Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0008037

Physical Location & Seq

Genomic Coordinates Forward (+)

2554777 .. 2558407

Gene Structure 3631 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g04830.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2409 bp

ATGGCCCAAGCGGCGAGGCTCAGCCTCCGATTGCAGAAAGAGCTCAAGCTCCTCCTCACCGACCCTCCTCCCGGCGCCTCCTTCCCTCTCCTCTCATCCTCCTCCTCCTTATCCTCCATCCTCGCCCAGATTCAAGGCCCGGAAGGAACTGTCTACGCCGGTGGGCTGTTCAACATCAAGATTGAGATACCGGATAGGTATCCGTTTCAGCCTCCAAGTGTGACATTTGCGACGCCGATTTACCACCCGAATATCGACACCGGTGGCAGGATTTGCCTTGACATTCTCAACCTCCCTCCAAAGGGAGCGTGGCAGCCGTCGTTGAACATTTCGACTGTGCTTACTAGCATTGGTTTGTTGTTGAGTGAGCCGAATCCTGATGATGGGCTTATGTGTGAAGCGAGTAGGGAGTTCAAATACAATAGACAAGCTTTTGATCAGAAAGCTCGGTCTATGACTGAGAAGTATGCCCAGGCTGGAGCTAATGGGAGTAGTGTTTGTGACGGCCAATTTGAAAGCCTAGCAAGTCTAAACTCGCTGGAGGTGGATACGACAGGGCATGAGTCGAAACATCCAGCAAATGAGTCTGTTGTGCAGCTGGAGGTTAAAACATCTAGCCACGGCTTAAAACATGATGCAAATTTGTCTGTTACAAGTCACAAGAAGTTAATTGGGATGAGTAGGAAGCTGTCGCTTGAGTCTTCAGTCCCAGCTTGGGAAAGAGATGCTCATAAGGAAGTGCCTAAAGACCAGATGGAAGTTGAAGGATCAGAAAAGTTGCTGAAAGATAATCCTAATAAGTGCACTCTAAGTCAGGAGAAGCTATGTGGGAGCAGACGGAAGTTGTCACTAGGATCTTTTAGCCAATCCCAGGAGAAAAGTGACCATGGCATTGAGAATAATCCTAGTAAGTGCAATCTAAGTCAGGAGGAGCTATGTGGGAGCAGAAGGAAGTTATCACTAGGATCTTTCAGCCAATCCCAGGAGAAAAGTGACAATGACATTGGGAAGGTGGATCACTGTTCATCTGTTGAACAACAGAACGTTCCTATGCCATCTTCCGGAAAATATCTGCCACTATCAGGAAATGCTTACAAGCAAGGGCTTCATCCGAGTCAAGATAGTAAATTGGTAGATGACAACATAAACAAGGGATCAAAGAGGCTGAGGTTTGGGAACAAGCAATCATTGGGTTCATTGAGCACAAATCAAATGATTAGTGAAAAGACAGATGAAATGATTGTTACCCCTCAACTGCCGCCTTCTCAACCCCATACCAATGTGTTATCTGAGCCTTTGCCAGCAGCCCCAGCTCTTGACAGAGTCAAACGGCAACCAAATACACATACGATTGATGGAATGGGAAATGCCACTAGCGACGCTAGTCGCAAGAGGCTTTGTTTAACTGGCAAGAAGCTTTCACTTGGATTTAGAGGCTCATTGCAGGCACAGGGAAAGGATAACAAGGAGAATGTCGTGCCACATATGAGCGAGTTTAATGGCATTGGATCAAAGAATGGTGGTGAAAATGCCACCCATAAGAAACTTGGGATTGCACACTTGGAAGAGAACAACAGCAATATGCATCTCTCTTCAAATCCATCCAAGTCCCTTCCTAAGCAACACCAGGACTTCAGGGCAGCTGAGAAGCAGCATCAAGACTACACTGACACTACCGCAACAACTAAGCAAAAGAAAGCCGAAGAACCATCAATACTTGAGTCAGAGTCAGTAATTGTGTTGGACAGTGAAGACAGCGAGGAAGAAAATAGCAGTCGTGTGAAATCTAAACCAGTGCTAGCTCGAAAGCGCCTGGGAAGGTGGAGAGTTGTCACAGGTAGAGACGAGAGAGAGAGAGGTAAGAGAGCGTTGTGGGTGAGGCGGTTGGCCTTGGCCTTTCATAGTTTTCATGTCCTTTGTGGGCGGCCGAAACTGAAAGCTCAAAGCCGAAACAGCCAACCTCAAACTCAAACTCAGATAGAACTGATGGCTTCTCATAGTCTCTCAACGCTGAGCGTATCTCCCACTTGGAGTTGGAGAAGACAACCTCCTTCAGCTTCACCTAGTACTACTACTGTTTCAGTATCTTCATCCGCATCTTTCGCTTCTCGCCGGCGCCGCAGCCACGTGGTCCGTATGGCCCCGGAGGAGGAGAAGCTCACTCGCCGCAACCCTCTCGATTTCCCAATTGAGTGGGAGAGGCCTAAACCAGGGCGGAGACCGGATATTTTCCCACAGTTTAGTCCTATGAAGACACCATTACCGCCGCCGATGCCGTATGACCCGCCGGAGGAAGATGAGGAGGAGGAGGAGAAGAAAGAGGAGGAAGAGGAGCAAGAGCAAGAAGAGGAGGATCCGGAAAAGATTGACCCAGATAAGAATACTTCTTCTGTCTTTGGGTTCTGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000209 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019899 GO:0031625 GO:0032446 GO:0033554 GO:0036211 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044389 GO:0044424 GO:0044464 GO:0050896 GO:0051716 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03460 map03460

