FvH4_1g05840

Plant family of unknown function (DUF810)

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Forward (+)
3107209 .. 3111747
4539 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g05840.t2

Sequence Viewer

Length: 2928 bp
ATGGCTCAGATCATCAGAGACAGAGTCTTCGGCTCTTTCGGTGGTTCCAGACGACACAGCAAAATCCCCATTCCAATTCCACGACCCGAACCCGAACCCGGACCCGAACGAGTCATGCCCGTTTACCCGGTTGAAGACCTCCCCAACCCGTTTGGGGAATTGGGCCCGGACCTGTCGGACTCGGACCTCCGGGAAACCGTCTACGAGATCCTAGTCGGAGCATGCCGGAGCTCCGGCCCGAAACCGCTGACGTACACGCCGCAGTCGGAGAAGGCCGACCGGAGTTCGTTGTCGACGCTTCAGAGGTCGCTGACGTCATCGGCGAAGGCGGCTCTGGGGTTGAAGCAAACGGCGTCGTCTAAGAGACTCGGGAGTAGTAAACGGTCCGGGTCGGTTTTTGAGCTTATTCGGGTCCAGATGAGGGTTTCGGAGCAGACCGATACCCGAATCCGGAGAGCCCTTCTCAGAGTTGCTGCTGGTCAGCTGGGACGAAAGATAGAGTGCATGGTGTTGCCTCTGGAGCTCTTGCAGCATTTCAGGTCGTTAGATTTCGGCAATCAGCAAGAGTATGAAGCTTGGCAGAGGAGGAATTTGAAGGTTCTGGAAGTGGGACTTCTGGTGTATCCTCATATGCCTTTGGATAGGAAAGAGACCGCTCCTCAACAACTGAGGAAGATTATTCGTGGGGCGTTGGAGAAGCCCATGGGAACTGGGAAGAACACGGAGACAATGCAGGTTCTCCGCAGTGTTGTTATGTCGCTTGCCTGCAGATCGTTTGATGGTACTGTTTCCGACACGTGCCACTGGGCGGATGGGTTTCCGTTGAACCTCAGACTTTACCAAAAGCTCCTAGAATCATGTTTTGACCTCAATGAAGAGACATCTATTATTGAAGAGCTTGATGAGGTTTTAGAAGTCATGAAGAAGACATGGGTAGTCCTTGGAATAAACCAAATTTTGCATAATCTTTATTTTGCATGGGTTCTATTTCATCGATATGTTACCACCGGCCAAGTGGACAATGACCTGCTGATTGCGTCCAATAACCTCTTGGAGGAAGTTCAGCAAGATGCCAATGCCACAAAAGATCCAGCTTATTTGAAGATCGTAAGTTCAACATTGAATGCAATACTGGGTTGGACTGAGAAAAGGCTTCTTGCCTACCGTGGTGTTTTCAACCCTGGGAATATTGAGGTAATGCAAAACATTGTCTCCCTGGGGGTATTATCAGCAAAAGTACTAGTAGAGGATATTTCTCATGAGTATCGTAGGAAGAAAGAAGTTGATGTAGCGCGTGACAGAGTTGACAGCTACGTAAGATCATCAATGCGCACTGCTTTTGCTCAGAAACTGGAAAAAGTAGGCTCCGACAAGCGTCTATCAAAGAGCCAAAAGAATCATATTCTTACCCTCTCCATCCTTGCAAATGAAGTTAGTGAACTGGCTTTTAGTGAGAAGGAGATATATGGTCCAGTATTGAAGAGATGGCACCCTTTTGCAACGGGTGTTGCTATGGCTATGCTGCATTCTTGCTATGGAGACGAGCTCAAGCAATTTGTGGATGGTGTCAGTGAGTTGACTCCTGATACTGTACAAGTACTGAGAGCGGCTGACAAATTGGAGAAAGATCTTGTGCAGATTGCCGTTGAAGATTTAGTCGATAGTGAGGATGGCGGGAAATCCATCATACAGGAGATGCCTCCTTACGAGGCTGAAGCTGTAATGGCTGAACTTGCGAAGGATTGGATAAGGACAAGAGTGGACAGGCTGAAGGAATGGGTTGACAGAAATCTGCAACAAGAGGTCTGGAATCCACAAGCGAACAAAGAACGCCTTGCTCCTTCTGCCATTGAAGTTTTACGTATTATAGATGAAACACTGGAAGCATTCTTTATGTTACCTATACCAATGCATCCTGGATTGATTCCAGAATTGAAGACCGGTCTTGATAGATGTCTTCAATACTATGTATCAAAGGCCAAGACTGGCTGTGGAACCCGAATCACCTTCATTCCCAGTATGCCTGCTCTGACTAGATGTTCAGCAGGATCAAAATTTCATGGTGTATTCAAGAAGAAGGAACGGTCACATATAAACCAGAGGAGGAAAGCTCAGGTTGGAAGTACAAATGGGGATAGTTTGTTTGGAATTCCGCAACTATGCGTTCGCATCAATACTCTGCAGCTGATCCGAACAGAGTTGGGAGCTTTTGAGAAGAGGATTTTTGCTCATCTTGGGAACTTGGAATCCACTCAAAAGGGAGATTTTGCTAATGGGATGAGCAAAATGTTTGAGCTGTCAGCATCTTCTTGTGTGGAAGGGATCCAACAACTTTGTGAGGCAACAGCTTACAAGGTTGTTTTCCATGAACTAAGTCATGTTCTTTGGGATGGCTTGTATAATGTGGATGCTTCTTCTTGTAGAATTGAGCCTTTTCTTCAGGAACTCGAGCAATTTTTGGAGATTATCTCGTCAACAGTCCATGACAGAGTTAGAACACGTGTTATTACGGATGTCATGAAAGCTTCTTTTGATGGGTTCTTGTTGGTTTTGCTTGCTGGAGGCCCTTCCCGCAGTTTCACACAGAGAGATTCTGACATAATAGAGGAGGATTTTAAATTTCTGACCGATTTGTTCTGGTCAGGTGGGGATGGATTACCAGCTGATTTAATAGAGAAGCTGTCAACCACTGTTAAGGACATTCTTCCTCTGTACCATACTGATACCGATAGCCTTATTGAGCAGTTCAAGCACGTGACTCTGGAAAACTATGGCTCTTCTGGCAAGTCCCACCTGCCATTGCCTCCAACTTCCGATAAGTGGAATTCCAATGACCCAAATACACTTCTACGTGTCTTGTGTCATAGGAATGATGAGACTGCAGCCAAGTTCCTGAAGAAGACTTATAATTTGCCTAAGAAGCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

976

Amino Acids

109.88

Weight (kDa)

6.75

Isoelectric Point (pI)

47.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011157)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2907
AarI CACCTGC 1 cut(s) 2802
AatII GACGTC 1 cut(s) 317
Acc16I TGCGCA 1 cut(s) 1331
Acc36I ACCTGC 3 cut(s) 724, 1035, 2802
AccB1I GGYRCC 1 cut(s) 1488
AccBSI CCGCTC 2 cut(s) 656, 1607
AccI GTMKAC 2 cut(s) 201, 293
AccII CGCG 1 cut(s) 1294
AccIII TCCGGA 1 cut(s) 450
AclWI GGATC 6 cut(s) 202, 1082, 2056, 2182, 2317, 2330
AcoI YGGCCR 1 cut(s) 1009
AcsI RAATTY 6 cut(s) 589, 954, 2054, 2148, 2618, 2824
AcuI CTGAAG 5 cut(s) 284, 1734, 1790, 2423, 2915
AcvI CACGTG 3 cut(s) 798, 2501, 2755
AcyI GRCGYC 2 cut(s) 314, 353
AfaI GTAC 7 cut(s) 254, 784, 1239, 1593, 1599, 2125, 2714
AfiI CCNNNNNNNGG 7 cut(s) 98, 154, 421, 450, 808, 1054, 2820
AflIII ACRYGT 4 cut(s) 795, 2498, 2500, 2851
AgeI ACCGGT 1 cut(s) 1940
AhlI ACTAGT 1 cut(s) 1240
AjnI CCWGG 3 cut(s) 1180, 1215, 1915
AloI GAACNNNNNNTCC 2 cut(s) 2231, 2263
Alw21I GWGCWC 3 cut(s) 233, 525, 1548
Alw26I GTCTC 8 cut(s) 12, 358, 644, 719, 872, 1216, 1533, 2870
AlwI GGATC 6 cut(s) 202, 1082, 2056, 2182, 2317, 2330
AlwNI CAGNNNCTG 1 cut(s) 1351
Ama87I CYCGRG 2 cut(s) 368, 2447
