Prupe.7G230900_v2.0.a1

Belongs to the ubiquitin-conjugating enzyme family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
20240110 .. 20242903
2794 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G230900.1

Sequence Viewer

Length: 1830 bp
ATGGCTCAAGCTGCGAGGCTCAACCTCCGATTGCAGAAGGAGCTCAAGCTCCTCCTCACCGACCCTCCTCCGGGTGCTTCTTTCCCTCTCCTCTCTTCCTCTTCATCCCTAACAACCATCGACGCCCAAATTAAAGGCCCAGAAGGAACTGTGTACGCCGAAGGTCTATTCAACATTAAGATTCAAATACCCGAGAGGTACCCGTTTCAGCCTCCAAGCGTGACCTTTGCTACGCCGATTTACCACCCGAATATCGACAACGGAGGCCGAATTTGCCTCGACATTCTCAATCTTCCTCCGAAGGTGAGTGAATTTTTCGATGTCCCCGAAAAAAGTGCTAATGGCAAATGCGGGTTAAGCGAGGTAGCCAAGGGCATTATAAACGGCCCCTTTGCACTTGAGGGGGCGTGGCAACCGTCATTGAACATTTCAACTGTGCTTACAAGCATTGGATTGTTATTGAGTGAGCCCAATCCTGATGATGGCCTGATGTGTGAAGCGAGTAGGGAGTTTAAATACAACAGACAAGCTTTTGACCAGAAAGCTCGATCTATGACTCAGAAATATGCTACTGGGAATGTTTGTGACACTCAATTTCACAGCAATGCAAATCCAATCACAGTGCAGCTGGAGGTTGAAACAACAAAGCTTGAGCCAAAACATGAAGCAGATGAGTTTGTTGTAAGTGATAAGAAGGTAATTGGGGGTAGCAGGAAGTTGTCATTGGAGGCTTCAGGCCGAACCAAGAAAAGGGATGCTAATGAGGAAGGGAATCAAGTCCCTAAGGACCAGCCCTTTCTCTCTGATTTTGGAAACCAGATAGAAGAAGAAGGAACAGAAAAGGCGGTGAAAGATACCCTTGATAAATGCAATCAAAGTCAGGAGAAGAAGCTATGTGGGAGCAGAAGGAAGTTATCATTAGAATCCCTCGGCCAATTCCAGAAGAAAAGTGATAATGATATGGAGAATGTGGTGCCAAATAATCATTGTTCATCACTCAAACCAGAAAGCCTTCCTGTGCCCTCTTCAGGATCATTGGTGCCACAATCTGGAAACAGTCACAACCAAGGGTTTCATCAGAGTCAAGAAAGTAAATTGGCTGATGACAACATAGGCATGAGATCAAAGAGGGTGCCTAAGTTTGGCAACAATCTGTCATTGGGTTCTTTGAACACATCCAAAATGATTGACGAAAACATCGTTATCCCTCAACTGTCTCCTTCTCAGTCCCATTGCAATGCTTTGTCTGAGCCCTTGCTAATGGCGCCAGCCCTTGGCAGTGTCACCAAATTGCAACCACATAAAGATTTGGTTGATGGAATTGGAAATGGCTCCATTGGTACAAGTTGCAAGAAGCTTTGTTTAGCTGGCAAGAAGCTTTCGCTGGGGTTTAGAGGCTCATCAGAGTCACATGGAAAGGTTGACAAGGAGAATGTGGCCCCACAGGTGACTGAGAATTCTGATGCAGTATCAAAGAATGGGGGTATAAATGCGAGTTATATAAAATGTGGGATGGATCAATCGGAAGAGAAGAATAGTAGAAACATGCTTCCACAGTCCCAGAAGAGTGTCTCTTCGTATCCATCCAAGTCCGTTCCGAAGCAAGAACAAAACTTGAGGTGGGATGAGAAGCAGCAATCTAAACAGGGTTACAATTGCGAAATTACCAAAGTGATTAAGCAAAAGGAATCAGAAGGACCAGCAATATCCGAGTCTGAGGCAGTAATTGTGTTGGATAGTGAAAGTAGTGATGAGGAAAGGCGAATAACTCCGAGGTCTAAATCACTGCTAGCAAGAAAGCGCATGGGAAAGTGGAGAATAAGAAGCTGA

