Rorug02G0038800

Regulatory protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0005113
Physical Location & Seq
Reverse (-)
3019801 .. 3025286
5486 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0038800.1

Sequence Viewer

Length: 2196 bp
ATGGCAAATGGTTTAACAACAATGCACGCAAACCAATGCATGCAAGCCACTGTAGCGGAGTGGCTCAAGGTGCCTGTCCAAGGGATTAAAAGGTTTGGAGAAGAAATGAGGCCGGTAAAGCTGACTACAAAAGTTTTTGGCTACGCCCCAGCAAAAAATGATTTTCTATTTGAAAAGCACCTTCAAAACTACATTTTCGATATCCTTATGCAATATTCAAGAGGGAAGTCTGCTCTAGTTTTTTGCTCAACTAGAAAAGGTGCACAAGAAGCAGCACAGATACTTTCTCAGACAGTCATGGCCTTTGGTCATTCAAATACATTCATTAAAAGCAGAGAACAGCAAGAGAGGCTAAGGGAAGCTTCATTGTCATGCAGTGACAAACAAATGCAATCTTATATGATTTATGCTGTTGGTTATCACAATGGTGGCCTTTTCCTCAAGGATCGTAATCTCATTGGAAGTCTTTTCCTTAAGGTTTGTGAAGAAACAAAGAAAAAGGAGTCTACATGGAAATTGACGGATCTGCACTACTACAGTATATGTCTTGTCTGTACATCAAGGCTCTATTTGAAACAAATGTGCCAGATGAGTGGGAGGGCAGGTCTGCCACCATCTGATGATACCGGAATGGTTATAATCATGACAAGAAGAGATATGAAAGTTAATGAGTTATCGCGACATCAGATGATATGGACTGATGAAGATGGTTTTCTGTTGAAACCACTAGGGATACAGCTCAGGCGCAATGAGAAGAAGCTTCTAAATGACATAAACACTGATAAAGATGGTCGACTTCGCTTTCACATTCTTGGTGACAAAGGGAAGCGAAAAAAACGTATTCAAACCAGAGAAGAAAAGATATTTCTTTTGGCTAATGACTGCTTGAGTGGTGATCCTTCGGCTCATGATTTATCCCTTACCCAGGATATGAACCCCATATGCTCAAATGGCTGTAGAATTGTCAGATGCATGAAAGAATTTTTTATTTACCAAAAGAATTACAAAGGAGCCTTGAACTTGATGCTTTTGGCGAAATCTATGTATCAAAAACTCTGGGATGACAGTCCATACTTGCTGAAACAATTACCAGGGATTGGAATGGTGACTGCAAAGGCACTACATTCGATGGGAGTTAAATCATTTGAGACACTAGCTGAGGCTGATCCTAGGAGAATTGAGATAGTCACTGGTCGAAAATACCCATTTGGGAACCATATAAAAGAGTCTCTACTGTCTCTACCTCCAAAGGTCGAGTTGAAAGTTGAGGAAACTGAATGCCAGGGGCAAGGGAAATTGAAGCTAGCGGTAACACTGACTAGGCTATCACAGACGCTCCAATCAACAAAACGACATTATGCTGATATGATTGTAGGTTCAGAAGAAGATAACCTGATTCTCTTTCATGAGAAAATAAGAGTTGACGAATTCTCGAGCCCCTATAGCGCAACAGTTCTCCTGTCAAATCCCCAACAAGGAAAGCTGACTGTTAAGGCTGATCTTATATTTGAAGAATACATTGGTATTGATCTAAACCGGGAGCTTATATTAATGAAGGAAAGCAATCTAAGTGCAAATACCAAACGAGGAAAAAAAGCACCCTCTCTTCCTCTCCCTGAGGAAGTATGTATCATAGAAGATGATACTTATGAAGATCCAAGTGAAGTGCTTCCAAACTCCACGAAATCCAAAAGCGTAGATAGTCCCATGCCCAGTTTCAAGCTTCTAAATGAAGACTCTGAAGAAGATGAGGTTGCTGACAAAGTTCATGAAGATGAGATTGCTGCCAAAGTTCAAAATGATGACAAAGTTGCGACACAATATACAGTATTTGACCACATACCTGAAAAGGCAAAGAATTTCCCTGTCTTGGTGTCATCAAATAGTGTGCTTCCTCCATCATCAAAGCCCTTGGTATTGGCAAGGAAACGTGCTCGTGAGAAGAAGCTTGGACCGGAAAGTGGAGTAGAGGTTCTGGAAGAATTAGAATGGAATAAAGTTCCAAGAAGCACACTAAGCAATCCGACCAAGCAGTACACATTTCCTCTCCCTTTCTCTAGATCTAAAGATGTAATTTTGACGACAAGAGATGGAAGCGGAAGTCCATCTACTTTGATCTTCATTAAAACTGGGAATGAGAGGTTTAGGAAAAGAAAGGGCGACAATAGTGATTGCAGTTTGATCGTTTTTGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001101 