Rh2AG063500

Plant family of unknown function (DUF810)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
OG0011157
Physical Location & Seq
Forward (+)
5217755 .. 5221517
3763 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2AG063500.1

Sequence Viewer

Length: 2985 bp
ATGGCCCAGATTATCAGAGACAGAGTTTTCGGCTCCTTTGGTGGTTCCAGACGACACAACAGAGTCCCTATTCCAATTCCAATTCCACAACCCGAACCCGAACCCGAACCCGAACCCGAACCGGAGCGCGTCGTCATGCCCGTTTACCCGGTCGAAGACCTGCCCAACCCGTTCGGGGACTTGGGCCCGCATCTCTCGGACTCGGACCTCCGAGAAACCGTCTACGAGATCCTAGTCGGAGCCTGCCGGAGCTCCGGCCCGAAACCGCTCACCTACACCCCGCAGTCGGAGAAGATCACCGACCGGAATTCCCAGTCTTCTTCTTCTTCTTCTTCCTCGCTGTCGTCACTTCAGAGGTCGCTGACGTCATCGGCGAAGAAGGCTCTGGGTTTGCAGCAAACGGCGTCGTCTAAGAGGCTCGGTGGGAGTAGTAAACGGTCCGGGTCGGTTTTTGAGCTCATGCGGGTCCAGATGAGGGTTTCGGAGCAGACCGATACCCGAATCAGGAGAGCCCTTCTCAGAGTTGCTGCTGGTCAGCTCGGACGAAAGATAGAGAGCATGGTTTTGCCTCTGGAGCTGTTACAGCATTTCAGGTCGTTAGATTTTGCGAATCAGCAGGAGTATGAAGCTTGGCAGAGGAGGAATTTGAAGGTTCTTGAAGTGGGACTCCTGGTGTATCCTCATATGCCGTCGGATAGAAAAGACACCGCTCCTCAACAGCTCCGGAAGATTATACGTGGGGCCTTGGAGAAACCCATGGAAACTGGAAAGAACACCGAGACAATGCAAGTTCTCCGCAGTCTTGTTATGTCGCTTGCCTGCAGATCGTTTGATGGTACTGTTTCCGACACATGCCACTGGGCAGATGGGTTTCCGTTGAATCTCAGGCTCTACCAAAAGCTCCTGGAATCGTGTTTTGACCTGAATGAAGAAACTTCTATTATTGAAGAGCTTGATGAGGTTTTAGAAGTCATGAAGAAGACCTGGGTAGTCCTTGGAATAAACCAAATTCTGCATAATCTGTGTTTTGCATGGGTTTTATTTCATCGATATGTTACAACTGGCCAAGTGGATAATGACCTGCTGTTTGCAGCCAATAACCTCTTGGCGGAAGTTCAGCAAGATGCCAATGCCACAAAAGATCCATCTTATTTGAAGATCGTAAGTTCAACATTGAATACAATACTGGGTTGGACTGAGAGAAGGCTTCTTGCCTACCGTAATGTTTTCAACACTGGCAATATTGAGTCGATGCAAAACATTGTCTCCCTGGGGGTATTATCAGCAAAAGTACTAGTAGAGGATATCTCTCACGAATATCGTAGGAAGAGAAAAGAAGTTGATGTGGCACATGACAGGGTTGACACCTACATAAGATCATCAATACGCACCGCTTTTGCTCAGAAACTGGAAAAAGTGGGCTCCAACAAGCGCCTATCAAAGAGCCAAAAGAATCGTATTCCTACCTTGTCCGTCCTTGCAGCAGAAGTTAGCGAACTGGCCTTTAGTGAGAAAGATATATTTGGTCCAGTGTTGAAGAGATGGCACCCTTTTGCAACGGGAGTTGCTATGGCTACGCTGCATTCTTGCTATGGAGACGAGCTCAAGCAATTTGTGGATGGTATCAGTGAGTTGACTCCTGATACTGTACAAGTACTAAAAGCTGCTGACAAATTGGAGAAAGATCTTGTGCAGATTGCTGTCGAAGATTCAGTAGATAGTGAGGATGGCGGGAAATCCATCATACAGGAGATGCCTCCTTACGAGGCTGAAGCTGTAATGGCTGAGCTTGCGAAGGCTTGGATAAGGACAAGATTGGACAGGCTGAAGGAATGGGTTGACAGAAATCTGCAACAAGAGGTCTGGAATCCACAAGCGAACAAAGAATGCTTTGCTCCTTCTGCCATTGAAGTTTTACGCATTGTAGATGAAACATTGGAAGCATTTTTTATGTTGCCTATACCAATGCATCCTGGCTTGATTCCAGAATTGAAGACTGGTCTTGATAGATGTCTTCAATACTATGTATCCAAGGCCAAGACTGGCTGTGGAACCCGAATTACCTTCATTCCCACAATGCCTGCTTTGACTAGATGTTCAGCGGGATCAAAATTTCATGGTGTATTCAAGAAGAAGGAAAGGTCACATATAAACCAAAGGAGGAAATCTCAGGTTGGAAGTACAAATGGGGATGGTTCGTTTGGGATTCCGCAACTTTGTGTTCGCATTAATACTCTGCAGCGTATTCGAATGGAGTTGGGAGTTTTTGAGAAGAGGATTGTTGCTCATCTTGGGAACTTGGAATCCACTCAAAAGGGAGATTTTGCAAATGGGATGGGCAAAATGTTTGAGCTCTCAGCATCTGCTTGTTTAGAAGGGATCCAACAACTTTGTGAGGCAACAGCTTACAAGGTTGTTTTCCATGAACTAAGTCATGTTCTTTGGGATGGCCTGTATAATGTGGATGCTCCCTCATGTAGAATTGAGCCTTTTCTTCAGGAACTTGAGCAATTTTTGGAGATTATCTCGTCAACAGTTCACAACAGAGTTAGAACGCGTGTTATTACGGATGTCATGAAAGCTTCTTTTGACGGGTTCTTGTTGGTTTTGCTAGCTGGAGGCCCTTCCCGCAGTTTCACAGTGAGAGATTCTAACATAATAGAGGAGGATTTTAAATTTCTGACTGATTTGTTCTGGTCAAACGGGGATGGATTACCAGCTGATTTAATAGCTAAGTTGTCAACCACTGTTAAGGACATCCTTCCTCTCTACCGTACTGAGACTGATAGCCTTATTGAAAAGTTCAAGCGCACGACTCTGGAGAACTATGGCTCTTCTGCGAAGTCCCACCTGCCATTGCCTCCAACTTCCGATGAGTGGAATTCCAATGACCCAAATACACTTCTACGTGTCTTATGTCATAGGAATGATGAGACTGCAGCCAAGTTTCTGAAGAAGACTTACAATTTGCCTAAAAAGCTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF810

Protein Analysis

994

Amino Acids

111.89

Weight (kDa)

7.56

Isoelectric Point (pI)

50.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_PATROL1 PF25761 595 - 993 6.4e-168 PATROL1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011157)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G20010 AT2G20010
fragaria_vesca FvH4_1g05840
malus_domestica MD02G1060400.v1.1 MD15G1193900.v1.1
prunus_persica Prupe.7G222400_v2.0.a1 Prupe.7G222400_v2.0.a1
pyrus_communis pycom02g04960 pycom15g17370
rosa_chinensis RchiOBHm_Chr2g0091501 RchiOBHm_Chr2g0091591
rosa_laevigata RLG00000016231
rosa_multiflora Rmu_sc0002407.1_g000007
rosa_roxburghii Rroxscaffold_2G00149980
rosa_rugosa Rorug02G0018300
rosa_samantha Rh2AG063500 Rh2BG062900 Rh2CG064600 Rh2DG063000
rosa_wichuraiana Rw2G005690

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2859
AatII GACGTC 1 cut(s) 368
Acc36I ACCTGC 3 cut(s) 168, 1089, 2859
AccB1I GGYRCC 1 cut(s) 1545
AccBSI CCGCTC 2 cut(s) 268, 710
AccI GTMKAC 1 cut(s) 222
AccII CGCG 2 cut(s) 129, 2557
AccIII TCCGGA 1 cut(s) 723
AclWI GGATC 5 cut(s) 223, 1136, 2113, 2374, 2387
AcoI YGGCCR 1 cut(s) 1063
AcsI RAATTY 6 cut(s) 307, 643, 1008, 2111, 2675, 2881
AcuI CTGAAG 5 cut(s) 335, 1791, 1847, 2480, 2972
AcyI GRCGYC 2 cut(s) 365, 404
AfaI GTAC 6 cut(s) 838, 1293, 1650, 1656, 2182, 2776
AfiI CCNNNNNNNGG 6 cut(s) 175, 286, 475, 504, 1108, 2877
