Belongs to the ubiquitin-conjugating enzyme family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G24515 AT3G24515 AT3G24515 AT3G24515 |
| fragaria_vesca | FvH4_1g04830 FvH4_1g04830 FvH4_4g32890 |
| malus_domestica | MD08G1128600.v1.1 MD14G1109900.v1.1 MD15G1186000.v1.1 |
| prunus_persica | Prupe.7G230900_v2.0.a1 |
| pyrus_communis | pycom15g16670 |
| rosa_chinensis | RchiOBHm_Chr2g0090471 |
| rosa_laevigata | RLG00000016116 |
| rosa_multiflora | Rmu_sc0004514.1_g000022 Rmu_sc0014034.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00151110 |
| rosa_rugosa | Rorug02G0008200 Rorug02G0008300 |
| rosa_samantha | Rh2AG053700 Rh2BG053200 Rh2CG055300 Rh2DG053900 |
| rosa_wichuraiana | Rw2G004330 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 380 |
| Acc65I | GGTACC | 1 cut(s) | 198 |
| AccB1I | GGYRCC | 5 cut(s) | 198, 973, 1039, 1132, 1264 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1049, 1274 |
| AciI | CCGC | 2 cut(s) | 351, 845 |
| AclWI | GGATC | 2 cut(s) | 1039, 1524 |
| AcoI | YGGCCR | 1 cut(s) | 931 |
| AcsI | RAATTY | 3 cut(s) | 270, 311, 1456 |
| AcuI | CTGAAG | 2 cut(s) | 717, 1011 |
| AcyI | GRCGYC | 2 cut(s) | 123, 1265 |
| AfaI | GTAC | 3 cut(s) | 155, 200, 1342 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 70, 71, 482, 750, 1028, 1049, 1142, 1274 |
| AgsI | TTSAA | 6 cut(s) | 172, 185, 424, 432, 638, 1171 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 707, 739 |
| Alw21I | GWGCWC | 1 cut(s) | 45 |
| Alw26I | GTCTC | 2 cut(s) | 1221, 1576 |
| AlwI | GGATC | 2 cut(s) | 1039, 1524 |
| Ama87I | CYCGRG | 1 cut(s) | 191 |
| AoxI | GGCC | 7 cut(s) | 136, 265, 385, 484, 736, 931, 1437 |
| ApeKI | GCWGC | 3 cut(s) | 11, 625, 1633 |
| ApoI | RAATTY | 3 cut(s) | 270, 311, 1456 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1011 |
| Asp718I | GGTACC | 1 cut(s) | 198 |
| AspLEI | GCGC | 2 cut(s) | 1267, 1803 |
| AspS9I | GGNCC | 5 cut(s) | 137, 386, 787, 1438, 1697 |
| AsuC2I | CCSGG | 1 cut(s) | 72 |
| AsuHPI | GGTGA | 5 cut(s) | 49, 316, 859, 1276, 1459 |
| AsuNHI | GCTAGC | 1 cut(s) | 1789 |
| AvaI | CYCGRG | 1 cut(s) | 191 |
| AvaII | GGWCC | 2 cut(s) | 787, 1697 |
| AxyI | CCTNAGG | 1 cut(s) | 783 |
| BaeGI | GKGCMC | 1 cut(s) | 1023 |
| BanI | GGYRCC | 5 cut(s) | 198, 973, 1039, 1132, 1264 |
| BanII | GRGCYC | 3 cut(s) | 45, 471, 1254 |
| Bbv12I | GWGCWC | 1 cut(s) | 45 |
| BbvI | GCAGC | 2 cut(s) | 637, 1645 |
