Regulatory protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64280 AT4G26120 AT4G26120 |
| fragaria_vesca | FvH4_1g07810 |
| malus_domestica | MD02G1082100.v1.1 MD15G1209500.v1.1 |
| prunus_persica | Prupe.7G206800_v2.0.a1 Prupe.7G206800_v2.0.a1 Prupe.7G206800_v2.0.a1 |
| pyrus_communis | pycom02g06500 |
| rosa_chinensis | RchiOBHm_Chr2g0093681 |
| rosa_laevigata | RLG00000016428 RLG00000026474 |
| rosa_multiflora | Rmu_sc0001465.1_g000015 Rmu_sc0005268.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00147900 |
| rosa_rugosa | Rorug02G0038800 Rorug02G0038900 Rorug05G0356700 |
| rosa_samantha | Rh2AG085200 Rh2AG085300 Rh2BG085700 Rh2CG088000 Rh2CG088100 Rh2DG083500 Rh3AG094800 Rh3CG099100 Rh3DG098500 |
| rosa_wichuraiana | Rw0G013890 Rw3G008160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AbsI | CCTCGAGG | 1 cut(s) | 229 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1220 |
| AccI | GTMKAC | 1 cut(s) | 408 |
| AccIII | TCCGGA | 1 cut(s) | 766 |
| AciI | CCGC | 5 cut(s) | 366, 956, 1004, 1124, 1171 |
| AclWI | GGATC | 4 cut(s) | 681, 694, 1205, 1218 |
| AcoI | YGGCCR | 1 cut(s) | 193 |
| AcuI | CTGAAG | 1 cut(s) | 1079 |
| AcyI | GRCGYC | 1 cut(s) | 171 |
| AfaI | GTAC | 3 cut(s) | 161, 362, 1280 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 213, 1220 |
| AgeI | ACCGGT | 1 cut(s) | 213 |
| AgsI | TTSAA | 7 cut(s) | 247, 293, 298, 480, 488, 856, 1135 |
| AjnI | CCWGG | 1 cut(s) | 1010 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 306, 338 |
| Alw21I | GWGCWC | 3 cut(s) | 239, 424, 1057 |
| AlwI | GGATC | 4 cut(s) | 681, 694, 1205, 1218 |
| Ama87I | CYCGRG | 1 cut(s) | 229 |
| Aor13HI | TCCGGA | 1 cut(s) | 766 |
| AoxI | GGCC | 1 cut(s) | 193 |
| ApeKI | GCWGC | 5 cut(s) | 578, 752, 937, 994, 1121 |
| AsiGI | ACCGGT | 1 cut(s) | 213 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 254 |
| AsuC2I | CCSGG | 1 cut(s) | 197 |
| AsuHPI | GGTGA | 4 cut(s) | 59, 84, 1163, 1307 |
| AsuII | TTCGAA | 1 cut(s) | 844 |
| AvaI | CYCGRG | 1 cut(s) | 229 |
| AxyI | CCTNAGG | 1 cut(s) | 977 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1262, 1295 |
| BamHI | GGATCC | 2 cut(s) | 686, 1210 |
| BanII | GRGCYC | 2 cut(s) | 239, 817 |
| BbsI | GAAGAC | 2 cut(s) | 247, 1149 |
| Bbv12I | GWGCWC | 3 cut(s) | 239, 424, 1057 |
