Rmu_sc0002407.1_g000007

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002407.1
OG0011157
Physical Location & Seq
Reverse (-)
32338 .. 35153
2816 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002407.1_g000007.1.cds

Sequence Viewer

Length: 2427 bp
atggttttgcctctggagctgttacagcatttcaggtcgttagattttgcgaatcagcaggagtatgaagcttggcagaggaggaatttgaaggttcttgaagtgggactcctggtgtatcctcatatgccgtcggatagaaaagacaccgctcctcaacagctccggaagattatacgtggggccttggagaaacccatggaaactggaaagaacaccgagacaatgcaagttctccgcagtcttgttatgtcgcttgcctgcagatcgtttgatggtactgtttccgacacatgccactgggcagatgggtttccgttgaatctcaggctctaccaaaagctcctggaatcgtgttttgacctgaatgaagaaacttctattattgaagagcttgatgaggttttagaagtcatgaagaagacctgggtagtccttggaataaaccaaattctgcataatctgtgtttcgcatgggttttatttcatcgatatgttacaactggccaagtggataatgacctgctgtttgcagccaataacctcttggcggaagttcagcaagatgccaatgccacaaaagatccatcttatttgaagatcgtaagttcaacattgaatgcaatcctgggttggactgagagaaggcttcttgcctaccgtaatgttttcaacactggcaatattgagtcgatgcaaaacattgtctccctgggggtattatcagcaaaagtactagtagaggatatctctcacgagtatcgtaggaagagaaaagaagttgatgtggcacgtgacagggttgacacctacataagatcatcaatacgcaccgcttttgctcagaaactggaaaaagtgggctccaacaagcgcctatcaaagagccaaaagaatcgtattcctaccttgtccgtccttgcagcagaagttagcgaactggcctttagtgagaaagatatatttggtccagtgttgaagagatggcacccttttgcaacgggtgttgctatggctacgctgcattcttgctatggagacgagctcaagcaatttgtggatggtatcagtgagttgactcctgatactgtacaagtactaaaagctgctgacaaattggagaaagatcttgtgcagattgctgtcgaagattcagtagatagtgaggatggtgggaaatccatcatacaggagatgcctccttacgaggctgaagctgtaatggctgagcttgcgaaggcttggataaggacaagattggacaggctgaaggaatgggttgacagaaatctgcaacaagaggtctggaatccacaagcaaacaaagaatgcttagctccttctgccattgaagttttacgcattgtagatgaaacattggaagcattttttatgttgcctataccaatgcatcctggcttgattccagaattgaagactggtcttgatagatgtcttcaatactatgtatccaaggccaagactggctgtggaacccgaattaccttcattcccactatgcctgctttgactagatgttcagcgggatcaaaatttcatggtgtattcaagaagaaggaaaggtcacatataaaccagaggaggaaatctcaggttggaagtacaaatggggatggttcgtttgggattccgcaactttgtgttcgcattaatactctgcagcatattcgaatggagttgggagtttttgagaagaggattgttgctcatcttgggaacttggaatccactcaaaagggagattttgcgaatgggatgggcaaaatgtttgagctctcagaacctacttgtttagaagggatccaacaactttgtgaggcaacagcttacaaggttgttttccatgaactaagtcatgttctttgggatggcttgtataatgtggatgctccctcatgtagaattgagccttttcttcaggaacttgagcaatttttggagattatctcgtcaacagttcacaacagagttagaacgcgtcttattacggatgtcatgaaagcttcttttgacgggttcttattggttttgctagctggaggcccttcccgcagtttcacactgagagattctaacataatagaggaggattttaaatttctgacagatttgttctggtcaaacggggatggattaccagctgatttaatagctaagttgtcaaccactgttaaggacatccttcctctctaccgtactgagactgatagccttattgaaaagttcaagcgcacgactctggagaactatggctcttctgcgaagtcccacctgccattgcctccaacttccgatgagtggaattccaatgacccaaatacacttctacgtgtcttatgtcataggaatgatgagactgcagccaagtttctgaagaagacttacaatttgcctaaaaagctgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