GO:0001666 GO:0002376 GO:0002682 GO:0002831 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006355 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0009266 GO:0009408 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009625 GO:0009627 GO:0009628 GO:0009682 GO:0009719 GO:0009725 GO:0009751 GO:0009814 GO:0009862 GO:0009863 GO:0009889 GO:0009891 GO:0009893 GO:0009966 GO:0009987 GO:0010033 GO:0010112 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0010646 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031348 GO:0032101 GO:0032870 GO:0035690 GO:0036293 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0044424 GO:0044464 GO:0045087 GO:0045088 GO:0045893 GO:0045935 GO:0046677 GO:0048518 GO:0048519 GO:0048522 GO:0048583 GO:0048585 GO:0050776 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0060255 GO:0065007 GO:0070482 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0080027 GO:0080090 GO:0080134 GO:0098542 GO:1901698 GO:1901700 GO:1901701 GO:1902680 GO:1903506 GO:1903508 GO:2000022 GO:2000031 GO:2000112 GO:2001023 GO:2001038 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04075 map04075
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 BTB DUF3420 NPR1_like_C

Protein Analysis

731

Amino Acids

82.91

Weight (kDa)

8.87

Isoelectric Point (pI)

47.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Sec63 PF02889 245 - 512 5.4e-31 Sec63 Brl domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 638
Acc36I ACCTGC 1 cut(s) 593
AccB1I GGYRCC 1 cut(s) 70
AccB7I CCANNNNNTGG 1 cut(s) 1097
AccI GTMKAC 2 cut(s) 506, 793
AccII CGCG 1 cut(s) 679
AciI CCGC 3 cut(s) 56, 1307, 2097
AclWI GGATC 5 cut(s) 453, 531, 890, 1160, 1649
AcsI RAATTY 3 cut(s) 980, 1427, 1858
AcuI CTGAAG 1 cut(s) 1761
AfaI GTAC 2 cut(s) 556, 2036
AfiI CCNNNNNNNGG 6 cut(s) 80, 925, 1097, 1475, 1870, 1961
AflII CTTAAG 1 cut(s) 473
