FvH4_1g07810

Regulatory protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0005113
Physical Location & Seq
Reverse (-)
4137661 .. 4139975
2315 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g07810.t1

Sequence Viewer

Length: 1788 bp
ATGTTCAAAAGTTCAGCTCTGGTACTCGCCATGGAATACACAAAAGGTTGTGTTTCTGATTCGAATGAGGTTGTTAGCAGTAGCATAAGTACTTTAGCTCATCACCACTCTCCCTCTTCTTCTTCACCTCCTCCTGATATCACATCCCTCAAACACCTCTCCAATAACCTCGAACTGATGGTTAACTCCTCTGACTTCGACTTCTTTGCCGACGCCAAAATCGTTGTCAGTAACGGCCGGGAAATCCACGTCCACCGCTGCATCCTCGCTGCGAGGAGCTCGTTTTTCAGGAATGTGTTCTCGGCGAAAGAAGGTAGTAGCTCTACCAGGTTTGAACTGAAGAACTTGGCAAAGGAATACGACGTCGGATTGGACTCTCTCCTAGCCGTTTTGGGTTACTTGTACAGTGGCAAGCTCAAGTCTTTGCCTAAAGGCGTTTGTGTCTGTGTAGACGACGCTTGTTCTCATGTGGCTTGTCGTCCTGTTGTTGATTTCATGGTGGAAGTTCTGTATGCTTCTTCAACATTTCAAATCTCAGAGCTGGTCACTCTCTACCAGAAGTGTCTGCTTGACATTCTTGAGAAAACAGCCATAGATGATGTGTTGGTGGTTCTGCATGTTGCGAATATGTGTGGCAAAGCTTGTGAGGGGTTGGTGCGGAGATGCATTGAGATGATAGTGAAGTCTGATGTTGATATTGTCACTCTTGAGAAAGCACTGCCTCAACAATCTGTGAAGCGAATCACCGATTCGAGGCTGGCCCTTGGCCTGGACAGTTCTCGGAGCAGTAATTCTCCGAGTAACTTTCCAGATAAGCACACAAGGAGGATACACAGGGCTCTGGATTCTGATGATGTTGAGTTGGTCCGAATGTTGTTGAAAGAGGGGCATACAAATCTTGATGAAGCATATGCACTTCACTATGCTGTGGCATACTGTGATGCAAAGACTACATATGAGTTGCTTGATCTTGGAATCGCGGATGTGAACTGCAGGAACCTAAGGGGTTACACCGTGCTGCACCTAGCAGCGGCGAGGAAGGAGCCTAAGATCATTGTGTCACTGCTTACAAAGGGTGCTCGTCCCTCGGATCTTACATTGGATGGCAGGAAAGCTCTTCAGATTACTAAGCGTCTTACAAGAGCTGCAGACTTTTTCAAGTCGAATGATGAGGGGAAGGCTTGTCCCAATGACCGGTTGTGTATAGAGATATTGGAGCAAGCAGAAAGGAGGGATCCATTGCTTGGAGAAGCTTCTCTTTCGCTTGCAATGGCCGGCGACGATCTGCGTATGAAACTCCTGTACCTTGAGAATAGAGTGGGACTTGCAAGGTACCTGTTTCCCATGGAAGCAAAGGTTGTACTAGGTATTACTCAACTTGACGAAACTCCAGCGTTTCCAGTAGCATGCCTGATCCGGAATAATCCCACCGGATCCCGGACAACGACAGTGGACTTGAACGAGGCACCCTTCAAGATTAAGGAAGAACACCTTGCCAGGCTTAGAGCACTATGCCAATCTGTGGAACTTGGGAAACGGTTCTTTCCTCGCTGTTCAGAAGTACTGAACAAGATCATGGATGGGGATGACATGTCACAGCTTATGTACACAGGCGATGACACTCCAGAAGTAAGGCTCACAAAGAGAAAAAGGTATATGGAAATCCAAGAAGTGCTAAGTAAGGCTTTTGATGAGGATAAACAGGATATTGATCGTTCTGGAATGTCATCATCATCCTCTTCTACATCAGTAAGAGCAGTGAGGCCTAAGCTCACCGTCATAGATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001666 GO:0002376 GO:0002682 GO:0002831 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009408 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009625 GO:0009627 GO:0009628 GO:0009682 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010033 GO:0010112 