| BbvI | GCAGC | 5 cut(s) | 565, 739, 924, 981, 1108 |
| BccI | CCATC | 1 cut(s) | 1073 |
| BceAI | ACGGC | 1 cut(s) | 208 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 401, 435, 869, 903 |
| BciT130I | CCWGG | 1 cut(s) | 1012 |
| BcnI | CCSGG | 1 cut(s) | 197 |
| BfmI | CTRYAG | 2 cut(s) | 387, 1308 |
| BisI | GCNGC | 7 cut(s) | 367, 579, 753, 938, 995, 1005, 1122 |
| BlsI | GCNGC | 7 cut(s) | 368, 580, 754, 939, 996, 1006, 1123 |
| Bme1390I | CCNGG | 2 cut(s) | 197, 1012 |
| BmeT110I | CYCGRG | 1 cut(s) | 229 |
| BmiI | GGNNCC | 5 cut(s) | 154, 688, 974, 1020, 1212 |
| BmrFI | CCNGG | 2 cut(s) | 197, 1012 |
| BmsI | GCATC | 4 cut(s) | 228, 795, 871, 907 |
| BpiI | GAAGAC | 2 cut(s) | 247, 1149 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 703, 735 |
| Bpu14I | TTCGAA | 1 cut(s) | 844 |
| BpuEI | CTTGAG | 6 cut(s) | 101, 359, 557, 666, 686, 1304 |
| BpuMI | CCSGG | 1 cut(s) | 197 |
| BsaBI | GATNNNNATC | 1 cut(s) | 331 |
| BsaHI | GRCGYC | 1 cut(s) | 171 |
| BsaJI | CCNNGG | 1 cut(s) | 1062 |
| BsaWI | WCCGGW | 2 cut(s) | 213, 766 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 213, 1220 |
| Bse118I | RCCGGY | 1 cut(s) | 213 |
| Bse1I | ACTGG | 2 cut(s) | 504, 1214 |
| Bse21I | CCTNAGG | 1 cut(s) | 977 |
| Bse3DI | GCAATG | 2 cut(s) | 674, 1251 |
| Bse8I | GATNNNNATC | 1 cut(s) | 331 |
| BseAI | TCCGGA | 1 cut(s) | 766 |
| BseBI | CCWGG | 1 cut(s) | 1012 |
| BseDI | CCNNGG | 1 cut(s) | 1062 |
| BseGI | GGATG | 5 cut(s) | 110, 219, 964, 1072, 1084 |
| BseJI | GATNNNNATC | 1 cut(s) | 331 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 213, 1220 |
| BseMI | GCAATG | 2 cut(s) | 674, 1251 |
| BseMII | CTCAG | 2 cut(s) | 273, 968 |
| BseNI | ACTGG | 2 cut(s) | 504, 1214 |
| BseRI | GAGGAG | 3 cut(s) | 87, 145, 247 |
| BseX3I | CGGCCG | 1 cut(s) | 193 |
| BseXI | GCAGC | 5 cut(s) | 565, 739, 924, 981, 1108 |
| BsgI | GTGCAG | 1 cut(s) | 980 |
| Bsh1285I | CGRYCG | 1 cut(s) | 196 |
| BshFI | GGCC | 1 cut(s) | 195 |
| BshTI | ACCGGT | 1 cut(s) | 213 |
| BsiEI | CGRYCG | 1 cut(s) | 196 |
| BsiHKAI | GWGCWC | 3 cut(s) | 239, 424, 1057 |
| BsiHKCI | CYCGRG | 1 cut(s) | 229 |
| BsiSI | CCGG | 3 cut(s) | 196, 214, 767 |
| BslFI | GGGAC | 3 cut(s) | 188, 423, 1044 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 213, 1220 |
| BsmFI | GGGAC | 3 cut(s) | 188, 423, 1044 |
