RchiOBHm_Chr2g0091501

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0011157
Physical Location & Seq
Forward (+)
5170736 .. 5175164
4429 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46667

Sequence Viewer

Length: 2922 bp
ATGGCCCAGATTATCAGAGACAGAGTTTTCGGCTCCTTTGGTGGTTCCAGACGACACAACAGAGTCCCTATTCCAATTCCACAACCCGAACCCGAACCCGAACCCGAACGCGTCGTCATGCCCGTTTACCCGGTCGAAGACCTGCCCAACCCGTTCGGGGACTTGGGCCCGCATCTCTCGGACTCGGACCTCCGAGAAACCGTCTACGAGATCCTAGTCGGAGCCTGCCGGAGCTCCGGCCCGAAACCGCTCACCTACACCCCGCAGTCGGAGAAGATCACCGACCGGAATTCCCAGTCTTCTTCTTCTTCCTCCTCGCTGTCGTCACTTCAGAGGTCGCTGACGTCATCGGCGAAGAAGGCTCTGGGTTTGCAGCAAACGGCGTCGTCTAAGAGGCTCGGTGGGAGTAGTAAACGGTCCGGGTCGACCGATACCCGAATCAGGAGAGCCCTTCTCAGAGTTGCTGCTGGTCAGCTCGGACGAAAGATAGAGAGCATGGTTTTGCCTCTGGAGCTGTTACAGCATTTCAGGTCGTTAGATTTTGCGAATCAGCAGGAGTATGAAGCTTGGCAGAGGAGGAATTTGAAGGTTCTTGAAGTGGGACTCCTGGTGTATCCTCATATGCCGTCGGATAGAAAAGACACCGCTCCTCAACAGCTCCGGAAGATTATACGTGGGGCCTTGGAGAAACCCATGGAAACTGGAAAGAACACCGAGACAATGCAAGTTCTCCGCAGTCTTGTTATGTCGCTTGCCTGCAGATCGTTTGATGGTACTGTTTCCGACACATGCCACTGGGCAGATGGGTTTCCGTTGAATCTCAGGCTCTACCAAAAGCTCCTGGAATCGTGTTTTGACCTGAATGAAGAAACTTCTATTATTGAAGAGCTTGATGAGGTTTTAGAAGTCATGAAGAAGACCTGGGTAGTCCTTGGAATAAACCAAATTCTGCATAATCTGTGTTTTGCATGGGTTTTATTTCATCGATATGTTACAACTGGCCAAGTGGATAATGACCTGCTGTTTGCAGCCAATAACCTCTTGGCGGAAGTTCAGCAAGATGCCAATGCCACAAAAGATCCATCTTATTTGAAGATCGTAAGTTCAACATTGAATACAATACTGGGTTGGACTGAGAGAAGGCTTCTTGCCTACCGTGATGTTTTCAACGCTGGCAATATTGAGTCGATGCAAAACATTGTCTCCCTGGGGGTATTATCAGCAAAAGTACTAGTAGAGGATATCTCTCACGAGTATCGTAGGAAGAGAAAAGAAGTTGATGTGGCACGTGACAGGGTTGACACCTACATAAGATCATCAATACGCACTGCTTTTGCTCAGAAACTGGAAAAAGTGGGCTCCAACAAGCGCCTATCAAAGAGCCAAAATAATCGTATTCCTACCTTGTCCGTCCTTGCAACAGAAGTTAGCGAACTGGCCTTTAGTGAGAAAGATATATTTGGTCCAGTGTTGAAGAGATGGCACCCTTTTGCAACGGGTGTTGCTATGGCTACGCTGCATTCTTGCTATGGAGACAAGCTCAAGCAATTTGTGGATGGTATCAGTGAGTTGACTCCTGATACTGTACAAGTACTAAAAGCTGCTGACAAATTGGAGAAAGATATTGTGCAGATTGCTGTCGAAGATTCAGTAGATAGTGAGGATGGCGGGAAATCCATCATACAGGAGATGCCTCCTTATGAGGCTGAAGCTGTAATGGCTGAGCTTGCGAAGGCTTGGATAAGGACAAGATTGGACAGGCTGAAGGAATGGGTTGACAGAAATCTGCAACAAGAGGTCTGGAATCCACAAGCGAACAAAGAACGCTTTGCTCCTTCTGCCATTGAAGTTTTACGCATTGTAGATGAAACATTGGAAGCATTCTTTATGTTGCCTATACCAATGCATCCTGGCTTGATTCCAGAATTGAAGACTGGTCTTGATAGATGTCTTCAATACTATGTATCGAAAGCCAAGACTGGCTGTGGAACCCGAATTACCTTCATTCCCACTTTGCCTGCTTTGACTAGATGTTCAGCGGGATCAAAATTTCATGGTGTATTCAAGAAGAAGGAAAGGTCACATATAAACCAGAGGAGGAAATCTCAGGTTGGAAGTACAAATGGGGATGGTTCATTTGGGATTCCGCAACTTTGTGTTCGCATTAATACTCTGCAGCATATTCGAATGGAGTTGGGAGTTTTTGAGAAGAGGATTGTTGCTCATCTTGGGAACTTGGAATCCACTCAAAAGGGAGATTTTGCGAATGGGATGGGCAAAATGTTTGAGCTCTCAGCACCTGCTTGTTTCGAAGGGATCCAACAACTTTGTGAGGCAACAGCTTACAAGGTTGTTTTCCATGAACTAAGTCATGTTCTTTGGGATGGCTTGTATAATGTGGATGCTCCCTCATGTAGAATTGAGCCATTTCTTCAGGAACTTGAGCAATTTTTGGAGATTATCTCGTCAACAGTTCACAACAGAGTTAGAACGCGTCTTATTACGGATGTCATGAAAGCTTCTTTTGATGGGTTCTTGTTGGTTTTGCTAGCTGGAGGCCCTTCCCGCAGTTTCACACTGAGAGATTCTAACATAATAGAGGAGGATTTTAAATTTCTGACTGATTTGTTCTGGTCAAACGGGGATGGATTACCAGCTGATTTAATAGCTAAGTTGTCAACCACTGTTAAGGACATCCTTCCTCTCTACCGTACTGAGACTGATAGCCTTATTGAAAAGTTCAAGCGCACGACTTTGGAGAACTATGGCTCTTCTGCGAAGTCCCACCTGCCATTGCCTCCAACTTCCGATGAGTGGAATTCCAATGACCCAAATACACTTCTACGTGTCTTATGTCATAGGAATGATGAGACTGCAGCCAAGTTTCTGAAGAAGACTTACAATTTGCCTAAAAAGCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

973

Amino Acids

109.5

Weight (kDa)

8.21

Isoelectric Point (pI)

49.92

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 574 - 972 8.2e-168 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20010 AT2G20010
fragaria_vesca FvH4_1g05840
malus_domestica MD02G1060400.v1.1 MD15G1193900.v1.1
prunus_persica Prupe.7G222400_v2.0.a1 Prupe.7G222400_v2.0.a1
pyrus_communis pycom02g04960 pycom15g17370
rosa_chinensis RchiOBHm_Chr2g0091501 RchiOBHm_Chr2g0091591
rosa_laevigata RLG00000016231
rosa_multiflora Rmu_sc0002407.1_g000007
rosa_roxburghii Rroxscaffold_2G00149980
rosa_rugosa Rorug02G0018300
rosa_samantha Rh2AG063500 Rh2BG062900 Rh2CG064600 Rh2DG063000
rosa_wichuraiana Rw2G005690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2308, 2796
AatII GACGTC 1 cut(s) 347
Acc36I ACCTGC 4 cut(s) 150, 1026, 2308, 2796
AccB1I GGYRCC 1 cut(s) 1482
AccBSI CCGCTC 2 cut(s) 250, 647
AccI GTMKAC 2 cut(s) 204, 425
AccII CGCG 2 cut(s) 111, 2494
AccIII TCCGGA 1 cut(s) 660
AclWI GGATC 5 cut(s) 205, 1073, 2050, 2311, 2324
AcoI YGGCCR 1 cut(s) 1000
AcsI RAATTY 6 cut(s) 289, 580, 945, 2048, 2612, 2818
AcuI CTGAAG 5 cut(s) 314, 1728, 1784, 2417, 2909
AcvI CACGTG 1 cut(s) 1289
AcyI GRCGYC 2 cut(s) 344, 383
AfaI GTAC 6 cut(s) 775, 1230, 1587, 1593, 2119, 2713
AfiI CCNNNNNNNGG 5 cut(s) 157, 268, 441, 1045, 2814
AflIII ACRYGT 3 cut(s) 109, 2492, 2845
AhlI ACTAGT 1 cut(s) 1231
AjnI CCWGG 5 cut(s) 606, 840, 920, 1206, 1909
AloI GAACNNNNNNTCC 2 cut(s) 2225, 2257
