Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0013828

Physical Location & Seq

Genomic Coordinates Forward (+)

4701057 .. 4704056

Gene Structure 3000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g08840.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGGTCTCCTCCGAGGCCCAGTTCTGGGTCGTAGCCTTAACAATCCTACTGCCATGTCTATCTGTAACCGCCAAACAGACCTACATAGTTCAGATGAAGCACCATTCCAAACCCTCCTCATTTGCCACCCACAGTGATTGGTACTCCGCTAACCTCCAAGCTGTCTCATCTGACTCCTACTCTGACTCTGACGCCCTCCTTTACACCTACGACACCGCCTACCACGGCTTCGCCGCTTCTTTAGATCCCGACCAGGCCGAGACGCTTCGCCAGTCGGAATCCGTAATCGGGGTTTATGAAGATACTGTTTACAACCTCCACACCACTAGAACTCCAGAGTTTCTAGGCTTGGAAACCGCTAACGGGTTCTGGGCCGGACACTCTCTCCAGGACTTAAATCAGGCCTCCAATGACGTCATCGTCGGAGTTTTGGATACCGGGGTTTGGCCGGAGTCTAAGAGCTTCAACGACGCTGGAATGCCGGAGATCCCGTCCCGGTGGCGAGGGGAGTGCGAATCTGGTGTCGACTTCAGCCCGAAGCTATGCAACAAGAAGCTGATCGGAGCCCGGAGCTTCTCCAAAGGCTACCGCATGGCCTCCGGCGGAGGCTTCATGAAGAAACCCAGAGAGGCCGAGTCGCCTAGAGACCAGGACGGCCACGGGACCCACACTTCCAGCACTGCCGCCGGGTCGCTGGTGGCGAACGCCAGCCTGCTGGGGTACGCGAGCGGGACGGCGCGTGGGATGGCGCCCCACGCGCGTGTGGCGACTTACAAGGTGTGCTGGACATCCGGCTGCTTCGGGTCCGATATCCTCGCGGGTATGGATCGGGCCATCCTCGACGGAGTCGACGTCATGTCGTTGTCTCTCGGCGGTGGGTCCGCCCCGTATTTTAGGGACACAATCGCGATAGGAGCTTTCACCGCCATGGAGAGGGGCATTTTCGTCTCTTGCTCGGCCGGGAATAGCGGGCCGAGTAGGGCCTCATTGGCCAACACAGCTCCGTGGGTCATGACTGTTGGAGCCGGAACCTTGGACCGGGACTTCCCGGCTTACGCTGTCCTCGGAAACCAAAACAAGTTCACCGGAGTTTCACTTTACAGTGGAACCGGAATGGGGACAAAACCGGTTGGGTTATTTTACAACAAAGGAAGTAACAGCTCAAGCAATCTATGCTTGCCCGGTTCGCTTCGACCGGAGGCCGTACGTGGGAAAGTGGTCGTGTGCGACAGGGGAGTTAACGCACGTGTGGAAAAAGGTGGGGTTGTACGCGCCGCGGGTGGGGTGGGGATGATACTCGCCAACACTGCCGCTAGCGGCGAGGAAATGGTGGCTGACAGTCACTTGTTACCGGCGGTTGCTGTGGGGAGGAAAGTCGGTGACATGATAAGGGAGTATGCACAGACAGATCCGAATCCGACGGCGGTGATTAGCTTTGGTGGGACGGTGCTGAATGTAAGGCCGTCGCCGGTGGTGGCGGCGTTTAGCTCTCGGGGGCCTAATTTGGTGACTCCCCAGATCTTGAAACCCGATGTGATTGGTCCAGGGGTTAACATATTGGCTGCTTGGTCTGAGGCCATTGGGCCCACTGGGCTTGAGGAGGACACTAGGAAGAGTCAGTTCAACATTATGTCAGGTATGCATGTCATTTGCAACGGCTACATTTCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005911 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009506 GO:0012505 GO:0016787 GO:0017171 GO:0019538 GO:0030054 GO:0030312 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

557

Amino Acids

58.57

Weight (kDa)

6.14

Isoelectric Point (pI)

