Regulatory protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64280 AT4G26120 AT4G26120 |
| fragaria_vesca | FvH4_1g07810 |
| malus_domestica | MD02G1082100.v1.1 MD15G1209500.v1.1 |
| prunus_persica | Prupe.7G206800_v2.0.a1 Prupe.7G206800_v2.0.a1 Prupe.7G206800_v2.0.a1 |
| pyrus_communis | pycom02g06500 |
| rosa_chinensis | RchiOBHm_Chr2g0093681 |
| rosa_laevigata | RLG00000016428 RLG00000026474 |
| rosa_multiflora | Rmu_sc0001465.1_g000015 Rmu_sc0005268.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00147900 |
| rosa_rugosa | Rorug02G0038800 Rorug02G0038900 Rorug05G0356700 |
| rosa_samantha | Rh2AG085200 Rh2AG085300 Rh2BG085700 Rh2CG088000 Rh2CG088100 Rh2DG083500 Rh3AG094800 Rh3CG099100 Rh3DG098500 |
| rosa_wichuraiana | Rw0G013890 Rw3G008160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 837 |
| AccB1I | GGYRCC | 1 cut(s) | 837 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 433, 749 |
| AccIII | TCCGGA | 1 cut(s) | 313 |
| AciI | CCGC | 4 cut(s) | 485, 533, 653, 700 |
| AclWI | GGATC | 4 cut(s) | 228, 241, 734, 747 |
| AcuI | CTGAAG | 2 cut(s) | 608, 879 |
| AfaI | GTAC | 5 cut(s) | 809, 839, 963, 1055, 1074 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 46, 433, 749, 922 |
| AgsI | TTSAA | 6 cut(s) | 27, 35, 86, 258, 385, 664 |
| AjnI | CCWGG | 1 cut(s) | 539 |
| AluBI | AGCT | 6 cut(s) | 146, 469, 620, 650, 758, 1171 |
| AluI | AGCT | 6 cut(s) | 146, 469, 620, 650, 758, 1171 |
| Alw21I | GWGCWC | 1 cut(s) | 910 |
| Alw26I | GTCTC | 1 cut(s) | 446 |
| AlwI | GGATC | 4 cut(s) | 228, 241, 734, 747 |
| Aor13HI | TCCGGA | 1 cut(s) | 313 |
| AoxI | GGCC | 1 cut(s) | 1163 |
| ApeKI | GCWGC | 4 cut(s) | 299, 466, 523, 650 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 938 |
| Asp718I | GGTACC | 1 cut(s) | 837 |
| AspLEI | GCGC | 1 cut(s) | 415 |
| AsuHPI | GGTGA | 3 cut(s) | 416, 794, 995 |
| AsuII | TTCGAA | 2 cut(s) | 373, 1190 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 791, 824 |
| BamHI | GGATCC | 2 cut(s) | 233, 739 |
| BanI | GGYRCC | 1 cut(s) | 837 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 673, 705 |
| BauI | CACGAG | 1 cut(s) | 1152 |
| BbsI | GAAGAC | 1 cut(s) | 678 |
| Bbv12I | GWGCWC | 1 cut(s) | 910 |
| BbvI | GCAGC | 4 cut(s) | 286, 478, 510, 637 |
| BccI | CCATC | 2 cut(s) | 602, 974 |
| BceAI | ACGGC | 1 cut(s) | 1013 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 398, 432 |
| BciT130I | CCWGG | 1 cut(s) | 541 |
| BciVI | GTATCC | 1 cut(s) | 327 |
| BcoDI | GTCTC | 1 cut(s) | 446 |
| BfuI | GTATCC | 1 cut(s) | 327 |
| BisI | GCNGC | 5 cut(s) | 300, 467, 524, 534, 651 |
| BlsI | GCNGC | 5 cut(s) | 301, 468, 525, 535, 652 |
| BmcAI | AGTACT | 2 cut(s) | 963, 1074 |
| Bme1390I | CCNGG | 1 cut(s) | 541 |
| BmiI | GGNNCC | 5 cut(s) | 235, 503, 549, 741, 839 |
| BmrFI | CCNGG | 1 cut(s) | 541 |
| BmsI | GCATC | 3 cut(s) | 184, 436, 1154 |
| BpiI | GAAGAC | 1 cut(s) | 678 |