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031348 GO:0032101 GO:0032870 GO:0035690 GO:0036293 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044424 GO:0044464 GO:0045087 GO:0045088 GO:0045893 GO:0045935 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048585 GO:0050776 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070482 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0080027 GO:0080090 GO:0080134 GO:0098542 GO:1901698 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000022 GO:2000031 GO:2000112 GO:2001023 GO:2001038 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 BTB DUF3420 NPR1_like_C

Protein Analysis

596

Amino Acids

66.06

Weight (kDa)

6.56

Isoelectric Point (pI)

45.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BTB PF00651 65 - 142 5.2e-12 BTB/POZ domain
DUF3420 PF11900 230 - 278 4e-08 Domain of unknown function (DUF3420)
Ank_2 PF12796 277 - 362 3.8e-08 Ankyrin repeats (3 copies)
NPR1_like_C PF12313 377 - 582 2.5e-83 NPR1/NIM1 like defence protein C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 366
Acc65I GGTACC 1 cut(s) 1332
AccB1I GGYRCC 2 cut(s) 1332, 1465
AccB7I CCANNNNNTGG 2 cut(s) 1244, 1522
AccI GTMKAC 1 cut(s) 450
AccII CGCG 1 cut(s) 980
AccIII TCCGGA 1 cut(s) 1416
AciI CCGC 4 cut(s) 256, 658, 980, 1031
AclWI GGATC 6 cut(s) 1098, 1229, 1242, 1408, 1428, 1441
AcoI YGGCCR 2 cut(s) 235, 1272
AcuI CTGAAG 2 cut(s) 359, 1103
AcyI GRCGYC 2 cut(s) 213, 363
AfaI GTAC 8 cut(s) 24, 91, 404, 1304, 1334, 1362, 1563, 1607
AfiI CCNNNNNNNGG 7 cut(s) 753, 769, 1030, 1194, 1244, 1437, 1522
AflIII ACRYGT 1 cut(s) 1590
AgeI ACCGGT 1 cut(s) 1194
AgsI TTSAA 8 cut(s) 7, 335, 522, 530, 880, 1159, 1459, 1474
AjiI CACGTC 1 cut(s) 250
AjnI CCWGG 3 cut(s) 326, 768, 1496
Alw21I GWGCWC 3 cut(s) 281, 1081, 1510
AlwI GGATC 6 cut(s) 1098, 1229, 1242, 1408, 1428, 1441
Aor13HI TCCGGA 1 cut(s) 1416
AoxI GGCC 5 cut(s) 235, 759, 766, 1272, 1763
ApeKI GCWGC 5 cut(s) 258, 269, 1018, 1028, 1145
ArsI GACNNNNNNTTYG 2 cut(s) 210, 242
AsiGI ACCGGT 1 cut(s) 1194
Asp700I GAANNNNTTC 2 cut(s) 296, 1538
Asp718I GGTACC 1 cut(s) 1332
AspS9I GGNCC 2 cut(s) 760, 865
AsuC2I CCSGG 2 cut(s) 239, 1438
AsuHPI GGTGA 4 cut(s) 95, 117, 736, 1765
AsuII TTCGAA 1 cut(s) 62
AvaII GGWCC 1 cut(s) 865
AxyI CCTNAGG 1 cut(s) 1001
BaeI ACNNNNGTAYC 2 cut(s) 1286, 1319
BamHI GGATCC 2 cut(s) 1234, 1433
BanI GGYRCC 2 cut(s) 1332, 1465
BanII GRGCYC 2 cut(s) 281, 841