35.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	27 - 107	6.1e-20	Peptidase inhibitor I9
Peptidase_S8	PF00082	137 - 546	3e-27	Subtilase family
PA	PF02225	390 - 462	6.4e-12	PA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05920
fragaria_vesca	FvH4_1g08840
malus_domestica	MD02G1093500.v1.1 MD15G1218800.v1.1
prunus_persica	Prupe.7G197100_v2.0.a1
pyrus_communis	pycom02g07370 pycom15g19400
rosa_chinensis	RchiOBHm_Chr2g0095311
rosa_laevigata	RLG00000016553
rosa_multiflora	Rmu_ssc0000183.1_g000049
rosa_roxburghii	Rroxscaffold_2G00146490
rosa_rugosa	Rorug02G0049200
rosa_samantha	Rh2AG097600 Rh2BG098800 Rh2CG100900 Rh2DG098500
rosa_wichuraiana	Rw2G007360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	419
AatII	GACGTC	2 cut(s)	417, 855
AccB1I	GGYRCC	1 cut(s)	748
AccBSI	CCGCTC	1 cut(s)	729
AccI	GTMKAC	2 cut(s)	525, 849
AccII	CGCG	8 cut(s)	725, 739, 758, 760, 818, 908, 1272, 1277
AclWI	GGATC	4 cut(s)	239, 481, 834, 1403
AcoI	YGGCCR	4 cut(s)	446, 655, 957, 990
AcuI	CTGAAG	1 cut(s)	514
AcvI	CACGTG	1 cut(s)	1247
AcyI	GRCGYC	4 cut(s)	192, 414, 749, 852
AfaI	GTAC	4 cut(s)	143, 722, 1206, 1269
AflIII	ACRYGT	1 cut(s)	1246
AgeI	ACCGGT	1 cut(s)	1126
AgsI	TTSAA	3 cut(s)	466, 1525, 1624
AhdI	GACNNNNNGTC	1 cut(s)	856
AjnI	CCWGG	4 cut(s)	252, 387, 648, 1543
AleI	CACNNNNGTG	1 cut(s)	759
Alw26I	GTCTC	6 cut(s)	10, 169, 254, 639, 870, 952
AlwI	GGATC	4 cut(s)	239, 481, 834, 1403
Ama87I	CYCGRG	1 cut(s)	1491
ApaI	GGGCCC	1 cut(s)	1587
ApeKI	GCWGC	2 cut(s)	795, 1562
ArsI	GACNNNNNNTTYG	2 cut(s)	507, 539
AsiGI	ACCGGT	1 cut(s)	1126
AspLEI	GCGC	4 cut(s)	739, 751, 760, 1274
AsuC2I	CCSGG	8 cut(s)	439, 496, 568, 688, 961, 1040, 1049, 1182
AsuHPI	GGTGA	5 cut(s)	913, 1075, 1391, 1438, 1519
AsuNHI	GCTAGC	1 cut(s)	1313
AvaI	CYCGRG	1 cut(s)	1491
AvaII	GGWCC	5 cut(s)	663, 804, 879, 1036, 1541
BaeGI	GKGCMC	1 cut(s)	1587
BaeI	ACNNNNGTAYC	2 cut(s)	426, 459
BalI	TGGCCA	1 cut(s)	992
BanI	GGYRCC	1 cut(s)	748
BanII	GRGCYC	2 cut(s)	568, 1587
BbrPI	CACGTG	1 cut(s)	1247
BbvI	GCAGC	2 cut(s)	782, 1549
BccI	CCATC	2 cut(s)	739, 842
BceAI	ACGGC	6 cut(s)	241, 670, 750, 1187, 1437, 1447
BcgI	CGANNNNNNTGC	2 cut(s)	492, 526
BciT130I	CCWGG	4 cut(s)	254, 389, 650, 1545
BciVI	GTATCC	1 cut(s)	427
BcnI	CCSGG	8 cut(s)	439, 496, 568, 688, 961, 1040, 1049, 1182
BcoDI	GTCTC	6 cut(s)	10, 169, 254, 639, 870, 952