AjnI CCWGG 3 cut(s) 924, 1090, 1281
AjuI GAANNNNNNNTTGG 2 cut(s) 1503, 1535
AleI CACNNNNGTG 1 cut(s) 426
AloI GAACNNNNNNTCC 2 cut(s) 1956, 1988
Alw21I GWGCWC 2 cut(s) 265, 1936
Alw26I GTCTC 3 cut(s) 1142, 1233, 1242
Alw44I GTGCAC 1 cut(s) 261
AlwI GGATC 5 cut(s) 453, 531, 890, 1160, 1649
Ama87I CYCGRG 1 cut(s) 1432
AoxI GGCC 3 cut(s) 110, 300, 430
ApaLI GTGCAC 1 cut(s) 261
ApeKI GCWGC 2 cut(s) 272, 1784
ApoI RAATTY 3 cut(s) 980, 1427, 1858
AseI ATTAAT 1 cut(s) 1550
Asp700I GAANNNNTTC 1 cut(s) 1668
AspA2I CCTAGG 1 cut(s) 1169
AspLEI GCGC 2 cut(s) 747, 1448
AspS9I GGNCC 1 cut(s) 1952
AsuC2I CCSGG 1 cut(s) 1538
AsuHPI GGTGA 3 cut(s) 827, 905, 1117
AsuNHI GCTAGC 1 cut(s) 1303
AvaI CYCGRG 1 cut(s) 1432
AvaII GGWCC 1 cut(s) 1952
AvrII CCTAGG 1 cut(s) 1169
AxyI CCTNAGG 1 cut(s) 1617
BaeGI GKGCMC 1 cut(s) 265
BanI GGYRCC 1 cut(s) 70
BanII GRGCYC 1 cut(s) 1439
BarI GAAGNNNNNNTAC 2 cut(s) 2092, 2124
BauI CACGAG 1 cut(s) 1935
BbsI GAAGAC 1 cut(s) 1740
Bbv12I GWGCWC 2 cut(s) 265, 1936
BbvCI CCTCAGC 1 cut(s) 1158
BbvI GCAGC 2 cut(s) 284, 1771
BccI CCATC 7 cut(s) 622, 701, 782, 1123, 1906, 2084, 2113
BcgI CGANNNNNNTGC 3 cut(s) 1107, 1141, 2164
BciT130I CCWGG 3 cut(s) 926, 1092, 1283
BciVI GTATCC 1 cut(s) 726
BcnI CCSGG 1 cut(s) 1538
BcoDI GTCTC 3 cut(s) 1142, 1233, 1242
BfaI CTAG 8 cut(s) 236, 252, 728, 1154, 1170, 1304, 1320, 2058
BfmI CTRYAG 4 cut(s) 51, 535, 955, 1441
BfrI CTTAAG 1 cut(s) 473
BfuAI ACCTGC 1 cut(s) 593
BfuI GTATCC 1 cut(s) 726
BglII AGATCT 1 cut(s) 2060
BisI GCNGC 2 cut(s) 273, 1785
BlnI CCTAGG 1 cut(s) 1169
BlsI GCNGC 2 cut(s) 274, 1786
Bme1390I CCNGG 4 cut(s) 926, 1092, 1283, 1538
Bme18I GGWCC 1 cut(s) 1952
BmeT110I CYCGRG 1 cut(s) 1432
BmgT120I GGNCC 1 cut(s) 1952
BmiI GGNNCC 3 cut(s) 72, 1012, 1214
BmrFI CCNGG 4 cut(s) 926, 1092, 1283, 1538
BmrI ACTGGG 2 cut(s) 1707, 2139
BmsI GCATC 2 cut(s) 959, 1014
BmtI GCTAGC 1 cut(s) 1307
BmuI ACTGGG 2 cut(s) 1707, 2139
BpiI GAAGAC 1 cut(s) 1740
Bpu10I CCTNAGC 3 cut(s) 353, 740, 1158
BpuEI CTTGAG 3 cut(s) 50, 425, 907
BpuMI CCSGG 1 cut(s) 1538
BsaBI GATNNNNATC 1 cut(s) 450
BsaJI CCNNGG 6 cut(s) 79, 924, 1091, 1169, 1282, 1911
BsaWI WCCGGW 2 cut(s) 626, 1954
BsaXI ACNNNNNCTCC 6 cut(s) 589, 619, 1320, 1350, 1956, 1986