AflIII ACRYGT 2 cut(s) 2555, 2908
AhlI ACTAGT 1 cut(s) 1294
AjnI CCWGG 5 cut(s) 669, 903, 983, 1269, 1972
AloI GAACNNNNNNTCC 2 cut(s) 2288, 2320
Alw21I GWGCWC 4 cut(s) 254, 459, 1605, 2355
Alw26I GTCTC 6 cut(s) 12, 773, 1270, 1590, 2774, 2927
AlwI GGATC 5 cut(s) 223, 1136, 2113, 2374, 2387
AlwNI CAGNNNCTG 2 cut(s) 1408, 2363
Aor13HI TCCGGA 1 cut(s) 723
AoxI GGCC 9 cut(s) 3, 184, 256, 741, 1063, 1500, 2034, 2449, 2620
ApaI GGGCCC 1 cut(s) 188
ApeKI GCWGC 8 cut(s) 394, 527, 1091, 1481, 1579, 1664, 2239, 2939
ApoI RAATTY 6 cut(s) 307, 643, 1008, 2111, 2675, 2881
ArsI GACNNNNNNTTYG 6 cut(s) 11, 43, 1070, 1102, 2950, 2982
AseI ATTAAT 1 cut(s) 2229
AspLEI GCGC 3 cut(s) 129, 1434, 2811
AsuC2I CCSGG 2 cut(s) 149, 442
AsuHPI GGTGA 2 cut(s) 262, 289
AsuII TTCGAA 1 cut(s) 2248
AsuNHI GCTAGC 1 cut(s) 2611
AvaII GGWCC 4 cut(s) 205, 438, 466, 1526
BaeGI GKGCMC 1 cut(s) 188
BalI TGGCCA 1 cut(s) 1065
BamHI GGATCC 1 cut(s) 2379
BanI GGYRCC 1 cut(s) 1545
BanII GRGCYC 7 cut(s) 188, 254, 459, 514, 1424, 1605, 2355
BarI GAAGNNNNNNTAC 2 cut(s) 2945, 2977
BbsI GAAGAC 6 cut(s) 162, 309, 986, 2000, 2006, 2963
Bbv12I GWGCWC 4 cut(s) 254, 459, 1605, 2355
BbvI GCAGC 8 cut(s) 406, 514, 1103, 1493, 1566, 1651, 2251, 2951
BceAI ACGGC 2 cut(s) 417, 673
BcgI CGANNNNNNTGC 2 cut(s) 2228, 2262
BciT130I CCWGG 5 cut(s) 671, 905, 985, 1271, 1974
BciVI GTATCC 2 cut(s) 687, 2038
BcnI CCSGG 2 cut(s) 149, 442
BcoDI GTCTC 6 cut(s) 12, 773, 1270, 1590, 2774, 2927
BcuI ACTAGT 1 cut(s) 1294
BfaI CTAG 4 cut(s) 233, 1295, 2091, 2612
BfmI CTRYAG 3 cut(s) 820, 2237, 2937
BfoI RGCGCY 1 cut(s) 1435
BfuAI ACCTGC 3 cut(s) 168, 1089, 2859
BfuI GTATCC 2 cut(s) 687, 2038
BglII AGATCT 1 cut(s) 1684
BisI GCNGC 8 cut(s) 395, 528, 1092, 1482, 1580, 1665, 2240, 2940
BlpI GCTNAGC 1 cut(s) 1785
BlsI GCNGC 8 cut(s) 396, 529, 1093, 1483, 1581, 1666, 2241, 2941
BmcAI AGTACT 2 cut(s) 1293, 1656
Bme1390I CCNGG 7 cut(s) 149, 442, 671, 905, 985, 1271, 1974
Bme18I GGWCC 4 cut(s) 205, 438, 466, 1526
BmrFI CCNGG 7 cut(s) 149, 442, 671, 905, 985, 1271, 1974
BmrI ACTGGG 3 cut(s) 307, 868, 1196
BmsI GCATC 7 cut(s) 199, 1114, 1242, 1743, 1978, 2369, 2455
BmtI GCTAGC 1 cut(s) 2615
BmuI ACTGGG 3 cut(s) 307, 868, 1196
BpiI GAAGAC 6 cut(s) 162, 309, 986, 2000, 2006, 2963
BpmI CTGGAG 3 cut(s) 593, 2637, 2840
Bpu1102I GCTNAGC 1 cut(s) 1785