| BccI | CCATC | 5 cut(s) | 125, 476, 1310, 1507, 1591 |
| BceAI | ACGGC | 1 cut(s) | 400 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 317, 351 |
| BciVI | GTATCC | 1 cut(s) | 1590 |
| BcnI | CCSGG | 1 cut(s) | 72 |
| BcoDI | GTCTC | 2 cut(s) | 1221, 1576 |
| BfaI | CTAG | 1 cut(s) | 1790 |
| BfoI | RGCGCY | 1 cut(s) | 1268 |
| BfuI | GTATCC | 1 cut(s) | 1590 |
| BisI | GCNGC | 3 cut(s) | 12, 626, 1634 |
| BlsI | GCNGC | 3 cut(s) | 13, 627, 1635 |
| Bme1390I | CCNGG | 1 cut(s) | 72 |
| Bme18I | GGWCC | 2 cut(s) | 787, 1697 |
| BmeT110I | CYCGRG | 1 cut(s) | 191 |
| BmgT120I | GGNCC | 5 cut(s) | 137, 386, 787, 1438, 1697 |
| BmiI | GGNNCC | 8 cut(s) | 200, 388, 975, 1041, 1134, 1266, 1333, 1440 |
| BmrFI | CCNGG | 1 cut(s) | 72 |
| BmrI | ACTGGG | 1 cut(s) | 582 |
| BmsI | GCATC | 2 cut(s) | 745, 1453 |
| BmtI | GCTAGC | 1 cut(s) | 1793 |
| BmuI | ACTGGG | 1 cut(s) | 582 |
| BpmI | CTGGAG | 1 cut(s) | 650 |
| BpuEI | CTTGAG | 4 cut(s) | 29, 419, 671, 1636 |
| BpuMI | CCSGG | 1 cut(s) | 72 |
| BsaHI | GRCGYC | 2 cut(s) | 123, 1265 |
| BsaJI | CCNNGG | 5 cut(s) | 369, 928, 1066, 1273, 1772 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 49, 79 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 70, 71, 482, 750, 1028, 1049, 1142, 1274 |
| Bse1I | ACTGG | 1 cut(s) | 577 |
| Bse21I | CCTNAGG | 1 cut(s) | 783 |
| Bse3DI | GCAATG | 3 cut(s) | 610, 1231, 1243 |
| BseDI | CCNNGG | 5 cut(s) | 369, 928, 1066, 1273, 1772 |
| BseGI | GGATG | 6 cut(s) | 104, 760, 1175, 1518, 1583, 1630 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 70, 71, 482, 750, 1028, 1049, 1142, 1274 |
| BseMI | GCAATG | 3 cut(s) | 610, 1231, 1243 |
| BseMII | CTCAG | 5 cut(s) | 572, 1238, 1239, 1443, 1707 |
| BseNI | ACTGG | 1 cut(s) | 577 |
| BseRI | GAGGAG | 4 cut(s) | 41, 44, 57, 80 |
| BseSI | GKGCMC | 1 cut(s) | 1023 |
| BseXI | GCAGC | 2 cut(s) | 637, 1645 |
| BseYI | CCCAGC | 1 cut(s) | 1384 |
| BsgI | GTGCAG | 1 cut(s) | 644 |
| BshFI | GGCC | 7 cut(s) | 138, 267, 387, 486, 738, 933, 1439 |
| BshNI | GGYRCC | 5 cut(s) | 198, 973, 1039, 1132, 1264 |
| BsiHKAI | GWGCWC | 1 cut(s) | 45 |
| BsiHKCI | CYCGRG | 1 cut(s) | 191 |
| BsiSI | CCGG | 1 cut(s) | 71 |
| BslFI | GGGAC | 4 cut(s) | 308, 764, 1213, 1543 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 70, 71, 482, 750, 1028, 1049, 1142, 1274 |
| BsmAI | GTCTC | 2 cut(s) | 1221, 1576 |