BfaI	CTAG	5 cut(s)	327, 344, 642, 1314, 1608
BfoI	RGCGCY	1 cut(s)	752
BfuI	GTATCC	1 cut(s)	427
BglI	GCCNNNNNGGC	2 cut(s)	989, 1591
BglII	AGATCT	1 cut(s)	1518
BisI	GCNGC	8 cut(s)	234, 684, 796, 1275, 1311, 1318, 1479, 1563
BlsI	GCNGC	8 cut(s)	235, 685, 797, 1276, 1312, 1319, 1480, 1564
Bme18I	GGWCC	5 cut(s)	663, 804, 879, 1036, 1541
BmeRI	GACNNNNNGTC	1 cut(s)	856
BmeT110I	CYCGRG	1 cut(s)	1491
BmrI	ACTGGG	2 cut(s)	13, 1599
BmtI	GCTAGC	1 cut(s)	1317
BmuI	ACTGGG	2 cut(s)	13, 1599
BpmI	CTGGAG	2 cut(s)	318, 371
BpuEI	CTTGAG	2 cut(s)	1147, 1616
BpuMI	CCSGG	8 cut(s)	439, 496, 568, 688, 961, 1040, 1049, 1182
BsaAI	YACGTR	2 cut(s)	1208, 1247
BsaBI	GATNNNNATC	1 cut(s)	1413
BsaHI	GRCGYC	4 cut(s)	192, 414, 749, 852
BsaI	GGTCTC	2 cut(s)	10, 639
BsaWI	WCCGGW	4 cut(s)	1085, 1109, 1126, 1195
BsaXI	ACNNNNNCTCC	8 cut(s)	316, 346, 369, 399, 476, 506, 837, 867
Bse118I	RCCGGY	3 cut(s)	1126, 1351, 1468
Bse1I	ACTGG	3 cut(s)	19, 271, 1594
Bse8I	GATNNNNATC	1 cut(s)	1413
BseBI	CCWGG	4 cut(s)	254, 389, 650, 1545
BseGI	GGATG	4 cut(s)	750, 788, 834, 1296
BseJI	GATNNNNATC	1 cut(s)	1413
BseMII	CTCAG	1 cut(s)	1563
BseNI	ACTGG	3 cut(s)	19, 271, 1594
BseRI	GAGGAG	2 cut(s)	106, 1613
BseSI	GKGCMC	1 cut(s)	1587
BseX3I	CGGCCG	1 cut(s)	957
BseXI	GCAGC	2 cut(s)	782, 1549
BseYI	CCCAGC	1 cut(s)	715
Bsh1236I	CGCG	8 cut(s)	725, 739, 758, 760, 818, 908, 1272, 1277
Bsh1285I	CGRYCG	2 cut(s)	960, 1196
BshNI	GGYRCC	1 cut(s)	748
BshTI	ACCGGT	1 cut(s)	1126
BsiEI	CGRYCG	2 cut(s)	960, 1196
BsiHKCI	CYCGRG	1 cut(s)	1491
BsiWI	CGTACG	1 cut(s)	1204
BslFI	GGGAC	7 cut(s)	478, 676, 745, 911, 1055, 1132, 1456
BsmAI	GTCTC	6 cut(s)	10, 169, 254, 639, 870, 952
BsmBI	CGTCTC	2 cut(s)	254, 952
BsmFI	GGGAC	7 cut(s)	478, 676, 745, 911, 1055, 1132, 1456
BsmI	GAATGC	1 cut(s)	483
Bso31I	GGTCTC	2 cut(s)	10, 639
BsoBI	CYCGRG	1 cut(s)	1491
Bsp120I	GGGCCC	1 cut(s)	1583
Bsp1286I	GDGCHC	2 cut(s)	568, 1587
Bsp143I	GATC	6 cut(s)	244, 486, 558, 826, 1408, 1518
Bsp19I	CCATGG	1 cut(s)	927
Bsp68I	TCGCGA	1 cut(s)	908
BspCNI	CTCAG	1 cut(s)	1564
BspFNI	CGCG	8 cut(s)	725, 739, 758, 760, 818, 908, 1272, 1277
BspHI	TCATGA	2 cut(s)	612, 1011
BspOI	GCTAGC	1 cut(s)	1317
BspPI	GGATC	4 cut(s)	239, 481, 834, 1403
BspT107I	GGYRCC	1 cut(s)	748
BspTNI	GGTCTC	2 cut(s)	10, 639
BsrBI	CCGCTC	1 cut(s)	729