Bpu14I TTCGAA 1 cut(s) 2248
BpuEI CTTGAG 2 cut(s) 1589, 2525
BpuMI CCSGG 2 cut(s) 149, 442
Bsa29I ATCGAT 1 cut(s) 1048
BsaAI YACGTR 2 cut(s) 737, 2909
BsaHI GRCGYC 2 cut(s) 365, 404
BsaJI CCNNGG 7 cut(s) 744, 756, 984, 994, 1269, 1270, 2031
BsaWI WCCGGW 3 cut(s) 121, 303, 723
BsaXI ACNNNNNCTCC 2 cut(s) 1250, 1280
Bsc4I CCNNNNNNNGG 6 cut(s) 175, 286, 475, 504, 1108, 2877
Bse3DI GCAATG 1 cut(s) 2855
BseAI TCCGGA 1 cut(s) 723
BseBI CCWGG 5 cut(s) 671, 905, 985, 1271, 1974
BseCI ATCGAT 1 cut(s) 1048
BseDI CCNNGG 7 cut(s) 744, 756, 984, 994, 1269, 1270, 2031
BseLI CCNNNNNNNGG 6 cut(s) 175, 286, 475, 504, 1108, 2877
BseMI GCAATG 1 cut(s) 2855
BseMII CTCAG 8 cut(s) 532, 898, 1188, 1415, 1776, 2183, 2370, 2769
BseRI GAGGAG 3 cut(s) 652, 702, 2678
BseSI GKGCMC 1 cut(s) 188
BseXI GCAGC 8 cut(s) 406, 514, 1103, 1493, 1566, 1651, 2251, 2951
BsgI GTGCAG 1 cut(s) 1712
Bsh1236I CGCG 2 cut(s) 129, 2557
Bsh1285I CGRYCG 2 cut(s) 153, 304
BshFI GGCC 9 cut(s) 5, 186, 258, 743, 1065, 1502, 2036, 2451, 2622
BshNI GGYRCC 1 cut(s) 1545
BshVI ATCGAT 1 cut(s) 1048
BsiEI CGRYCG 2 cut(s) 153, 304
BsiHKAI GWGCWC 4 cut(s) 254, 459, 1605, 2355
BsiSI CCGG 7 cut(s) 122, 149, 247, 255, 304, 441, 724
BslFI GGGAC 4 cut(s) 50, 191, 678, 2830
BslI CCNNNNNNNGG 6 cut(s) 175, 286, 475, 504, 1108, 2877
BsmAI GTCTC 6 cut(s) 12, 773, 1270, 1590, 2774, 2927
BsmBI CGTCTC 1 cut(s) 1590
BsmFI GGGAC 4 cut(s) 50, 191, 678, 2830
BsmI GAATGC 2 cut(s) 1582, 1892
BsnI GGCC 9 cut(s) 5, 186, 258, 743, 1065, 1502, 2036, 2451, 2622
Bsp119I TTCGAA 1 cut(s) 2248
Bsp120I GGGCCC 1 cut(s) 184
Bsp1286I GDGCHC 7 cut(s) 188, 254, 459, 514, 1424, 1605, 2355
Bsp13I TCCGGA 1 cut(s) 723
Bsp1407I TGTACA 1 cut(s) 1648
Bsp143I GATC 9 cut(s) 228, 294, 824, 1141, 1158, 1376, 1684, 2105, 2379
Bsp1720I GCTNAGC 1 cut(s) 1785
Bsp19I CCATGG 1 cut(s) 756
BspANI GGCC 9 cut(s) 5, 186, 258, 743, 1065, 1502, 2036, 2451, 2622
BspCNI CTCAG 8 cut(s) 531, 897, 1189, 1414, 1777, 2182, 2369, 2770
BspDI ATCGAT 1 cut(s) 1048
BspEI TCCGGA 1 cut(s) 723
BspFNI CGCG 2 cut(s) 129, 2557
BspHI TCATGA 2 cut(s) 972, 2574
BspMAI CTGCAG 3 cut(s) 824, 2241, 2941
BspMI ACCTGC 3 cut(s) 168, 1089, 2859
BspOI GCTAGC 1 cut(s) 2615
BspPI GGATC 5 cut(s) 223, 1136, 2113, 2374, 2387
BspQI GCTCTTC 2 cut(s) 942, 2839
BspT104I TTCGAA 1 cut(s) 2248
BspT107I GGYRCC 1 cut(s) 1545
BsrBI CCGCTC 2 cut(s) 268, 710