Protein Analysis

610

Amino Acids

66.62

Weight (kDa)

8.28

Isoelectric Point (pI)

54.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 380
Acc65I GGTACC 1 cut(s) 198
AccB1I GGYRCC 5 cut(s) 198, 973, 1039, 1132, 1264
AccB7I CCANNNNNTGG 2 cut(s) 1049, 1274
AciI CCGC 2 cut(s) 351, 845
AclWI GGATC 2 cut(s) 1039, 1524
AcoI YGGCCR 1 cut(s) 931
AcsI RAATTY 3 cut(s) 270, 311, 1456
AcuI CTGAAG 2 cut(s) 717, 1011
AcyI GRCGYC 2 cut(s) 123, 1265
AfaI GTAC 3 cut(s) 155, 200, 1342
AfiI CCNNNNNNNGG 8 cut(s) 70, 71, 482, 750, 1028, 1049, 1142, 1274
AgsI TTSAA 6 cut(s) 172, 185, 424, 432, 638, 1171
AjuI GAANNNNNNNTTGG 2 cut(s) 707, 739
Alw21I GWGCWC 1 cut(s) 45
Alw26I GTCTC 2 cut(s) 1221, 1576
AlwI GGATC 2 cut(s) 1039, 1524
Ama87I CYCGRG 1 cut(s) 191
AoxI GGCC 7 cut(s) 136, 265, 385, 484, 736, 931, 1437
ApeKI GCWGC 3 cut(s) 11, 625, 1633
ApoI RAATTY 3 cut(s) 270, 311, 1456
Asp700I GAANNNNTTC 1 cut(s) 1011
Asp718I GGTACC 1 cut(s) 198
AspLEI GCGC 2 cut(s) 1267, 1803
AspS9I GGNCC 5 cut(s) 137, 386, 787, 1438, 1697
AsuC2I CCSGG 1 cut(s) 72
AsuHPI GGTGA 5 cut(s) 49, 316, 859, 1276, 1459
AsuNHI GCTAGC 1 cut(s) 1789
AvaI CYCGRG 1 cut(s) 191
AvaII GGWCC 2 cut(s) 787, 1697
AxyI CCTNAGG 1 cut(s) 783
BaeGI GKGCMC 1 cut(s) 1023
BanI GGYRCC 5 cut(s) 198, 973, 1039, 1132, 1264
BanII GRGCYC 3 cut(s) 45, 471, 1254
Bbv12I GWGCWC 1 cut(s) 45
BbvI GCAGC 2 cut(s) 637, 1645
BccI CCATC 5 cut(s) 125, 476, 1310, 1507, 1591
BceAI ACGGC 1 cut(s) 400
BcgI CGANNNNNNTGC 2 cut(s) 317, 351
BciVI GTATCC 1 cut(s) 1590
BcnI CCSGG 1 cut(s) 72
BcoDI GTCTC 2 cut(s) 1221, 1576
BfaI CTAG 1 cut(s) 1790
BfoI RGCGCY 1 cut(s) 1268
BfuI GTATCC 1 cut(s) 1590
BisI GCNGC 3 cut(s) 12, 626, 1634
BlsI GCNGC 3 cut(s) 13, 627, 1635
Bme1390I CCNGG 1 cut(s) 72
Bme18I GGWCC 2 cut(s) 787, 1697
BmeT110I CYCGRG 1 cut(s) 191
BmgT120I GGNCC 5 cut(s) 137, 386, 787, 1438, 1697
BmiI GGNNCC 8 cut(s) 200, 388, 975, 1041, 1134, 1266, 1333, 1440
BmrFI CCNGG 1 cut(s) 72
BmrI ACTGGG 1 cut(s) 582
BmsI GCATC 2 cut(s) 745, 1453
BmtI GCTAGC 1 cut(s) 1793
BmuI ACTGGG 1 cut(s) 582
BpmI CTGGAG 1 cut(s) 650
BpuEI CTTGAG 4 cut(s) 29, 419, 671, 1636
BpuMI CCSGG 1 cut(s) 72