| BsmI | GAATGC | 2 cut(s) | 852, 1304 |
| BsnI | GGCC | 1 cut(s) | 195 |
| BsoBI | CYCGRG | 1 cut(s) | 229 |
| Bsp119I | TTCGAA | 1 cut(s) | 844 |
| Bsp1286I | GDGCHC | 4 cut(s) | 239, 424, 817, 1057 |
| Bsp13I | TCCGGA | 1 cut(s) | 766 |
| Bsp1407I | TGTACA | 1 cut(s) | 360 |
| Bsp143I | GATC | 5 cut(s) | 686, 1026, 1098, 1210, 1258 |
| BspACI | CCGC | 5 cut(s) | 366, 956, 1004, 1124, 1171 |
| BspANI | GGCC | 1 cut(s) | 195 |
| BspCNI | CTCAG | 2 cut(s) | 272, 969 |
| BspEI | TCCGGA | 1 cut(s) | 766 |
| BspLI | GGNNCC | 5 cut(s) | 154, 688, 974, 1020, 1212 |
| BspPI | GGATC | 4 cut(s) | 681, 694, 1205, 1218 |
| BspQI | GCTCTTC | 1 cut(s) | 1098 |
| BspT104I | TTCGAA | 1 cut(s) | 844 |
| BsrDI | GCAATG | 2 cut(s) | 674, 1251 |
| BsrFI | RCCGGY | 1 cut(s) | 213 |
| BsrGI | TGTACA | 1 cut(s) | 360 |
| BsrI | ACTGG | 2 cut(s) | 504, 1214 |
| BssAI | RCCGGY | 1 cut(s) | 213 |
| BssECI | CCNNGG | 1 cut(s) | 1062 |
| BssMI | GATC | 5 cut(s) | 686, 1026, 1098, 1210, 1258 |
| BssNI | GRCGYC | 1 cut(s) | 171 |
| Bst2UI | CCWGG | 1 cut(s) | 1012 |
| Bst4CI | ACNGT | 4 cut(s) | 339, 734, 914, 991 |
| Bst6I | CTCTTC | 2 cut(s) | 88, 1098 |
| BstACI | GRCGYC | 1 cut(s) | 171 |
| BstAUI | TGTACA | 1 cut(s) | 360 |
| BstBI | TTCGAA | 1 cut(s) | 844 |
| BstC8I | GCNNGC | 5 cut(s) | 371, 1197, 1242, 1252, 1304 |
| BstDEI | CTNAG | 5 cut(s) | 259, 977, 1023, 1104, 1343 |
| BstF5I | GGATG | 5 cut(s) | 110, 219, 964, 1072, 1084 |
| BstKTI | GATC | 5 cut(s) | 689, 1029, 1101, 1213, 1261 |
| BstMBI | GATC | 5 cut(s) | 686, 1026, 1098, 1210, 1258 |
| BstMCI | CGRYCG | 1 cut(s) | 196 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 428 |
| BstNI | CCWGG | 1 cut(s) | 1012 |
| BstNSI | RCATGY | 1 cut(s) | 890 |
| BstSCI | CCNGG | 2 cut(s) | 195, 1010 |
| BstSFI | CTRYAG | 2 cut(s) | 387, 1308 |
| BstV1I | GCAGC | 5 cut(s) | 565, 739, 924, 981, 1108 |
| BstV2I | GAAGAC | 2 cut(s) | 247, 1149 |
| BstX2I | RGATCY | 2 cut(s) | 686, 1210 |
| BstYI | RGATCY | 2 cut(s) | 686, 1210 |
| BstZI | CGGCCG | 1 cut(s) | 193 |
| Bsu36I | CCTNAGG | 1 cut(s) | 977 |
| BsuRI | GGCC | 1 cut(s) | 195 |
| BtgZI | GCGATG | 1 cut(s) | 1269 |
| BtsCI | GGATG | 5 cut(s) | 110, 219, 964, 1072, 1084 |
| BtsIMutI | CAGTG | 2 cut(s) | 335, 1221 |
| Cac8I | GCNNGC | 5 cut(s) | 371, 1197, 1242, 1252, 1304 |