808

Amino Acids

91.59

Weight (kDa)

6.36

Isoelectric Point (pI)

42.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20010 AT2G20010
fragaria_vesca FvH4_1g05840
malus_domestica MD02G1060400.v1.1 MD15G1193900.v1.1
prunus_persica Prupe.7G222400_v2.0.a1 Prupe.7G222400_v2.0.a1
pyrus_communis pycom02g04960 pycom15g17370
rosa_chinensis RchiOBHm_Chr2g0091501 RchiOBHm_Chr2g0091591
rosa_laevigata RLG00000016231
rosa_multiflora Rmu_sc0002407.1_g000007
rosa_roxburghii Rroxscaffold_2G00149980
rosa_rugosa Rorug02G0018300
rosa_samantha Rh2AG063500 Rh2BG062900 Rh2CG064600 Rh2DG063000
rosa_wichuraiana Rw2G005690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2301
Acc36I ACCTGC 2 cut(s) 531, 2301
AccB1I GGYRCC 1 cut(s) 987
AccBSI CCGCTC 1 cut(s) 152
AccII CGCG 1 cut(s) 1999
AccIII TCCGGA 1 cut(s) 165
AciI CCGC 7 cut(s) 150, 238, 551, 834, 1544, 1652, 2071
AclWI GGATC 4 cut(s) 578, 1555, 1816, 1829
AcoI YGGCCR 1 cut(s) 505
AcsI RAATTY 5 cut(s) 85, 450, 1553, 2117, 2323
AcuI CTGAAG 4 cut(s) 1233, 1289, 1922, 2414
AcvI CACGTG 1 cut(s) 794
AfaI GTAC 6 cut(s) 280, 735, 1092, 1098, 1624, 2218
AfiI CCNNNNNNNGG 2 cut(s) 550, 2319
AflIII ACRYGT 2 cut(s) 1997, 2350
AhlI ACTAGT 1 cut(s) 736
AjnI CCWGG 6 cut(s) 111, 345, 425, 627, 711, 1414
AloI GAACNNNNNNTCC 2 cut(s) 1730, 1762
Alw21I GWGCWC 2 cut(s) 1047, 1797
Alw26I GTCTC 5 cut(s) 215, 712, 1032, 2216, 2369
AlwI GGATC 4 cut(s) 578, 1555, 1816, 1829
AlwNI CAGNNNCTG 1 cut(s) 850
Aor13HI TCCGGA 1 cut(s) 165
AoxI GGCC 5 cut(s) 183, 505, 942, 1476, 2062
ApeKI GCWGC 6 cut(s) 533, 923, 1021, 1106, 1681, 2381
ApoI RAATTY 5 cut(s) 85, 450, 1553, 2117, 2323
ArsI GACNNNNNNTTYG 4 cut(s) 512, 544, 2392, 2424
AseI ATTAAT 1 cut(s) 1671
AspLEI GCGC 2 cut(s) 876, 2253
AspS9I GGNCC 3 cut(s) 183, 968, 2063
AsuII TTCGAA 1 cut(s) 1690
AsuNHI GCTAGC 1 cut(s) 2053
AvaII GGWCC 1 cut(s) 968
BalI TGGCCA 1 cut(s) 507
BamHI GGATCC 1 cut(s) 1821
BanI GGYRCC 1 cut(s) 987
BanII GRGCYC 3 cut(s) 866, 1047, 1797
BarI GAAGNNNNNNTAC 2 cut(s) 2387, 2419
BauI CACGAG 1 cut(s) 755
BbrPI CACGTG 1 cut(s) 794
BbsI GAAGAC 4 cut(s) 428, 1442, 1448, 2405
Bbv12I GWGCWC 2 cut(s) 1047, 1797