Aor13HI TCCGGA 1 cut(s) 450
AoxI GGCC 6 cut(s) 163, 235, 273, 1009, 1977, 2563
ApaI GGGCCC 1 cut(s) 167
ApeKI GCWGC 5 cut(s) 473, 529, 1522, 2182, 2882
ApoI RAATTY 6 cut(s) 589, 954, 2054, 2148, 2618, 2824
ArsI GACNNNNNNTTYG 4 cut(s) 11, 43, 2893, 2925
AsiGI ACCGGT 1 cut(s) 1940
AspLEI GCGC 2 cut(s) 1294, 1332
AsuC2I CCSGG 5 cut(s) 99, 128, 167, 191, 388
AsuHPI GGTGA 1 cut(s) 1996
AvaI CYCGRG 2 cut(s) 368, 2447
AvaII GGWCC 6 cut(s) 101, 169, 184, 384, 412, 1469
BaeGI GKGCMC 1 cut(s) 167
BamHI GGATCC 1 cut(s) 2322
BanI GGYRCC 1 cut(s) 1488
BanII GRGCYC 5 cut(s) 167, 233, 460, 525, 1548
BbrPI CACGTG 3 cut(s) 798, 2501, 2755
BbsI GAAGAC 6 cut(s) 19, 141, 932, 1943, 1949, 2906
Bbv12I GWGCWC 3 cut(s) 233, 525, 1548
BbvI GCAGC 5 cut(s) 460, 541, 1509, 2194, 2894
BceAI ACGGC 2 cut(s) 366, 1628
BciT130I CCWGG 3 cut(s) 1182, 1217, 1917
BciVI GTATCC 1 cut(s) 633
BcnI CCSGG 5 cut(s) 99, 128, 167, 191, 388
BcoDI GTCTC 8 cut(s) 12, 358, 644, 719, 872, 1216, 1533, 2870
BcuI ACTAGT 1 cut(s) 1240
BfaI CTAG 4 cut(s) 212, 851, 1241, 2034
BfmI CTRYAG 3 cut(s) 766, 2180, 2880
BfuAI ACCTGC 3 cut(s) 724, 1035, 2802
BfuI GTATCC 1 cut(s) 633
BglII AGATCT 1 cut(s) 1627
BisI GCNGC 8 cut(s) 260, 330, 474, 530, 1523, 1608, 2183, 2883
BlsI GCNGC 8 cut(s) 261, 331, 475, 531, 1524, 1609, 2184, 2884
BmcAI AGTACT 2 cut(s) 1239, 1599
Bme1390I CCNGG 8 cut(s) 99, 128, 167, 191, 388, 1182, 1217, 1917
Bme18I GGWCC 6 cut(s) 101, 169, 184, 384, 412, 1469
BmeT110I CYCGRG 2 cut(s) 368, 2447
BmiI GGNNCC 8 cut(s) 46, 103, 165, 413, 1366, 1490, 1996, 2324
BmrFI CCNGG 8 cut(s) 99, 128, 167, 191, 388, 1182, 1217, 1917
BmrI ACTGGG 4 cut(s) 720, 814, 1142, 2010
BmsI GCATC 6 cut(s) 1060, 1686, 1921, 2178, 2312, 2398
BmuI ACTGGG 4 cut(s) 720, 814, 1142, 2010
BoxI GACNNNNGTC 1 cut(s) 1374
BpiI GAAGAC 6 cut(s) 19, 141, 932, 1943, 1949, 2906
BplI GAGNNNNNCTC 8 cut(s) 447, 479, 1530, 1562, 2095, 2127, 2453, 2485
BpmI CTGGAG 2 cut(s) 539, 2580
Bpu10I CCTNAGC 1 cut(s) 2112
BpuEI CTTGAG 1 cut(s) 1532
BpuMI CCSGG 5 cut(s) 99, 128, 167, 191, 388
Bsa29I ATCGAT 1 cut(s) 994
BsaAI YACGTR 6 cut(s) 798, 1315, 1862, 2501, 2755, 2852
BsaHI GRCGYC 2 cut(s) 314, 353
BsaI GGTCTC 1 cut(s) 644
BsaJI CCNNGG 7 cut(s) 702, 940, 1165, 1180, 1181, 1215, 1216