Pfam Domains

Protein Families

UQ_con

Protein Analysis

803

Amino Acids

88.98

Weight (kDa)

7.64

Isoelectric Point (pI)

67.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UQ_con	PF00179	10 - 151	4e-40	Ubiquitin-conjugating enzyme

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008037)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G24515 AT3G24515 AT3G24515 AT3G24515
fragaria_vesca	FvH4_1g04830 FvH4_1g04830 FvH4_4g32890
malus_domestica	MD08G1128600.v1.1 MD14G1109900.v1.1 MD15G1186000.v1.1
prunus_persica	Prupe.7G230900_v2.0.a1
pyrus_communis	pycom15g16670
rosa_chinensis	RchiOBHm_Chr2g0090471
rosa_laevigata	RLG00000016116
rosa_multiflora	Rmu_sc0004514.1_g000022 Rmu_sc0014034.1_g000001
rosa_roxburghii	Rroxscaffold_2G00151110
rosa_rugosa	Rorug02G0008200 Rorug02G0008300
rosa_samantha	Rh2AG053700 Rh2BG053200 Rh2CG055300 Rh2DG053900
rosa_wichuraiana	Rw2G004330

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	74, 2115
AccI	GTMKAC	1 cut(s)	153
AccIII	TCCGGA	2 cut(s)	1061, 2356
AclI	AACGTT	1 cut(s)	1044
AclWI	GGATC	8 cut(s)	775, 862, 973, 1023, 1162, 1516, 2348, 2361
AcoI	YGGCCR	2 cut(s)	505, 1925
AcsI	RAATTY	1 cut(s)	640
AcuI	CTGAAG	3 cut(s)	687, 1618, 2037
AcvI	CACGTG	1 cut(s)	2128
AcyI	GRCGYC	3 cut(s)	75, 233, 2116
AfaI	GTAC	1 cut(s)	2068
AgeI	ACCGGT	1 cut(s)	260
AgsI	TTSAA	8 cut(s)	134, 172, 325, 415, 515, 764, 1034, 1596
AjnI	CCWGG	6 cut(s)	471, 870, 981, 1626, 1812, 2209
Alw21I	GWGCWC	3 cut(s)	45, 806, 1205
Alw26I	GTCTC	3 cut(s)	1836, 2006, 2212
Alw44I	GTGCAC	1 cut(s)	802
AlwI	GGATC	8 cut(s)	775, 862, 973, 1023, 1162, 1516, 2348, 2361
Aor13HI	TCCGGA	2 cut(s)	1061, 2356
AoxI	GGCC	8 cut(s)	3, 136, 505, 1887, 1893, 1925, 2139, 2201
ApaLI	GTGCAC	1 cut(s)	802
ApeKI	GCWGC	6 cut(s)	313, 595, 1304, 1640, 1651, 2121
ApoI	RAATTY	1 cut(s)	640
ArsI	GACNNNNNNTTYG	2 cut(s)	494, 526
AsiGI	ACCGGT	1 cut(s)	260
AspLEI	GCGC	3 cut(s)	77, 1812, 2118
AspS9I	GGNCC	4 cut(s)	4, 137, 2131, 2140
AsuC2I	CCSGG	3 cut(s)	72, 140, 2144
AsuHPI	GGTGA	4 cut(s)	49, 1535, 1888, 2052
AsuNHI	GCTAGC	1 cut(s)	1798
AvaII	GGWCC	1 cut(s)	2131