Bbv12I GWGCWC 3 cut(s) 281, 1081, 1510
BbvI GCAGC 5 cut(s) 245, 256, 1005, 1040, 1132
BccI CCATC 3 cut(s) 172, 1097, 1574
BceAI ACGGC 2 cut(s) 250, 371
BcgI CGANNNNNNTGC 2 cut(s) 188, 222
BciT130I CCWGG 3 cut(s) 328, 770, 1498
BciVI GTATCC 1 cut(s) 822
BcnI CCSGG 2 cut(s) 239, 1438
BfaI CTAG 3 cut(s) 383, 1025, 1364
BfmI CTRYAG 2 cut(s) 991, 1146
BfuI GTATCC 1 cut(s) 822
BisI GCNGC 6 cut(s) 259, 270, 1019, 1029, 1032, 1146
BlsI GCNGC 6 cut(s) 260, 271, 1020, 1030, 1033, 1147
BmcAI AGTACT 2 cut(s) 91, 1563
Bme1390I CCNGG 5 cut(s) 239, 328, 770, 1438, 1498
Bme18I GGWCC 1 cut(s) 865
BmgBI CACGTC 1 cut(s) 250
BmgT120I GGNCC 2 cut(s) 760, 865
BmiI GGNNCC 6 cut(s) 998, 1044, 1236, 1334, 1435, 1467
BmrFI CCNGG 5 cut(s) 239, 328, 770, 1438, 1498
BmsI GCATC 3 cut(s) 270, 653, 931
BpmI CTGGAG 2 cut(s) 1374, 1608
Bpu10I CCTNAGC 1 cut(s) 1767
Bpu14I TTCGAA 1 cut(s) 62
BpuEI CTTGAG 4 cut(s) 401, 599, 728, 1328
BpuMI CCSGG 2 cut(s) 239, 1438
BsaBI GATNNNNATC 1 cut(s) 1710
BsaHI GRCGYC 2 cut(s) 213, 363
BsaJI CCNNGG 4 cut(s) 30, 763, 1086, 1344
BsaWI WCCGGW 3 cut(s) 1194, 1416, 1430
Bsc4I CCNNNNNNNGG 7 cut(s) 753, 769, 1030, 1194, 1244, 1437, 1522
Bse118I RCCGGY 2 cut(s) 1194, 1274
Bse1I ACTGG 1 cut(s) 1400
Bse21I CCTNAGG 1 cut(s) 1001
Bse3DI GCAATG 2 cut(s) 1238, 1275
Bse8I GATNNNNATC 1 cut(s) 1710
BseAI TCCGGA 1 cut(s) 1416
BseBI CCWGG 3 cut(s) 328, 770, 1498
BseDI CCNNGG 4 cut(s) 30, 763, 1086, 1344
BseGI GGATG 7 cut(s) 143, 261, 988, 1108, 1585, 1591, 1733
BseJI GATNNNNATC 1 cut(s) 1710
BseLI CCNNNNNNNGG 7 cut(s) 753, 769, 1030, 1194, 1244, 1437, 1522
BseMI GCAATG 2 cut(s) 1238, 1275
BseMII CTCAG 1 cut(s) 549
BseNI ACTGG 1 cut(s) 1400
BseRI GAGGAG 3 cut(s) 120, 178, 289
BseX3I CGGCCG 1 cut(s) 235
BseXI GCAGC 5 cut(s) 245, 256, 1005, 1040, 1132
BsgI GTGCAG 1 cut(s) 1004
Bsh1236I CGCG 1 cut(s) 980
Bsh1285I CGRYCG 1 cut(s) 238
BshFI GGCC 5 cut(s) 237, 761, 768, 1274, 1765
BshNI GGYRCC 2 cut(s) 1332, 1465
BshTI ACCGGT 1 cut(s) 1194
BsiEI CGRYCG 1 cut(s) 238
BsiHKAI GWGCWC 3 cut(s) 281, 1081, 1510
BsiSI CCGG 6 cut(s) 238, 1195, 1275, 1417, 1431, 1438
BslFI GGGAC 3 cut(s) 1068, 1170, 1335
BslI CCNNNNNNNGG 7 cut(s) 753, 769, 1030, 1194, 1244, 1437, 1522
BsmFI GGGAC 3 cut(s) 1068, 1170, 1335
BsnI GGCC 5 cut(s) 237, 761, 768, 1274, 1765
Bsp119I TTCGAA 1 cut(s) 62
Bsp1286I GDGCHC 4 cut(s) 281, 841, 1081, 1510
Bsp13I TCCGGA 1 cut(s) 1416
Bsp1407I TGTACA 2 cut(s) 402, 1605