| BsmFI | GGGAC | 4 cut(s) | 308, 764, 1213, 1543 |
| BsnI | GGCC | 7 cut(s) | 138, 267, 387, 486, 738, 933, 1439 |
| BsoBI | CYCGRG | 1 cut(s) | 191 |
| Bsp1286I | GDGCHC | 4 cut(s) | 45, 471, 1023, 1254 |
| Bsp143I | GATC | 4 cut(s) | 548, 1031, 1121, 1516 |
| BspACI | CCGC | 2 cut(s) | 351, 845 |
| BspANI | GGCC | 7 cut(s) | 138, 267, 387, 486, 738, 933, 1439 |
| BspCNI | CTCAG | 5 cut(s) | 571, 1237, 1240, 1444, 1708 |
| BspLI | GGNNCC | 8 cut(s) | 200, 388, 975, 1041, 1134, 1266, 1333, 1440 |
| BspOI | GCTAGC | 1 cut(s) | 1793 |
| BspPI | GGATC | 2 cut(s) | 1039, 1524 |
| BspT107I | GGYRCC | 5 cut(s) | 198, 973, 1039, 1132, 1264 |
| BsrDI | GCAATG | 3 cut(s) | 610, 1231, 1243 |
| BsrI | ACTGG | 1 cut(s) | 577 |
| BssECI | CCNNGG | 5 cut(s) | 369, 928, 1066, 1273, 1772 |
| BssMI | GATC | 4 cut(s) | 548, 1031, 1121, 1516 |
| BssNI | GRCGYC | 2 cut(s) | 123, 1265 |
| BssT1I | CCWWGG | 3 cut(s) | 369, 1066, 1273 |
| Bst4CI | ACNGT | 7 cut(s) | 151, 417, 436, 622, 1058, 1215, 1557 |
| Bst6I | CTCTTC | 6 cut(s) | 100, 106, 1030, 1521, 1559, 1579 |
| BstACI | GRCGYC | 2 cut(s) | 123, 1265 |
| BstC8I | GCNNGC | 3 cut(s) | 1269, 1369, 1791 |
| BstDEI | CTNAG | 7 cut(s) | 558, 783, 1137, 1224, 1248, 1452, 1716 |
| BstF5I | GGATG | 6 cut(s) | 104, 760, 1175, 1518, 1583, 1630 |
| BstH2I | RGCGCY | 1 cut(s) | 1268 |
| BstHHI | GCGC | 2 cut(s) | 1267, 1803 |
| BstKTI | GATC | 4 cut(s) | 551, 1034, 1124, 1519 |
| BstMAI | GTCTC | 2 cut(s) | 1221, 1576 |
| BstMBI | GATC | 4 cut(s) | 548, 1031, 1121, 1516 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 11, 40, 273, 357, 1264 |
| BstNSI | RCATGY | 1 cut(s) | 1549 |
| BstSCI | CCNGG | 1 cut(s) | 70 |
| BstSLI | GKGCMC | 1 cut(s) | 1023 |
| BstV1I | GCAGC | 2 cut(s) | 637, 1645 |
| Bsu36I | CCTNAGG | 1 cut(s) | 783 |
| BsuI | GTATCC | 1 cut(s) | 1590 |
| BsuRI | GGCC | 7 cut(s) | 138, 267, 387, 486, 738, 933, 1439 |
| BtsCI | GGATG | 6 cut(s) | 104, 760, 1175, 1518, 1583, 1630 |
| BtsI | GCAGTG | 2 cut(s) | 1285, 1784 |
| BtsIMutI | CAGTG | 3 cut(s) | 627, 1285, 1784 |
| Cac8I | GCNNGC | 3 cut(s) | 1269, 1369, 1791 |
| CfoI | GCGC | 2 cut(s) | 1267, 1803 |
| Cfr13I | GGNCC | 5 cut(s) | 137, 386, 787, 1438, 1697 |
| CseI | GACGC | 1 cut(s) | 131 |
| Csp6I | GTAC | 3 cut(s) | 154, 199, 1341 |
| CviAII | CATG | 5 cut(s) | 662, 1117, 1412, 1546, 1804 |
| CviQI | GTAC | 3 cut(s) | 154, 199, 1341 |