Alw21I GWGCWC 2 cut(s) 236, 2292
Alw26I GTCTC 6 cut(s) 12, 710, 1207, 1527, 2711, 2864
AlwI GGATC 5 cut(s) 205, 1073, 2050, 2311, 2324
AlwNI CAGNNNCTG 2 cut(s) 1345, 2300
Aor13HI TCCGGA 1 cut(s) 660
AoxI GGCC 7 cut(s) 3, 166, 238, 678, 1000, 1437, 2557
ApaI GGGCCC 1 cut(s) 170
ApeKI GCWGC 7 cut(s) 373, 464, 1028, 1516, 1601, 2176, 2876
ApoI RAATTY 6 cut(s) 289, 580, 945, 2048, 2612, 2818
ArsI GACNNNNNNTTYG 8 cut(s) 11, 43, 99, 131, 1007, 1039, 2887, 2919
AseI ATTAAT 1 cut(s) 2166
AspLEI GCGC 2 cut(s) 1371, 2748
AspS9I GGNCC 9 cut(s) 4, 166, 167, 187, 239, 417, 678, 1463, 2558
AsuC2I CCSGG 2 cut(s) 131, 421
AsuHPI GGTGA 2 cut(s) 244, 271
AsuII TTCGAA 2 cut(s) 2185, 2310
AsuNHI GCTAGC 1 cut(s) 2548
AvaII GGWCC 3 cut(s) 187, 417, 1463
BaeGI GKGCMC 1 cut(s) 170
BalI TGGCCA 1 cut(s) 1002
BamHI GGATCC 1 cut(s) 2316
BanI GGYRCC 1 cut(s) 1482
BanII GRGCYC 5 cut(s) 170, 236, 451, 1361, 2292
BarI GAAGNNNNNNTAC 2 cut(s) 2882, 2914
BauI CACGAG 1 cut(s) 1250
BbrPI CACGTG 1 cut(s) 1289
BbsI GAAGAC 6 cut(s) 144, 291, 923, 1937, 1943, 2900
Bbv12I GWGCWC 2 cut(s) 236, 2292
BbvI GCAGC 7 cut(s) 385, 451, 1040, 1503, 1588, 2188, 2888
BceAI ACGGC 2 cut(s) 396, 610
BcgI CGANNNNNNTGC 2 cut(s) 2165, 2199
BciT130I CCWGG 5 cut(s) 608, 842, 922, 1208, 1911
BciVI GTATCC 1 cut(s) 624
BcnI CCSGG 2 cut(s) 131, 421
BcoDI GTCTC 6 cut(s) 12, 710, 1207, 1527, 2711, 2864
BcuI ACTAGT 1 cut(s) 1231
BfaI CTAG 4 cut(s) 215, 1232, 2028, 2549
BfmI CTRYAG 3 cut(s) 757, 2174, 2874
BfoI RGCGCY 1 cut(s) 1372
BfuAI ACCTGC 4 cut(s) 150, 1026, 2308, 2796
BfuI GTATCC 1 cut(s) 624
BisI GCNGC 7 cut(s) 374, 465, 1029, 1517, 1602, 2177, 2877
BlpI GCTNAGC 1 cut(s) 1722
BlsI GCNGC 7 cut(s) 375, 466, 1030, 1518, 1603, 2178, 2878
BmcAI AGTACT 2 cut(s) 1230, 1593
Bme1390I CCNGG 7 cut(s) 131, 421, 608, 842, 922, 1208, 1911
Bme18I GGWCC 3 cut(s) 187, 417, 1463
BmgT120I GGNCC 9 cut(s) 4, 166, 167, 187, 239, 417, 678, 1463, 2558
BmiI GGNNCC 9 cut(s) 34, 46, 168, 223, 679, 1360, 1484, 1990, 2318
BmrFI CCNGG 7 cut(s) 131, 421, 608, 842, 922, 1208, 1911
BmrI ACTGGG 3 cut(s) 289, 805, 1133
BmsI GCATC 6 cut(s) 181, 1051, 1179, 1680, 1915, 2392
BmtI GCTAGC 1 cut(s) 2552
BmuI ACTGGG 3 cut(s) 289, 805, 1133
BpiI GAAGAC 6 cut(s) 144, 291, 923, 1937, 1943, 2900
BpmI CTGGAG 2 cut(s) 530, 2574
Bpu1102I GCTNAGC 1 cut(s) 1722
Bpu14I TTCGAA 2 cut(s) 2185, 2310