BaeGI	GKGCMC	1 cut(s)	806
BamHI	GGATCC	1 cut(s)	2353
BanI	GGYRCC	2 cut(s)	74, 2115
BanII	GRGCYC	1 cut(s)	45
BbrPI	CACGTG	1 cut(s)	2128
BbsI	GAAGAC	4 cut(s)	693, 1758, 2047, 2258
Bbv12I	GWGCWC	3 cut(s)	45, 806, 1205
BbvCI	CCTCAGC	1 cut(s)	1166
BbvI	GCAGC	6 cut(s)	325, 607, 1316, 1652, 1663, 2133
BccI	CCATC	8 cut(s)	125, 377, 748, 1063, 1349, 1609, 1717, 1981
BceAI	ACGGC	5 cut(s)	301, 520, 637, 1346, 2260
BcgI	CGANNNNNNTGC	2 cut(s)	2158, 2192
BciT130I	CCWGG	6 cut(s)	473, 872, 983, 1628, 1814, 2211
BciVI	GTATCC	2 cut(s)	210, 541
BclI	TGATCA	1 cut(s)	436
BcnI	CCSGG	3 cut(s)	72, 140, 2144
BcoDI	GTCTC	3 cut(s)	1836, 2006, 2212
BfoI	RGCGCY	3 cut(s)	78, 1813, 2119
BfuI	GTATCC	2 cut(s)	210, 541
BglI	GCCNNNNNGGC	1 cut(s)	11
BlpI	GCTNAGC	2 cut(s)	20, 2012
BmcAI	AGTACT	1 cut(s)	2068
Bme1390I	CCNGG	9 cut(s)	72, 140, 473, 872, 983, 1628, 1814, 2144, 2211
Bme18I	GGWCC	1 cut(s)	2131
BmgT120I	GGNCC	4 cut(s)	4, 137, 2131, 2140
BmiI	GGNNCC	4 cut(s)	76, 2117, 2142, 2355
BmrFI	CCNGG	9 cut(s)	72, 140, 473, 872, 983, 1628, 1814, 2144, 2211
BmsI	GCATC	6 cut(s)	625, 715, 1594, 1663, 2105, 2262
BmtI	GCTAGC	1 cut(s)	1802
BoxI	GACNNNNGTC	1 cut(s)	1383
BpiI	GAAGAC	4 cut(s)	693, 1758, 2047, 2258
BplI	GAGNNNNNCTC	2 cut(s)	2005, 2037
BpmI	CTGGAG	3 cut(s)	498, 560, 620
Bpu10I	CCTNAGC	2 cut(s)	1166, 1617
Bpu1102I	GCTNAGC	2 cut(s)	20, 2012
BpuEI	CTTGAG	3 cut(s)	29, 716, 1739
BpuMI	CCSGG	3 cut(s)	72, 140, 2144
BsaAI	YACGTR	1 cut(s)	2128
BsaBI	GATNNNNATC	1 cut(s)	198
BsaHI	GRCGYC	3 cut(s)	75, 233, 2116
BsaI	GGTCTC	1 cut(s)	2212
BsaJI	CCNNGG	9 cut(s)	471, 619, 870, 886, 981, 1813, 1890, 2142, 2210
BsaWI	WCCGGW	5 cut(s)	190, 260, 1061, 2221, 2356
BsaXI	ACNNNNNCTCC	2 cut(s)	49, 79
Bse118I	RCCGGY	3 cut(s)	158, 260, 2112
Bse1I	ACTGG	2 cut(s)	1411, 1793
Bse3DI	GCAATG	1 cut(s)	1439
Bse8I	GATNNNNATC	1 cut(s)	198
BseAI	TCCGGA	2 cut(s)	1061, 2356
BseBI	CCWGG	6 cut(s)	473, 872, 983, 1628, 1814, 2211
BseDI	CCNNGG	9 cut(s)	471, 619, 870, 886, 981, 1813, 1890, 2142, 2210
BseGI	GGATG	7 cut(s)	95, 117, 571, 681, 1108, 1601, 2090
BseJI	GATNNNNATC	1 cut(s)	198
BseMI	GCAATG	1 cut(s)	1439