BsaHI GRCGYC 2 cut(s) 123, 1265
BsaJI CCNNGG 5 cut(s) 369, 928, 1066, 1273, 1772
BsaXI ACNNNNNCTCC 2 cut(s) 49, 79
Bsc4I CCNNNNNNNGG 8 cut(s) 70, 71, 482, 750, 1028, 1049, 1142, 1274
Bse1I ACTGG 1 cut(s) 577
Bse21I CCTNAGG 1 cut(s) 783
Bse3DI GCAATG 3 cut(s) 610, 1231, 1243
BseDI CCNNGG 5 cut(s) 369, 928, 1066, 1273, 1772
BseGI GGATG 6 cut(s) 104, 760, 1175, 1518, 1583, 1630
BseLI CCNNNNNNNGG 8 cut(s) 70, 71, 482, 750, 1028, 1049, 1142, 1274
BseMI GCAATG 3 cut(s) 610, 1231, 1243
BseMII CTCAG 5 cut(s) 572, 1238, 1239, 1443, 1707
BseNI ACTGG 1 cut(s) 577
BseRI GAGGAG 4 cut(s) 41, 44, 57, 80
BseSI GKGCMC 1 cut(s) 1023
BseXI GCAGC 2 cut(s) 637, 1645
BseYI CCCAGC 1 cut(s) 1384
BsgI GTGCAG 1 cut(s) 644
BshFI GGCC 7 cut(s) 138, 267, 387, 486, 738, 933, 1439
BshNI GGYRCC 5 cut(s) 198, 973, 1039, 1132, 1264
BsiHKAI GWGCWC 1 cut(s) 45
BsiHKCI CYCGRG 1 cut(s) 191
BsiSI CCGG 1 cut(s) 71
BslFI GGGAC 4 cut(s) 308, 764, 1213, 1543
BslI CCNNNNNNNGG 8 cut(s) 70, 71, 482, 750, 1028, 1049, 1142, 1274
BsmAI GTCTC 2 cut(s) 1221, 1576
BsmFI GGGAC 4 cut(s) 308, 764, 1213, 1543
BsnI GGCC 7 cut(s) 138, 267, 387, 486, 738, 933, 1439
BsoBI CYCGRG 1 cut(s) 191
Bsp1286I GDGCHC 4 cut(s) 45, 471, 1023, 1254
Bsp143I GATC 4 cut(s) 548, 1031, 1121, 1516
BspACI CCGC 2 cut(s) 351, 845
BspANI GGCC 7 cut(s) 138, 267, 387, 486, 738, 933, 1439
BspCNI CTCAG 5 cut(s) 571, 1237, 1240, 1444, 1708
BspLI GGNNCC 8 cut(s) 200, 388, 975, 1041, 1134, 1266, 1333, 1440
BspOI GCTAGC 1 cut(s) 1793
BspPI GGATC 2 cut(s) 1039, 1524
BspT107I GGYRCC 5 cut(s) 198, 973, 1039, 1132, 1264
BsrDI GCAATG 3 cut(s) 610, 1231, 1243
BsrI ACTGG 1 cut(s) 577
BssECI CCNNGG 5 cut(s) 369, 928, 1066, 1273, 1772
BssMI GATC 4 cut(s) 548, 1031, 1121, 1516
BssNI GRCGYC 2 cut(s) 123, 1265
BssT1I CCWWGG 3 cut(s) 369, 1066, 1273
Bst4CI ACNGT 7 cut(s) 151, 417, 436, 622, 1058, 1215, 1557
Bst6I CTCTTC 6 cut(s) 100, 106, 1030, 1521, 1559, 1579
BstACI GRCGYC 2 cut(s) 123, 1265
BstC8I GCNNGC 3 cut(s) 1269, 1369, 1791
BstDEI CTNAG 7 cut(s) 558, 783, 1137, 1224, 1248, 1452, 1716
BstF5I GGATG 6 cut(s) 104, 760, 1175, 1518, 1583, 1630
BstH2I RGCGCY 1 cut(s) 1268