Bsp143I GATC 9 cut(s) 967, 1050, 1090, 1234, 1282, 1413, 1433, 1572, 1711
Bsp19I CCATGG 2 cut(s) 30, 1344
BspACI CCGC 4 cut(s) 256, 658, 980, 1031
BspANI GGCC 5 cut(s) 237, 761, 768, 1274, 1765
BspCNI CTCAG 1 cut(s) 548
BspEI TCCGGA 1 cut(s) 1416
BspFNI CGCG 1 cut(s) 980
BspLI GGNNCC 6 cut(s) 998, 1044, 1236, 1334, 1435, 1467
BspMAI CTGCAG 2 cut(s) 995, 1150
BspPI GGATC 6 cut(s) 1098, 1229, 1242, 1408, 1428, 1441
BspQI GCTCTTC 1 cut(s) 1122
BspT104I TTCGAA 1 cut(s) 62
BspT107I GGYRCC 2 cut(s) 1332, 1465
BsrDI GCAATG 2 cut(s) 1238, 1275
BsrFI RCCGGY 2 cut(s) 1194, 1274
BsrGI TGTACA 2 cut(s) 402, 1605
BsrI ACTGG 1 cut(s) 1400
BssAI RCCGGY 2 cut(s) 1194, 1274
BssECI CCNNGG 4 cut(s) 30, 763, 1086, 1344
BssMI GATC 9 cut(s) 967, 1050, 1090, 1234, 1282, 1413, 1433, 1572, 1711
BssNI GRCGYC 2 cut(s) 213, 363
BssT1I CCWWGG 3 cut(s) 30, 763, 1344
Bst2UI CCWGG 3 cut(s) 328, 770, 1498
Bst4CI ACNGT 7 cut(s) 407, 776, 938, 1015, 1450, 1539, 1777
Bst6I CTCTTC 3 cut(s) 121, 1122, 1744
BstACI GRCGYC 2 cut(s) 213, 363
BstAUI TGTACA 2 cut(s) 402, 1605
BstBI TTCGAA 1 cut(s) 62
BstC8I GCNNGC 6 cut(s) 413, 759, 1221, 1266, 1276, 1408
BstDEI CTNAG 7 cut(s) 535, 1001, 1047, 1128, 1502, 1676, 1767
BstDSI CCRYGG 2 cut(s) 30, 1344
BstF5I GGATG 7 cut(s) 143, 261, 988, 1108, 1585, 1591, 1733
BstFNI CGCG 1 cut(s) 980
BstKTI GATC 9 cut(s) 970, 1053, 1093, 1237, 1285, 1416, 1436, 1575, 1714
BstMBI GATC 9 cut(s) 967, 1050, 1090, 1234, 1282, 1413, 1433, 1572, 1711
BstMCI CGRYCG 1 cut(s) 238
BstNI CCWGG 3 cut(s) 328, 770, 1498
BstNSI RCATGY 3 cut(s) 620, 1410, 1594
BstSCI CCNGG 5 cut(s) 237, 326, 768, 1436, 1496
BstSFI CTRYAG 2 cut(s) 991, 1146
BstUI CGCG 1 cut(s) 980
BstV1I GCAGC 5 cut(s) 245, 256, 1005, 1040, 1132
BstX2I RGATCY 3 cut(s) 1090, 1234, 1433
BstYI RGATCY 3 cut(s) 1090, 1234, 1433
BstZI CGGCCG 1 cut(s) 235
Bsu36I CCTNAGG 1 cut(s) 1001
BsuI GTATCC 1 cut(s) 822
BsuRI GGCC 5 cut(s) 237, 761, 768, 1274, 1765
BtgI CCRYGG 2 cut(s) 30, 1344
BtgZI GCGATG 1 cut(s) 1629
BtrI CACGTC 1 cut(s) 250
BtsCI GGATG 7 cut(s) 143, 261, 988, 1108, 1585, 1591, 1733
BtsI GCAGTG 3 cut(s) 716, 1061, 1764
BtsIMutI CAGTG 5 cut(s) 412, 716, 1061, 1455, 1764
Cac8I GCNNGC 6 cut(s) 413, 759, 1221, 1266, 1276, 1408
Cfr10I RCCGGY 2 cut(s) 1194, 1274
Cfr13I GGNCC 2 cut(s) 760, 865
CseI GACGC 3 cut(s) 221, 464, 1121
CsiI ACCWGGT 1 cut(s) 326
Csp6I GTAC 8 cut(s) 23, 90, 403, 1303, 1333, 1361, 1562, 1606