| DdeI | CTNAG | 7 cut(s) | 558, 783, 1137, 1224, 1248, 1452, 1716 |
| DinI | GGCGCC | 1 cut(s) | 1266 |
| DpnI | GATC | 4 cut(s) | 550, 1033, 1123, 1518 |
| DpnII | GATC | 4 cut(s) | 548, 1031, 1121, 1516 |
| DraI | TTTAAA | 1 cut(s) | 514 |
| EaeI | YGGCCR | 1 cut(s) | 931 |
| Eam1104I | CTCTTC | 6 cut(s) | 100, 106, 1030, 1521, 1559, 1579 |
| EarI | CTCTTC | 6 cut(s) | 100, 106, 1030, 1521, 1559, 1579 |
| Ecl136II | GAGCTC | 1 cut(s) | 43 |
| Eco130I | CCWWGG | 3 cut(s) | 369, 1066, 1273 |
| Eco24I | GRGCYC | 3 cut(s) | 45, 471, 1254 |
| Eco47I | GGWCC | 2 cut(s) | 787, 1697 |
| Eco53kI | GAGCTC | 1 cut(s) | 43 |
| Eco57I | CTGAAG | 2 cut(s) | 717, 1011 |
| Eco81I | CCTNAGG | 1 cut(s) | 783 |
| Eco88I | CYCGRG | 1 cut(s) | 191 |
| EcoICRI | GAGCTC | 1 cut(s) | 43 |
| EcoRI | GAATTC | 1 cut(s) | 1456 |
| EcoT14I | CCWWGG | 3 cut(s) | 369, 1066, 1273 |
| EcoT38I | GRGCYC | 3 cut(s) | 45, 471, 1254 |
| EgeI | GGCGCC | 1 cut(s) | 1266 |
| EheI | GGCGCC | 1 cut(s) | 1266 |
| ErhI | CCWWGG | 3 cut(s) | 369, 1066, 1273 |
| FaeI | CATG | 5 cut(s) | 665, 1120, 1415, 1549, 1807 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 843, 875 |
| FaqI | GGGAC | 4 cut(s) | 308, 764, 1213, 1543 |
| FatI | CATG | 5 cut(s) | 661, 1116, 1411, 1545, 1803 |
| FauI | CCCGC | 1 cut(s) | 344 |
| Fnu4HI | GCNGC | 3 cut(s) | 12, 626, 1634 |
| FokI | GGATG | 6 cut(s) | 91, 767, 1162, 1525, 1570, 1637 |
| FriOI | GRGCYC | 3 cut(s) | 45, 471, 1254 |
| Fsp4HI | GCNGC | 3 cut(s) | 12, 626, 1634 |
| FspBI | CTAG | 1 cut(s) | 1790 |
| GlaI | GCGC | 2 cut(s) | 1266, 1802 |
| GluI | GCNGC | 3 cut(s) | 12, 626, 1634 |
| GsaI | CCCAGC | 1 cut(s) | 1388 |
| GsuI | CTGGAG | 1 cut(s) | 650 |
| HaeII | RGCGCY | 1 cut(s) | 1268 |
| HaeIII | GGCC | 7 cut(s) | 138, 267, 387, 486, 738, 933, 1439 |
| HapII | CCGG | 1 cut(s) | 71 |
| HgaI | GACGC | 1 cut(s) | 131 |
| HhaI | GCGC | 2 cut(s) | 1267, 1803 |
| Hin1I | GRCGYC | 2 cut(s) | 123, 1265 |
| Hin1II | CATG | 5 cut(s) | 665, 1120, 1415, 1549, 1807 |
| Hin6I | GCGC | 2 cut(s) | 1265, 1801 |
| HinP1I | GCGC | 2 cut(s) | 1265, 1801 |
| HincII | GTYRAC | 1 cut(s) | 1423 |
| HindII | GTYRAC | 1 cut(s) | 1423 |
| HindIII | AAGCTT | 4 cut(s) | 528, 647, 1355, 1376 |
| HinfI | GANTC | 8 cut(s) | 181, 556, 772, 923, 1081, 1406, 1688, 1712 |
| HpaII | CCGG | 1 cut(s) | 71 |
| HphI | GGTGA | 5 cut(s) | 49, 316, 859, 1276, 1459 |