| Cfr10I | RCCGGY | 1 cut(s) | 213 |
| CseI | GACGC | 2 cut(s) | 179, 1097 |
| Csp6I | GTAC | 3 cut(s) | 160, 361, 1279 |
| CspAI | ACCGGT | 1 cut(s) | 213 |
| CviAII | CATG | 3 cut(s) | 425, 454, 887 |
| CviQI | GTAC | 3 cut(s) | 160, 361, 1279 |
| DdeI | CTNAG | 5 cut(s) | 259, 977, 1023, 1104, 1343 |
| DpnI | GATC | 5 cut(s) | 688, 1028, 1100, 1212, 1260 |
| DpnII | GATC | 5 cut(s) | 686, 1026, 1098, 1210, 1258 |
| EaeI | YGGCCR | 1 cut(s) | 193 |
| EagI | CGGCCG | 1 cut(s) | 193 |
| Eam1104I | CTCTTC | 2 cut(s) | 88, 1098 |
| EarI | CTCTTC | 2 cut(s) | 88, 1098 |
| Ecl136II | GAGCTC | 1 cut(s) | 237 |
| EclXI | CGGCCG | 1 cut(s) | 193 |
| Eco24I | GRGCYC | 2 cut(s) | 239, 817 |
| Eco32I | GATATC | 1 cut(s) | 106 |
| Eco52I | CGGCCG | 1 cut(s) | 193 |
| Eco53kI | GAGCTC | 1 cut(s) | 237 |
| Eco57I | CTGAAG | 1 cut(s) | 1079 |
| Eco81I | CCTNAGG | 1 cut(s) | 977 |
| Eco88I | CYCGRG | 1 cut(s) | 229 |
| EcoICRI | GAGCTC | 1 cut(s) | 237 |
| EcoRII | CCWGG | 1 cut(s) | 1010 |
| EcoRV | GATATC | 1 cut(s) | 106 |
| EcoT38I | GRGCYC | 2 cut(s) | 239, 817 |
| FaeI | CATG | 3 cut(s) | 428, 457, 890 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 239, 271, 1218, 1250 |
| FaqI | GGGAC | 3 cut(s) | 188, 423, 1044 |
| FatI | CATG | 3 cut(s) | 424, 453, 886 |
| FblI | GTMKAC | 1 cut(s) | 408 |
| Fnu4HI | GCNGC | 7 cut(s) | 367, 579, 753, 938, 995, 1005, 1122 |
| FokI | GGATG | 5 cut(s) | 97, 206, 971, 1079, 1091 |
| FriOI | GRGCYC | 2 cut(s) | 239, 817 |
| Fsp4HI | GCNGC | 7 cut(s) | 367, 579, 753, 938, 995, 1005, 1122 |
| GluI | GCNGC | 7 cut(s) | 367, 579, 753, 938, 995, 1005, 1122 |
| HaeIII | GGCC | 1 cut(s) | 195 |
| HapII | CCGG | 3 cut(s) | 196, 214, 767 |
| HgaI | GACGC | 2 cut(s) | 179, 1097 |
| Hin1I | GRCGYC | 1 cut(s) | 171 |
| Hin1II | CATG | 3 cut(s) | 428, 457, 890 |
| HindIII | AAGCTT | 2 cut(s) | 597, 1227 |
| HinfI | GANTC | 9 cut(s) | 29, 332, 413, 699, 707, 795, 821, 871, 1154 |
| HpaII | CCGG | 3 cut(s) | 196, 214, 767 |
| HphI | GGTGA | 4 cut(s) | 59, 84, 1163, 1307 |
| Hpy166II | GTNNAC | 2 cut(s) | 211, 409 |
| Hpy188I | TCNGA | 8 cut(s) | 28, 130, 496, 646, 741, 826, 1066, 1098 |
| Hpy188III | TCNNGA | 9 cut(s) | 101, 247, 536, 665, 728, 767, 799, 818, 875 |
| Hpy8I | GTNNAC | 2 cut(s) | 211, 409 |
| Hpy99I | CGWCG | 3 cut(s) | 173, 323, 446 |