| BpmI | CTGGAG | 1 cut(s) | 1008 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1167 |
| Bpu14I | TTCGAA | 2 cut(s) | 373, 1190 |
| BpuEI | CTTGAG | 3 cut(s) | 213, 233, 833 |
| Bsa29I | ATCGAT | 1 cut(s) | 1179 |
| BsaI | GGTCTC | 1 cut(s) | 446 |
| BsaJI | CCNNGG | 2 cut(s) | 591, 849 |
| BsaWI | WCCGGW | 1 cut(s) | 313 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 46, 433, 749, 922 |
| Bse1I | ACTGG | 2 cut(s) | 743, 834 |
| Bse3DI | GCAATG | 2 cut(s) | 221, 780 |
| BseAI | TCCGGA | 1 cut(s) | 313 |
| BseBI | CCWGG | 1 cut(s) | 541 |
| BseCI | ATCGAT | 1 cut(s) | 1179 |
| BseDI | CCNNGG | 2 cut(s) | 591, 849 |
| BseGI | GGATG | 5 cut(s) | 493, 601, 613, 985, 1130 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 46, 433, 749, 922 |
| BseMI | GCAATG | 2 cut(s) | 221, 780 |
| BseMII | CTCAG | 1 cut(s) | 497 |
| BseNI | ACTGG | 2 cut(s) | 743, 834 |
| BseXI | GCAGC | 4 cut(s) | 286, 478, 510, 637 |
| BsgI | GTGCAG | 1 cut(s) | 509 |
| BshFI | GGCC | 1 cut(s) | 1165 |
| BshNI | GGYRCC | 1 cut(s) | 837 |
| BshVI | ATCGAT | 1 cut(s) | 1179 |
| BsiHKAI | GWGCWC | 1 cut(s) | 910 |
| BsiSI | CCGG | 1 cut(s) | 314 |
| BslFI | GGGAC | 1 cut(s) | 573 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 46, 433, 749, 922 |
| BsmAI | GTCTC | 1 cut(s) | 446 |
| BsmFI | GGGAC | 1 cut(s) | 573 |
| BsmI | GAATGC | 1 cut(s) | 381 |
| BsnI | GGCC | 1 cut(s) | 1165 |
| Bso31I | GGTCTC | 1 cut(s) | 446 |
| Bsp119I | TTCGAA | 2 cut(s) | 373, 1190 |
| Bsp1286I | GDGCHC | 1 cut(s) | 910 |
| Bsp13I | TCCGGA | 1 cut(s) | 313 |
| Bsp19I | CCATGG | 1 cut(s) | 849 |
| BspACI | CCGC | 4 cut(s) | 485, 533, 653, 700 |
| BspANI | GGCC | 1 cut(s) | 1165 |
| BspCNI | CTCAG | 1 cut(s) | 498 |
| BspDI | ATCGAT | 1 cut(s) | 1179 |
| BspEI | TCCGGA | 1 cut(s) | 313 |
| BspLI | GGNNCC | 5 cut(s) | 235, 503, 549, 741, 839 |
| BspPI | GGATC | 4 cut(s) | 228, 241, 734, 747 |
| BspQI | GCTCTTC | 1 cut(s) | 627 |
| BspT104I | TTCGAA | 2 cut(s) | 373, 1190 |
| BspT107I | GGYRCC | 1 cut(s) | 837 |
| BspTNI | GGTCTC | 1 cut(s) | 446 |
| BsrDI | GCAATG | 2 cut(s) | 221, 780 |
| BsrI | ACTGG | 2 cut(s) | 743, 834 |
| BssECI | CCNNGG | 2 cut(s) | 591, 849 |
| BssSI | CACGAG | 1 cut(s) | 1152 |
| BssT1I | CCWWGG | 1 cut(s) | 849 |
| Bst2BI | CACGAG | 1 cut(s) | 1152 |
| Bst2UI | CCWGG | 1 cut(s) | 541 |
| Bst4CI | ACNGT | 5 cut(s) | 281, 443, 520, 912, 939 |
| Bst6I | CTCTTC | 1 cut(s) | 627 |
| BstBI | TTCGAA | 2 cut(s) | 373, 1190 |
| BstC8I | GCNNGC | 3 cut(s) | 417, 726, 771 |
| BstDEI | CTNAG | 6 cut(s) | 506, 552, 633, 902, 1076, 1167 |
| BstDSI | CCRYGG | 1 cut(s) | 849 |
| BstF5I | GGATG | 5 cut(s) | 493, 601, 613, 985, 1130 |
| BstHHI | GCGC | 1 cut(s) | 415 |
| BstMAI | GTCTC | 1 cut(s) | 446 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 905 |
| BstNI | CCWGG | 1 cut(s) | 541 |
| BstNSI | RCATGY | 1 cut(s) | 419 |
| BstSCI | CCNGG | 1 cut(s) | 539 |