BsaWI WCCGGW 3 cut(s) 279, 450, 1940
BsaXI ACNNNNNCTCC 2 cut(s) 1196, 1226
Bsc4I CCNNNNNNNGG 7 cut(s) 98, 154, 421, 450, 808, 1054, 2820
Bse118I RCCGGY 2 cut(s) 1007, 1940
Bse1I ACTGG 9 cut(s) 715, 809, 1137, 1356, 1446, 1472, 1884, 1990, 2016
Bse3DI GCAATG 1 cut(s) 2798
BseAI TCCGGA 1 cut(s) 450
BseBI CCWGG 3 cut(s) 1182, 1217, 1917
BseCI ATCGAT 1 cut(s) 994
BseDI CCNNGG 7 cut(s) 702, 940, 1165, 1180, 1181, 1215, 1216
BseLI CCNNNNNNNGG 7 cut(s) 98, 154, 421, 450, 808, 1054, 2820
BseMI GCAATG 1 cut(s) 2798
BseMII CTCAG 8 cut(s) 20, 478, 659, 844, 1134, 1358, 1592, 2126
BseNI ACTGG 9 cut(s) 715, 809, 1137, 1356, 1446, 1472, 1884, 1990, 2016
BseRI GAGGAG 4 cut(s) 598, 648, 2116, 2621
BseSI GKGCMC 1 cut(s) 167
BseXI GCAGC 5 cut(s) 460, 541, 1509, 2194, 2894
BseYI CCCAGC 1 cut(s) 484
BsgI GTGCAG 1 cut(s) 1655
Bsh1236I CGCG 1 cut(s) 1294
Bsh1285I CGRYCG 1 cut(s) 280
BshFI GGCC 6 cut(s) 165, 237, 275, 1011, 1979, 2565
BshNI GGYRCC 1 cut(s) 1488
BshTI ACCGGT 1 cut(s) 1940
BshVI ATCGAT 1 cut(s) 994
BsiEI CGRYCG 1 cut(s) 280
BsiHKAI GWGCWC 3 cut(s) 233, 525, 1548
BsiHKCI CYCGRG 2 cut(s) 368, 2447
BslFI GGGAC 3 cut(s) 501, 624, 2773
BslI CCNNNNNNNGG 7 cut(s) 98, 154, 421, 450, 808, 1054, 2820
BsmAI GTCTC 8 cut(s) 12, 358, 644, 719, 872, 1216, 1533, 2870
BsmBI CGTCTC 1 cut(s) 1533
BsmFI GGGAC 3 cut(s) 501, 624, 2773
BsmI GAATGC 3 cut(s) 1129, 1525, 1886
BsnI GGCC 6 cut(s) 165, 237, 275, 1011, 1979, 2565
Bso31I GGTCTC 1 cut(s) 644
BsoBI CYCGRG 2 cut(s) 368, 2447
Bsp120I GGGCCC 1 cut(s) 163
Bsp1286I GDGCHC 5 cut(s) 167, 233, 460, 525, 1548
Bsp13I TCCGGA 1 cut(s) 450
Bsp1407I TGTACA 1 cut(s) 1591
Bsp19I CCATGG 1 cut(s) 702
BspANI GGCC 6 cut(s) 165, 237, 275, 1011, 1979, 2565
BspCNI CTCAG 8 cut(s) 19, 477, 660, 843, 1135, 1357, 1593, 2125
BspDI ATCGAT 1 cut(s) 994
BspEI TCCGGA 1 cut(s) 450
BspFNI CGCG 1 cut(s) 1294
BspHI TCATGA 3 cut(s) 918, 1258, 2517
BspLI GGNNCC 8 cut(s) 46, 103, 165, 413, 1366, 1490, 1996, 2324
BspMAI CTGCAG 3 cut(s) 770, 2184, 2884
BspMI ACCTGC 3 cut(s) 724, 1035, 2802
BspPI GGATC 6 cut(s) 202, 1082, 2056, 2182, 2317, 2330
BspQI GCTCTTC 2 cut(s) 888, 2782
BspT107I GGYRCC 1 cut(s) 1488
BspTNI GGTCTC 1 cut(s) 644
BsrBI CCGCTC 2 cut(s) 656, 1607
BsrDI GCAATG 1 cut(s) 2798