BbvI GCAGC 6 cut(s) 545, 935, 1008, 1093, 1693, 2393
BceAI ACGGC 1 cut(s) 115
BcgI CGANNNNNNTGC 2 cut(s) 1670, 1704
BciT130I CCWGG 6 cut(s) 113, 347, 427, 629, 713, 1416
BciVI GTATCC 2 cut(s) 129, 1480
BcoDI GTCTC 5 cut(s) 215, 712, 1032, 2216, 2369
BcuI ACTAGT 1 cut(s) 736
BfaI CTAG 3 cut(s) 737, 1533, 2054
BfmI CTRYAG 3 cut(s) 262, 1679, 2379
BfoI RGCGCY 1 cut(s) 877
BfuAI ACCTGC 2 cut(s) 531, 2301
BfuI GTATCC 2 cut(s) 129, 1480
BglII AGATCT 1 cut(s) 1126
BisI GCNGC 6 cut(s) 534, 924, 1022, 1107, 1682, 2382
BlpI GCTNAGC 2 cut(s) 1227, 1333
BlsI GCNGC 6 cut(s) 535, 925, 1023, 1108, 1683, 2383
BmcAI AGTACT 2 cut(s) 735, 1098
Bme1390I CCNGG 6 cut(s) 113, 347, 427, 629, 713, 1416
Bme18I GGWCC 1 cut(s) 968
BmgT120I GGNCC 3 cut(s) 183, 968, 2063
BmiI GGNNCC 5 cut(s) 184, 865, 989, 1495, 1823
BmrFI CCNGG 6 cut(s) 113, 347, 427, 629, 713, 1416
BmrI ACTGGG 1 cut(s) 310
BmsI GCATC 5 cut(s) 556, 684, 1185, 1420, 1897
BmtI GCTAGC 1 cut(s) 2057
BmuI ACTGGG 1 cut(s) 310
BpiI GAAGAC 4 cut(s) 428, 1442, 1448, 2405
BplI GAGNNNNNCTC 8 cut(s) 734, 766, 1029, 1061, 1594, 1626, 1952, 1984
BpmI CTGGAG 3 cut(s) 35, 2079, 2282
Bpu1102I GCTNAGC 2 cut(s) 1227, 1333
Bpu14I TTCGAA 1 cut(s) 1690
BpuEI CTTGAG 2 cut(s) 1031, 1967
Bsa29I ATCGAT 1 cut(s) 490
BsaAI YACGTR 3 cut(s) 179, 794, 2351
BsaJI CCNNGG 8 cut(s) 186, 198, 426, 436, 628, 711, 712, 1473
BsaWI WCCGGW 1 cut(s) 165
BsaXI ACNNNNNCTCC 2 cut(s) 692, 722
Bsc4I CCNNNNNNNGG 2 cut(s) 550, 2319
Bse1I ACTGG 9 cut(s) 211, 305, 508, 682, 855, 945, 971, 1444, 1489
Bse3DI GCAATG 1 cut(s) 2297
BseAI TCCGGA 1 cut(s) 165
BseBI CCWGG 6 cut(s) 113, 347, 427, 629, 713, 1416
BseCI ATCGAT 1 cut(s) 490
BseDI CCNNGG 8 cut(s) 186, 198, 426, 436, 628, 711, 712, 1473
BseLI CCNNNNNNNGG 2 cut(s) 550, 2319
BseMI GCAATG 1 cut(s) 2297
BseMII CTCAG 8 cut(s) 340, 630, 857, 1218, 1625, 1812, 2075, 2211
BseNI ACTGG 9 cut(s) 211, 305, 508, 682, 855, 945, 971, 1444, 1489
BseRI GAGGAG 4 cut(s) 94, 144, 1615, 2120
BseXI GCAGC 6 cut(s) 545, 935, 1008, 1093, 1693, 2393
BsgI GTGCAG 1 cut(s) 1154
Bsh1236I CGCG 1 cut(s) 1999
BshFI GGCC 5 cut(s) 185, 507, 944, 1478, 2064
BshNI GGYRCC 1 cut(s) 987
BshVI ATCGAT 1 cut(s) 490
BsiHKAI GWGCWC 2 cut(s) 1047, 1797
BsiSI CCGG 1 cut(s) 166
BslFI GGGAC 2 cut(s) 120, 2272
BslI CCNNNNNNNGG 2 cut(s) 550, 2319
BsmAI GTCTC 5 cut(s) 215, 712, 1032, 2216, 2369
BsmBI CGTCTC 1 cut(s) 1032
BsmFI GGGAC 2 cut(s) 120, 2272
BsmI GAATGC 3 cut(s) 625, 1024, 1334