BsrFI	RCCGGY	3 cut(s)	1126, 1351, 1468
BsrI	ACTGG	3 cut(s)	19, 271, 1594
BssAI	RCCGGY	3 cut(s)	1126, 1351, 1468
BssMI	GATC	6 cut(s)	244, 486, 558, 826, 1408, 1518
BssNI	GRCGYC	4 cut(s)	192, 414, 749, 852
BssT1I	CCWWGG	2 cut(s)	927, 1032
Bst2UI	CCWGG	4 cut(s)	254, 389, 650, 1545
Bst4CI	ACNGT	6 cut(s)	134, 307, 1018, 1103, 1340, 1447
Bst6I	CTCTTC	1 cut(s)	1607
BstACI	GRCGYC	4 cut(s)	192, 414, 749, 852
BstAPI	GCANNNNNTGC	1 cut(s)	1173
BstBAI	YACGTR	2 cut(s)	1208, 1247
BstC8I	GCNNGC	6 cut(s)	709, 713, 727, 971, 1178, 1315
BstDEI	CTNAG	2 cut(s)	456, 1572
BstDSI	CCRYGG	5 cut(s)	223, 658, 927, 1004, 1275
BstF5I	GGATG	4 cut(s)	750, 788, 834, 1296
BstFNI	CGCG	8 cut(s)	725, 739, 758, 760, 818, 908, 1272, 1277
BstH2I	RGCGCY	1 cut(s)	752
BstHHI	GCGC	4 cut(s)	739, 751, 760, 1274
BstKTI	GATC	6 cut(s)	247, 489, 561, 829, 1411, 1521
BstMAI	GTCTC	6 cut(s)	10, 169, 254, 639, 870, 952
BstMBI	GATC	6 cut(s)	244, 486, 558, 826, 1408, 1518
BstMCI	CGRYCG	2 cut(s)	960, 1196
BstNI	CCWGG	4 cut(s)	254, 389, 650, 1545
BstNSI	RCATGY	1 cut(s)	1646
BstSLI	GKGCMC	1 cut(s)	1587
BstUI	CGCG	8 cut(s)	725, 739, 758, 760, 818, 908, 1272, 1277
BstV1I	GCAGC	2 cut(s)	782, 1549
BstX2I	RGATCY	4 cut(s)	244, 486, 1408, 1518
BstXI	CCANNNNNNTGG	1 cut(s)	715
BstYI	RGATCY	4 cut(s)	244, 486, 1408, 1518
BstZI	CGGCCG	1 cut(s)	957
BsuI	GTATCC	1 cut(s)	427
BtgI	CCRYGG	5 cut(s)	223, 658, 927, 1004, 1275
BtsCI	GGATG	4 cut(s)	750, 788, 834, 1296
BtsI	GCAGTG	2 cut(s)	678, 1305
BtsIMutI	CAGTG	5 cut(s)	139, 678, 1108, 1305, 1587
BtuMI	TCGCGA	1 cut(s)	908
Cac8I	GCNNGC	6 cut(s)	709, 713, 727, 971, 1178, 1315
CciI	TCATGA	2 cut(s)	612, 1011
CfoI	GCGC	4 cut(s)	739, 751, 760, 1274
Cfr10I	RCCGGY	3 cut(s)	1126, 1351, 1468
Cfr42I	CCGCGG	1 cut(s)	1278
CseI	GACGC	3 cut(s)	200, 271, 479
Csp6I	GTAC	4 cut(s)	142, 721, 1205, 1268
CspAI	ACCGGT	1 cut(s)	1126
CspCI	CAANNNNNGTGG	4 cut(s)	119, 154, 1576, 1611
CviAII	CATG	8 cut(s)	54, 592, 613, 856, 928, 1012, 1384, 1643
CviQI	GTAC	4 cut(s)	142, 721, 1205, 1268
DdeI	CTNAG	2 cut(s)	456, 1572
DinI	GGCGCC	1 cut(s)	750
DpnI	GATC	6 cut(s)	246, 488, 560, 828, 1410, 1520
DpnII	GATC	6 cut(s)	244, 486, 558, 826, 1408, 1518
DrdI	GACNNNNNNGTC	1 cut(s)	419
DriI	GACNNNNNGTC	1 cut(s)	856
DseDI	GACNNNNNNGTC	1 cut(s)	419
EaeI	YGGCCR	4 cut(s)	446, 655, 957, 990
EagI	CGGCCG	1 cut(s)	957