BpuEI CTTGAG 2 cut(s) 1526, 2462
BpuMI CCSGG 2 cut(s) 131, 421
Bsa29I ATCGAT 1 cut(s) 985
BsaAI YACGTR 3 cut(s) 674, 1289, 2846
BsaHI GRCGYC 2 cut(s) 344, 383
BsaJI CCNNGG 6 cut(s) 681, 693, 921, 931, 1206, 1207
BsaWI WCCGGW 2 cut(s) 285, 660
BsaXI ACNNNNNCTCC 2 cut(s) 1187, 1217
Bsc4I CCNNNNNNNGG 5 cut(s) 157, 268, 441, 1045, 2814
Bse3DI GCAATG 1 cut(s) 2792
BseAI TCCGGA 1 cut(s) 660
BseBI CCWGG 5 cut(s) 608, 842, 922, 1208, 1911
BseCI ATCGAT 1 cut(s) 985
BseDI CCNNGG 6 cut(s) 681, 693, 921, 931, 1206, 1207
BseLI CCNNNNNNNGG 5 cut(s) 157, 268, 441, 1045, 2814
BseMI GCAATG 1 cut(s) 2792
BseMII CTCAG 9 cut(s) 469, 835, 1125, 1352, 1713, 2120, 2307, 2570, 2706
BseRI GAGGAG 5 cut(s) 304, 589, 639, 2110, 2615
BseSI GKGCMC 1 cut(s) 170
BseXI GCAGC 7 cut(s) 385, 451, 1040, 1503, 1588, 2188, 2888
BsgI GTGCAG 1 cut(s) 1649
Bsh1236I CGCG 2 cut(s) 111, 2494
Bsh1285I CGRYCG 3 cut(s) 135, 286, 429
BshFI GGCC 7 cut(s) 5, 168, 240, 680, 1002, 1439, 2559
BshNI GGYRCC 1 cut(s) 1482
BshVI ATCGAT 1 cut(s) 985
BsiEI CGRYCG 3 cut(s) 135, 286, 429
BsiHKAI GWGCWC 2 cut(s) 236, 2292
BsiSI CCGG 6 cut(s) 131, 229, 237, 286, 420, 661
BslFI GGGAC 4 cut(s) 50, 173, 615, 2767
BslI CCNNNNNNNGG 5 cut(s) 157, 268, 441, 1045, 2814
BsmAI GTCTC 6 cut(s) 12, 710, 1207, 1527, 2711, 2864
BsmFI GGGAC 4 cut(s) 50, 173, 615, 2767
BsmI GAATGC 2 cut(s) 1519, 1880
BsnI GGCC 7 cut(s) 5, 168, 240, 680, 1002, 1439, 2559
Bsp119I TTCGAA 2 cut(s) 2185, 2310
Bsp120I GGGCCC 1 cut(s) 166
Bsp1286I GDGCHC 5 cut(s) 170, 236, 451, 1361, 2292
Bsp13I TCCGGA 1 cut(s) 660
Bsp1407I TGTACA 1 cut(s) 1585
Bsp143I GATC 8 cut(s) 210, 276, 761, 1078, 1095, 1313, 2042, 2316
Bsp1720I GCTNAGC 1 cut(s) 1722
Bsp19I CCATGG 1 cut(s) 693
BspANI GGCC 7 cut(s) 5, 168, 240, 680, 1002, 1439, 2559
BspCNI CTCAG 9 cut(s) 468, 834, 1126, 1351, 1714, 2119, 2306, 2571, 2707
BspDI ATCGAT 1 cut(s) 985
BspEI TCCGGA 1 cut(s) 660
BspFNI CGCG 2 cut(s) 111, 2494
BspHI TCATGA 2 cut(s) 909, 2511
BspLI GGNNCC 9 cut(s) 34, 46, 168, 223, 679, 1360, 1484, 1990, 2318
BspMAI CTGCAG 3 cut(s) 761, 2178, 2878
BspMI ACCTGC 4 cut(s) 150, 1026, 2308, 2796
BspOI GCTAGC 1 cut(s) 2552
BspPI GGATC 5 cut(s) 205, 1073, 2050, 2311, 2324
BspQI GCTCTTC 2 cut(s) 879, 2776
BspT104I TTCGAA 2 cut(s) 2185, 2310
BspT107I GGYRCC 1 cut(s) 1482
BsrBI CCGCTC 2 cut(s) 250, 647
BsrDI GCAATG 1 cut(s) 2792