Bsc4I CCNNNNNNNGG 6 cut(s) 80, 925, 1097, 1475, 1870, 1961
Bse118I RCCGGY 1 cut(s) 112
Bse1I ACTGG 3 cut(s) 1195, 1713, 2134
Bse21I CCTNAGG 1 cut(s) 1617
Bse3DI GCAATG 1 cut(s) 754
Bse8I GATNNNNATC 1 cut(s) 450
BseBI CCWGG 3 cut(s) 926, 1092, 1283
BseDI CCNNGG 6 cut(s) 79, 924, 1091, 1169, 1282, 1911
BseGI GGATG 1 cut(s) 1066
BseJI GATNNNNATC 1 cut(s) 450
BseLI CCNNNNNNNGG 6 cut(s) 80, 925, 1097, 1475, 1870, 1961
BseMI GCAATG 1 cut(s) 754
BseMII CTCAG 4 cut(s) 302, 754, 1149, 1608
BseNI ACTGG 3 cut(s) 1195, 1713, 2134
BseSI GKGCMC 1 cut(s) 265
BseXI GCAGC 2 cut(s) 284, 1771
BseYI CCCAGC 1 cut(s) 148
BsgI GTGCAG 1 cut(s) 512
Bsh1236I CGCG 1 cut(s) 679
BshFI GGCC 3 cut(s) 112, 302, 432
BshNI GGYRCC 1 cut(s) 70
BsiHKAI GWGCWC 2 cut(s) 265, 1936
BsiHKCI CYCGRG 1 cut(s) 1432
BsiSI CCGG 4 cut(s) 113, 627, 1537, 1955
BslFI GGGAC 1 cut(s) 1689
BslI CCNNNNNNNGG 6 cut(s) 80, 925, 1097, 1475, 1870, 1961
BsmAI GTCTC 3 cut(s) 1142, 1233, 1242
BsmFI GGGAC 1 cut(s) 1689
BsmI GAATGC 1 cut(s) 1283
BsnI GGCC 3 cut(s) 112, 302, 432
BsoBI CYCGRG 1 cut(s) 1432
Bsp1286I GDGCHC 3 cut(s) 265, 1439, 1936
Bsp1407I TGTACA 1 cut(s) 554
Bsp68I TCGCGA 1 cut(s) 679
BspACI CCGC 3 cut(s) 56, 1307, 2097
BspANI GGCC 3 cut(s) 112, 302, 432
BspCNI CTCAG 4 cut(s) 301, 753, 1150, 1609
BspFNI CGCG 1 cut(s) 679
BspHI TCATGA 4 cut(s) 642, 907, 1405, 1768
BspLI GGNNCC 3 cut(s) 72, 1012, 1214
BspMI ACCTGC 1 cut(s) 593
BspOI GCTAGC 1 cut(s) 1307
BspPI GGATC 5 cut(s) 453, 531, 890, 1160, 1649
BspT107I GGYRCC 1 cut(s) 70
BspTI CTTAAG 1 cut(s) 473
BsrDI GCAATG 1 cut(s) 754
BsrFI RCCGGY 1 cut(s) 112
BsrGI TGTACA 1 cut(s) 554
BsrI ACTGG 3 cut(s) 1195, 1713, 2134
BssAI RCCGGY 1 cut(s) 112
BssECI CCNNGG 6 cut(s) 79, 924, 1091, 1169, 1282, 1911
BssSI CACGAG 1 cut(s) 1935
BssT1I CCWWGG 3 cut(s) 79, 1169, 1911
Bst2BI CACGAG 1 cut(s) 1935
Bst2UI CCWGG 3 cut(s) 926, 1092, 1283
Bst4CI ACNGT 8 cut(s) 52, 295, 539, 1067, 1236, 1453, 1489, 1828
Bst6I CTCTTC 2 cut(s) 646, 1611
BstAFI CTTAAG 1 cut(s) 473
BstAUI TGTACA 1 cut(s) 554
BstC8I GCNNGC 4 cut(s) 27, 41, 45, 1305
BstDEI CTNAG 7 cut(s) 288, 353, 740, 1158, 1568, 1617, 2015
BstENI CCTNNNNNAGG 2 cut(s) 78, 923