CspAI ACCGGT 1 cut(s) 1194
CspCI CAANNNNNGTGG 2 cut(s) 1431, 1466
CviAII CATG 8 cut(s) 31, 467, 496, 617, 1345, 1407, 1576, 1591
CviQI GTAC 8 cut(s) 23, 90, 403, 1303, 1333, 1361, 1562, 1606
DdeI CTNAG 7 cut(s) 535, 1001, 1047, 1128, 1502, 1676, 1767
DpnI GATC 9 cut(s) 969, 1052, 1092, 1236, 1284, 1415, 1435, 1574, 1713
DpnII GATC 9 cut(s) 967, 1050, 1090, 1234, 1282, 1413, 1433, 1572, 1711
EaeI YGGCCR 2 cut(s) 235, 1272
EagI CGGCCG 1 cut(s) 235
Eam1104I CTCTTC 3 cut(s) 121, 1122, 1744
EarI CTCTTC 3 cut(s) 121, 1122, 1744
Ecl136II GAGCTC 1 cut(s) 279
EclXI CGGCCG 1 cut(s) 235
Eco130I CCWWGG 3 cut(s) 30, 763, 1344
Eco147I AGGCCT 1 cut(s) 1765
Eco24I GRGCYC 2 cut(s) 281, 841
Eco32I GATATC 1 cut(s) 139
Eco47I GGWCC 1 cut(s) 865
Eco52I CGGCCG 1 cut(s) 235
Eco53kI GAGCTC 1 cut(s) 279
Eco57I CTGAAG 2 cut(s) 359, 1103
Eco81I CCTNAGG 1 cut(s) 1001
EcoICRI GAGCTC 1 cut(s) 279
EcoRII CCWGG 3 cut(s) 326, 768, 1496
EcoRV GATATC 1 cut(s) 139
EcoT14I CCWWGG 3 cut(s) 30, 763, 1344
EcoT22I ATGCAT 1 cut(s) 668
EcoT38I GRGCYC 2 cut(s) 281, 841
ErhI CCWWGG 3 cut(s) 30, 763, 1344
FaeI CATG 8 cut(s) 34, 470, 499, 620, 1348, 1410, 1579, 1594
FalI AAGNNNNNCTT 6 cut(s) 1242, 1274, 1476, 1508, 1669, 1701
FaqI GGGAC 3 cut(s) 1068, 1170, 1335
FatI CATG 8 cut(s) 30, 466, 495, 616, 1344, 1406, 1575, 1590
FauNDI CATATG 2 cut(s) 910, 955
FblI GTMKAC 1 cut(s) 450
Fnu4HI GCNGC 6 cut(s) 259, 270, 1019, 1029, 1032, 1146
FokI GGATG 7 cut(s) 130, 248, 995, 1115, 1592, 1598, 1720
FriOI GRGCYC 2 cut(s) 281, 841
Fsp4HI GCNGC 6 cut(s) 259, 270, 1019, 1029, 1032, 1146
FspBI CTAG 3 cut(s) 383, 1025, 1364
GluI GCNGC 6 cut(s) 259, 270, 1019, 1029, 1032, 1146
GsuI CTGGAG 2 cut(s) 1374, 1608
HaeIII GGCC 5 cut(s) 237, 761, 768, 1274, 1765
HapII CCGG 6 cut(s) 238, 1195, 1275, 1417, 1431, 1438
HgaI GACGC 3 cut(s) 221, 464, 1121
Hin1I GRCGYC 2 cut(s) 213, 363
Hin1II CATG 8 cut(s) 34, 470, 499, 620, 1348, 1410, 1579, 1594
HincII GTYRAC 1 cut(s) 184
HindII GTYRAC 1 cut(s) 184
HindIII AAGCTT 2 cut(s) 639, 1251
HinfI GANTC 6 cut(s) 59, 374, 741, 749, 845, 975
HpaI GTTAAC 1 cut(s) 184
HpaII CCGG 6 cut(s) 238, 1195, 1275, 1417, 1431, 1438
HphI GGTGA 4 cut(s) 95, 117, 736, 1765
Hpy166II GTNNAC 6 cut(s) 184, 253, 451, 988, 1453, 1608
Hpy8I GTNNAC 6 cut(s) 184, 253, 451, 988, 1453, 1608
Hpy99I CGWCG 5 cut(s) 215, 365, 368, 458, 1283
HpyAV CCTTC 4 cut(s) 305, 1033, 1171, 1480