BsrFI RCCGGY 2 cut(s) 1007, 1940
BsrGI TGTACA 1 cut(s) 1591
BsrI ACTGG 9 cut(s) 715, 809, 1137, 1356, 1446, 1472, 1884, 1990, 2016
BssAI RCCGGY 2 cut(s) 1007, 1940
BssECI CCNNGG 7 cut(s) 702, 940, 1165, 1180, 1181, 1215, 1216
BssNI GRCGYC 2 cut(s) 314, 353
BssT1I CCWWGG 2 cut(s) 702, 940
Bst2UI CCWGG 3 cut(s) 1182, 1217, 1917
Bst4CI ACNGT 8 cut(s) 199, 384, 787, 1166, 1591, 2085, 2479, 2692
Bst6I CTCTTC 5 cut(s) 870, 888, 1475, 2210, 2782
BstACI GRCGYC 2 cut(s) 314, 353
BstAUI TGTACA 1 cut(s) 1591
BstBAI YACGTR 6 cut(s) 798, 1315, 1862, 2501, 2755, 2852
BstC8I GCNNGC 5 cut(s) 223, 762, 766, 2025, 2556
BstDSI CCRYGG 2 cut(s) 702, 1165
BstENI CCTNNNNNAGG 1 cut(s) 1052
BstFNI CGCG 1 cut(s) 1294
BstHHI GCGC 2 cut(s) 1294, 1332
BstMAI GTCTC 8 cut(s) 12, 358, 644, 719, 872, 1216, 1533, 2870
BstMCI CGRYCG 1 cut(s) 280
BstNI CCWGG 3 cut(s) 1182, 1217, 1917
BstNSI RCATGY 1 cut(s) 225
BstPAI GACNNNNGTC 1 cut(s) 1374
BstSCI CCNGG 8 cut(s) 97, 126, 165, 189, 386, 1180, 1215, 1915
BstSFI CTRYAG 3 cut(s) 766, 2180, 2880
BstSLI GKGCMC 1 cut(s) 167
BstSNI TACGTA 2 cut(s) 1315, 1862
BstUI CGCG 1 cut(s) 1294
BstV1I GCAGC 5 cut(s) 460, 541, 1509, 2194, 2894
BstV2I GAAGAC 6 cut(s) 19, 141, 932, 1943, 1949, 2906
BstX2I RGATCY 4 cut(s) 207, 1087, 1627, 2322
BstYI RGATCY 4 cut(s) 207, 1087, 1627, 2322
Bsu15I ATCGAT 1 cut(s) 994
BsuI GTATCC 1 cut(s) 633
BsuRI GGCC 6 cut(s) 165, 237, 275, 1011, 1979, 2565
BsuTUI ATCGAT 1 cut(s) 994
BtgI CCRYGG 2 cut(s) 702, 1165
BtsI GCAGTG 2 cut(s) 751, 1332
BtsIMutI CAGTG 6 cut(s) 751, 802, 1332, 1576, 1877, 2688
BveI ACCTGC 3 cut(s) 724, 1035, 2802
Cac8I GCNNGC 5 cut(s) 223, 762, 766, 2025, 2556
CaiI CAGNNNCTG 1 cut(s) 1351
CciI TCATGA 3 cut(s) 918, 1258, 2517
CfoI GCGC 2 cut(s) 1294, 1332
Cfr10I RCCGGY 2 cut(s) 1007, 1940
ClaI ATCGAT 1 cut(s) 994
CpoI CGGWCCG 1 cut(s) 384
CseI GACGC 4 cut(s) 304, 342, 1026, 1364
Csp6I GTAC 7 cut(s) 253, 783, 1238, 1592, 1598, 2124, 2713
CspAI ACCGGT 1 cut(s) 1940
CspI CGGWCCG 1 cut(s) 384
CviQI GTAC 7 cut(s) 253, 783, 1238, 1592, 1598, 2124, 2713
DraI TTTAAA 1 cut(s) 2617
EaeI YGGCCR 1 cut(s) 1009
Eam1104I CTCTTC 5 cut(s) 870, 888, 1475, 2210, 2782
EarI CTCTTC 5 cut(s) 870, 888, 1475, 2210, 2782
EciI GGCGGA 1 cut(s) 824