BsrDI GCAATG 1 cut(s) 2855
BsrGI TGTACA 1 cut(s) 1648
BssECI CCNNGG 7 cut(s) 744, 756, 984, 994, 1269, 1270, 2031
BssMI GATC 9 cut(s) 228, 294, 824, 1141, 1158, 1376, 1684, 2105, 2379
BssNI GRCGYC 2 cut(s) 365, 404
BssT1I CCWWGG 4 cut(s) 744, 756, 994, 2031
Bst2UI CCWGG 5 cut(s) 671, 905, 985, 1271, 1974
Bst4CI ACNGT 9 cut(s) 220, 438, 841, 1220, 1648, 2536, 2641, 2749, 2774
Bst6I CTCTTC 5 cut(s) 942, 1322, 1532, 2267, 2839
BstACI GRCGYC 2 cut(s) 365, 404
BstAUI TGTACA 1 cut(s) 1648
BstBAI YACGTR 2 cut(s) 737, 2909
BstBI TTCGAA 1 cut(s) 2248
BstC8I GCNNGC 7 cut(s) 188, 244, 816, 820, 1791, 2082, 2613
BstDSI CCRYGG 1 cut(s) 756
BstFNI CGCG 2 cut(s) 129, 2557
BstH2I RGCGCY 1 cut(s) 1435
BstHHI GCGC 3 cut(s) 129, 1434, 2811
BstKTI GATC 9 cut(s) 231, 297, 827, 1144, 1161, 1379, 1687, 2108, 2382
BstMAI GTCTC 6 cut(s) 12, 773, 1270, 1590, 2774, 2927
BstMBI GATC 9 cut(s) 228, 294, 824, 1141, 1158, 1376, 1684, 2105, 2379
BstMCI CGRYCG 2 cut(s) 153, 304
BstMWI GCNNNNNNNGC 8 cut(s) 380, 574, 583, 1781, 1790, 1901, 2628, 2977
BstNI CCWGG 5 cut(s) 671, 905, 985, 1271, 1974
BstNSI RCATGY 1 cut(s) 855
BstSCI CCNGG 7 cut(s) 147, 440, 669, 903, 983, 1269, 1972
BstSFI CTRYAG 3 cut(s) 820, 2237, 2937
BstSLI GKGCMC 1 cut(s) 188
BstUI CGCG 2 cut(s) 129, 2557
BstV1I GCAGC 8 cut(s) 406, 514, 1103, 1493, 1566, 1651, 2251, 2951
BstV2I GAAGAC 6 cut(s) 162, 309, 986, 2000, 2006, 2963
BstX2I RGATCY 4 cut(s) 228, 1141, 1684, 2379
BstYI RGATCY 4 cut(s) 228, 1141, 1684, 2379
Bsu15I ATCGAT 1 cut(s) 1048
BsuI GTATCC 2 cut(s) 687, 2038
BsuRI GGCC 9 cut(s) 5, 186, 258, 743, 1065, 1502, 2036, 2451, 2622
BsuTUI ATCGAT 1 cut(s) 1048
BtgI CCRYGG 1 cut(s) 756
BtsIMutI CAGTG 6 cut(s) 856, 1233, 1536, 1633, 2646, 2745
BveI ACCTGC 3 cut(s) 168, 1089, 2859
Cac8I GCNNGC 7 cut(s) 188, 244, 816, 820, 1791, 2082, 2613
CaiI CAGNNNCTG 2 cut(s) 1408, 2363
CciI TCATGA 2 cut(s) 972, 2574
CfoI GCGC 3 cut(s) 129, 1434, 2811
ClaI ATCGAT 1 cut(s) 1048
CpoI CGGWCCG 1 cut(s) 438
CseI GACGC 2 cut(s) 118, 393
Csp6I GTAC 6 cut(s) 837, 1292, 1649, 1655, 2181, 2775
CspI CGGWCCG 1 cut(s) 438
CviQI GTAC 6 cut(s) 837, 1292, 1649, 1655, 2181, 2775
DpnI GATC 9 cut(s) 230, 296, 826, 1143, 1160, 1378, 1686, 2107, 2381
DpnII GATC 9 cut(s) 228, 294, 824, 1141, 1158, 1376, 1684, 2105, 2379
DraI TTTAAA 1 cut(s) 2674
EaeI YGGCCR 1 cut(s) 1063