HpyCH4III ACNGT 7 cut(s) 407, 776, 938, 1015, 1450, 1539, 1777
HpyCH4IV ACGT 2 cut(s) 249, 363
HpyF3I CTNAG 7 cut(s) 535, 1001, 1047, 1128, 1502, 1676, 1767
HpySE526I ACGT 2 cut(s) 249, 363
Hsp92I GRCGYC 2 cut(s) 213, 363
Hsp92II CATG 8 cut(s) 34, 470, 499, 620, 1348, 1410, 1579, 1594
Kpn2I TCCGGA 1 cut(s) 1416
KpnI GGTACC 1 cut(s) 1336
KroI GCCGGC 1 cut(s) 1274
KroNI GCCGGC 1 cut(s) 1276
KspAI GTTAAC 1 cut(s) 184
Kzo9I GATC 9 cut(s) 967, 1050, 1090, 1234, 1282, 1413, 1433, 1572, 1711
LguI GCTCTTC 1 cut(s) 1122
LmnI GCTCC 4 cut(s) 276, 783, 1042, 1216
Lsp1109I GCAGC 5 cut(s) 245, 256, 1005, 1040, 1132
LweI GCATC 3 cut(s) 270, 653, 931
MabI ACCWGGT 1 cut(s) 326
MaeI CTAG 3 cut(s) 383, 1025, 1364
MaeII ACGT 2 cut(s) 249, 363
MaeIII GTNAC 8 cut(s) 230, 395, 544, 700, 800, 1007, 1059, 1593
MalI GATC 9 cut(s) 969, 1052, 1092, 1236, 1284, 1415, 1435, 1574, 1713
MboI GATC 9 cut(s) 967, 1050, 1090, 1234, 1282, 1413, 1433, 1572, 1711
MboII GAAGA 8 cut(s) 108, 111, 114, 352, 510, 1109, 1496, 1731
MflI RGATCY 3 cut(s) 1090, 1234, 1433
MhlI GDGCHC 4 cut(s) 281, 841, 1081, 1510
MluCI AATT 1 cut(s) 790
MlyI GAGTC 1 cut(s) 368
MmeI TCCRAC 1 cut(s) 346
Mph1103I ATGCAT 1 cut(s) 668
MroI TCCGGA 1 cut(s) 1416
MroNI GCCGGC 1 cut(s) 1274
MroXI GAANNNNTTC 2 cut(s) 296, 1538
MseI TTAA 3 cut(s) 183, 1479, 1786
MslI CAYNNNNRTG 1 cut(s) 671
MspA1I CMGCKG 2 cut(s) 258, 1031
MspI CCGG 6 cut(s) 238, 1195, 1275, 1417, 1431, 1438
MspR9I CCNGG 5 cut(s) 239, 328, 770, 1438, 1498
MvaI CCWGG 3 cut(s) 328, 770, 1498
MvnI CGCG 1 cut(s) 980
NaeI GCCGGC 1 cut(s) 1276
NciI CCSGG 2 cut(s) 239, 1438
NcoI CCATGG 2 cut(s) 30, 1344
NdeI CATATG 2 cut(s) 910, 955
NdeII GATC 9 cut(s) 967, 1050, 1090, 1234, 1282, 1413, 1433, 1572, 1711
NgoMIV GCCGGC 1 cut(s) 1274
NlaIII CATG 8 cut(s) 34, 470, 499, 620, 1348, 1410, 1579, 1594
NlaIV GGNNCC 6 cut(s) 998, 1044, 1236, 1334, 1435, 1467
NmeAIII GCCGAG 1 cut(s) 281
NmuCI GTSAC 4 cut(s) 544, 700, 1059, 1593
NsiI ATGCAT 1 cut(s) 668
NspI RCATGY 3 cut(s) 620, 1410, 1594
NspV TTCGAA 1 cut(s) 62
PaeI GCATGC 1 cut(s) 1410
PceI AGGCCT 1 cut(s) 1765
PciI ACATGT 1 cut(s) 1590
PciSI GCTCTTC 1 cut(s) 1122
PcsI WCGNNNNNNNCGW 1 cut(s) 219
PdiI GCCGGC 1 cut(s) 1276
PdmI GAANNNNTTC 2 cut(s) 296, 1538
PfeI GAWTC 5 cut(s) 59, 741, 749, 845, 975
PflMI CCANNNNNTGG 2 cut(s) 1244, 1522
PfoI TCCNGGA 1 cut(s) 1436
PinAI ACCGGT 1 cut(s) 1194