BsrGI TGTACA 1 cut(s) 1585
BssECI CCNNGG 6 cut(s) 681, 693, 921, 931, 1206, 1207
BssMI GATC 8 cut(s) 210, 276, 761, 1078, 1095, 1313, 2042, 2316
BssNI GRCGYC 2 cut(s) 344, 383
BssSI CACGAG 1 cut(s) 1250
BssT1I CCWWGG 3 cut(s) 681, 693, 931
Bst2BI CACGAG 1 cut(s) 1250
Bst2UI CCWGG 5 cut(s) 608, 842, 922, 1208, 1911
Bst4CI ACNGT 8 cut(s) 202, 417, 778, 1157, 1585, 2473, 2686, 2711
Bst6I CTCTTC 5 cut(s) 879, 1259, 1469, 2204, 2776
BstACI GRCGYC 2 cut(s) 344, 383
BstAUI TGTACA 1 cut(s) 1585
BstBAI YACGTR 3 cut(s) 674, 1289, 2846
BstBI TTCGAA 2 cut(s) 2185, 2310
BstC8I GCNNGC 8 cut(s) 170, 226, 753, 757, 1174, 1728, 2019, 2550
BstDSI CCRYGG 1 cut(s) 693
BstFNI CGCG 2 cut(s) 111, 2494
BstH2I RGCGCY 1 cut(s) 1372
BstHHI GCGC 2 cut(s) 1371, 2748
BstKTI GATC 8 cut(s) 213, 279, 764, 1081, 1098, 1316, 2045, 2319
BstMAI GTCTC 6 cut(s) 12, 710, 1207, 1527, 2711, 2864
BstMBI GATC 8 cut(s) 210, 276, 761, 1078, 1095, 1313, 2042, 2316
BstMCI CGRYCG 3 cut(s) 135, 286, 429
BstMWI GCNNNNNNNGC 8 cut(s) 359, 511, 520, 1718, 1727, 1838, 2565, 2914
BstNI CCWGG 5 cut(s) 608, 842, 922, 1208, 1911
BstNSI RCATGY 1 cut(s) 792
BstSCI CCNGG 7 cut(s) 129, 419, 606, 840, 920, 1206, 1909
BstSFI CTRYAG 3 cut(s) 757, 2174, 2874
BstSLI GKGCMC 1 cut(s) 170
BstUI CGCG 2 cut(s) 111, 2494
BstV1I GCAGC 7 cut(s) 385, 451, 1040, 1503, 1588, 2188, 2888
BstV2I GAAGAC 6 cut(s) 144, 291, 923, 1937, 1943, 2900
BstX2I RGATCY 3 cut(s) 210, 1078, 2316
BstYI RGATCY 3 cut(s) 210, 1078, 2316
Bsu15I ATCGAT 1 cut(s) 985
BsuI GTATCC 1 cut(s) 624
BsuRI GGCC 7 cut(s) 5, 168, 240, 680, 1002, 1439, 2559
BsuTUI ATCGAT 1 cut(s) 985
BtgI CCRYGG 1 cut(s) 693
BtsI GCAGTG 1 cut(s) 1326
BtsIMutI CAGTG 6 cut(s) 793, 1326, 1473, 1570, 2576, 2682
BveI ACCTGC 4 cut(s) 150, 1026, 2308, 2796
Cac8I GCNNGC 8 cut(s) 170, 226, 753, 757, 1174, 1728, 2019, 2550
CaiI CAGNNNCTG 2 cut(s) 1345, 2300
CciI TCATGA 2 cut(s) 909, 2511
CfoI GCGC 2 cut(s) 1371, 2748
Cfr13I GGNCC 9 cut(s) 4, 166, 167, 187, 239, 417, 678, 1463, 2558
ClaI ATCGAT 1 cut(s) 985
CpoI CGGWCCG 1 cut(s) 417
CseI GACGC 3 cut(s) 100, 372, 2483
Csp6I GTAC 6 cut(s) 774, 1229, 1586, 1592, 2118, 2712
CspI CGGWCCG 1 cut(s) 417
CviQI GTAC 6 cut(s) 774, 1229, 1586, 1592, 2118, 2712
DpnI GATC 8 cut(s) 212, 278, 763, 1080, 1097, 1315, 2044, 2318
DpnII GATC 8 cut(s) 210, 276, 761, 1078, 1095, 1313, 2042, 2316