Ecl136II GAGCTC 3 cut(s) 231, 523, 1546
Eco105I TACGTA 2 cut(s) 1315, 1862
Eco130I CCWWGG 2 cut(s) 702, 940
Eco24I GRGCYC 5 cut(s) 167, 233, 460, 525, 1548
Eco31I GGTCTC 1 cut(s) 644
Eco47I GGWCC 6 cut(s) 101, 169, 184, 384, 412, 1469
Eco53kI GAGCTC 3 cut(s) 231, 523, 1546
Eco57I CTGAAG 5 cut(s) 284, 1734, 1790, 2423, 2915
Eco72I CACGTG 3 cut(s) 798, 2501, 2755
Eco88I CYCGRG 2 cut(s) 368, 2447
EcoICRI GAGCTC 3 cut(s) 231, 523, 1546
EcoNI CCTNNNNNAGG 1 cut(s) 1052
EcoO109I RGGNCCY 1 cut(s) 2564
EcoRI GAATTC 2 cut(s) 2148, 2824
EcoRII CCWGG 3 cut(s) 1180, 1215, 1915
EcoT14I CCWWGG 2 cut(s) 702, 940
EcoT22I ATGCAT 1 cut(s) 1914
EcoT38I GRGCYC 5 cut(s) 167, 233, 460, 525, 1548
ErhI CCWWGG 2 cut(s) 702, 940
Esp3I CGTCTC 1 cut(s) 1533
FalI AAGNNNNNCTT 4 cut(s) 597, 629, 1818, 1850
FaqI GGGAC 3 cut(s) 501, 624, 2773
FauI CCCGC 2 cut(s) 1667, 2579
FauNDI CATATG 1 cut(s) 630
FblI GTMKAC 2 cut(s) 201, 293
Fnu4HI GCNGC 8 cut(s) 260, 330, 474, 530, 1523, 1608, 2183, 2883
FriOI GRGCYC 5 cut(s) 167, 233, 460, 525, 1548
Fsp4HI GCNGC 8 cut(s) 260, 330, 474, 530, 1523, 1608, 2183, 2883
FspAI RTGCGCAY 1 cut(s) 1331
FspBI CTAG 4 cut(s) 212, 851, 1241, 2034
FspI TGCGCA 1 cut(s) 1331
GlaI GCGC 2 cut(s) 1293, 1331
GluI GCNGC 8 cut(s) 260, 330, 474, 530, 1523, 1608, 2183, 2883
GsaI CCCAGC 1 cut(s) 488
GsuI CTGGAG 2 cut(s) 539, 2580
HaeIII GGCC 6 cut(s) 165, 237, 275, 1011, 1979, 2565
HgaI GACGC 4 cut(s) 304, 342, 1026, 1364
HhaI GCGC 2 cut(s) 1294, 1332
Hin1I GRCGYC 2 cut(s) 314, 353
Hin6I GCGC 2 cut(s) 1292, 1330
HinP1I GCGC 2 cut(s) 1292, 1330
HincII GTYRAC 6 cut(s) 294, 1306, 1578, 1783, 2475, 2685
HindII GTYRAC 6 cut(s) 294, 1306, 1578, 1783, 2475, 2685
HindIII AAGCTT 2 cut(s) 573, 2523
HphI GGTGA 1 cut(s) 1996
Hpy99I CGWCG 2 cut(s) 298, 358
HpyCH4III ACNGT 8 cut(s) 199, 384, 787, 1166, 1591, 2085, 2479, 2692
HpyCH4IV ACGT 8 cut(s) 251, 314, 797, 1314, 1861, 2500, 2754, 2851
HpySE526I ACGT 8 cut(s) 251, 314, 797, 1314, 1861, 2500, 2754, 2851
Hsp92I GRCGYC 2 cut(s) 314, 353
HspAI GCGC 2 cut(s) 1292, 1330
Kpn2I TCCGGA 1 cut(s) 450
LguI GCTCTTC 2 cut(s) 888, 2782
Lsp1109I GCAGC 5 cut(s) 460, 541, 1509, 2194, 2894
LweI GCATC 6 cut(s) 1060, 1686, 1921, 2178, 2312, 2398
MaeI CTAG 4 cut(s) 212, 851, 1241, 2034
