, 537, 820, 1173, 2065, 2329, 3154
Bse118I RCCGGY 1 cut(s) 663
Bse3DI GCAATG 1 cut(s) 3074
Bse8I GATNNNNATC 4 cut(s) 471, 1623, 1722, 2928
BseJI GATNNNNATC 4 cut(s) 471, 1623, 1722, 2928
BseLI CCNNNNNNNGG 9 cut(s) 107, 113, 200, 537, 820, 1173, 2065, 2329, 3154
BseMI GCAATG 1 cut(s) 3074
BseMII CTCAG 5 cut(s) 699, 2889, 2934, 3105, 3156
BseRI GAGGAG 9 cut(s) 75, 1044, 1472, 1837, 2014, 2222, 2438, 2509, 2960
BseXI GCAGC 9 cut(s) 147, 503, 506, 1165, 1369, 1884, 2284, 2764, 3114
BseYI CCCAGC 1 cut(s) 1231
BsgI GTGCAG 1 cut(s) 21
Bsh1236I CGCG 2 cut(s) 222, 1185
BshFI GGCC 7 cut(s) 667, 833, 955, 1545, 2037, 2322, 3184
BshNI GGYRCC 2 cut(s) 152, 2684
BsiHKAI GWGCWC 1 cut(s) 1042
BsiHKCI CYCGRG 2 cut(s) 67, 1489
BsiSI CCGG 3 cut(s) 68, 664, 1072
BslFI GGGAC 4 cut(s) 50, 992, 1039, 2018
BslI CCNNNNNNNGG 9 cut(s) 107, 113, 200, 537, 820, 1173, 2065, 2329, 3154
BsmAI GTCTC 8 cut(s) 7, 124, 804, 1077, 1217, 2372, 2629, 3110
BsmFI GGGAC 4 cut(s) 50, 992, 1039, 2018
BsmI GAATGC 1 cut(s) 681
BsnI GGCC 7 cut(s) 667, 833, 955, 1545, 2037, 2322, 3184
Bso31I GGTCTC 3 cut(s) 7, 124, 804
BsoBI CYCGRG 2 cut(s) 67, 1489
Bsp1286I GDGCHC 2 cut(s) 1042, 2354
Bsp19I CCATGG 1 cut(s) 1966
BspACI CCGC 7 cut(s) 158, 222, 400, 1164, 1183, 1209, 2065
BspANI GGCC 7 cut(s) 667, 833, 955, 1545, 2037, 2322, 3184
BspCNI CTCAG 5 cut(s) 698, 2888, 2935, 3106, 3157
BspFNI CGCG 2 cut(s) 222, 1185
BspMAI CTGCAG 4 cut(s) 165, 742, 2034, 2302
BspMI ACCTGC 1 cut(s) 1932
BspQI GCTCTTC 2 cut(s) 604, 1030
BspT107I GGYRCC 2 cut(s) 152, 2684
BspTI CTTAAG 1 cut(s) 2222
BspTNI GGTCTC 3 cut(s) 7, 124, 804
BsrDI GCAATG 1 cut(s) 3074
BsrFI RCCGGY 1 cut(s) 663
BssAI RCCGGY 1 cut(s) 663
BssSI CACGAG 1 cut(s) 1329
BssT1I CCWWGG 5 cut(s) 305, 1377, 1757, 1966, 2174
Bst2BI CACGAG 1 cut(s) 1329
Bst4CI ACNGT 6 cut(s) 290, 1103, 2383, 2393, 2828, 3034
Bst6I CTCTTC 4 cut(s) 604, 1030, 1757, 2716
BstAFI CTTAAG 1 cut(s) 2222
BstAPI GCANNNNNTGC 1 cut(s) 3076
BstBAI YACGTR 2 cut(s) 1043, 1579
BstC8I GCNNGC 7 cut(s) 36, 583, 587, 935, 1183, 2295, 3186
BstDEI CTNAG 5 cut(s) 685, 2875, 2943, 3114, 3165
BstDSI CCRYGG 1 cut(s) 1966
BstEII GGTNACC 1 cut(s) 1211
BstENI CCTNNNNNAGG 2 cut(s) 111, 818
BstFNI CGCG 2 cut(s) 222, 1185
BstH2I RGCGCY 2 cut(s) 2776, 3064
BstHHI GCGC 2 cut(s) 2775, 3063
BstMAI GTCTC 8 cut(s) 7, 124, 804, 1077, 1217, 2372, 2629, 3110
BstMWI GCNNNNNNNGC 5 cut(s) 394, 1672, 2682, 3067, 3076
BstNSI RCATGY 1 cut(s) 968
BstPI GGTNACC 1 cut(s) 1211