BstHHI GCGC 2 cut(s) 1267, 1803
BstKTI GATC 4 cut(s) 551, 1034, 1124, 1519
BstMAI GTCTC 2 cut(s) 1221, 1576
BstMBI GATC 4 cut(s) 548, 1031, 1121, 1516
BstMWI GCNNNNNNNGC 5 cut(s) 11, 40, 273, 357, 1264
BstNSI RCATGY 1 cut(s) 1549
BstSCI CCNGG 1 cut(s) 70
BstSLI GKGCMC 1 cut(s) 1023
BstV1I GCAGC 2 cut(s) 637, 1645
Bsu36I CCTNAGG 1 cut(s) 783
BsuI GTATCC 1 cut(s) 1590
BsuRI GGCC 7 cut(s) 138, 267, 387, 486, 738, 933, 1439
BtsCI GGATG 6 cut(s) 104, 760, 1175, 1518, 1583, 1630
BtsI GCAGTG 2 cut(s) 1285, 1784
BtsIMutI CAGTG 3 cut(s) 627, 1285, 1784
Cac8I GCNNGC 3 cut(s) 1269, 1369, 1791
CfoI GCGC 2 cut(s) 1267, 1803
Cfr13I GGNCC 5 cut(s) 137, 386, 787, 1438, 1697
CseI GACGC 1 cut(s) 131
Csp6I GTAC 3 cut(s) 154, 199, 1341
CviAII CATG 5 cut(s) 662, 1117, 1412, 1546, 1804
CviQI GTAC 3 cut(s) 154, 199, 1341
DdeI CTNAG 7 cut(s) 558, 783, 1137, 1224, 1248, 1452, 1716
DinI GGCGCC 1 cut(s) 1266
DpnI GATC 4 cut(s) 550, 1033, 1123, 1518
DpnII GATC 4 cut(s) 548, 1031, 1121, 1516
DraI TTTAAA 1 cut(s) 514
EaeI YGGCCR 1 cut(s) 931
Eam1104I CTCTTC 6 cut(s) 100, 106, 1030, 1521, 1559, 1579
EarI CTCTTC 6 cut(s) 100, 106, 1030, 1521, 1559, 1579
Ecl136II GAGCTC 1 cut(s) 43
Eco130I CCWWGG 3 cut(s) 369, 1066, 1273
Eco24I GRGCYC 3 cut(s) 45, 471, 1254
Eco47I GGWCC 2 cut(s) 787, 1697
Eco53kI GAGCTC 1 cut(s) 43
Eco57I CTGAAG 2 cut(s) 717, 1011
Eco81I CCTNAGG 1 cut(s) 783
Eco88I CYCGRG 1 cut(s) 191
EcoICRI GAGCTC 1 cut(s) 43
EcoRI GAATTC 1 cut(s) 1456
EcoT14I CCWWGG 3 cut(s) 369, 1066, 1273
EcoT38I GRGCYC 3 cut(s) 45, 471, 1254
EgeI GGCGCC 1 cut(s) 1266
EheI GGCGCC 1 cut(s) 1266
ErhI CCWWGG 3 cut(s) 369, 1066, 1273
FaeI CATG 5 cut(s) 665, 1120, 1415, 1549, 1807
FalI AAGNNNNNCTT 2 cut(s) 843, 875
FaqI GGGAC 4 cut(s) 308, 764, 1213, 1543
FatI CATG 5 cut(s) 661, 1116, 1411, 1545, 1803
FauI CCCGC 1 cut(s) 344
Fnu4HI GCNGC 3 cut(s) 12, 626, 1634
FokI GGATG 6 cut(s) 91, 767, 1162, 1525, 1570, 1637
FriOI GRGCYC 3 cut(s) 45, 471, 1254
Fsp4HI GCNGC 3 cut(s) 12, 626, 1634
FspBI CTAG 1 cut(s) 1790
GlaI GCGC 2 cut(s) 1266, 1802
GluI GCNGC 3 cut(s) 12, 626, 1634
GsaI CCCAGC 1 cut(s) 1388
GsuI CTGGAG 1 cut(s) 650
HaeII RGCGCY 1 cut(s) 1268