BsnI GGCC 5 cut(s) 185, 507, 944, 1478, 2064
Bsp119I TTCGAA 1 cut(s) 1690
Bsp1286I GDGCHC 3 cut(s) 866, 1047, 1797
Bsp13I TCCGGA 1 cut(s) 165
Bsp1407I TGTACA 1 cut(s) 1090
Bsp143I GATC 7 cut(s) 266, 583, 600, 818, 1126, 1547, 1821
Bsp1720I GCTNAGC 2 cut(s) 1227, 1333
Bsp19I CCATGG 1 cut(s) 198
BspACI CCGC 7 cut(s) 150, 238, 551, 834, 1544, 1652, 2071
BspANI GGCC 5 cut(s) 185, 507, 944, 1478, 2064
BspCNI CTCAG 8 cut(s) 339, 631, 856, 1219, 1624, 1811, 2076, 2212
BspDI ATCGAT 1 cut(s) 490
BspEI TCCGGA 1 cut(s) 165
BspFNI CGCG 1 cut(s) 1999
BspHI TCATGA 2 cut(s) 414, 2016
BspLI GGNNCC 5 cut(s) 184, 865, 989, 1495, 1823
BspMAI CTGCAG 3 cut(s) 266, 1683, 2383
BspMI ACCTGC 2 cut(s) 531, 2301
BspOI GCTAGC 1 cut(s) 2057
BspPI GGATC 4 cut(s) 578, 1555, 1816, 1829
BspQI GCTCTTC 2 cut(s) 384, 2281
BspT104I TTCGAA 1 cut(s) 1690
BspT107I GGYRCC 1 cut(s) 987
BsrBI CCGCTC 1 cut(s) 152
BsrDI GCAATG 1 cut(s) 2297
BsrGI TGTACA 1 cut(s) 1090
BsrI ACTGG 9 cut(s) 211, 305, 508, 682, 855, 945, 971, 1444, 1489
BssECI CCNNGG 8 cut(s) 186, 198, 426, 436, 628, 711, 712, 1473
BssMI GATC 7 cut(s) 266, 583, 600, 818, 1126, 1547, 1821
BssSI CACGAG 1 cut(s) 755
BssT1I CCWWGG 4 cut(s) 186, 198, 436, 1473
Bst2BI CACGAG 1 cut(s) 755
Bst2UI CCWGG 6 cut(s) 113, 347, 427, 629, 713, 1416
Bst4CI ACNGT 6 cut(s) 283, 662, 1090, 1978, 2191, 2216
Bst6I CTCTTC 5 cut(s) 384, 764, 974, 1709, 2281
BstAUI TGTACA 1 cut(s) 1090
BstBAI YACGTR 3 cut(s) 179, 794, 2351
BstBI TTCGAA 1 cut(s) 1690
BstC8I GCNNGC 5 cut(s) 258, 262, 1233, 1524, 2055
BstDSI CCRYGG 1 cut(s) 198
BstFNI CGCG 1 cut(s) 1999
BstH2I RGCGCY 1 cut(s) 877
BstHHI GCGC 2 cut(s) 876, 2253
BstKTI GATC 7 cut(s) 269, 586, 603, 821, 1129, 1550, 1824
BstMAI GTCTC 5 cut(s) 215, 712, 1032, 2216, 2369
BstMBI GATC 7 cut(s) 266, 583, 600, 818, 1126, 1547, 1821
BstMWI GCNNNNNNNGC 7 cut(s) 16, 25, 1223, 1232, 1343, 2070, 2419
BstNI CCWGG 6 cut(s) 113, 347, 427, 629, 713, 1416
BstNSI RCATGY 1 cut(s) 297
BstSCI CCNGG 6 cut(s) 111, 345, 425, 627, 711, 1414
BstSFI CTRYAG 3 cut(s) 262, 1679, 2379
BstUI CGCG 1 cut(s) 1999
BstV1I GCAGC 6 cut(s) 545, 935, 1008, 1093, 1693, 2393
BstV2I GAAGAC 4 cut(s) 428, 1442, 1448, 2405
BstX2I RGATCY 3 cut(s) 583, 1126, 1821
BstYI RGATCY 3 cut(s) 583, 1126, 1821
Bsu15I ATCGAT 1 cut(s) 490
BsuI GTATCC 2 cut(s) 129, 1480
BsuRI GGCC 5 cut(s) 185, 507, 944, 1478, 2064
BsuTUI ATCGAT 1 cut(s) 490
BtgI CCRYGG 1 cut(s) 198
BtsIMutI CAGTG 6 cut(s) 298, 675, 978, 1075, 2081, 2187