BseMII	CTCAG	7 cut(s)	34, 450, 1157, 1281, 1635, 1988, 2003
BseNI	ACTGG	2 cut(s)	1411, 1793
BseSI	GKGCMC	1 cut(s)	806
BseX3I	CGGCCG	1 cut(s)	1925
BseXI	GCAGC	6 cut(s)	325, 607, 1316, 1652, 1663, 2133
BseYI	CCCAGC	2 cut(s)	709, 1309
BsgI	GTGCAG	1 cut(s)	614
Bsh1285I	CGRYCG	1 cut(s)	1928
BshFI	GGCC	8 cut(s)	5, 138, 507, 1889, 1895, 1927, 2141, 2203
BshNI	GGYRCC	2 cut(s)	74, 2115
BshTI	ACCGGT	1 cut(s)	260
BsiEI	CGRYCG	1 cut(s)	1928
BsiHKAI	GWGCWC	3 cut(s)	45, 806, 1205
BslFI	GGGAC	2 cut(s)	692, 1594
BsmAI	GTCTC	3 cut(s)	1836, 2006, 2212
BsmBI	CGTCTC	1 cut(s)	1836
BsmFI	GGGAC	2 cut(s)	692, 1594
BsnI	GGCC	8 cut(s)	5, 138, 507, 1889, 1895, 1927, 2141, 2203
Bso31I	GGTCTC	1 cut(s)	2212
Bsp1286I	GDGCHC	3 cut(s)	45, 806, 1205
Bsp13I	TCCGGA	2 cut(s)	1061, 2356
Bsp143I	GATC	8 cut(s)	436, 767, 854, 965, 1015, 1154, 1508, 2353
Bsp1720I	GCTNAGC	2 cut(s)	20, 2012
Bsp19I	CCATGG	1 cut(s)	886
BspANI	GGCC	8 cut(s)	5, 138, 507, 1889, 1895, 1927, 2141, 2203
BspCNI	CTCAG	7 cut(s)	33, 451, 1158, 1282, 1636, 1987, 2004
BspEI	TCCGGA	2 cut(s)	1061, 2356
BspLI	GGNNCC	4 cut(s)	76, 2117, 2142, 2355
BspOI	GCTAGC	1 cut(s)	1802
BspPI	GGATC	8 cut(s)	775, 862, 973, 1023, 1162, 1516, 2348, 2361
BspT107I	GGYRCC	2 cut(s)	74, 2115
BspTNI	GGTCTC	1 cut(s)	2212
BsrDI	GCAATG	1 cut(s)	1439
BsrFI	RCCGGY	3 cut(s)	158, 260, 2112
BsrI	ACTGG	2 cut(s)	1411, 1793
BssAI	RCCGGY	3 cut(s)	158, 260, 2112
BssECI	CCNNGG	9 cut(s)	471, 619, 870, 886, 981, 1813, 1890, 2142, 2210
BssMI	GATC	8 cut(s)	436, 767, 854, 965, 1015, 1154, 1508, 2353
BssNI	GRCGYC	3 cut(s)	75, 233, 2116
BssT1I	CCWWGG	2 cut(s)	886, 1890
Bst2UI	CCWGG	6 cut(s)	473, 872, 983, 1628, 1814, 2211
Bst4CI	ACNGT	6 cut(s)	151, 337, 1022, 1748, 2077, 2238
Bst6I	CTCTTC	4 cut(s)	1560, 1597, 2322, 2340
BstACI	GRCGYC	3 cut(s)	75, 233, 2116
BstAPI	GCANNNNNTGC	1 cut(s)	273
BstBAI	YACGTR	1 cut(s)	2128
BstC8I	GCNNGC	4 cut(s)	1302, 1446, 1800, 2114
BstDSI	CCRYGG	2 cut(s)	619, 886
BstENI	CCTNNNNNAGG	1 cut(s)	2208
BstF5I	GGATG	7 cut(s)	95, 117, 571, 681, 1108, 1601, 2090
BstH2I	RGCGCY	3 cut(s)	78, 1813, 2119
BstHHI	GCGC	3 cut(s)	77, 1812, 2118