HaeIII GGCC 7 cut(s) 138, 267, 387, 486, 738, 933, 1439
HapII CCGG 1 cut(s) 71
HgaI GACGC 1 cut(s) 131
HhaI GCGC 2 cut(s) 1267, 1803
Hin1I GRCGYC 2 cut(s) 123, 1265
Hin1II CATG 5 cut(s) 665, 1120, 1415, 1549, 1807
Hin6I GCGC 2 cut(s) 1265, 1801
HinP1I GCGC 2 cut(s) 1265, 1801
HincII GTYRAC 1 cut(s) 1423
HindII GTYRAC 1 cut(s) 1423
HindIII AAGCTT 4 cut(s) 528, 647, 1355, 1376
HinfI GANTC 8 cut(s) 181, 556, 772, 923, 1081, 1406, 1688, 1712
HpaII CCGG 1 cut(s) 71
HphI GGTGA 5 cut(s) 49, 316, 859, 1276, 1459
Hpy166II GTNNAC 2 cut(s) 154, 1423
Hpy188III TCNNGA 6 cut(s) 476, 881, 940, 1029, 1050, 1085
Hpy8I GTNNAC 2 cut(s) 154, 1423
Hpy99I CGWCG 1 cut(s) 125
HpyCH4III ACNGT 7 cut(s) 151, 417, 436, 622, 1058, 1215, 1557
HpyCH4V TGCA 9 cut(s) 34, 395, 608, 625, 870, 1236, 1294, 1350, 1466
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 40, 273, 357, 1264
HpyF3I CTNAG 7 cut(s) 558, 783, 1137, 1224, 1248, 1452, 1716
Hsp92I GRCGYC 2 cut(s) 123, 1265
Hsp92II CATG 5 cut(s) 665, 1120, 1415, 1549, 1807
HspAI GCGC 2 cut(s) 1265, 1801
KasI GGCGCC 1 cut(s) 1264
KpnI GGTACC 1 cut(s) 202
Kzo9I GATC 4 cut(s) 548, 1031, 1121, 1516
LmnI GCTCC 4 cut(s) 40, 54, 900, 1337
Lsp1109I GCAGC 2 cut(s) 637, 1645
LweI GCATC 2 cut(s) 745, 1453
MaeI CTAG 1 cut(s) 1790
MaeIII GTNAC 7 cut(s) 220, 584, 1058, 1282, 1407, 1447, 1649
MalI GATC 4 cut(s) 550, 1033, 1123, 1518
MboI GATC 4 cut(s) 548, 1031, 1121, 1516
MfeI CAATTG 1 cut(s) 1654
MhlI GDGCHC 4 cut(s) 45, 471, 1023, 1254
Mly113I GGCGCC 1 cut(s) 1265
MlyI GAGTC 4 cut(s) 550, 1090, 1415, 1721
MmeI TCCRAC 1 cut(s) 1713
MroXI GAANNNNTTC 1 cut(s) 1011
MseI TTAA 5 cut(s) 132, 177, 356, 513, 1677
MslI CAYNNNNRTG 3 cut(s) 603, 1115, 1236
MspA1I CMGCKG 1 cut(s) 628
MspI CCGG 1 cut(s) 71
MspR9I CCNGG 1 cut(s) 72
MunI CAATTG 1 cut(s) 1654
MwoI GCNNNNNNNGC 5 cut(s) 11, 40, 273, 357, 1264
NarI GGCGCC 1 cut(s) 1265
NciI CCSGG 1 cut(s) 72
NdeII GATC 4 cut(s) 548, 1031, 1121, 1516
NheI GCTAGC 1 cut(s) 1789
NlaIII CATG 5 cut(s) 665, 1120, 1415, 1549, 1807
NlaIV GGNNCC 8 cut(s) 200, 388, 975, 1041, 1134, 1266, 1333, 1440
NmeAIII GCCGAG 1 cut(s) 909