BveI ACCTGC 2 cut(s) 531, 2301
Cac8I GCNNGC 5 cut(s) 258, 262, 1233, 1524, 2055
CaiI CAGNNNCTG 1 cut(s) 850
CciI TCATGA 2 cut(s) 414, 2016
CfoI GCGC 2 cut(s) 876, 2253
Cfr13I GGNCC 3 cut(s) 183, 968, 2063
ClaI ATCGAT 1 cut(s) 490
CseI GACGC 1 cut(s) 1988
Csp6I GTAC 6 cut(s) 279, 734, 1091, 1097, 1623, 2217
CviAII CATG 9 cut(s) 199, 294, 415, 474, 1559, 1865, 1877, 1917, 2017
CviQI GTAC 6 cut(s) 279, 734, 1091, 1097, 1623, 2217
DpnI GATC 7 cut(s) 268, 585, 602, 820, 1128, 1549, 1823
DpnII GATC 7 cut(s) 266, 583, 600, 818, 1126, 1547, 1821
DraI TTTAAA 1 cut(s) 2116
EaeI YGGCCR 1 cut(s) 505
Eam1104I CTCTTC 5 cut(s) 384, 764, 974, 1709, 2281
EarI CTCTTC 5 cut(s) 384, 764, 974, 1709, 2281
EciI GGCGGA 1 cut(s) 566
Ecl136II GAGCTC 2 cut(s) 1045, 1795
Eco130I CCWWGG 4 cut(s) 186, 198, 436, 1473
Eco24I GRGCYC 3 cut(s) 866, 1047, 1797
Eco32I GATATC 1 cut(s) 748
Eco47I GGWCC 1 cut(s) 968
Eco53kI GAGCTC 2 cut(s) 1045, 1795
Eco57I CTGAAG 4 cut(s) 1233, 1289, 1922, 2414
Eco72I CACGTG 1 cut(s) 794
EcoICRI GAGCTC 2 cut(s) 1045, 1795
EcoO109I RGGNCCY 2 cut(s) 183, 2063
EcoRI GAATTC 1 cut(s) 2323
EcoRII CCWGG 6 cut(s) 111, 345, 425, 627, 711, 1414
EcoRV GATATC 1 cut(s) 748
EcoT14I CCWWGG 4 cut(s) 186, 198, 436, 1473
EcoT22I ATGCAT 1 cut(s) 1413
EcoT38I GRGCYC 3 cut(s) 866, 1047, 1797
ErhI CCWWGG 4 cut(s) 186, 198, 436, 1473
Esp3I CGTCTC 1 cut(s) 1032
FaeI CATG 9 cut(s) 202, 297, 418, 477, 1562, 1868, 1880, 1920, 2020
FaqI GGGAC 2 cut(s) 120, 2272
FatI CATG 9 cut(s) 198, 293, 414, 473, 1558, 1864, 1876, 1916, 2016
FauI CCCGC 2 cut(s) 1537, 2078
FauNDI CATATG 1 cut(s) 126
Fnu4HI GCNGC 6 cut(s) 534, 924, 1022, 1107, 1682, 2382
FriOI GRGCYC 3 cut(s) 866, 1047, 1797
Fsp4HI GCNGC 6 cut(s) 534, 924, 1022, 1107, 1682, 2382
FspBI CTAG 3 cut(s) 737, 1533, 2054
GlaI GCGC 2 cut(s) 875, 2252
GluI GCNGC 6 cut(s) 534, 924, 1022, 1107, 1682, 2382
GsuI CTGGAG 3 cut(s) 35, 2079, 2282
HaeII RGCGCY 1 cut(s) 877
HaeIII GGCC 5 cut(s) 185, 507, 944, 1478, 2064
HapII CCGG 1 cut(s) 166
HgaI GACGC 1 cut(s) 1988
HhaI GCGC 2 cut(s) 876, 2253
Hin1II CATG 9 cut(s) 202, 297, 418, 477, 1562, 1868, 1880, 1920, 2020
Hin6I GCGC 2 cut(s) 874, 2251
HinP1I GCGC 2 cut(s) 874, 2251
HincII GTYRAC 5 cut(s) 805, 1077, 1282, 1974, 2184
HindII GTYRAC 5 cut(s) 805, 1077, 1282, 1974, 2184
HindIII AAGCTT 2 cut(s) 69, 2022
HpaII CCGG 1 cut(s) 166
Hpy166II GTNNAC 6 cut(s) 805, 1077, 1282, 1974, 1981, 2184