BstSFI CTRYAG 5 cut(s) 161, 738, 1876, 2030, 2298
BstUI CGCG 2 cut(s) 222, 1185
BstV1I GCAGC 9 cut(s) 147, 503, 506, 1165, 1369, 1884, 2284, 2764, 3114
BstV2I GAAGAC 3 cut(s) 1377, 2310, 2652
BstX2I RGATCY 8 cut(s) 472, 575, 877, 1049, 1624, 1787, 2498, 2870
BstXI CCANNNNNNTGG 1 cut(s) 968
BstYI RGATCY 8 cut(s) 472, 575, 877, 1049, 1624, 1787, 2498, 2870
BsuI GTATCC 2 cut(s) 761, 2845
BsuRI GGCC 7 cut(s) 667, 833, 955, 1545, 2037, 2322, 3184
BtgI CCRYGG 1 cut(s) 1966
BtsI GCAGTG 1 cut(s) 2533
BtsIMutI CAGTG 3 cut(s) 1125, 2398, 2533
BveI ACCTGC 1 cut(s) 1932
Cac8I GCNNGC 7 cut(s) 36, 583, 587, 935, 1183, 2295, 3186
CaiI CAGNNNCTG 3 cut(s) 500, 692, 1564
CfoI GCGC 2 cut(s) 2775, 3063
Cfr10I RCCGGY 1 cut(s) 663
Cfr13I GGNCC 7 cut(s) 53, 98, 953, 979, 2005, 2035, 2699
Cfr9I CCCGGG 1 cut(s) 67
CseI GACGC 1 cut(s) 578
CsiI ACCWGGT 4 cut(s) 16, 106, 193, 2701
Csp6I GTAC 5 cut(s) 153, 189, 1612, 2365, 2520
CspCI CAANNNNNGTGG 4 cut(s) 196, 231, 603, 638
CviQI GTAC 5 cut(s) 153, 189, 1612, 2365, 2520
DdeI CTNAG 5 cut(s) 685, 2875, 2943, 3114, 3165
DraI TTTAAA 1 cut(s) 2763
EaeI YGGCCR 2 cut(s) 665, 3182
Eam1104I CTCTTC 4 cut(s) 604, 1030, 1757, 2716
EarI CTCTTC 4 cut(s) 604, 1030, 1757, 2716
Eco130I CCWWGG 5 cut(s) 305, 1377, 1757, 1966, 2174
Eco147I AGGCCT 1 cut(s) 833
Eco24I GRGCYC 1 cut(s) 2354
Eco31I GGTCTC 3 cut(s) 7, 124, 804
Eco32I GATATC 1 cut(s) 2611
Eco47I GGWCC 5 cut(s) 53, 98, 979, 2005, 2699
Eco47III AGCGCT 1 cut(s) 3062
Eco57I CTGAAG 4 cut(s) 315, 925, 1770, 3141
Eco72I CACGTG 2 cut(s) 1043, 1579
Eco88I CYCGRG 2 cut(s) 67, 1489
Eco91I GGTNACC 1 cut(s) 1211
EcoNI CCTNNNNNAGG 2 cut(s) 111, 818
EcoO109I RGGNCCY 1 cut(s) 2699
EcoO65I GGTNACC 1 cut(s) 1211
EcoRI GAATTC 2 cut(s) 242, 2575
EcoRV GATATC 1 cut(s) 2611
EcoT14I CCWWGG 5 cut(s) 305, 1377, 1757, 1966, 2174
EcoT22I ATGCAT 1 cut(s) 510
EcoT38I GRGCYC 1 cut(s) 2354
ErhI CCWWGG 5 cut(s) 305, 1377, 1757, 1966, 2174
FalI AAGNNNNNCTT 4 cut(s) 821, 853, 2010, 2042
FaqI GGGAC 4 cut(s) 50, 992, 1039, 2018
FauI CCCGC 4 cut(s) 165, 1171, 1190, 2058
FbaI TGATCA 1 cut(s) 2959
FblI GTMKAC 3 cut(s) 279, 1138, 1555
Fnu4HI GCNGC 9 cut(s) 161, 492, 495, 1179, 1383, 1873, 2298, 2753, 3128
FriOI GRGCYC 1 cut(s) 2354
Fsp4HI GCNGC 9 cut(s) 161, 492, 495, 1179, 1383, 1873, 2298, 2753, 3128
FspBI CTAG 3 cut(s) 1068, 1629, 2328
GlaI GCGC 2 cut(s) 2774, 3062
GluI GCNGC 9 cut(s) 161, 492, 495, 1179, 1383, 1873, 2298, 2753, 3128
GsaI CCCAGC 1 cut(s) 1235