| BstV1I | GCAGC | 4 cut(s) | 286, 478, 510, 637 |
| BstV2I | GAAGAC | 1 cut(s) | 678 |
| BstX2I | RGATCY | 2 cut(s) | 233, 739 |
| BstYI | RGATCY | 2 cut(s) | 233, 739 |
| Bsu15I | ATCGAT | 1 cut(s) | 1179 |
| BsuI | GTATCC | 1 cut(s) | 327 |
| BsuRI | GGCC | 1 cut(s) | 1165 |
| BsuTUI | ATCGAT | 1 cut(s) | 1179 |
| BtgI | CCRYGG | 1 cut(s) | 849 |
| BtsCI | GGATG | 5 cut(s) | 493, 601, 613, 985, 1130 |
| BtsIMutI | CAGTG | 3 cut(s) | 516, 750, 908 |
| Cac8I | GCNNGC | 3 cut(s) | 417, 726, 771 |
| CfoI | GCGC | 1 cut(s) | 415 |
| ClaI | ATCGAT | 1 cut(s) | 1179 |
| CseI | GACGC | 1 cut(s) | 626 |
| Csp6I | GTAC | 5 cut(s) | 808, 838, 962, 1054, 1073 |
| CviAII | CATG | 5 cut(s) | 416, 428, 850, 976, 1057 |
| CviQI | GTAC | 5 cut(s) | 808, 838, 962, 1054, 1073 |
| DdeI | CTNAG | 6 cut(s) | 506, 552, 633, 902, 1076, 1167 |
| Eam1104I | CTCTTC | 1 cut(s) | 627 |
| EarI | CTCTTC | 1 cut(s) | 627 |
| Eco130I | CCWWGG | 1 cut(s) | 849 |
| Eco147I | AGGCCT | 1 cut(s) | 1165 |
| Eco31I | GGTCTC | 1 cut(s) | 446 |
| Eco57I | CTGAAG | 2 cut(s) | 608, 879 |
| EcoRII | CCWGG | 1 cut(s) | 539 |
| EcoT14I | CCWWGG | 1 cut(s) | 849 |
| ErhI | CCWWGG | 1 cut(s) | 849 |
| FaeI | CATG | 5 cut(s) | 419, 431, 853, 979, 1060 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 747, 779, 1069, 1101 |
| FaqI | GGGAC | 1 cut(s) | 573 |
| FatI | CATG | 5 cut(s) | 415, 427, 849, 975, 1056 |
| Fnu4HI | GCNGC | 5 cut(s) | 300, 467, 524, 534, 651 |
| FokI | GGATG | 5 cut(s) | 500, 608, 620, 992, 1117 |
| Fsp4HI | GCNGC | 5 cut(s) | 300, 467, 524, 534, 651 |
| GlaI | GCGC | 1 cut(s) | 414 |
| GluI | GCNGC | 5 cut(s) | 300, 467, 524, 534, 651 |
| GsuI | CTGGAG | 1 cut(s) | 1008 |
| HaeIII | GGCC | 1 cut(s) | 1165 |
| HapII | CCGG | 1 cut(s) | 314 |
| HgaI | GACGC | 1 cut(s) | 626 |
| HhaI | GCGC | 1 cut(s) | 415 |
| Hin1II | CATG | 5 cut(s) | 419, 431, 853, 979, 1060 |
| Hin6I | GCGC | 1 cut(s) | 413 |
| HinP1I | GCGC | 1 cut(s) | 413 |
| HindIII | AAGCTT | 2 cut(s) | 144, 756 |
| HinfI | GANTC | 4 cut(s) | 246, 254, 350, 400 |
| HpaII | CCGG | 1 cut(s) | 314 |
| HphI | GGTGA | 3 cut(s) | 416, 794, 995 |
| Hpy188I | TCNGA | 6 cut(s) | 193, 288, 355, 595, 627, 958 |
| Hpy188III | TCNNGA | 7 cut(s) | 83, 212, 275, 314, 404, 1025, 1119 |
| HpyAV | CCTTC | 1 cut(s) | 538 |
| HpyCH4III | ACNGT | 5 cut(s) | 281, 443, 520, 912, 939 |
| HpyCH4V | TGCA | 6 cut(s) | 419, 449, 498, 526, 773, 1145 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 905 |
| HpyF3I | CTNAG | 6 cut(s) | 506, 552, 633, 902, 1076, 1167 |
| Hsp92II | CATG | 5 cut(s) | 419, 431, 853, 979, 1060 |
| HspAI | GCGC | 1 cut(s) | 413 |
| Kpn2I | TCCGGA | 1 cut(s) | 313 |
| KpnI | GGTACC | 1 cut(s) | 841 |
| LguI | GCTCTTC | 1 cut(s) | 627 |
| LmnI | GCTCC | 3 cut(s) | 288, 547, 721 |
| Lsp1109I | GCAGC | 4 cut(s) | 286, 478, 510, 637 |
| LweI | GCATC | 3 cut(s) | 184, 436, 1154 |
| MaeIII | GTNAC | 7 cut(s) | 49, 205, 305, 512, 564, 598, 993 |