Eam1104I CTCTTC 5 cut(s) 942, 1322, 1532, 2267, 2839
EarI CTCTTC 5 cut(s) 942, 1322, 1532, 2267, 2839
EciI GGCGGA 1 cut(s) 1124
Ecl136II GAGCTC 4 cut(s) 252, 457, 1603, 2353
Eco130I CCWWGG 4 cut(s) 744, 756, 994, 2031
Eco24I GRGCYC 7 cut(s) 188, 254, 459, 514, 1424, 1605, 2355
Eco32I GATATC 1 cut(s) 1306
Eco47I GGWCC 4 cut(s) 205, 438, 466, 1526
Eco53kI GAGCTC 4 cut(s) 252, 457, 1603, 2353
Eco57I CTGAAG 5 cut(s) 335, 1791, 1847, 2480, 2972
EcoICRI GAGCTC 4 cut(s) 252, 457, 1603, 2353
EcoO109I RGGNCCY 2 cut(s) 741, 2621
EcoRI GAATTC 2 cut(s) 307, 2881
EcoRII CCWGG 5 cut(s) 669, 903, 983, 1269, 1972
EcoRV GATATC 1 cut(s) 1306
EcoT14I CCWWGG 4 cut(s) 744, 756, 994, 2031
EcoT22I ATGCAT 1 cut(s) 1971
EcoT38I GRGCYC 7 cut(s) 188, 254, 459, 514, 1424, 1605, 2355
ErhI CCWWGG 4 cut(s) 744, 756, 994, 2031
Esp3I CGTCTC 1 cut(s) 1590
FaqI GGGAC 4 cut(s) 50, 191, 678, 2830
FauI CCCGC 6 cut(s) 195, 288, 456, 1724, 2095, 2636
FauNDI CATATG 1 cut(s) 684
FblI GTMKAC 1 cut(s) 222
Fnu4HI GCNGC 8 cut(s) 395, 528, 1092, 1482, 1580, 1665, 2240, 2940
FriOI GRGCYC 7 cut(s) 188, 254, 459, 514, 1424, 1605, 2355
Fsp4HI GCNGC 8 cut(s) 395, 528, 1092, 1482, 1580, 1665, 2240, 2940
FspBI CTAG 4 cut(s) 233, 1295, 2091, 2612
GlaI GCGC 3 cut(s) 128, 1433, 2810
GluI GCNGC 8 cut(s) 395, 528, 1092, 1482, 1580, 1665, 2240, 2940
GsuI CTGGAG 3 cut(s) 593, 2637, 2840
HaeII RGCGCY 1 cut(s) 1435
HaeIII GGCC 9 cut(s) 5, 186, 258, 743, 1065, 1502, 2036, 2451, 2622
HapII CCGG 7 cut(s) 122, 149, 247, 255, 304, 441, 724
HgaI GACGC 2 cut(s) 118, 393
HhaI GCGC 3 cut(s) 129, 1434, 2811
Hin1I GRCGYC 2 cut(s) 365, 404
Hin6I GCGC 3 cut(s) 127, 1432, 2809
HinP1I GCGC 3 cut(s) 127, 1432, 2809
HincII GTYRAC 5 cut(s) 1363, 1635, 1840, 2532, 2742
HindII GTYRAC 5 cut(s) 1363, 1635, 1840, 2532, 2742
HindIII AAGCTT 2 cut(s) 627, 2580
HpaII CCGG 7 cut(s) 122, 149, 247, 255, 304, 441, 724
HphI GGTGA 2 cut(s) 262, 289
Hpy166II GTNNAC 9 cut(s) 145, 223, 434, 1363, 1635, 1840, 2532, 2539, 2742
Hpy8I GTNNAC 9 cut(s) 145, 223, 434, 1363, 1635, 1840, 2532, 2539, 2742
Hpy99I CGWCG 3 cut(s) 134, 409, 694
HpyCH4III ACNGT 9 cut(s) 220, 438, 841, 1220, 1648, 2536, 2641, 2749, 2774
HpyCH4IV ACGT 3 cut(s) 365, 736, 2908
HpyF10VI GCNNNNNNNGC 8 cut(s) 380, 574, 583, 1781, 1790, 1901, 2628, 2977
HpySE526I ACGT 3 cut(s) 365, 736, 2908
Hsp92I GRCGYC 2 cut(s) 365, 404
HspAI GCGC 3 cut(s) 127, 1432, 2809