BstKTI	GATC	8 cut(s)	439, 770, 857, 968, 1018, 1157, 1511, 2356
BstMAI	GTCTC	3 cut(s)	1836, 2006, 2212
BstMBI	GATC	8 cut(s)	436, 767, 854, 965, 1015, 1154, 1508, 2353
BstMCI	CGRYCG	1 cut(s)	1928
BstMWI	GCNNNNNNNGC	8 cut(s)	11, 40, 273, 1310, 1953, 2102, 2118, 2272
BstNI	CCWGG	6 cut(s)	473, 872, 983, 1628, 1814, 2211
BstPAI	GACNNNNGTC	1 cut(s)	1383
BstSCI	CCNGG	9 cut(s)	70, 138, 471, 870, 981, 1626, 1812, 2142, 2209
BstSLI	GKGCMC	1 cut(s)	806
BstV1I	GCAGC	6 cut(s)	325, 607, 1316, 1652, 1663, 2133
BstV2I	GAAGAC	4 cut(s)	693, 1758, 2047, 2258
BstX2I	RGATCY	3 cut(s)	854, 965, 2353
BstXI	CCANNNNNNTGG	1 cut(s)	2193
BstYI	RGATCY	3 cut(s)	854, 965, 2353
BstZI	CGGCCG	1 cut(s)	1925
BsuI	GTATCC	2 cut(s)	210, 541
BsuRI	GGCC	8 cut(s)	5, 138, 507, 1889, 1895, 1927, 2141, 2203
BtgI	CCRYGG	2 cut(s)	619, 886
BtsCI	GGATG	7 cut(s)	95, 117, 571, 681, 1108, 1601, 2090
BtsIMutI	CAGTG	4 cut(s)	1018, 1665, 1753, 1800
Cac8I	GCNNGC	4 cut(s)	1302, 1446, 1800, 2114
CfoI	GCGC	3 cut(s)	77, 1812, 2118
Cfr10I	RCCGGY	3 cut(s)	158, 260, 2112
Cfr13I	GGNCC	4 cut(s)	4, 137, 2131, 2140
CseI	GACGC	2 cut(s)	241, 1388
Csp6I	GTAC	1 cut(s)	2067
CspAI	ACCGGT	1 cut(s)	260
CviAII	CATG	4 cut(s)	560, 632, 887, 1910
CviQI	GTAC	1 cut(s)	2067
DinI	GGCGCC	2 cut(s)	76, 2117
DpnI	GATC	8 cut(s)	438, 769, 856, 967, 1017, 1156, 1510, 2355
DpnII	GATC	8 cut(s)	436, 767, 854, 965, 1015, 1154, 1508, 2353
EaeI	YGGCCR	2 cut(s)	505, 1925
EagI	CGGCCG	1 cut(s)	1925
Eam1104I	CTCTTC	4 cut(s)	1560, 1597, 2322, 2340
EarI	CTCTTC	4 cut(s)	1560, 1597, 2322, 2340
EciI	GGCGGA	1 cut(s)	2230
Ecl136II	GAGCTC	1 cut(s)	43
EclXI	CGGCCG	1 cut(s)	1925
Eco130I	CCWWGG	2 cut(s)	886, 1890
Eco147I	AGGCCT	1 cut(s)	2203
Eco24I	GRGCYC	1 cut(s)	45
Eco31I	GGTCTC	1 cut(s)	2212
Eco47I	GGWCC	1 cut(s)	2131
Eco52I	CGGCCG	1 cut(s)	1925
Eco53kI	GAGCTC	1 cut(s)	43
Eco57I	CTGAAG	3 cut(s)	687, 1618, 2037
Eco72I	CACGTG	1 cut(s)	2128
EcoICRI	GAGCTC	1 cut(s)	43
EcoNI	CCTNNNNNAGG	1 cut(s)	2208
EcoRII	CCWGG	6 cut(s)	471, 870, 981, 1626, 1812, 2209
EcoT14I	CCWWGG	2 cut(s)	886, 1890
EcoT22I	ATGCAT	1 cut(s)	1587