NmuCI GTSAC 6 cut(s) 220, 584, 1058, 1282, 1407, 1447
NspI RCATGY 1 cut(s) 1549
PcsI WCGNNNNNNNCGW 2 cut(s) 324, 1197
PdmI GAANNNNTTC 1 cut(s) 1011
PfeI GAWTC 4 cut(s) 181, 772, 923, 1688
PflMI CCANNNNNTGG 2 cut(s) 1049, 1274
PkrI GCNGC 3 cut(s) 13, 627, 1635
PleI GAGTC 4 cut(s) 550, 1089, 1414, 1720
PluTI GGCGCC 1 cut(s) 1268
PpsI GAGTC 4 cut(s) 550, 1089, 1414, 1720
PsiI TTATAA 1 cut(s) 380
Psp124BI GAGCTC 1 cut(s) 45
PspFI CCCAGC 1 cut(s) 1384
PspN4I GGNNCC 8 cut(s) 200, 388, 975, 1041, 1134, 1266, 1333, 1440
PspPI GGNCC 5 cut(s) 137, 386, 787, 1438, 1697
PvuII CAGCTG 1 cut(s) 628
RsaI GTAC 3 cut(s) 155, 200, 1342
RsaNI GTAC 3 cut(s) 154, 199, 1341
RseI CAYNNNNRTG 3 cut(s) 603, 1115, 1236
SacI GAGCTC 1 cut(s) 45
SaqAI TTAA 5 cut(s) 132, 177, 356, 513, 1677
SatI GCNGC 3 cut(s) 12, 626, 1634
Sau3AI GATC 4 cut(s) 548, 1031, 1121, 1516
Sau96I GGNCC 5 cut(s) 137, 386, 787, 1438, 1697
SchI GAGTC 4 cut(s) 550, 1090, 1415, 1721
ScrFI CCNGG 1 cut(s) 72
SduI GDGCHC 4 cut(s) 45, 471, 1023, 1254
SfaNI GCATC 2 cut(s) 745, 1453
SfoI GGCGCC 1 cut(s) 1266
SinI GGWCC 2 cut(s) 787, 1697
SmiMI CAYNNNNRTG 3 cut(s) 603, 1115, 1236
SmlI CTYRAG 5 cut(s) 6, 44, 398, 650, 1615
SmoI CTYRAG 5 cut(s) 6, 44, 398, 650, 1615
SsiI CCGC 2 cut(s) 351, 845
SspDI GGCGCC 1 cut(s) 1264
SspMI CTAG 1 cut(s) 1790
SstI GAGCTC 1 cut(s) 45
StyD4I CCNGG 1 cut(s) 70
StyI CCWWGG 3 cut(s) 369, 1066, 1273
TaaI ACNGT 7 cut(s) 151, 417, 436, 622, 1058, 1215, 1557
TaqI TCGA 5 cut(s) 120, 255, 279, 318, 547
TfiI GAWTC 4 cut(s) 181, 772, 923, 1688
Tru1I TTAA 5 cut(s) 132, 177, 356, 513, 1677
Tru9I TTAA 5 cut(s) 132, 177, 356, 513, 1677
TscAI CASTG 3 cut(s) 627, 1285, 1791
TseFI GTSAC 6 cut(s) 220, 584, 1058, 1282, 1407, 1447
TseI GCWGC 3 cut(s) 11, 625, 1633
Tsp45I GTSAC 6 cut(s) 220, 584, 1058, 1282, 1407, 1447
TspDTI ATGAA 4 cut(s) 93, 678, 981, 1064
TspGWI ACGGA 2 cut(s) 276, 1582
TspRI CASTG 3 cut(s) 627, 1285, 1791
Van91I CCANNNNNTGG 2 cut(s) 1049, 1274
VpaK11BI GGWCC 2 cut(s) 787, 1697
XapI RAATTY 3 cut(s) 270, 311, 1456
XceI RCATGY 1 cut(s) 1549
XmnI GAANNNNTTC 1 cut(s) 1011
XspI CTAG 1 cut(s) 1790
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.