DraI TTTAAA 1 cut(s) 2611
EaeI YGGCCR 1 cut(s) 1000
Eam1104I CTCTTC 5 cut(s) 879, 1259, 1469, 2204, 2776
EarI CTCTTC 5 cut(s) 879, 1259, 1469, 2204, 2776
EciI GGCGGA 1 cut(s) 1061
Ecl136II GAGCTC 2 cut(s) 234, 2290
Eco130I CCWWGG 3 cut(s) 681, 693, 931
Eco24I GRGCYC 5 cut(s) 170, 236, 451, 1361, 2292
Eco32I GATATC 1 cut(s) 1243
Eco47I GGWCC 3 cut(s) 187, 417, 1463
Eco53kI GAGCTC 2 cut(s) 234, 2290
Eco57I CTGAAG 5 cut(s) 314, 1728, 1784, 2417, 2909
Eco72I CACGTG 1 cut(s) 1289
EcoICRI GAGCTC 2 cut(s) 234, 2290
EcoO109I RGGNCCY 2 cut(s) 678, 2558
EcoRI GAATTC 2 cut(s) 289, 2818
EcoRII CCWGG 5 cut(s) 606, 840, 920, 1206, 1909
EcoRV GATATC 1 cut(s) 1243
EcoT14I CCWWGG 3 cut(s) 681, 693, 931
EcoT22I ATGCAT 1 cut(s) 1908
EcoT38I GRGCYC 5 cut(s) 170, 236, 451, 1361, 2292
ErhI CCWWGG 3 cut(s) 681, 693, 931
FaqI GGGAC 4 cut(s) 50, 173, 615, 2767
FauI CCCGC 5 cut(s) 177, 270, 1661, 2032, 2573
FauNDI CATATG 1 cut(s) 621
FblI GTMKAC 2 cut(s) 204, 425
Fnu4HI GCNGC 7 cut(s) 374, 465, 1029, 1517, 1602, 2177, 2877
FriOI GRGCYC 5 cut(s) 170, 236, 451, 1361, 2292
Fsp4HI GCNGC 7 cut(s) 374, 465, 1029, 1517, 1602, 2177, 2877
FspBI CTAG 4 cut(s) 215, 1232, 2028, 2549
GlaI GCGC 2 cut(s) 1370, 2747
GluI GCNGC 7 cut(s) 374, 465, 1029, 1517, 1602, 2177, 2877
GsuI CTGGAG 2 cut(s) 530, 2574
HaeII RGCGCY 1 cut(s) 1372
HaeIII GGCC 7 cut(s) 5, 168, 240, 680, 1002, 1439, 2559
HapII CCGG 6 cut(s) 131, 229, 237, 286, 420, 661
HgaI GACGC 3 cut(s) 100, 372, 2483
HhaI GCGC 2 cut(s) 1371, 2748
Hin1I GRCGYC 2 cut(s) 344, 383
Hin6I GCGC 2 cut(s) 1369, 2746
HinP1I GCGC 2 cut(s) 1369, 2746
HincII GTYRAC 6 cut(s) 426, 1300, 1572, 1777, 2469, 2679
HindII GTYRAC 6 cut(s) 426, 1300, 1572, 1777, 2469, 2679
HindIII AAGCTT 2 cut(s) 564, 2517
HpaII CCGG 6 cut(s) 131, 229, 237, 286, 420, 661
HphI GGTGA 2 cut(s) 244, 271
Hpy99I CGWCG 3 cut(s) 116, 388, 631
HpyCH4III ACNGT 8 cut(s) 202, 417, 778, 1157, 1585, 2473, 2686, 2711
HpyCH4IV ACGT 4 cut(s) 344, 673, 1288, 2845
HpyF10VI GCNNNNNNNGC 8 cut(s) 359, 511, 520, 1718, 1727, 1838, 2565, 2914
HpySE526I ACGT 4 cut(s) 344, 673, 1288, 2845
Hsp92I GRCGYC 2 cut(s) 344, 383
HspAI GCGC 2 cut(s) 1369, 2746
Kpn2I TCCGGA 1 cut(s) 660
Kzo9I GATC 8 cut(s) 210, 276, 761, 1078, 1095, 1313, 2042, 2316
LguI GCTCTTC 2 cut(s) 879, 2776
Lsp1109I GCAGC 7 cut(s) 385, 451, 1040, 1503, 1588, 2188, 2888