EcoT38I	GRGCYC	1 cut(s)	45
EgeI	GGCGCC	2 cut(s)	76, 2117
EheI	GGCGCC	2 cut(s)	76, 2117
ErhI	CCWWGG	2 cut(s)	886, 1890
Esp3I	CGTCTC	1 cut(s)	1836
FaeI	CATG	4 cut(s)	563, 635, 890, 1913
FaqI	GGGAC	2 cut(s)	692, 1594
FatI	CATG	4 cut(s)	559, 631, 886, 1909
FauI	CCCGC	1 cut(s)	2292
FauNDI	CATATG	1 cut(s)	1485
FbaI	TGATCA	1 cut(s)	436
FblI	GTMKAC	1 cut(s)	153
FokI	GGATG	7 cut(s)	82, 104, 558, 688, 1095, 1588, 2077
FriOI	GRGCYC	1 cut(s)	45
GlaI	GCGC	3 cut(s)	76, 1811, 2117
GsaI	CCCAGC	2 cut(s)	713, 1313
GsuI	CTGGAG	3 cut(s)	498, 560, 620
HaeII	RGCGCY	3 cut(s)	78, 1813, 2119
HaeIII	GGCC	8 cut(s)	5, 138, 507, 1889, 1895, 1927, 2141, 2203
HgaI	GACGC	2 cut(s)	241, 1388
HhaI	GCGC	3 cut(s)	77, 1812, 2118
Hin1I	GRCGYC	3 cut(s)	75, 233, 2116
Hin1II	CATG	4 cut(s)	563, 635, 890, 1913
Hin6I	GCGC	3 cut(s)	75, 1810, 2116
HinP1I	GCGC	3 cut(s)	75, 1810, 2116
HindIII	AAGCTT	2 cut(s)	429, 1415
HinfI	GANTC	9 cut(s)	130, 373, 563, 584, 698, 1114, 1323, 1721, 1727
HphI	GGTGA	4 cut(s)	49, 1535, 1888, 2052
Hpy166II	GTNNAC	2 cut(s)	154, 804
Hpy188I	TCNGA	7 cut(s)	29, 441, 772, 1113, 1291, 1726, 1977
Hpy8I	GTNNAC	2 cut(s)	154, 804
Hpy99I	CGWCG	3 cut(s)	235, 322, 1382
HpyAV	CCTTC	9 cut(s)	91, 137, 758, 942, 1003, 1272, 1622, 1812, 2061
HpyCH4III	ACNGT	6 cut(s)	151, 337, 1022, 1748, 2077, 2238
HpyCH4IV	ACGT	2 cut(s)	1044, 2127
HpyCH4V	TGCA	8 cut(s)	34, 595, 638, 804, 915, 1444, 1556, 1585
HpyF10VI	GCNNNNNNNGC	8 cut(s)	11, 40, 273, 1310, 1953, 2102, 2118, 2272
HpySE526I	ACGT	2 cut(s)	1044, 2127
Hsp92I	GRCGYC	3 cut(s)	75, 233, 2116
Hsp92II	CATG	4 cut(s)	563, 635, 890, 1913
HspAI	GCGC	3 cut(s)	75, 1810, 2116
KasI	GGCGCC	2 cut(s)	74, 2115
Kpn2I	TCCGGA	2 cut(s)	1061, 2356
KroI	GCCGGC	1 cut(s)	2112
KroNI	GCCGGC	1 cut(s)	2114
Ksp22I	TGATCA	1 cut(s)	436
Kzo9I	GATC	8 cut(s)	436, 767, 854, 965, 1015, 1154, 1508, 2353
LmnI	GCTCC	7 cut(s)	54, 305, 479, 831, 931, 942, 2332
Lsp1109I	GCAGC	6 cut(s)	325, 607, 1316, 1652, 1663, 2133
LweI	GCATC	6 cut(s)	625, 715, 1594, 1663, 2105, 2262
MaeII	ACGT	2 cut(s)	1044, 2127
MaeIII	GTNAC	9 cut(s)	220, 500, 649, 656, 846, 881, 992, 1243, 1831