Kpn2I TCCGGA 1 cut(s) 723
Kzo9I GATC 9 cut(s) 228, 294, 824, 1141, 1158, 1376, 1684, 2105, 2379
LguI GCTCTTC 2 cut(s) 942, 2839
Lsp1109I GCAGC 8 cut(s) 406, 514, 1103, 1493, 1566, 1651, 2251, 2951
LweI GCATC 7 cut(s) 199, 1114, 1242, 1743, 1978, 2369, 2455
MaeI CTAG 4 cut(s) 233, 1295, 2091, 2612
MaeII ACGT 3 cut(s) 365, 736, 2908
MaeIII GTNAC 4 cut(s) 345, 579, 1054, 2142
MalI GATC 9 cut(s) 230, 296, 826, 1143, 1160, 1378, 1686, 2107, 2381
MbiI CCGCTC 2 cut(s) 268, 710
MboI GATC 9 cut(s) 228, 294, 824, 1141, 1158, 1376, 1684, 2105, 2379
MflI RGATCY 4 cut(s) 228, 1141, 1684, 2379
MhlI GDGCHC 7 cut(s) 188, 254, 459, 514, 1424, 1605, 2355
MlsI TGGCCA 1 cut(s) 1065
MluI ACGCGT 1 cut(s) 2555
MluNI TGGCCA 1 cut(s) 1065
MlyI GAGTC 6 cut(s) 72, 194, 660, 1256, 1630, 2809
MmeI TCCRAC 9 cut(s) 217, 267, 672, 870, 1172, 1449, 2155, 2407, 2888
Mox20I TGGCCA 1 cut(s) 1065
Mph1103I ATGCAT 1 cut(s) 1971
MroI TCCGGA 1 cut(s) 723
MscI TGGCCA 1 cut(s) 1065
MseI TTAA 4 cut(s) 2229, 2673, 2726, 2751
MslI CAYNNNNRTG 2 cut(s) 1050, 2925
Msp20I TGGCCA 1 cut(s) 1065
MspA1I CMGCKG 2 cut(s) 2102, 2720
MspI CCGG 7 cut(s) 122, 149, 247, 255, 304, 441, 724
MspR9I CCNGG 7 cut(s) 149, 442, 671, 905, 985, 1271, 1974
Mva1269I GAATGC 2 cut(s) 1582, 1892
MvaI CCWGG 5 cut(s) 671, 905, 985, 1271, 1974
MvnI CGCG 2 cut(s) 129, 2557
MwoI GCNNNNNNNGC 8 cut(s) 380, 574, 583, 1781, 1790, 1901, 2628, 2977
NciI CCSGG 2 cut(s) 149, 442
NcoI CCATGG 1 cut(s) 756
NdeI CATATG 1 cut(s) 684
NdeII GATC 9 cut(s) 228, 294, 824, 1141, 1158, 1376, 1684, 2105, 2379
NheI GCTAGC 1 cut(s) 2611
NmuCI GTSAC 2 cut(s) 345, 2142
NsiI ATGCAT 1 cut(s) 1971
NspI RCATGY 1 cut(s) 855
NspV TTCGAA 1 cut(s) 2248
PagI TCATGA 2 cut(s) 972, 2574
PaqCI CACCTGC 1 cut(s) 2859
PasI CCCWGGG 1 cut(s) 1270
PciSI GCTCTTC 2 cut(s) 942, 2839
PcsI WCGNNNNNNNCGW 2 cut(s) 138, 371
PctI GAATGC 2 cut(s) 1582, 1892
PfoI TCCNGGA 1 cut(s) 903
PkrI GCNGC 8 cut(s) 396, 529, 1093, 1483, 1581, 1666, 2241, 2941
PleI GAGTC 6 cut(s) 71, 194, 660, 1255, 1630, 2809
PpsI GAGTC 6 cut(s) 71, 194, 660, 1255, 1630, 2809
Ppu21I YACGTR 2 cut(s) 737, 2909
PshBI ATTAAT 1 cut(s) 2229
Psp124BI GAGCTC 4 cut(s) 254, 459, 1605, 2355
Psp6I CCWGG 5 cut(s) 669, 903, 983, 1269, 1972
PspGI CCWGG 5 cut(s) 669, 903, 983, 1269, 1972
PspOMI GGGCCC 1 cut(s) 184
PsrI GAACNNNNNNTAC 2 cut(s) 2044, 2076