LweI GCATC 6 cut(s) 181, 1051, 1179, 1680, 1915, 2392
MaeI CTAG 4 cut(s) 215, 1232, 2028, 2549
MaeII ACGT 4 cut(s) 344, 673, 1288, 2845
MaeIII GTNAC 5 cut(s) 324, 516, 991, 1289, 2079
MalI GATC 8 cut(s) 212, 278, 763, 1080, 1097, 1315, 2044, 2318
MbiI CCGCTC 2 cut(s) 250, 647
MboI GATC 8 cut(s) 210, 276, 761, 1078, 1095, 1313, 2042, 2316
MflI RGATCY 3 cut(s) 210, 1078, 2316
MhlI GDGCHC 5 cut(s) 170, 236, 451, 1361, 2292
MlsI TGGCCA 1 cut(s) 1002
MluI ACGCGT 2 cut(s) 109, 2492
MluNI TGGCCA 1 cut(s) 1002
MlyI GAGTC 5 cut(s) 72, 176, 597, 1193, 1567
MmeI TCCRAC 9 cut(s) 199, 249, 609, 807, 1109, 1386, 2092, 2344, 2825
Mox20I TGGCCA 1 cut(s) 1002
Mph1103I ATGCAT 1 cut(s) 1908
MroI TCCGGA 1 cut(s) 660
MscI TGGCCA 1 cut(s) 1002
MseI TTAA 4 cut(s) 2166, 2610, 2663, 2688
MslI CAYNNNNRTG 2 cut(s) 987, 2862
Msp20I TGGCCA 1 cut(s) 1002
MspA1I CMGCKG 2 cut(s) 2039, 2657
MspI CCGG 6 cut(s) 131, 229, 237, 286, 420, 661
MspR9I CCNGG 7 cut(s) 131, 421, 608, 842, 922, 1208, 1911
Mva1269I GAATGC 2 cut(s) 1519, 1880
MvaI CCWGG 5 cut(s) 608, 842, 922, 1208, 1911
MvnI CGCG 2 cut(s) 111, 2494
MwoI GCNNNNNNNGC 8 cut(s) 359, 511, 520, 1718, 1727, 1838, 2565, 2914
NciI CCSGG 2 cut(s) 131, 421
NcoI CCATGG 1 cut(s) 693
NdeI CATATG 1 cut(s) 621
NdeII GATC 8 cut(s) 210, 276, 761, 1078, 1095, 1313, 2042, 2316
NheI GCTAGC 1 cut(s) 2548
NlaIV GGNNCC 9 cut(s) 34, 46, 168, 223, 679, 1360, 1484, 1990, 2318
NmuCI GTSAC 3 cut(s) 324, 1289, 2079
NsiI ATGCAT 1 cut(s) 1908
NspI RCATGY 1 cut(s) 792
NspV TTCGAA 2 cut(s) 2185, 2310
PagI TCATGA 2 cut(s) 909, 2511
PaqCI CACCTGC 2 cut(s) 2308, 2796
PasI CCCWGGG 1 cut(s) 1207
PciSI GCTCTTC 2 cut(s) 879, 2776
PcsI WCGNNNNNNNCGW 2 cut(s) 120, 350
PctI GAATGC 2 cut(s) 1519, 1880
PfoI TCCNGGA 1 cut(s) 840
PkrI GCNGC 7 cut(s) 375, 466, 1030, 1518, 1603, 2178, 2878
PleI GAGTC 5 cut(s) 71, 176, 597, 1192, 1567
PmaCI CACGTG 1 cut(s) 1289
PmlI CACGTG 1 cut(s) 1289
PpsI GAGTC 5 cut(s) 71, 176, 597, 1192, 1567
Ppu21I YACGTR 3 cut(s) 674, 1289, 2846
PshBI ATTAAT 1 cut(s) 2166
Psp124BI GAGCTC 2 cut(s) 236, 2292
Psp6I CCWGG 5 cut(s) 606, 840, 920, 1206, 1909
PspCI CACGTG 1 cut(s) 1289
PspGI CCWGG 5 cut(s) 606, 840, 920, 1206, 1909
PspN4I GGNNCC 9 cut(s) 34, 46, 168, 223, 679, 1360, 1484, 1990, 2318
PspOMI GGGCCC 1 cut(s) 166
PspPI GGNCC 9 cut(s) 4, 166, 167, 187, 239, 417, 678, 1463, 2558
PsrI GAACNNNNNNTAC 2 cut(s) 1981, 2013