GsuI CTGGAG 4 cut(s) 78, 148, 388, 465
HaeII RGCGCY 2 cut(s) 2776, 3064
HaeIII GGCC 7 cut(s) 667, 833, 955, 1545, 2037, 2322, 3184
HapII CCGG 3 cut(s) 68, 664, 1072
HgaI GACGC 1 cut(s) 578
HhaI GCGC 2 cut(s) 2775, 3063
Hin6I GCGC 2 cut(s) 2773, 3061
HinP1I GCGC 2 cut(s) 2773, 3061
HincII GTYRAC 3 cut(s) 280, 1336, 2980
HindII GTYRAC 3 cut(s) 280, 1336, 2980
HindIII AAGCTT 1 cut(s) 931
HpaII CCGG 3 cut(s) 68, 664, 1072
Hpy188I TCNGA 8 cut(s) 334, 547, 688, 1437, 2356, 2743, 2878, 3192
HpyCH4III ACNGT 6 cut(s) 290, 1103, 2383, 2393, 2828, 3034
HpyCH4IV ACGT 8 cut(s) 643, 912, 1042, 1141, 1477, 1578, 1771, 2533
HpyF10VI GCNNNNNNNGC 5 cut(s) 394, 1672, 2682, 3067, 3076
HpyF3I CTNAG 5 cut(s) 685, 2875, 2943, 3114, 3165
HpySE526I ACGT 8 cut(s) 643, 912, 1042, 1141, 1477, 1578, 1771, 2533
HspAI GCGC 2 cut(s) 2773, 3061
KpnI GGTACC 1 cut(s) 156
Ksp22I TGATCA 1 cut(s) 2959
LguI GCTCTTC 2 cut(s) 604, 1030
LmnI GCTCC 2 cut(s) 402, 1700
Lsp1109I GCAGC 9 cut(s) 147, 503, 506, 1165, 1369, 1884, 2284, 2764, 3114
LweI GCATC 5 cut(s) 679, 1279, 2446, 2869, 3079
MabI ACCWGGT 4 cut(s) 16, 106, 193, 2701
MaeI CTAG 3 cut(s) 1068, 1629, 2328
MaeII ACGT 8 cut(s) 643, 912, 1042, 1141, 1477, 1578, 1771, 2533
MfeI CAATTG 1 cut(s) 1649
MflI RGATCY 8 cut(s) 472, 575, 877, 1049, 1624, 1787, 2498, 2870
MhlI GDGCHC 2 cut(s) 1042, 2354
MmeI TCCRAC 5 cut(s) 125, 555, 626, 985, 1882
Mph1103I ATGCAT 1 cut(s) 510
MroXI GAANNNNTTC 2 cut(s) 1467, 2025
MseI TTAA 9 cut(s) 143, 1500, 1668, 2223, 2762, 2846, 2970, 3105, 3171
MslI CAYNNNNRTG 3 cut(s) 1512, 1956, 2157
MspA1I CMGCKG 2 cut(s) 160, 388
MspCI CTTAAG 1 cut(s) 2222
MspI CCGG 3 cut(s) 68, 664, 1072
MunI CAATTG 1 cut(s) 1649
Mva1269I GAATGC 1 cut(s) 681
MvnI CGCG 2 cut(s) 222, 1185
MwoI GCNNNNNNNGC 5 cut(s) 394, 1672, 2682, 3067, 3076
NciI CCSGG 2 cut(s) 68, 69
NcoI CCATGG 1 cut(s) 1966
NsiI ATGCAT 1 cut(s) 510
NspI RCATGY 1 cut(s) 968
PasI CCCWGGG 2 cut(s) 536, 1914
PceI AGGCCT 1 cut(s) 833
PciSI GCTCTTC 2 cut(s) 604, 1030
PcsI WCGNNNNNNNCGW 1 cut(s) 2530
PctI GAATGC 1 cut(s) 681
PdmI GAANNNNTTC 2 cut(s) 1467, 2025
PfeI GAWTC 3 cut(s) 731, 1530, 2900
PflFI GACNNNGTC 2 cut(s) 1143, 2703
PflMI CCANNNNNTGG 1 cut(s) 107
PfoI TCCNGGA 1 cut(s) 55
PkrI GCNGC 9 cut(s) 162, 493, 496, 1180, 1384, 1874, 2299, 2754, 3129
PmaCI CACGTG 2 cut(s) 1043, 1579
PmlI CACGTG 2 cut(s) 1043, 1579
Ppu21I YACGTR 2 cut(s) 1043, 1579
PpuMI RGGWCCY 1 cut(s) 2699
Psp1406I AACGTT 1 cut(s) 643
Psp5II RGGWCCY 1 cut(s) 2699
