Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0013828

Physical Location & Seq

Genomic Coordinates Forward (+)

7617572 .. 7620180

Gene Structure 2609 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000016553

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGCCTCCTCTGAGGCCCAGTTCTGGTTCGTAGCTTTAACACTTCTTCTGCCATGTCTATCCGTAACCGCCAAACAGACCTACATAGTTCAGATGAAGCACCATTCCAAACCTTCCTCATTCGCCACCCACAGTGACTGGTACTCCGCCAACCTCCAAGCTCTCTCCTCTGACTCTGACTCTGACTCTGACGCCCTCCTCTACACCTACGACGCCGCCTACCACGGCTTCGCCGCTTCTCTAGATCCCGAACAGGCCGACACTCTGCGACAGTCGGAATCTGTAATCGGGGTATTCGAGGATACTTTATACAACCTCCACACCACACGAACACCCGAGTTTCTGGGCCTGGACACCGCTAATGGGCTCTGGGCCGGACACTCGCTCCAGGACCTGAACCAGGCCTCCAATGACGTCATCGTCGGAGTGCTGGACACCGGAGTCTGGCCGGAGTCCAAGAGCTTCAACGATGCGGGAATGCCAGAGATCCCGTCCAGGTGGCGGGGACAGTGCGAGTCGGGAACCGATTTCAGCCCCTCTCTCTGCAACAAGAAGCTGATCGGAGCCCGGAGCTTTTCTAAAGGCTACCGCATGGCCTCCGGCGGAAGCTACATGAAGAAACCGAAAGAGGCCGAGTCGCCGAGAGACCAAGACGGCCACGGGACCCACACGTCCAGCACCGCCGCCGGCTCGCTGGTGGCGAACGCCAGCCTTCTCGGTTACGCCAGCGGGACGGCGCGTGGGATGGCGCCCCACGCGCGGGTGGCCACCTACAAGGTCTGCTGGACCACGGGTTGCTTCGGGTCCGATATCCTCGCGGGTATGGATCGGGCCATCCTCGATGGAGTTGATGTGCTGTCGCTCTCTTTGGGCGGCGGGTCGGCCCCGTACTTTAGGGACACAATCGCAATAGGCGCTTTCACTGCCATGGAGAGGGGCATTTTCGTCTCTTGCTCGGCCGGAAATAGCGGGCCAAGTAGGGCCTCATTGGCCAACACAGCTCCGTGGATCATGACGGTTGGAGCCGGAACCTTGGACCGGGACTTCCCGGCTTTCGCTTTGCTCGGAAACCAAAACCGATTCACCGGTGTGTCACTTTACAGTGGCACCGGAATGGGGTCAAAACCGGTGGGGTTGGTTTACAACAAGGGGACTAACGGCTCCAGCAATCTGTGCTTGCCCGGTTCGCTCCAACCGGAGTCGGTACGTGGGAAAGTGGTGATTTGCGACAGGGGAGTTAACGCACGTGTGGAGAAAGGTGGAGTTGTACTCGCCGCGGGTGGGGTTGGGATGATACTCGCCAACACCGCCGCGAGCGGAGAGGAAATGGTGGCGGACAGTCACTTGTTACCGGCTGTTGCGGTTGGGAGGAAAGTGGGTGACTTGATAAGGCAGTATGCACAGTCAGATCCGAATCCGACGGCGGTTATTAGCTTTGGTGGGACGGTGCTGAATGTGCGGCCGTCGCCGGTTGTGGCGGCGTTTAGCTCTCGTGGGCCAAATTTGGTTACTCCCCAGATCTTGAAGCCCGATGTGATTGGTCCAGGGGTTAACATCTTGGCTGCATGGTCAGAGGCTATTGGGCCCACTGGGCTTGCGGAGGACACTAGGAAGAGTCGGTTCAACATCATGTCAGGTACATCTATGTCATGCCCACACATAAGTGGGCTTGCAGCATTGCTCAAAGCGGCCCATCCCAATTGGAGCCCAAGTGCAATCAAATCCGCTCTCATGACTACAGCCTATACACATGACAACACCATGTCTCCTCTCCGTGATGCTGCCGGTGGCACATTTTCTAATCCGTGGGCACATGGTTCTGGCCATGTCGATCCCTCGAAAGCCGTCACGCCAGGTCTTGTATACGACATTTCGAGCGATGACTATGTTGCATTTTTGTGCTCGTTGGACTACACCATCGATCACGTCCAAGCCATTGCTAAGAGAAATGTTACATGCACAAGAAAGTACTCTGATCCTGGACAACTCAACTACCCTTCGTTCTCAGTTGTGTTTGGGAACAAGAGGGTTGTGAGATACAGTCGAGAATTGACAAATGTAGGGACTGCAGGTTCTTTATACAAGGTCATTGTGAGCGGACCACCCGGAGTGAAGACTATTGTTAAACCCTCGAGGCTTTTCTTTGCAACTGTAGGGGAGAAGAAGAAGTACACAGTCACCTTTGTGTCTGCCAAGGGCGGCATTAGAACATCAAGGTCAGAATTTGGTTCGATCGTGTGGGCAAACCCCGTACACCTCGTTAAGAGCCCAGTTGCTTTTGCATGGACGCTGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005911 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009506 GO:0012505 GO:0016787 GO:0017171 GO:0019538 GO:0030054 GO:0030312 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