PkrI GCNGC 6 cut(s) 260, 271, 1020, 1030, 1033, 1147
PleI GAGTC 1 cut(s) 368
PpsI GAGTC 1 cut(s) 368
PscI ACATGT 1 cut(s) 1590
Psp124BI GAGCTC 1 cut(s) 281
Psp6I CCWGG 3 cut(s) 326, 768, 1496
PspGI CCWGG 3 cut(s) 326, 768, 1496
PspN4I GGNNCC 6 cut(s) 998, 1044, 1236, 1334, 1435, 1467
PspPI GGNCC 2 cut(s) 760, 865
PstI CTGCAG 2 cut(s) 995, 1150
PsuI RGATCY 3 cut(s) 1090, 1234, 1433
RsaI GTAC 8 cut(s) 24, 91, 404, 1304, 1334, 1362, 1563, 1607
RsaNI GTAC 8 cut(s) 23, 90, 403, 1303, 1333, 1361, 1562, 1606
RseI CAYNNNNRTG 1 cut(s) 671
SacI GAGCTC 1 cut(s) 281
SapI GCTCTTC 1 cut(s) 1122
SaqAI TTAA 3 cut(s) 183, 1479, 1786
SatI GCNGC 6 cut(s) 259, 270, 1019, 1029, 1032, 1146
Sau3AI GATC 9 cut(s) 967, 1050, 1090, 1234, 1282, 1413, 1433, 1572, 1711
Sau96I GGNCC 2 cut(s) 760, 865
ScaI AGTACT 2 cut(s) 91, 1563
SchI GAGTC 1 cut(s) 368
ScrFI CCNGG 5 cut(s) 239, 328, 770, 1438, 1498
SduI GDGCHC 4 cut(s) 281, 841, 1081, 1510
SexAI ACCWGGT 1 cut(s) 326
SfaNI GCATC 3 cut(s) 270, 653, 931
SfcI CTRYAG 2 cut(s) 991, 1146
SfuI TTCGAA 1 cut(s) 62
SinI GGWCC 1 cut(s) 865
SmiMI CAYNNNNRTG 1 cut(s) 671
SmlI CTYRAG 4 cut(s) 416, 578, 707, 1307
SmoI CTYRAG 4 cut(s) 416, 578, 707, 1307
SphI GCATGC 1 cut(s) 1410
Sse9I AATT 1 cut(s) 790
SseBI AGGCCT 1 cut(s) 1765
SsiI CCGC 4 cut(s) 256, 658, 980, 1031
SspMI CTAG 3 cut(s) 383, 1025, 1364
SstI GAGCTC 1 cut(s) 281
StuI AGGCCT 1 cut(s) 1765
StyD4I CCNGG 5 cut(s) 237, 326, 768, 1436, 1496
StyI CCWWGG 3 cut(s) 30, 763, 1344
TaaI ACNGT 7 cut(s) 407, 776, 938, 1015, 1450, 1539, 1777
TaiI ACGT 2 cut(s) 252, 366
TaqI TCGA 5 cut(s) 62, 171, 198, 752, 1163
TasI AATT 1 cut(s) 790
TatI WGTACW 5 cut(s) 89, 402, 1360, 1561, 1605
TauI GCSGC 1 cut(s) 1034
TfiI GAWTC 5 cut(s) 59, 741, 749, 845, 975
Tru1I TTAA 3 cut(s) 183, 1479, 1786
Tru9I TTAA 3 cut(s) 183, 1479, 1786
TscAI CASTG 5 cut(s) 412, 723, 1068, 1455, 1764
TseFI GTSAC 4 cut(s) 544, 700, 1059, 1593
TseI GCWGC 5 cut(s) 258, 269, 1018, 1028, 1145
Tsp45I GTSAC 4 cut(s) 544, 700, 1059, 1593
TspDTI ATGAA 3 cut(s) 484, 918, 1307
TspRI CASTG 5 cut(s) 412, 723, 1068, 1455, 1764
Van91I CCANNNNNTGG 2 cut(s) 1244, 1522
VpaK11BI GGWCC 1 cut(s) 865
XceI RCATGY 3 cut(s) 620, 1410, 1594
XmiI GTMKAC 1 cut(s) 450
XmnI GAANNNNTTC 2 cut(s) 296, 1538
XspI CTAG 3 cut(s) 383, 1025, 1364
ZraI GACGTC 1 cut(s) 364
ZrmI AGTACT 2 cut(s) 91, 1563
Zsp2I ATGCAT 1 cut(s) 668
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.