| HpyAV | CCTTC | 2 cut(s) | 304, 1009 |
| HpyCH4III | ACNGT | 4 cut(s) | 339, 734, 914, 991 |
| HpyCH4IV | ACGT | 2 cut(s) | 252, 321 |
| HpyCH4V | TGCA | 8 cut(s) | 219, 808, 884, 890, 920, 969, 997, 1244 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 428 |
| HpyF3I | CTNAG | 5 cut(s) | 259, 977, 1023, 1104, 1343 |
| HpySE526I | ACGT | 2 cut(s) | 252, 321 |
| Hsp92I | GRCGYC | 1 cut(s) | 171 |
| Hsp92II | CATG | 3 cut(s) | 428, 457, 890 |
| Kpn2I | TCCGGA | 1 cut(s) | 766 |
| Kzo9I | GATC | 5 cut(s) | 686, 1026, 1098, 1210, 1258 |
| LguI | GCTCTTC | 1 cut(s) | 1098 |
| LmnI | GCTCC | 5 cut(s) | 158, 234, 741, 1018, 1192 |
| Lsp1109I | GCAGC | 5 cut(s) | 565, 739, 924, 981, 1108 |
| LweI | GCATC | 4 cut(s) | 228, 795, 871, 907 |
| MaeII | ACGT | 2 cut(s) | 252, 321 |
| MaeIII | GTNAC | 7 cut(s) | 353, 502, 658, 758, 983, 1035, 1069 |
| MalI | GATC | 5 cut(s) | 688, 1028, 1100, 1212, 1260 |
| MboI | GATC | 5 cut(s) | 686, 1026, 1098, 1210, 1258 |
| MboII | GAAGA | 9 cut(s) | 75, 78, 81, 247, 310, 468, 1085, 1149, 1152 |
| MflI | RGATCY | 2 cut(s) | 686, 1210 |
| MhlI | GDGCHC | 4 cut(s) | 239, 424, 817, 1057 |
| MluCI | AATT | 3 cut(s) | 293, 951, 964 |
| MlyI | GAGTC | 2 cut(s) | 407, 1163 |
| MmeI | TCCRAC | 2 cut(s) | 57, 304 |
| MroI | TCCGGA | 1 cut(s) | 766 |
| MroXI | GAANNNNTTC | 1 cut(s) | 254 |
| MseI | TTAA | 1 cut(s) | 1338 |
| MspA1I | CMGCKG | 1 cut(s) | 366 |
| MspI | CCGG | 3 cut(s) | 196, 214, 767 |
| MspR9I | CCNGG | 2 cut(s) | 197, 1012 |
| Mva1269I | GAATGC | 2 cut(s) | 852, 1304 |
| MvaI | CCWGG | 1 cut(s) | 1012 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 428 |
| NciI | CCSGG | 1 cut(s) | 197 |
| NdeII | GATC | 5 cut(s) | 686, 1026, 1098, 1210, 1258 |
| NlaIII | CATG | 3 cut(s) | 428, 457, 890 |
| NlaIV | GGNNCC | 5 cut(s) | 154, 688, 974, 1020, 1212 |
| NmuCI | GTSAC | 3 cut(s) | 502, 658, 1035 |
| NspI | RCATGY | 1 cut(s) | 890 |
| NspV | TTCGAA | 1 cut(s) | 844 |
| PaeR7I | CTCGAG | 1 cut(s) | 229 |
| PciSI | GCTCTTC | 1 cut(s) | 1098 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 177, 236 |
| PctI | GAATGC | 2 cut(s) | 852, 1304 |
| PdmI | GAANNNNTTC | 1 cut(s) | 254 |
| PfeI | GAWTC | 7 cut(s) | 29, 332, 699, 707, 795, 821, 871 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1220 |
| PinAI | ACCGGT | 1 cut(s) | 213 |