Hpy188I TCNGA 7 cut(s) 136, 289, 846, 1801, 2124, 2314, 2394
Hpy8I GTNNAC 6 cut(s) 805, 1077, 1282, 1974, 1981, 2184
Hpy99I CGWCG 1 cut(s) 136
HpyCH4III ACNGT 6 cut(s) 283, 662, 1090, 1978, 2191, 2216
HpyCH4IV ACGT 3 cut(s) 178, 793, 2350
HpyF10VI GCNNNNNNNGC 7 cut(s) 16, 25, 1223, 1232, 1343, 2070, 2419
HpySE526I ACGT 3 cut(s) 178, 793, 2350
Hsp92II CATG 9 cut(s) 202, 297, 418, 477, 1562, 1868, 1880, 1920, 2020
HspAI GCGC 2 cut(s) 874, 2251
Kpn2I TCCGGA 1 cut(s) 165
Kzo9I GATC 7 cut(s) 266, 583, 600, 818, 1126, 1547, 1821
LguI GCTCTTC 2 cut(s) 384, 2281
LmnI GCTCC 7 cut(s) 16, 157, 168, 348, 869, 1342, 1915
Lsp1109I GCAGC 6 cut(s) 545, 935, 1008, 1093, 1693, 2393
LweI GCATC 5 cut(s) 556, 684, 1185, 1420, 1897
MaeI CTAG 3 cut(s) 737, 1533, 2054
MaeII ACGT 3 cut(s) 178, 793, 2350
MaeIII GTNAC 4 cut(s) 21, 496, 794, 1584
MalI GATC 7 cut(s) 268, 585, 602, 820, 1128, 1549, 1823
MbiI CCGCTC 1 cut(s) 152
MboI GATC 7 cut(s) 266, 583, 600, 818, 1126, 1547, 1821
MflI RGATCY 3 cut(s) 583, 1126, 1821
MhlI GDGCHC 3 cut(s) 866, 1047, 1797
MlsI TGGCCA 1 cut(s) 507
MluI ACGCGT 1 cut(s) 1997
MluNI TGGCCA 1 cut(s) 507
MlyI GAGTC 4 cut(s) 102, 698, 1072, 2251
MmeI TCCRAC 7 cut(s) 114, 312, 614, 891, 1597, 1849, 2330
Mox20I TGGCCA 1 cut(s) 507
Mph1103I ATGCAT 1 cut(s) 1413
MroI TCCGGA 1 cut(s) 165
MscI TGGCCA 1 cut(s) 507
MseI TTAA 4 cut(s) 1671, 2115, 2168, 2193
MslI CAYNNNNRTG 2 cut(s) 492, 2367
Msp20I TGGCCA 1 cut(s) 507
MspA1I CMGCKG 2 cut(s) 1544, 2162
MspI CCGG 1 cut(s) 166
MspR9I CCNGG 6 cut(s) 113, 347, 427, 629, 713, 1416
Mva1269I GAATGC 3 cut(s) 625, 1024, 1334
MvaI CCWGG 6 cut(s) 113, 347, 427, 629, 713, 1416
MvnI CGCG 1 cut(s) 1999
MwoI GCNNNNNNNGC 7 cut(s) 16, 25, 1223, 1232, 1343, 2070, 2419
NcoI CCATGG 1 cut(s) 198
NdeI CATATG 1 cut(s) 126
NdeII GATC 7 cut(s) 266, 583, 600, 818, 1126, 1547, 1821
NheI GCTAGC 1 cut(s) 2053
NlaIII CATG 9 cut(s) 202, 297, 418, 477, 1562, 1868, 1880, 1920, 2020
NlaIV GGNNCC 5 cut(s) 184, 865, 989, 1495, 1823
NmuCI GTSAC 2 cut(s) 794, 1584
NsiI ATGCAT 1 cut(s) 1413
NspI RCATGY 1 cut(s) 297
NspV TTCGAA 1 cut(s) 1690
PagI TCATGA 2 cut(s) 414, 2016
PaqCI CACCTGC 1 cut(s) 2301
PasI CCCWGGG 1 cut(s) 712
PciSI GCTCTTC 2 cut(s) 384, 2281
PctI GAATGC 3 cut(s) 625, 1024, 1334
PfoI TCCNGGA 1 cut(s) 345
PkrI GCNGC 6 cut(s) 535, 925, 1023, 1108, 1683, 2383
PleI GAGTC 4 cut(s) 102, 697, 1072, 2251
PmaCI CACGTG 1 cut(s) 794
PmlI CACGTG 1 cut(s) 794
PpsI GAGTC 4 cut(s) 102, 697, 1072, 2251