Eam1104I	CTCTTC	1 cut(s)	1607
Eam1105I	GACNNNNNGTC	1 cut(s)	856
EarI	CTCTTC	1 cut(s)	1607
EciI	GGCGGA	2 cut(s)	618, 871
EclXI	CGGCCG	1 cut(s)	957
Eco130I	CCWWGG	2 cut(s)	927, 1032
Eco147I	AGGCCT	1 cut(s)	404
Eco24I	GRGCYC	2 cut(s)	568, 1587
Eco31I	GGTCTC	2 cut(s)	10, 639
Eco32I	GATATC	1 cut(s)	811
Eco47I	GGWCC	5 cut(s)	663, 804, 879, 1036, 1541
Eco52I	CGGCCG	1 cut(s)	957
Eco57I	CTGAAG	1 cut(s)	514
Eco72I	CACGTG	1 cut(s)	1247
Eco88I	CYCGRG	1 cut(s)	1491
EcoO109I	RGGNCCY	3 cut(s)	663, 981, 1496
EcoRII	CCWGG	4 cut(s)	252, 387, 648, 1543
EcoRV	GATATC	1 cut(s)	811
EcoT14I	CCWWGG	2 cut(s)	927, 1032
EcoT22I	ATGCAT	1 cut(s)	1644
EcoT38I	GRGCYC	2 cut(s)	568, 1587
EgeI	GGCGCC	1 cut(s)	750
EheI	GGCGCC	1 cut(s)	750
ErhI	CCWWGG	2 cut(s)	927, 1032
Esp3I	CGTCTC	2 cut(s)	254, 952
FaeI	CATG	8 cut(s)	57, 595, 616, 859, 931, 1015, 1387, 1646
FaqI	GGGAC	7 cut(s)	478, 676, 745, 911, 1055, 1132, 1456
FatI	CATG	8 cut(s)	53, 591, 612, 855, 927, 1011, 1383, 1642
FauI	CCCGC	4 cut(s)	722, 811, 962, 1270
FblI	GTMKAC	2 cut(s)	525, 849
Fnu4HI	GCNGC	8 cut(s)	234, 684, 796, 1275, 1311, 1318, 1479, 1563
FokI	GGATG	4 cut(s)	757, 775, 821, 1303
FriOI	GRGCYC	2 cut(s)	568, 1587
Fsp4HI	GCNGC	8 cut(s)	234, 684, 796, 1275, 1311, 1318, 1479, 1563
FspBI	CTAG	5 cut(s)	327, 344, 642, 1314, 1608
GlaI	GCGC	4 cut(s)	738, 750, 759, 1273
GluI	GCNGC	8 cut(s)	234, 684, 796, 1275, 1311, 1318, 1479, 1563
GsaI	CCCAGC	1 cut(s)	719
GsuI	CTGGAG	2 cut(s)	318, 371
HaeII	RGCGCY	1 cut(s)	752
HgaI	GACGC	3 cut(s)	200, 271, 479
HhaI	GCGC	4 cut(s)	739, 751, 760, 1274
Hin1I	GRCGYC	4 cut(s)	192, 414, 749, 852
Hin1II	CATG	8 cut(s)	57, 595, 616, 859, 931, 1015, 1387, 1646
Hin6I	GCGC	4 cut(s)	737, 749, 758, 1272
HinP1I	GCGC	4 cut(s)	737, 749, 758, 1272
HincII	GTYRAC	4 cut(s)	526, 850, 1240, 1552
HindII	GTYRAC	4 cut(s)	526, 850, 1240, 1552
HpaI	GTTAAC	2 cut(s)	1240, 1552
HphI	GGTGA	5 cut(s)	913, 1075, 1391, 1438, 1519
Hpy166II	GTNNAC	6 cut(s)	310, 526, 850, 1083, 1240, 1552
Hpy188III	TCNNGA	6 cut(s)	248, 335, 613, 907, 1012, 1522
Hpy8I	GTNNAC	6 cut(s)	310, 526, 850, 1083, 1240, 1552
Hpy99I	CGWCG	6 cut(s)	425, 473, 845, 854, 1423, 1468
HpyCH4III	ACNGT	6 cut(s)	134, 307, 1018, 1103, 1340, 1447
HpyCH4IV	ACGT	4 cut(s)	414, 852, 1207, 1246
HpyCH4V	TGCA	4 cut(s)	546, 1400, 1642, 1653
HpyF3I	CTNAG	2 cut(s)	456, 1572