| PkrI | GCNGC | 7 cut(s) | 368, 580, 754, 939, 996, 1006, 1123 |
| PleI | GAGTC | 2 cut(s) | 407, 1162 |
| PpsI | GAGTC | 2 cut(s) | 407, 1162 |
| Psp124BI | GAGCTC | 1 cut(s) | 239 |
| Psp6I | CCWGG | 1 cut(s) | 1010 |
| PspGI | CCWGG | 1 cut(s) | 1010 |
| PspN4I | GGNNCC | 5 cut(s) | 154, 688, 974, 1020, 1212 |
| PspXI | VCTCGAGB | 1 cut(s) | 229 |
| PsuI | RGATCY | 2 cut(s) | 686, 1210 |
| RsaI | GTAC | 3 cut(s) | 161, 362, 1280 |
| RsaNI | GTAC | 3 cut(s) | 160, 361, 1279 |
| SacI | GAGCTC | 1 cut(s) | 239 |
| SapI | GCTCTTC | 1 cut(s) | 1098 |
| SaqAI | TTAA | 1 cut(s) | 1338 |
| SatI | GCNGC | 7 cut(s) | 367, 579, 753, 938, 995, 1005, 1122 |
| Sau3AI | GATC | 5 cut(s) | 686, 1026, 1098, 1210, 1258 |
| SchI | GAGTC | 2 cut(s) | 407, 1163 |
| ScrFI | CCNGG | 2 cut(s) | 197, 1012 |
| SduI | GDGCHC | 4 cut(s) | 239, 424, 817, 1057 |
| SfaNI | GCATC | 4 cut(s) | 228, 795, 871, 907 |
| SfcI | CTRYAG | 2 cut(s) | 387, 1308 |
| Sfr274I | CTCGAG | 1 cut(s) | 229 |
| SfuI | TTCGAA | 1 cut(s) | 844 |
| SgrAI | CRCCGGYG | 1 cut(s) | 213 |
| SlaI | CTCGAG | 1 cut(s) | 229 |
| SmlI | CTYRAG | 7 cut(s) | 116, 229, 374, 536, 665, 681, 1283 |
| SmoI | CTYRAG | 7 cut(s) | 116, 229, 374, 536, 665, 681, 1283 |
| Sse9I | AATT | 3 cut(s) | 293, 951, 964 |
| SsiI | CCGC | 5 cut(s) | 366, 956, 1004, 1124, 1171 |
| SstI | GAGCTC | 1 cut(s) | 239 |
| StyD4I | CCNGG | 2 cut(s) | 195, 1010 |
| TaaI | ACNGT | 4 cut(s) | 339, 734, 914, 991 |
| TaiI | ACGT | 2 cut(s) | 255, 324 |
| TaqI | TCGA | 4 cut(s) | 230, 710, 819, 844 |
| TasI | AATT | 3 cut(s) | 293, 951, 964 |
| TatI | WGTACW | 1 cut(s) | 360 |
| TauI | GCSGC | 2 cut(s) | 369, 1007 |
| TfiI | GAWTC | 7 cut(s) | 29, 332, 699, 707, 795, 821, 871 |
| Tru1I | TTAA | 1 cut(s) | 1338 |
| Tru9I | TTAA | 1 cut(s) | 1338 |
| TscAI | CASTG | 2 cut(s) | 342, 1221 |
| TseFI | GTSAC | 3 cut(s) | 502, 658, 1035 |
| TseI | GCWGC | 5 cut(s) | 578, 752, 937, 994, 1121 |
| Tsp45I | GTSAC | 3 cut(s) | 502, 658, 1035 |
| TspDTI | ATGAA | 2 cut(s) | 442, 1283 |
| TspGWI | ACGGA | 1 cut(s) | 679 |
| TspRI | CASTG | 2 cut(s) | 342, 1221 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1220 |
| XceI | RCATGY | 1 cut(s) | 890 |
| XhoI | CTCGAG | 1 cut(s) | 229 |
| XmiI | GTMKAC | 1 cut(s) | 408 |
| XmnI | GAANNNNTTC | 1 cut(s) | 254 |