| MboII | GAAGA | 6 cut(s) | 15, 614, 678, 681, 1106, 1131 |
| MflI | RGATCY | 2 cut(s) | 233, 739 |
| MhlI | GDGCHC | 1 cut(s) | 910 |
| MluCI | AATT | 4 cut(s) | 480, 493, 927, 1107 |
| MmeI | TCCRAC | 1 cut(s) | 805 |
| MnlI | CCTC | 9 cut(s) | 57, 237, 324, 382, 601, 670, 729, 957, 1144 |
| MroI | TCCGGA | 1 cut(s) | 313 |
| MroXI | GAANNNNTTC | 1 cut(s) | 938 |
| MspI | CCGG | 1 cut(s) | 314 |
| MspR9I | CCNGG | 1 cut(s) | 541 |
| Mva1269I | GAATGC | 1 cut(s) | 381 |
| MvaI | CCWGG | 1 cut(s) | 541 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 905 |
| NcoI | CCATGG | 1 cut(s) | 849 |
| NlaIII | CATG | 5 cut(s) | 419, 431, 853, 979, 1060 |
| NlaIV | GGNNCC | 5 cut(s) | 235, 503, 549, 741, 839 |
| NmuCI | GTSAC | 4 cut(s) | 49, 205, 564, 993 |
| NspI | RCATGY | 1 cut(s) | 419 |
| NspV | TTCGAA | 2 cut(s) | 373, 1190 |
| PaeI | GCATGC | 1 cut(s) | 419 |
| PceI | AGGCCT | 1 cut(s) | 1165 |
| PciSI | GCTCTTC | 1 cut(s) | 627 |
| PctI | GAATGC | 1 cut(s) | 381 |
| PdmI | GAANNNNTTC | 1 cut(s) | 938 |
| PfeI | GAWTC | 4 cut(s) | 246, 254, 350, 400 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 433, 749 |
| PkrI | GCNGC | 5 cut(s) | 301, 468, 525, 535, 652 |
| Psp6I | CCWGG | 1 cut(s) | 539 |
| PspGI | CCWGG | 1 cut(s) | 539 |
| PspN4I | GGNNCC | 5 cut(s) | 235, 503, 549, 741, 839 |
| PsuI | RGATCY | 2 cut(s) | 233, 739 |
| RsaI | GTAC | 5 cut(s) | 809, 839, 963, 1055, 1074 |
| RsaNI | GTAC | 5 cut(s) | 808, 838, 962, 1054, 1073 |
| SapI | GCTCTTC | 1 cut(s) | 627 |
| SatI | GCNGC | 5 cut(s) | 300, 467, 524, 534, 651 |
| ScaI | AGTACT | 2 cut(s) | 963, 1074 |
| ScrFI | CCNGG | 1 cut(s) | 541 |
| SduI | GDGCHC | 1 cut(s) | 910 |
| SfaNI | GCATC | 3 cut(s) | 184, 436, 1154 |
| SfuI | TTCGAA | 2 cut(s) | 373, 1190 |
| SmlI | CTYRAG | 3 cut(s) | 212, 228, 812 |
| SmoI | CTYRAG | 3 cut(s) | 212, 228, 812 |
| SphI | GCATGC | 1 cut(s) | 419 |
| Sse9I | AATT | 4 cut(s) | 480, 493, 927, 1107 |
| SseBI | AGGCCT | 1 cut(s) | 1165 |
| SsiI | CCGC | 4 cut(s) | 485, 533, 653, 700 |
| StuI | AGGCCT | 1 cut(s) | 1165 |
| StyD4I | CCNGG | 1 cut(s) | 539 |
| StyI | CCWWGG | 1 cut(s) | 849 |
| TaaI | ACNGT | 5 cut(s) | 281, 443, 520, 912, 939 |
| TaqI | TCGA | 4 cut(s) | 373, 668, 1179, 1190 |
| TasI | AATT | 4 cut(s) | 480, 493, 927, 1107 |
| TatI | WGTACW | 2 cut(s) | 961, 1072 |
| TauI | GCSGC | 1 cut(s) | 536 |
| TfiI | GAWTC | 4 cut(s) | 246, 254, 350, 400 |
| TscAI | CASTG | 3 cut(s) | 523, 750, 915 |
| TseFI | GTSAC | 4 cut(s) | 49, 205, 564, 993 |
| TseI | GCWGC | 4 cut(s) | 299, 466, 523, 650 |
| Tsp45I | GTSAC | 4 cut(s) | 49, 205, 564, 993 |
| TspDTI | ATGAA | 4 cut(s) | 812, 903, 1002, 1107 |
| TspGWI | ACGGA | 2 cut(s) | 226, 938 |
| TspRI | CASTG | 3 cut(s) | 523, 750, 915 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 433, 749 |
| XceI | RCATGY | 1 cut(s) | 419 |
| XmnI | GAANNNNTTC | 1 cut(s) | 938 |
| ZrmI | AGTACT | 2 cut(s) | 963, 1074 |