MalI	GATC	8 cut(s)	438, 769, 856, 967, 1017, 1156, 1510, 2355
MboI	GATC	8 cut(s)	436, 767, 854, 965, 1015, 1154, 1508, 2353
MfeI	CAATTG	1 cut(s)	2187
MflI	RGATCY	3 cut(s)	854, 965, 2353
MhlI	GDGCHC	3 cut(s)	45, 806, 1205
MluCI	AATT	6 cut(s)	509, 640, 669, 1127, 1734, 2187
Mly113I	GGCGCC	2 cut(s)	75, 2116
MlyI	GAGTC	7 cut(s)	572, 593, 707, 1123, 1332, 1730, 1736
MmeI	TCCRAC	2 cut(s)	1722, 2015
Mph1103I	ATGCAT	1 cut(s)	1587
MreI	CGCCGGCG	1 cut(s)	2112
MroI	TCCGGA	2 cut(s)	1061, 2356
MroNI	GCCGGC	1 cut(s)	2112
MseI	TTAA	5 cut(s)	606, 626, 668, 1403, 1497
MslI	CAYNNNNRTG	1 cut(s)	1278
MspA1I	CMGCKG	2 cut(s)	598, 1643
MspR9I	CCNGG	9 cut(s)	72, 140, 473, 872, 983, 1628, 1814, 2144, 2211
MunI	CAATTG	1 cut(s)	2187
MvaI	CCWGG	6 cut(s)	473, 872, 983, 1628, 1814, 2211
MwoI	GCNNNNNNNGC	8 cut(s)	11, 40, 273, 1310, 1953, 2102, 2118, 2272
NaeI	GCCGGC	1 cut(s)	2114
NarI	GGCGCC	2 cut(s)	75, 2116
NciI	CCSGG	3 cut(s)	72, 140, 2144
NcoI	CCATGG	1 cut(s)	886
NdeI	CATATG	1 cut(s)	1485
NdeII	GATC	8 cut(s)	436, 767, 854, 965, 1015, 1154, 1508, 2353
NgoMIV	GCCGGC	1 cut(s)	2112
NheI	GCTAGC	1 cut(s)	1798
NlaIII	CATG	4 cut(s)	563, 635, 890, 1913
NlaIV	GGNNCC	4 cut(s)	76, 2117, 2142, 2355
NmuCI	GTSAC	7 cut(s)	220, 500, 656, 846, 881, 992, 1831
NsiI	ATGCAT	1 cut(s)	1587
PceI	AGGCCT	1 cut(s)	2203
PdiI	GCCGGC	1 cut(s)	2114
PfeI	GAWTC	2 cut(s)	130, 373
PflFI	GACNNNGTC	1 cut(s)	1322
PinAI	ACCGGT	1 cut(s)	260
PleI	GAGTC	7 cut(s)	571, 592, 706, 1122, 1331, 1729, 1735
PluTI	GGCGCC	2 cut(s)	78, 2119
PmaCI	CACGTG	1 cut(s)	2128
PmlI	CACGTG	1 cut(s)	2128
PpsI	GAGTC	7 cut(s)	571, 592, 706, 1122, 1331, 1729, 1735
Ppu21I	YACGTR	1 cut(s)	2128
PshAI	GACNNNNGTC	1 cut(s)	1383
Psp124BI	GAGCTC	1 cut(s)	45
Psp1406I	AACGTT	1 cut(s)	1044
Psp6I	CCWGG	6 cut(s)	471, 870, 981, 1626, 1812, 2209
PspCI	CACGTG	1 cut(s)	2128
PspFI	CCCAGC	2 cut(s)	709, 1309
PspGI	CCWGG	6 cut(s)	471, 870, 981, 1626, 1812, 2209
PspN4I	GGNNCC	4 cut(s)	76, 2117, 2142, 2355
PspPI	GGNCC	4 cut(s)	4, 137, 2131, 2140
PsrI	GAACNNNNNNTAC	2 cut(s)	1698, 1730
PsuI	RGATCY	3 cut(s)	854, 965, 2353
PsyI	GACNNNGTC	1 cut(s)	1322