BstF5I GGATG 1 cut(s) 1066
BstFNI CGCG 1 cut(s) 679
BstHHI GCGC 2 cut(s) 747, 1448
BstMAI GTCTC 3 cut(s) 1142, 1233, 1242
BstMWI GCNNNNNNNGC 8 cut(s) 53, 70, 118, 269, 349, 951, 1443, 2016
BstNI CCWGG 3 cut(s) 926, 1092, 1283
BstNSI RCATGY 1 cut(s) 43
BstSCI CCNGG 4 cut(s) 924, 1090, 1281, 1536
BstSFI CTRYAG 4 cut(s) 51, 535, 955, 1441
BstSLI GKGCMC 1 cut(s) 265
BstUI CGCG 1 cut(s) 679
BstV1I GCAGC 2 cut(s) 284, 1771
BstV2I GAAGAC 1 cut(s) 1740
BstX2I RGATCY 3 cut(s) 523, 1654, 2060
BstXI CCANNNNNNTGG 1 cut(s) 593
BstYI RGATCY 3 cut(s) 523, 1654, 2060
Bsu36I CCTNAGG 1 cut(s) 1617
BsuI GTATCC 1 cut(s) 726
BsuRI GGCC 3 cut(s) 112, 302, 432
BtsCI GGATG 1 cut(s) 1066
BtsI GCAGTG 1 cut(s) 382
BtsIMutI CAGTG 5 cut(s) 48, 382, 777, 1188, 1313
BtuMI TCGCGA 1 cut(s) 679
BveI ACCTGC 1 cut(s) 593
Cac8I GCNNGC 4 cut(s) 27, 41, 45, 1305
CciI TCATGA 4 cut(s) 642, 907, 1405, 1768
CfoI GCGC 2 cut(s) 747, 1448
Cfr10I RCCGGY 1 cut(s) 112
Cfr13I GGNCC 1 cut(s) 1952
CseI GACGC 1 cut(s) 1342
Csp6I GTAC 2 cut(s) 555, 2035
CviQI GTAC 2 cut(s) 555, 2035
DdeI CTNAG 7 cut(s) 288, 353, 740, 1158, 1568, 1617, 2015
Eam1104I CTCTTC 2 cut(s) 646, 1611
EarI CTCTTC 2 cut(s) 646, 1611
Eco130I CCWWGG 3 cut(s) 79, 1169, 1911
Eco24I GRGCYC 1 cut(s) 1439
Eco32I GATATC 1 cut(s) 202
Eco47I GGWCC 1 cut(s) 1952
Eco57I CTGAAG 1 cut(s) 1761
Eco81I CCTNAGG 1 cut(s) 1617
Eco88I CYCGRG 1 cut(s) 1432
EcoNI CCTNNNNNAGG 2 cut(s) 78, 923
EcoRI GAATTC 1 cut(s) 1427
EcoRII CCWGG 3 cut(s) 924, 1090, 1281
EcoRV GATATC 1 cut(s) 202
EcoT14I CCWWGG 3 cut(s) 79, 1169, 1911
EcoT22I ATGCAT 2 cut(s) 41, 974
EcoT38I GRGCYC 1 cut(s) 1439
ErhI CCWWGG 3 cut(s) 79, 1169, 1911
FalI AAGNNNNNCTT 2 cut(s) 346, 378
FaqI GGGAC 1 cut(s) 1689
FauNDI CATATG 1 cut(s) 941
FblI GTMKAC 2 cut(s) 506, 793
Fnu4HI GCNGC 2 cut(s) 273, 1785
FokI GGATG 1 cut(s) 1073
FriOI GRGCYC 1 cut(s) 1439
Fsp4HI GCNGC 2 cut(s) 273, 1785
FspBI CTAG 8 cut(s) 236, 252, 728, 1154, 1170, 1304, 1320, 2058
GlaI GCGC 2 cut(s) 746, 1447
GluI GCNGC 2 cut(s) 273, 1785
GsaI CCCAGC 1 cut(s) 152
HaeIII GGCC 3 cut(s) 112, 302, 432
HapII CCGG 4 cut(s) 113, 627, 1537, 1955
HgaI GACGC 1 cut(s) 1342
HhaI GCGC 2 cut(s) 747, 1448
Hin6I GCGC 2 cut(s) 745, 1446