Ppu21I YACGTR 3 cut(s) 179, 794, 2351
PshBI ATTAAT 1 cut(s) 1671
Psp124BI GAGCTC 2 cut(s) 1047, 1797
Psp6I CCWGG 6 cut(s) 111, 345, 425, 627, 711, 1414
PspCI CACGTG 1 cut(s) 794
PspGI CCWGG 6 cut(s) 111, 345, 425, 627, 711, 1414
PspN4I GGNNCC 5 cut(s) 184, 865, 989, 1495, 1823
PspPI GGNCC 3 cut(s) 183, 968, 2063
PsrI GAACNNNNNNTAC 2 cut(s) 1486, 1518
PstI CTGCAG 3 cut(s) 266, 1683, 2383
PstNI CAGNNNCTG 1 cut(s) 850
PsuI RGATCY 3 cut(s) 583, 1126, 1821
PvuII CAGCTG 1 cut(s) 2162
RsaI GTAC 6 cut(s) 280, 735, 1092, 1098, 1624, 2218
RsaNI GTAC 6 cut(s) 279, 734, 1091, 1097, 1623, 2217
RseI CAYNNNNRTG 2 cut(s) 492, 2367
SacI GAGCTC 2 cut(s) 1047, 1797
SapI GCTCTTC 2 cut(s) 384, 2281
SaqAI TTAA 4 cut(s) 1671, 2115, 2168, 2193
SatI GCNGC 6 cut(s) 534, 924, 1022, 1107, 1682, 2382
Sau3AI GATC 7 cut(s) 266, 583, 600, 818, 1126, 1547, 1821
Sau96I GGNCC 3 cut(s) 183, 968, 2063
ScaI AGTACT 2 cut(s) 735, 1098
SchI GAGTC 4 cut(s) 102, 698, 1072, 2251
ScrFI CCNGG 6 cut(s) 113, 347, 427, 629, 713, 1416
SduI GDGCHC 3 cut(s) 866, 1047, 1797
SfaNI GCATC 5 cut(s) 556, 684, 1185, 1420, 1897
SfcI CTRYAG 3 cut(s) 262, 1679, 2379
SfuI TTCGAA 1 cut(s) 1690
SinI GGWCC 1 cut(s) 968
SmiMI CAYNNNNRTG 2 cut(s) 492, 2367
SmlI CTYRAG 2 cut(s) 1046, 1946
SmoI CTYRAG 2 cut(s) 1046, 1946
SpeI ACTAGT 1 cut(s) 736
SsiI CCGC 7 cut(s) 150, 238, 551, 834, 1544, 1652, 2071
SspI AATATT 1 cut(s) 685
SspMI CTAG 3 cut(s) 737, 1533, 2054
SstI GAGCTC 2 cut(s) 1047, 1797
StyD4I CCNGG 6 cut(s) 111, 345, 425, 627, 711, 1414
StyI CCWWGG 4 cut(s) 186, 198, 436, 1473
TaaI ACNGT 6 cut(s) 283, 662, 1090, 1978, 2191, 2216
TaiI ACGT 3 cut(s) 181, 796, 2353
TaqI TCGA 4 cut(s) 490, 692, 1146, 1690
TatI WGTACW 4 cut(s) 733, 1090, 1096, 1622
Tru1I TTAA 4 cut(s) 1671, 2115, 2168, 2193
Tru9I TTAA 4 cut(s) 1671, 2115, 2168, 2193
TscAI CASTG 6 cut(s) 305, 682, 978, 1075, 2088, 2194
TseFI GTSAC 2 cut(s) 794, 1584
TseI GCWGC 6 cut(s) 533, 923, 1021, 1106, 1681, 2381
Tsp45I GTSAC 2 cut(s) 794, 1584
TspDTI ATGAA 9 cut(s) 81, 384, 431, 476, 1386, 1498, 1547, 1881, 2033
TspGWI ACGGA 3 cut(s) 306, 904, 2024
TspRI CASTG 6 cut(s) 305, 682, 978, 1075, 2088, 2194
VpaK11BI GGWCC 1 cut(s) 968
VspI ATTAAT 1 cut(s) 1671
XapI RAATTY 5 cut(s) 85, 450, 1553, 2117, 2323
XceI RCATGY 1 cut(s) 297
XcmI CCANNNNNNNNNTGG 2 cut(s) 305, 544
XspI CTAG 3 cut(s) 737, 1533, 2054
ZrmI AGTACT 2 cut(s) 735, 1098
Zsp2I ATGCAT 1 cut(s) 1413
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.