PspCI CACGTG 2 cut(s) 1043, 1579
PspEI GGTNACC 1 cut(s) 1211
PspFI CCCAGC 1 cut(s) 1231
PspPI GGNCC 7 cut(s) 53, 98, 953, 979, 2005, 2035, 2699
PspPPI RGGWCCY 1 cut(s) 2699
PstI CTGCAG 4 cut(s) 165, 742, 2034, 2302
PstNI CAGNNNCTG 3 cut(s) 500, 692, 1564
PsuI RGATCY 8 cut(s) 472, 575, 877, 1049, 1624, 1787, 2498, 2870
PsyI GACNNNGTC 2 cut(s) 1143, 2703
PvuII CAGCTG 1 cut(s) 388
RsaI GTAC 5 cut(s) 154, 190, 1613, 2366, 2521
RsaNI GTAC 5 cut(s) 153, 189, 1612, 2365, 2520
RseI CAYNNNNRTG 3 cut(s) 1512, 1956, 2157
SalI GTCGAC 1 cut(s) 278
SapI GCTCTTC 2 cut(s) 604, 1030
SaqAI TTAA 9 cut(s) 143, 1500, 1668, 2223, 2762, 2846, 2970, 3105, 3171
SatI GCNGC 9 cut(s) 161, 492, 495, 1179, 1383, 1873, 2298, 2753, 3128
Sau96I GGNCC 7 cut(s) 53, 98, 953, 979, 2005, 2035, 2699
ScaI AGTACT 1 cut(s) 2521
SduI GDGCHC 2 cut(s) 1042, 2354
SexAI ACCWGGT 4 cut(s) 16, 106, 193, 2701
SfaNI GCATC 5 cut(s) 679, 1279, 2446, 2869, 3079
SfcI CTRYAG 5 cut(s) 161, 738, 1876, 2030, 2298
SinI GGWCC 5 cut(s) 53, 98, 979, 2005, 2699
SmaI CCCGGG 1 cut(s) 69
SmiMI CAYNNNNRTG 3 cut(s) 1512, 1956, 2157
SmlI CTYRAG 2 cut(s) 652, 2222
SmoI CTYRAG 2 cut(s) 652, 2222
SseBI AGGCCT 1 cut(s) 833
SsiI CCGC 7 cut(s) 158, 222, 400, 1164, 1183, 1209, 2065
SspI AATATT 1 cut(s) 2485
SspMI CTAG 3 cut(s) 1068, 1629, 2328
StuI AGGCCT 1 cut(s) 833
StyI CCWWGG 5 cut(s) 305, 1377, 1757, 1966, 2174
TaaI ACNGT 6 cut(s) 290, 1103, 2383, 2393, 2828, 3034
TaiI ACGT 8 cut(s) 646, 915, 1045, 1144, 1480, 1581, 1774, 2536
TaqI TCGA 4 cut(s) 112, 279, 868, 1197
TatI WGTACW 1 cut(s) 2519
TfiI GAWTC 3 cut(s) 731, 1530, 2900
Tru1I TTAA 9 cut(s) 143, 1500, 1668, 2223, 2762, 2846, 2970, 3105, 3171
Tru9I TTAA 9 cut(s) 143, 1500, 1668, 2223, 2762, 2846, 2970, 3105, 3171
TscAI CASTG 3 cut(s) 1125, 2398, 2533
TseI GCWGC 9 cut(s) 160, 491, 494, 1178, 1382, 1872, 2297, 2752, 3127
TspGWI ACGGA 5 cut(s) 419, 774, 1137, 1599, 1713
TspMI CCCGGG 1 cut(s) 67
TspRI CASTG 3 cut(s) 1125, 2398, 2533
Tth111I GACNNNGTC 2 cut(s) 1143, 2703
Van91I CCANNNNNTGG 1 cut(s) 107
Vha464I CTTAAG 1 cut(s) 2222
VpaK11BI GGWCC 5 cut(s) 53, 98, 979, 2005, 2699
XagI CCTNNNNNAGG 2 cut(s) 111, 818
XapI RAATTY 5 cut(s) 169, 242, 526, 1091, 2575
XceI RCATGY 1 cut(s) 968
XmaI CCCGGG 1 cut(s) 67
XmiI GTMKAC 3 cut(s) 279, 1138, 1555
XmnI GAANNNNTTC 2 cut(s) 1467, 2025
XspI CTAG 3 cut(s) 1068, 1629, 2328
ZrmI AGTACT 1 cut(s) 2521
Zsp2I ATGCAT 1 cut(s) 510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.