MaeII ACGT 8 cut(s) 251, 314, 797, 1314, 1861, 2500, 2754, 2851
MaeIII GTNAC 5 cut(s) 1000, 1295, 1896, 2085, 2755
MbiI CCGCTC 2 cut(s) 656, 1607
MflI RGATCY 4 cut(s) 207, 1087, 1627, 2322
MhlI GDGCHC 5 cut(s) 167, 233, 460, 525, 1548
MlyI GAGTC 6 cut(s) 33, 120, 173, 360, 1573, 2752
Mph1103I ATGCAT 1 cut(s) 1914
MroI TCCGGA 1 cut(s) 450
MseI TTAA 3 cut(s) 2616, 2669, 2694
MslI CAYNNNNRTG 2 cut(s) 996, 2868
MspA1I CMGCKG 4 cut(s) 247, 484, 2185, 2663
MspR9I CCNGG 8 cut(s) 99, 128, 167, 191, 388, 1182, 1217, 1917
Mva1269I GAATGC 3 cut(s) 1129, 1525, 1886
MvaI CCWGG 3 cut(s) 1182, 1217, 1917
MvnI CGCG 1 cut(s) 1294
NciI CCSGG 5 cut(s) 99, 128, 167, 191, 388
NcoI CCATGG 1 cut(s) 702
NdeI CATATG 1 cut(s) 630
NlaIV GGNNCC 8 cut(s) 46, 103, 165, 413, 1366, 1490, 1996, 2324
NmuCI GTSAC 3 cut(s) 1295, 2085, 2755
NsbI TGCGCA 1 cut(s) 1331
NsiI ATGCAT 1 cut(s) 1914
NspI RCATGY 1 cut(s) 225
PaeI GCATGC 1 cut(s) 225
PaeR7I CTCGAG 1 cut(s) 2447
PagI TCATGA 3 cut(s) 918, 1258, 2517
PaqCI CACCTGC 1 cut(s) 2802
PasI CCCWGGG 2 cut(s) 1181, 1216
PciSI GCTCTTC 2 cut(s) 888, 2782
PcsI WCGNNNNNNNCGW 1 cut(s) 320
PctI GAATGC 3 cut(s) 1129, 1525, 1886
PfeI GAWTC 8 cut(s) 447, 854, 1396, 1810, 1924, 2001, 2246, 2591
PflFI GACNNNGTC 1 cut(s) 23
PfoI TCCNGGA 2 cut(s) 189, 1915
PinAI ACCGGT 1 cut(s) 1940
PkrI GCNGC 8 cut(s) 261, 331, 475, 531, 1524, 1609, 2184, 2884
PleI GAGTC 6 cut(s) 32, 119, 173, 360, 1573, 2752
PmaCI CACGTG 3 cut(s) 798, 2501, 2755
PmlI CACGTG 3 cut(s) 798, 2501, 2755
PpsI GAGTC 6 cut(s) 32, 119, 173, 360, 1573, 2752
Ppu21I YACGTR 6 cut(s) 798, 1315, 1862, 2501, 2755, 2852
PshAI GACNNNNGTC 1 cut(s) 1374
PsiI TTATAA 1 cut(s) 2907
Psp124BI GAGCTC 3 cut(s) 233, 525, 1548
Psp6I CCWGG 3 cut(s) 1180, 1215, 1915
PspCI CACGTG 3 cut(s) 798, 2501, 2755
PspFI CCCAGC 1 cut(s) 484
PspGI CCWGG 3 cut(s) 1180, 1215, 1915
PspN4I GGNNCC 8 cut(s) 46, 103, 165, 413, 1366, 1490, 1996, 2324
PspOMI GGGCCC 1 cut(s) 163
PspXI VCTCGAGB 1 cut(s) 2447
PstI CTGCAG 3 cut(s) 770, 2184, 2884
PstNI CAGNNNCTG 1 cut(s) 1351
PsuI RGATCY 4 cut(s) 207, 1087, 1627, 2322
PsyI GACNNNGTC 1 cut(s) 23
PvuII CAGCTG 3 cut(s) 484, 2185, 2663
RsaI GTAC 7 cut(s) 254, 784, 1239, 1593, 1599, 2125, 2714
RsaNI GTAC 7 cut(s) 253, 783, 1238, 1592, 1598, 2124, 2713