PstI CTGCAG 3 cut(s) 761, 2178, 2878
PstNI CAGNNNCTG 2 cut(s) 1345, 2300
PsuI RGATCY 3 cut(s) 210, 1078, 2316
PvuII CAGCTG 1 cut(s) 2657
RsaI GTAC 6 cut(s) 775, 1230, 1587, 1593, 2119, 2713
RsaNI GTAC 6 cut(s) 774, 1229, 1586, 1592, 2118, 2712
RseI CAYNNNNRTG 2 cut(s) 987, 2862
Rsr2I CGGWCCG 1 cut(s) 417
RsrII CGGWCCG 1 cut(s) 417
SacI GAGCTC 2 cut(s) 236, 2292
SalI GTCGAC 1 cut(s) 424
SapI GCTCTTC 2 cut(s) 879, 2776
SaqAI TTAA 4 cut(s) 2166, 2610, 2663, 2688
SatI GCNGC 7 cut(s) 374, 465, 1029, 1517, 1602, 2177, 2877
Sau3AI GATC 8 cut(s) 210, 276, 761, 1078, 1095, 1313, 2042, 2316
Sau96I GGNCC 9 cut(s) 4, 166, 167, 187, 239, 417, 678, 1463, 2558
ScaI AGTACT 2 cut(s) 1230, 1593
SchI GAGTC 5 cut(s) 72, 176, 597, 1193, 1567
ScrFI CCNGG 7 cut(s) 131, 421, 608, 842, 922, 1208, 1911
SduI GDGCHC 5 cut(s) 170, 236, 451, 1361, 2292
SfaNI GCATC 6 cut(s) 181, 1051, 1179, 1680, 1915, 2392
SfcI CTRYAG 3 cut(s) 757, 2174, 2874
SfuI TTCGAA 2 cut(s) 2185, 2310
SinI GGWCC 3 cut(s) 187, 417, 1463
SmiMI CAYNNNNRTG 2 cut(s) 987, 2862
SmlI CTYRAG 2 cut(s) 1541, 2441
SmoI CTYRAG 2 cut(s) 1541, 2441
SpeI ACTAGT 1 cut(s) 1231
SspI AATATT 1 cut(s) 1180
SspMI CTAG 4 cut(s) 215, 1232, 2028, 2549
SstI GAGCTC 2 cut(s) 236, 2292
StyD4I CCNGG 7 cut(s) 129, 419, 606, 840, 920, 1206, 1909
StyI CCWWGG 3 cut(s) 681, 693, 931
TaaI ACNGT 8 cut(s) 202, 417, 778, 1157, 1585, 2473, 2686, 2711
TaiI ACGT 4 cut(s) 347, 676, 1291, 2848
TaqI TCGA 8 cut(s) 135, 425, 985, 1187, 1641, 1967, 2185, 2310
TaqII GACCGA 1 cut(s) 443
TatI WGTACW 4 cut(s) 1228, 1585, 1591, 2117
Tru1I TTAA 4 cut(s) 2166, 2610, 2663, 2688
Tru9I TTAA 4 cut(s) 2166, 2610, 2663, 2688
TscAI CASTG 6 cut(s) 800, 1333, 1473, 1570, 2583, 2689
TseFI GTSAC 3 cut(s) 324, 1289, 2079
TseI GCWGC 7 cut(s) 373, 464, 1028, 1516, 1601, 2176, 2876
Tsp45I GTSAC 3 cut(s) 324, 1289, 2079
TspGWI ACGGA 3 cut(s) 801, 1399, 2519
TspRI CASTG 6 cut(s) 800, 1333, 1473, 1570, 2583, 2689
VpaK11BI GGWCC 3 cut(s) 187, 417, 1463
VspI ATTAAT 1 cut(s) 2166
XapI RAATTY 6 cut(s) 289, 580, 945, 2048, 2612, 2818
XceI RCATGY 1 cut(s) 792
XcmI CCANNNNNNNNNTGG 2 cut(s) 800, 1039
XmiI GTMKAC 2 cut(s) 204, 425
XspI CTAG 4 cut(s) 215, 1232, 2028, 2549
ZraI GACGTC 1 cut(s) 345
ZrmI AGTACT 2 cut(s) 1230, 1593
Zsp2I ATGCAT 1 cut(s) 1908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.