HinP1I GCGC 2 cut(s) 745, 1446
HincII GTYRAC 2 cut(s) 794, 1423
HindII GTYRAC 2 cut(s) 794, 1423
HindIII AAGCTT 4 cut(s) 360, 758, 1721, 1946
HinfI GANTC 4 cut(s) 503, 1226, 1396, 1736
HpaII CCGG 4 cut(s) 113, 627, 1537, 1955
HphI GGTGA 3 cut(s) 827, 905, 1117
Hpy166II GTNNAC 5 cut(s) 263, 507, 794, 1423, 2037
Hpy188I TCNGA 7 cut(s) 291, 619, 687, 968, 1381, 1741, 2025
Hpy8I GTNNAC 5 cut(s) 263, 507, 794, 1423, 2037
HpyAV CCTTC 3 cut(s) 191, 909, 1549
HpyCH4III ACNGT 8 cut(s) 52, 295, 539, 1067, 1236, 1453, 1489, 1828
HpyCH4IV ACGT 2 cut(s) 838, 1930
HpyF10VI GCNNNNNNNGC 8 cut(s) 53, 70, 118, 269, 349, 951, 1443, 2016
HpyF3I CTNAG 7 cut(s) 288, 353, 740, 1158, 1568, 1617, 2015
HpySE526I ACGT 2 cut(s) 838, 1930
HspAI GCGC 2 cut(s) 745, 1446
LmnI GCTCC 3 cut(s) 1010, 1341, 1540
Lsp1109I GCAGC 2 cut(s) 284, 1771
LweI GCATC 2 cut(s) 959, 1014
MaeI CTAG 8 cut(s) 236, 252, 728, 1154, 1170, 1304, 1320, 2058
MaeII ACGT 2 cut(s) 838, 1930
MaeIII GTNAC 5 cut(s) 377, 815, 1105, 1186, 1309
MflI RGATCY 3 cut(s) 523, 1654, 2060
MhlI GDGCHC 3 cut(s) 265, 1439, 1936
MlyI GAGTC 3 cut(s) 512, 1235, 1730
MmeI TCCRAC 1 cut(s) 2048
Mph1103I ATGCAT 2 cut(s) 41, 974
MroXI GAANNNNTTC 1 cut(s) 1668
MseI TTAA 9 cut(s) 14, 87, 327, 474, 666, 1137, 1491, 1550, 2124
MslI CAYNNNNRTG 3 cut(s) 370, 426, 1773
MspCI CTTAAG 1 cut(s) 473
MspI CCGG 4 cut(s) 113, 627, 1537, 1955
MspR9I CCNGG 4 cut(s) 926, 1092, 1283, 1538
Mva1269I GAATGC 1 cut(s) 1283
MvaI CCWGG 3 cut(s) 926, 1092, 1283
MvnI CGCG 1 cut(s) 679
MwoI GCNNNNNNNGC 8 cut(s) 53, 70, 118, 269, 349, 951, 1443, 2016
NciI CCSGG 1 cut(s) 1538
NdeI CATATG 1 cut(s) 941
NheI GCTAGC 1 cut(s) 1303
NlaIV GGNNCC 3 cut(s) 72, 1012, 1214
NmuCI GTSAC 4 cut(s) 377, 815, 1105, 1186
NruI TCGCGA 1 cut(s) 679
NsiI ATGCAT 2 cut(s) 41, 974
NspI RCATGY 1 cut(s) 43
OliI CACNNNNGTG 1 cut(s) 426
PaeI GCATGC 1 cut(s) 43
PaeR7I CTCGAG 1 cut(s) 1432
PagI TCATGA 4 cut(s) 642, 907, 1405, 1768
PctI GAATGC 1 cut(s) 1283
PdmI GAANNNNTTC 1 cut(s) 1668
PfeI GAWTC 1 cut(s) 1396
PflMI CCANNNNNTGG 1 cut(s) 1097
PkrI GCNGC 2 cut(s) 274, 1786
PleI GAGTC 3 cut(s) 511, 1234, 1730
PpsI GAGTC 3 cut(s) 511, 1234, 1730
PshBI ATTAAT 1 cut(s) 1550
PsiI TTATAA 1 cut(s) 638