HpySE526I	ACGT	4 cut(s)	414, 852, 1207, 1246
Hsp92I	GRCGYC	4 cut(s)	192, 414, 749, 852
Hsp92II	CATG	8 cut(s)	57, 595, 616, 859, 931, 1015, 1387, 1646
HspAI	GCGC	4 cut(s)	737, 749, 758, 1272
KasI	GGCGCC	1 cut(s)	748
KflI	GGGWCCC	1 cut(s)	663
KspAI	GTTAAC	2 cut(s)	1240, 1552
KspI	CCGCGG	1 cut(s)	1278
Kzo9I	GATC	6 cut(s)	244, 486, 558, 826, 1408, 1518
LmnI	GCTCC	5 cut(s)	563, 570, 914, 1006, 1022
Lsp1109I	GCAGC	2 cut(s)	782, 1549
MaeI	CTAG	5 cut(s)	327, 344, 642, 1314, 1608
MaeII	ACGT	4 cut(s)	414, 852, 1207, 1246
MaeIII	GTNAC	6 cut(s)	64, 1154, 1340, 1347, 1379, 1507
MalI	GATC	6 cut(s)	246, 488, 560, 828, 1410, 1520
MbiI	CCGCTC	1 cut(s)	729
MboI	GATC	6 cut(s)	244, 486, 558, 826, 1408, 1518
MboII	GAAGA	3 cut(s)	311, 628, 1624
MflI	RGATCY	4 cut(s)	244, 486, 1408, 1518
MhlI	GDGCHC	2 cut(s)	568, 1587
MlsI	TGGCCA	1 cut(s)	992
MluCI	AATT	1 cut(s)	1501
MluNI	TGGCCA	1 cut(s)	992
Mly113I	GGCGCC	1 cut(s)	749
MlyI	GAGTC	7 cut(s)	167, 179, 461, 644, 855, 1504, 1624
MmeI	TCCRAC	4 cut(s)	255, 403, 1000, 1442
Mox20I	TGGCCA	1 cut(s)	992
Mph1103I	ATGCAT	1 cut(s)	1644
MscI	TGGCCA	1 cut(s)	992
MseI	TTAA	5 cut(s)	38, 395, 1239, 1551, 1669
MslI	CAYNNNNRTG	2 cut(s)	759, 926
Msp20I	TGGCCA	1 cut(s)	992
MspA1I	CMGCKG	1 cut(s)	1277
Mva1269I	GAATGC	1 cut(s)	483
MvaI	CCWGG	4 cut(s)	254, 389, 650, 1545
MvnI	CGCG	8 cut(s)	725, 739, 758, 760, 818, 908, 1272, 1277
NarI	GGCGCC	1 cut(s)	749
NciI	CCSGG	8 cut(s)	439, 496, 568, 688, 961, 1040, 1049, 1182
NcoI	CCATGG	1 cut(s)	927
NdeII	GATC	6 cut(s)	244, 486, 558, 826, 1408, 1518
NheI	GCTAGC	1 cut(s)	1313
NlaIII	CATG	8 cut(s)	57, 595, 616, 859, 931, 1015, 1387, 1646
NmeAIII	GCCGAG	5 cut(s)	283, 658, 849, 935, 999
NmuCI	GTSAC	3 cut(s)	1340, 1379, 1507
NruI	TCGCGA	1 cut(s)	908
NsiI	ATGCAT	1 cut(s)	1644
NspI	RCATGY	1 cut(s)	1646
OliI	CACNNNNGTG	1 cut(s)	759
PagI	TCATGA	2 cut(s)	612, 1011
PceI	AGGCCT	1 cut(s)	404
PcsI	WCGNNNNNNNCGW	3 cut(s)	698, 846, 849
PctI	GAATGC	1 cut(s)	483
PfeI	GAWTC	3 cut(s)	278, 515, 1414
Pfl23II	CGTACG	1 cut(s)	1204
PflFI	GACNNNGTC	1 cut(s)	845
PfoI	TCCNGGA	1 cut(s)	387
PinAI	ACCGGT	1 cut(s)	1126
PkrI	GCNGC	8 cut(s)	235, 685, 797, 1276, 1312, 1319, 1480, 1564
PleI	GAGTC	7 cut(s)	167, 179, 460, 643, 854, 1504, 1623
PluTI	GGCGCC	1 cut(s)	752
PmaCI	CACGTG	1 cut(s)	1247
PmlI	CACGTG	1 cut(s)	1247