PvuII	CAGCTG	2 cut(s)	598, 1643
RsaI	GTAC	1 cut(s)	2068
RsaNI	GTAC	1 cut(s)	2067
RseI	CAYNNNNRTG	1 cut(s)	1278
SacI	GAGCTC	1 cut(s)	45
SaqAI	TTAA	5 cut(s)	606, 626, 668, 1403, 1497
Sau3AI	GATC	8 cut(s)	436, 767, 854, 965, 1015, 1154, 1508, 2353
Sau96I	GGNCC	4 cut(s)	4, 137, 2131, 2140
ScaI	AGTACT	1 cut(s)	2068
SchI	GAGTC	7 cut(s)	572, 593, 707, 1123, 1332, 1730, 1736
ScrFI	CCNGG	9 cut(s)	72, 140, 473, 872, 983, 1628, 1814, 2144, 2211
SduI	GDGCHC	3 cut(s)	45, 806, 1205
SfaNI	GCATC	6 cut(s)	625, 715, 1594, 1663, 2105, 2262
SfoI	GGCGCC	2 cut(s)	76, 2117
SgrAI	CRCCGGYG	3 cut(s)	158, 260, 2112
SinI	GGWCC	1 cut(s)	2131
SmiMI	CAYNNNNRTG	1 cut(s)	1278
SmlI	CTYRAG	3 cut(s)	44, 695, 1718
SmoI	CTYRAG	3 cut(s)	44, 695, 1718
Sse9I	AATT	6 cut(s)	509, 640, 669, 1127, 1734, 2187
SseBI	AGGCCT	1 cut(s)	2203
SspDI	GGCGCC	2 cut(s)	74, 2115
SstI	GAGCTC	1 cut(s)	45
StuI	AGGCCT	1 cut(s)	2203
StyD4I	CCNGG	9 cut(s)	70, 138, 471, 870, 981, 1626, 1812, 2142, 2209
StyI	CCWWGG	2 cut(s)	886, 1890
TaaI	ACNGT	6 cut(s)	151, 337, 1022, 1748, 2077, 2238
TaiI	ACGT	2 cut(s)	1047, 2130
TaqI	TCGA	5 cut(s)	255, 332, 566, 1804, 2178
TaqII	GACCGA	1 cut(s)	438
TasI	AATT	6 cut(s)	509, 640, 669, 1127, 1734, 2187
TatI	WGTACW	1 cut(s)	2066
TauI	GCSGC	6 cut(s)	14, 1261, 1927, 2121, 2169, 2269
TfiI	GAWTC	2 cut(s)	130, 373
Tru1I	TTAA	5 cut(s)	606, 626, 668, 1403, 1497
Tru9I	TTAA	5 cut(s)	606, 626, 668, 1403, 1497
TscAI	CASTG	4 cut(s)	1025, 1672, 1753, 1800
TseFI	GTSAC	7 cut(s)	220, 500, 656, 846, 881, 992, 1831
TseI	GCWGC	6 cut(s)	313, 595, 1304, 1640, 1651, 2121
Tsp45I	GTSAC	7 cut(s)	220, 500, 656, 846, 881, 992, 1831
TspDTI	ATGAA	8 cut(s)	1014, 1097, 1185, 1248, 1889, 1898, 2079, 2264
TspGWI	ACGGA	3 cut(s)	192, 853, 2123
TspRI	CASTG	4 cut(s)	1025, 1672, 1753, 1800
Tth111I	GACNNNGTC	1 cut(s)	1322
VneI	GTGCAC	1 cut(s)	802
VpaK11BI	GGWCC	1 cut(s)	2131
XagI	CCTNNNNNAGG	1 cut(s)	2208
XapI	RAATTY	1 cut(s)	640
XcmI	CCANNNNNNNNNTGG	2 cut(s)	306, 1544
XmiI	GTMKAC	1 cut(s)	153
ZrmI	AGTACT	1 cut(s)	2068
Zsp2I	ATGCAT	1 cut(s)	1587

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.