Psp6I CCWGG 3 cut(s) 924, 1090, 1281
PspFI CCCAGC 1 cut(s) 148
PspGI CCWGG 3 cut(s) 924, 1090, 1281
PspN4I GGNNCC 3 cut(s) 72, 1012, 1214
PspPI GGNCC 1 cut(s) 1952
PsuI RGATCY 3 cut(s) 523, 1654, 2060
RruI TCGCGA 1 cut(s) 679
RsaI GTAC 2 cut(s) 556, 2036
RsaNI GTAC 2 cut(s) 555, 2035
RseI CAYNNNNRTG 3 cut(s) 370, 426, 1773
SalI GTCGAC 1 cut(s) 792
SaqAI TTAA 9 cut(s) 14, 87, 327, 474, 666, 1137, 1491, 1550, 2124
SatI GCNGC 2 cut(s) 273, 1785
Sau96I GGNCC 1 cut(s) 1952
SchI GAGTC 3 cut(s) 512, 1235, 1730
ScrFI CCNGG 4 cut(s) 926, 1092, 1283, 1538
SduI GDGCHC 3 cut(s) 265, 1439, 1936
SfaNI GCATC 2 cut(s) 959, 1014
SfcI CTRYAG 4 cut(s) 51, 535, 955, 1441
Sfr274I CTCGAG 1 cut(s) 1432
SinI GGWCC 1 cut(s) 1952
SlaI CTCGAG 1 cut(s) 1432
SmiMI CAYNNNNRTG 3 cut(s) 370, 426, 1773
SmlI CTYRAG 5 cut(s) 65, 440, 473, 886, 1432
SmoI CTYRAG 5 cut(s) 65, 440, 473, 886, 1432
SphI GCATGC 1 cut(s) 43
SsiI CCGC 3 cut(s) 56, 1307, 2097
SspI AATATT 1 cut(s) 215
SspMI CTAG 8 cut(s) 236, 252, 728, 1154, 1170, 1304, 1320, 2058
StyD4I CCNGG 4 cut(s) 924, 1090, 1281, 1536
StyI CCWWGG 3 cut(s) 79, 1169, 1911
TaaI ACNGT 8 cut(s) 52, 295, 539, 1067, 1236, 1453, 1489, 1828
TaiI ACGT 2 cut(s) 841, 1933
TaqI TCGA 6 cut(s) 198, 793, 1127, 1195, 1254, 1433
TatI WGTACW 2 cut(s) 554, 2034
TfiI GAWTC 1 cut(s) 1396
Tru1I TTAA 9 cut(s) 14, 87, 327, 474, 666, 1137, 1491, 1550, 2124
Tru9I TTAA 9 cut(s) 14, 87, 327, 474, 666, 1137, 1491, 1550, 2124
TscAI CASTG 5 cut(s) 55, 382, 784, 1195, 1320
TseFI GTSAC 4 cut(s) 377, 815, 1105, 1186
TseI GCWGC 2 cut(s) 272, 1784
Tsp45I GTSAC 4 cut(s) 377, 815, 1105, 1186
TspGWI ACGGA 1 cut(s) 536
TspRI CASTG 5 cut(s) 55, 382, 784, 1195, 1320
Van91I CCANNNNNTGG 1 cut(s) 1097
Vha464I CTTAAG 1 cut(s) 473
VneI GTGCAC 1 cut(s) 261
VpaK11BI GGWCC 1 cut(s) 1952
VspI ATTAAT 1 cut(s) 1550
XagI CCTNNNNNAGG 2 cut(s) 78, 923
XapI RAATTY 3 cut(s) 980, 1427, 1858
XbaI TCTAGA 1 cut(s) 2057
XceI RCATGY 1 cut(s) 43
XhoI CTCGAG 1 cut(s) 1432
XmaJI CCTAGG 1 cut(s) 1169
XmiI GTMKAC 2 cut(s) 506, 793
XmnI GAANNNNTTC 1 cut(s) 1668
XspI CTAG 8 cut(s) 236, 252, 728, 1154, 1170, 1304, 1320, 2058
Zsp2I ATGCAT 2 cut(s) 41, 974
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.