| Hpy166II | GTNNAC | 2 cut(s) | 154, 1423 |
| Hpy188III | TCNNGA | 6 cut(s) | 476, 881, 940, 1029, 1050, 1085 |
| Hpy8I | GTNNAC | 2 cut(s) | 154, 1423 |
| Hpy99I | CGWCG | 1 cut(s) | 125 |
| HpyCH4III | ACNGT | 7 cut(s) | 151, 417, 436, 622, 1058, 1215, 1557 |
| HpyCH4V | TGCA | 9 cut(s) | 34, 395, 608, 625, 870, 1236, 1294, 1350, 1466 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 11, 40, 273, 357, 1264 |
| HpyF3I | CTNAG | 7 cut(s) | 558, 783, 1137, 1224, 1248, 1452, 1716 |
| Hsp92I | GRCGYC | 2 cut(s) | 123, 1265 |
| Hsp92II | CATG | 5 cut(s) | 665, 1120, 1415, 1549, 1807 |
| HspAI | GCGC | 2 cut(s) | 1265, 1801 |
| KasI | GGCGCC | 1 cut(s) | 1264 |
| KpnI | GGTACC | 1 cut(s) | 202 |
| Kzo9I | GATC | 4 cut(s) | 548, 1031, 1121, 1516 |
| LmnI | GCTCC | 4 cut(s) | 40, 54, 900, 1337 |
| Lsp1109I | GCAGC | 2 cut(s) | 637, 1645 |
| LweI | GCATC | 2 cut(s) | 745, 1453 |
| MaeI | CTAG | 1 cut(s) | 1790 |
| MaeIII | GTNAC | 7 cut(s) | 220, 584, 1058, 1282, 1407, 1447, 1649 |
| MalI | GATC | 4 cut(s) | 550, 1033, 1123, 1518 |
| MboI | GATC | 4 cut(s) | 548, 1031, 1121, 1516 |
| MfeI | CAATTG | 1 cut(s) | 1654 |
| MhlI | GDGCHC | 4 cut(s) | 45, 471, 1023, 1254 |
| Mly113I | GGCGCC | 1 cut(s) | 1265 |
| MlyI | GAGTC | 4 cut(s) | 550, 1090, 1415, 1721 |
| MmeI | TCCRAC | 1 cut(s) | 1713 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1011 |
| MseI | TTAA | 5 cut(s) | 132, 177, 356, 513, 1677 |
| MslI | CAYNNNNRTG | 3 cut(s) | 603, 1115, 1236 |
| MspA1I | CMGCKG | 1 cut(s) | 628 |
| MspI | CCGG | 1 cut(s) | 71 |
| MspR9I | CCNGG | 1 cut(s) | 72 |
| MunI | CAATTG | 1 cut(s) | 1654 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 11, 40, 273, 357, 1264 |
| NarI | GGCGCC | 1 cut(s) | 1265 |
| NciI | CCSGG | 1 cut(s) | 72 |
| NdeII | GATC | 4 cut(s) | 548, 1031, 1121, 1516 |
| NheI | GCTAGC | 1 cut(s) | 1789 |
| NlaIII | CATG | 5 cut(s) | 665, 1120, 1415, 1549, 1807 |
| NlaIV | GGNNCC | 8 cut(s) | 200, 388, 975, 1041, 1134, 1266, 1333, 1440 |
| NmeAIII | GCCGAG | 1 cut(s) | 909 |
| NmuCI | GTSAC | 6 cut(s) | 220, 584, 1058, 1282, 1407, 1447 |
| NspI | RCATGY | 1 cut(s) | 1549 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 324, 1197 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1011 |
| PfeI | GAWTC | 4 cut(s) | 181, 772, 923, 1688 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1049, 1274 |
| PkrI | GCNGC | 3 cut(s) | 13, 627, 1635 |