PpsI	GAGTC	7 cut(s)	167, 179, 460, 643, 854, 1504, 1623
Ppu21I	YACGTR	2 cut(s)	1208, 1247
PpuMI	RGGWCCY	1 cut(s)	663
Psp5II	RGGWCCY	1 cut(s)	663
Psp6I	CCWGG	4 cut(s)	252, 387, 648, 1543
PspCI	CACGTG	1 cut(s)	1247
PspFI	CCCAGC	1 cut(s)	715
PspGI	CCWGG	4 cut(s)	252, 387, 648, 1543
PspLI	CGTACG	1 cut(s)	1204
PspOMI	GGGCCC	1 cut(s)	1583
PspPPI	RGGWCCY	1 cut(s)	663
PsuI	RGATCY	4 cut(s)	244, 486, 1408, 1518
PsyI	GACNNNGTC	1 cut(s)	845
RruI	TCGCGA	1 cut(s)	908
RsaI	GTAC	4 cut(s)	143, 722, 1206, 1269
RsaNI	GTAC	4 cut(s)	142, 721, 1205, 1268
RseI	CAYNNNNRTG	2 cut(s)	759, 926
SacII	CCGCGG	1 cut(s)	1278
SalI	GTCGAC	2 cut(s)	524, 848
SaqAI	TTAA	5 cut(s)	38, 395, 1239, 1551, 1669
SatI	GCNGC	8 cut(s)	234, 684, 796, 1275, 1311, 1318, 1479, 1563
Sau3AI	GATC	6 cut(s)	244, 486, 558, 826, 1408, 1518
SchI	GAGTC	7 cut(s)	167, 179, 461, 644, 855, 1504, 1624
SduI	GDGCHC	2 cut(s)	568, 1587
SfiI	GGCCNNNNNGGCC	1 cut(s)	989
SfoI	GGCGCC	1 cut(s)	750
Sfr303I	CCGCGG	1 cut(s)	1278
SgrAI	CRCCGGYG	1 cut(s)	1468
SgrBI	CCGCGG	1 cut(s)	1278
SinI	GGWCC	5 cut(s)	663, 804, 879, 1036, 1541
SmiMI	CAYNNNNRTG	2 cut(s)	759, 926
SmlI	CTYRAG	2 cut(s)	1162, 1595
SmoI	CTYRAG	2 cut(s)	1162, 1595
Sse9I	AATT	1 cut(s)	1501
SseBI	AGGCCT	1 cut(s)	404
SspDI	GGCGCC	1 cut(s)	748
SspMI	CTAG	5 cut(s)	327, 344, 642, 1314, 1608
StuI	AGGCCT	1 cut(s)	404
StyI	CCWWGG	2 cut(s)	927, 1032
TaaI	ACNGT	6 cut(s)	134, 307, 1018, 1103, 1340, 1447
TaiI	ACGT	4 cut(s)	417, 855, 1210, 1249
TaqI	TCGA	4 cut(s)	525, 840, 849, 1192
TasI	AATT	1 cut(s)	1501
TauI	GCSGC	6 cut(s)	236, 686, 1277, 1313, 1320, 1481
TfiI	GAWTC	3 cut(s)	278, 515, 1414
Tru1I	TTAA	5 cut(s)	38, 395, 1239, 1551, 1669
Tru9I	TTAA	5 cut(s)	38, 395, 1239, 1551, 1669
TscAI	CASTG	5 cut(s)	139, 685, 1108, 1312, 1594
TseFI	GTSAC	3 cut(s)	1340, 1379, 1507
TseI	GCWGC	2 cut(s)	795, 1562
Tsp45I	GTSAC	3 cut(s)	1340, 1379, 1507
TspDTI	ATGAA	4 cut(s)	110, 312, 601, 629
TspGWI	ACGGA	3 cut(s)	271, 858, 993
TspRI	CASTG	5 cut(s)	139, 685, 1108, 1312, 1594
Tth111I	GACNNNGTC	1 cut(s)	845
VpaK11BI	GGWCC	5 cut(s)	663, 804, 879, 1036, 1541
XceI	RCATGY	1 cut(s)	1646
XmiI	GTMKAC	2 cut(s)	525, 849
XspI	CTAG	5 cut(s)	327, 344, 642, 1314, 1608
ZraI	GACGTC	2 cut(s)	415, 853
Zsp2I	ATGCAT	1 cut(s)	1644

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.