RseI CAYNNNNRTG 2 cut(s) 996, 2868
Rsr2I CGGWCCG 1 cut(s) 384
RsrII CGGWCCG 1 cut(s) 384
SacI GAGCTC 3 cut(s) 233, 525, 1548
SalI GTCGAC 1 cut(s) 292
SapI GCTCTTC 2 cut(s) 888, 2782
SaqAI TTAA 3 cut(s) 2616, 2669, 2694
SatI GCNGC 8 cut(s) 260, 330, 474, 530, 1523, 1608, 2183, 2883
ScaI AGTACT 2 cut(s) 1239, 1599
SchI GAGTC 6 cut(s) 33, 120, 173, 360, 1573, 2752
ScrFI CCNGG 8 cut(s) 99, 128, 167, 191, 388, 1182, 1217, 1917
SduI GDGCHC 5 cut(s) 167, 233, 460, 525, 1548
SfaNI GCATC 6 cut(s) 1060, 1686, 1921, 2178, 2312, 2398
SfcI CTRYAG 3 cut(s) 766, 2180, 2880
Sfr274I CTCGAG 1 cut(s) 2447
SinI GGWCC 6 cut(s) 101, 169, 184, 384, 412, 1469
SlaI CTCGAG 1 cut(s) 2447
SmiMI CAYNNNNRTG 2 cut(s) 996, 2868
SmlI CTYRAG 2 cut(s) 1547, 2447
SmoI CTYRAG 2 cut(s) 1547, 2447
SnaBI TACGTA 2 cut(s) 1315, 1862
SpeI ACTAGT 1 cut(s) 1240
SphI GCATGC 1 cut(s) 225
SspI AATATT 1 cut(s) 1189
SspMI CTAG 4 cut(s) 212, 851, 1241, 2034
SstI GAGCTC 3 cut(s) 233, 525, 1548
StyD4I CCNGG 8 cut(s) 97, 126, 165, 189, 386, 1180, 1215, 1915
StyI CCWWGG 2 cut(s) 702, 940
TaaI ACNGT 8 cut(s) 199, 384, 787, 1166, 1591, 2085, 2479, 2692
TaiI ACGT 8 cut(s) 254, 317, 800, 1317, 1864, 2503, 2757, 2854
TaqI TCGA 4 cut(s) 293, 994, 1659, 2448
TaqII GACCGA 2 cut(s) 452, 2642
TatI WGTACW 4 cut(s) 1237, 1591, 1597, 2123
TauI GCSGC 3 cut(s) 262, 332, 1610
TfiI GAWTC 8 cut(s) 447, 854, 1396, 1810, 1924, 2001, 2246, 2591
Tru1I TTAA 3 cut(s) 2616, 2669, 2694
Tru9I TTAA 3 cut(s) 2616, 2669, 2694
TscAI CASTG 6 cut(s) 751, 809, 1339, 1576, 1884, 2695
TseFI GTSAC 3 cut(s) 1295, 2085, 2755
TseI GCWGC 5 cut(s) 473, 529, 1522, 2182, 2882
Tsp45I GTSAC 3 cut(s) 1295, 2085, 2755
TspGWI ACGGA 3 cut(s) 737, 810, 2525
TspRI CASTG 6 cut(s) 751, 809, 1339, 1576, 1884, 2695
Tth111I GACNNNGTC 1 cut(s) 23
VpaK11BI GGWCC 6 cut(s) 101, 169, 184, 384, 412, 1469
XagI CCTNNNNNAGG 1 cut(s) 1052
XapI RAATTY 6 cut(s) 589, 954, 2054, 2148, 2618, 2824
XceI RCATGY 1 cut(s) 225
XcmI CCANNNNNNNNNTGG 3 cut(s) 809, 1012, 1048
XhoI CTCGAG 1 cut(s) 2447
XmiI GTMKAC 2 cut(s) 201, 293
XspI CTAG 4 cut(s) 212, 851, 1241, 2034
ZraI GACGTC 1 cut(s) 315
ZrmI AGTACT 2 cut(s) 1239, 1599
Zsp2I ATGCAT 1 cut(s) 1914
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.