PstI CTGCAG 3 cut(s) 824, 2241, 2941
PstNI CAGNNNCTG 2 cut(s) 1408, 2363
PsuI RGATCY 4 cut(s) 228, 1141, 1684, 2379
PvuII CAGCTG 1 cut(s) 2720
RsaI GTAC 6 cut(s) 838, 1293, 1650, 1656, 2182, 2776
RsaNI GTAC 6 cut(s) 837, 1292, 1649, 1655, 2181, 2775
RseI CAYNNNNRTG 2 cut(s) 1050, 2925
Rsr2I CGGWCCG 1 cut(s) 438
RsrII CGGWCCG 1 cut(s) 438
SacI GAGCTC 4 cut(s) 254, 459, 1605, 2355
SapI GCTCTTC 2 cut(s) 942, 2839
SaqAI TTAA 4 cut(s) 2229, 2673, 2726, 2751
SatI GCNGC 8 cut(s) 395, 528, 1092, 1482, 1580, 1665, 2240, 2940
Sau3AI GATC 9 cut(s) 228, 294, 824, 1141, 1158, 1376, 1684, 2105, 2379
ScaI AGTACT 2 cut(s) 1293, 1656
SchI GAGTC 6 cut(s) 72, 194, 660, 1256, 1630, 2809
ScrFI CCNGG 7 cut(s) 149, 442, 671, 905, 985, 1271, 1974
SduI GDGCHC 7 cut(s) 188, 254, 459, 514, 1424, 1605, 2355
SfaNI GCATC 7 cut(s) 199, 1114, 1242, 1743, 1978, 2369, 2455
SfcI CTRYAG 3 cut(s) 820, 2237, 2937
SfuI TTCGAA 1 cut(s) 2248
SinI GGWCC 4 cut(s) 205, 438, 466, 1526
SmiMI CAYNNNNRTG 2 cut(s) 1050, 2925
SmlI CTYRAG 2 cut(s) 1604, 2504
SmoI CTYRAG 2 cut(s) 1604, 2504
SpeI ACTAGT 1 cut(s) 1294
SspI AATATT 1 cut(s) 1243
SspMI CTAG 4 cut(s) 233, 1295, 2091, 2612
SstI GAGCTC 4 cut(s) 254, 459, 1605, 2355
StyD4I CCNGG 7 cut(s) 147, 440, 669, 903, 983, 1269, 1972
StyI CCWWGG 4 cut(s) 744, 756, 994, 2031
TaaI ACNGT 9 cut(s) 220, 438, 841, 1220, 1648, 2536, 2641, 2749, 2774
TaiI ACGT 3 cut(s) 368, 739, 2911
TaqI TCGA 5 cut(s) 153, 1048, 1250, 1704, 2248
TaqII GACCGA 1 cut(s) 506
TatI WGTACW 4 cut(s) 1291, 1648, 1654, 2180
Tru1I TTAA 4 cut(s) 2229, 2673, 2726, 2751
Tru9I TTAA 4 cut(s) 2229, 2673, 2726, 2751
TscAI CASTG 6 cut(s) 863, 1240, 1536, 1633, 2646, 2752
TseFI GTSAC 2 cut(s) 345, 2142
TseI GCWGC 8 cut(s) 394, 527, 1091, 1481, 1579, 1664, 2239, 2939
Tsp45I GTSAC 2 cut(s) 345, 2142
TspDTI ATGAA 9 cut(s) 639, 942, 989, 1034, 1944, 2056, 2105, 2439, 2591
TspGWI ACGGA 3 cut(s) 864, 1462, 2582
TspRI CASTG 6 cut(s) 863, 1240, 1536, 1633, 2646, 2752
VpaK11BI GGWCC 4 cut(s) 205, 438, 466, 1526
VspI ATTAAT 1 cut(s) 2229
XapI RAATTY 6 cut(s) 307, 643, 1008, 2111, 2675, 2881
XceI RCATGY 1 cut(s) 855
XcmI CCANNNNNNNNNTGG 2 cut(s) 863, 1102
XmiI GTMKAC 1 cut(s) 222
XspI CTAG 4 cut(s) 233, 1295, 2091, 2612
ZraI GACGTC 1 cut(s) 366
ZrmI AGTACT 2 cut(s) 1293, 1656
Zsp2I ATGCAT 1 cut(s) 1971
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.