| PleI | GAGTC | 4 cut(s) | 550, 1089, 1414, 1720 |
| PluTI | GGCGCC | 1 cut(s) | 1268 |
| PpsI | GAGTC | 4 cut(s) | 550, 1089, 1414, 1720 |
| PsiI | TTATAA | 1 cut(s) | 380 |
| Psp124BI | GAGCTC | 1 cut(s) | 45 |
| PspFI | CCCAGC | 1 cut(s) | 1384 |
| PspN4I | GGNNCC | 8 cut(s) | 200, 388, 975, 1041, 1134, 1266, 1333, 1440 |
| PspPI | GGNCC | 5 cut(s) | 137, 386, 787, 1438, 1697 |
| PvuII | CAGCTG | 1 cut(s) | 628 |
| RsaI | GTAC | 3 cut(s) | 155, 200, 1342 |
| RsaNI | GTAC | 3 cut(s) | 154, 199, 1341 |
| RseI | CAYNNNNRTG | 3 cut(s) | 603, 1115, 1236 |
| SacI | GAGCTC | 1 cut(s) | 45 |
| SaqAI | TTAA | 5 cut(s) | 132, 177, 356, 513, 1677 |
| SatI | GCNGC | 3 cut(s) | 12, 626, 1634 |
| Sau3AI | GATC | 4 cut(s) | 548, 1031, 1121, 1516 |
| Sau96I | GGNCC | 5 cut(s) | 137, 386, 787, 1438, 1697 |
| SchI | GAGTC | 4 cut(s) | 550, 1090, 1415, 1721 |
| ScrFI | CCNGG | 1 cut(s) | 72 |
| SduI | GDGCHC | 4 cut(s) | 45, 471, 1023, 1254 |
| SfaNI | GCATC | 2 cut(s) | 745, 1453 |
| SfoI | GGCGCC | 1 cut(s) | 1266 |
| SinI | GGWCC | 2 cut(s) | 787, 1697 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 603, 1115, 1236 |
| SmlI | CTYRAG | 5 cut(s) | 6, 44, 398, 650, 1615 |
| SmoI | CTYRAG | 5 cut(s) | 6, 44, 398, 650, 1615 |
| SsiI | CCGC | 2 cut(s) | 351, 845 |
| SspDI | GGCGCC | 1 cut(s) | 1264 |
| SspMI | CTAG | 1 cut(s) | 1790 |
| SstI | GAGCTC | 1 cut(s) | 45 |
| StyD4I | CCNGG | 1 cut(s) | 70 |
| StyI | CCWWGG | 3 cut(s) | 369, 1066, 1273 |
| TaaI | ACNGT | 7 cut(s) | 151, 417, 436, 622, 1058, 1215, 1557 |
| TaqI | TCGA | 5 cut(s) | 120, 255, 279, 318, 547 |
| TfiI | GAWTC | 4 cut(s) | 181, 772, 923, 1688 |
| Tru1I | TTAA | 5 cut(s) | 132, 177, 356, 513, 1677 |
| Tru9I | TTAA | 5 cut(s) | 132, 177, 356, 513, 1677 |
| TscAI | CASTG | 3 cut(s) | 627, 1285, 1791 |
| TseFI | GTSAC | 6 cut(s) | 220, 584, 1058, 1282, 1407, 1447 |
| TseI | GCWGC | 3 cut(s) | 11, 625, 1633 |
| Tsp45I | GTSAC | 6 cut(s) | 220, 584, 1058, 1282, 1407, 1447 |
| TspDTI | ATGAA | 4 cut(s) | 93, 678, 981, 1064 |
| TspGWI | ACGGA | 2 cut(s) | 276, 1582 |
| TspRI | CASTG | 3 cut(s) | 627, 1285, 1791 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1049, 1274 |
| VpaK11BI | GGWCC | 2 cut(s) | 787, 1697 |
| XapI | RAATTY | 3 cut(s) | 270, 311, 1456 |
| XceI | RCATGY | 1 cut(s) | 1549 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1011 |
| XspI | CTAG | 1 cut(s) | 1790 |