766

Amino Acids

80.77

Weight (kDa)

8.58

Isoelectric Point (pI)

34.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	27 - 107	1.7e-19	Peptidase inhibitor I9
Peptidase_S8	PF00082	137 - 585	1.8e-45	Subtilase family
PA	PF02225	380 - 462	2.7e-11	PA domain
fn3_6	PF17766	662 - 759	3.4e-23	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05920
fragaria_vesca	FvH4_1g08840
malus_domestica	MD02G1093500.v1.1 MD15G1218800.v1.1
prunus_persica	Prupe.7G197100_v2.0.a1
pyrus_communis	pycom02g07370 pycom15g19400
rosa_chinensis	RchiOBHm_Chr2g0095311
rosa_laevigata	RLG00000016553
rosa_multiflora	Rmu_ssc0000183.1_g000049
rosa_roxburghii	Rroxscaffold_2G00146490
rosa_rugosa	Rorug02G0049200
rosa_samantha	Rh2AG097600 Rh2BG098800 Rh2CG100900 Rh2DG098500
rosa_wichuraiana	Rw2G007360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	419, 440, 670
AatII	GACGTC	1 cut(s)	417
AbsI	CCTCGAGG	1 cut(s)	2131
Acc36I	ACCTGC	1 cut(s)	2060
AccB1I	GGYRCC	2 cut(s)	748, 1106
AccBSI	CCGCTC	3 cut(s)	1317, 1727, 2097
AccI	GTMKAC	1 cut(s)	1863
AccII	CGCG	6 cut(s)	739, 758, 760, 818, 1277, 1313
AclWI	GGATC	7 cut(s)	239, 481, 834, 1016, 1403, 1826, 1970
AcoI	YGGCCR	7 cut(s)	446, 655, 765, 957, 990, 1460, 1822
AcsI	RAATTY	2 cut(s)	1501, 2222
AcvI	CACGTG	1 cut(s)	1247
AcyI	GRCGYC	4 cut(s)	192, 213, 414, 749
AfaI	GTAC	8 cut(s)	143, 890, 1206, 1269, 1639, 1970, 2171, 2253
AflIII	ACRYGT	2 cut(s)	669, 1246
AgeI	ACCGGT	2 cut(s)	1085, 1126
AgsI	TTSAA	3 cut(s)	466, 1525, 1624
AjiI	CACGTC	2 cut(s)	672, 1927
AjnI	CCWGG	7 cut(s)	348, 387, 399, 494, 1543, 1852, 1978
AleI	CACNNNNGTG	3 cut(s)	1088, 1662, 2183
AloI	GAACNNNNNNTCC	4 cut(s)	389, 421, 2056, 2088
AluBI	AGCT	9 cut(s)	35, 161, 462, 556, 573, 609, 1001, 1434, 1488
AluI	AGCT	9 cut(s)	35, 161, 462, 556, 573, 609, 1001, 1434, 1488
Alw21I	GWGCWC	1 cut(s)	1904
Alw26I	GTCTC	3 cut(s)	639, 952, 1770
AlwI	GGATC	7 cut(s)	239, 481, 834, 1016, 1403, 1826, 1970
AlwNI	CAGNNNCTG	2 cut(s)	138, 394
Ama87I	CYCGRG	2 cut(s)	335, 2131
ApaI	GGGCCC	1 cut(s)	1587
ApeKI	GCWGC	3 cut(s)	1562, 1673, 1781
ApoI	RAATTY	2 cut(s)	1501, 2222
AsiGI	ACCGGT	2 cut(s)	1085, 1126
AspLEI	GCGC	4 cut(s)	739, 751, 760, 917
AsuC2I	CCSGG	5 cut(s)	568, 1040, 1049, 1182, 2106
AsuHPI	GGTGA	4 cut(s)	1075, 1231, 1391, 2170
AvaI	CYCGRG	2 cut(s)	335, 2131
AvaII	GGWCC	7 cut(s)	391, 663, 786, 804, 1036, 1541, 2099
BaeGI	GKGCMC	2 cut(s)	1587, 1813
BalI	TGGCCA	3 cut(s)	767, 992, 1824
BanI	GGYRCC	2 cut(s)	748, 1106
BanII	GRGCYC	5 cut(s)	369, 568, 1587, 1709, 2270
BarI	GAAGNNNNNNTAC	2 cut(s)	2153, 2185
BauI	CACGAG	1 cut(s)	1491
BbrPI	CACGTG	1 cut(s)	1247
BbsI	GAAGAC	1 cut(s)	2120
Bbv12I	GWGCWC	1 cut(s)	1904
BbvI	GCAGC	3 cut(s)	1549, 1685, 1768
BccI	CCATC	5 cut(s)	739, 836, 842, 1701, 1925
BceAI	ACGGC	7 cut(s)	241, 670, 750, 1174, 1437, 1447, 1829
BciT130I	CCWGG	7 cut(s)	350, 389, 401, 496, 1545, 1854, 1980
BciVI	GTATCC	1 cut(s)	295
BcnI	CCSGG	5 cut(s)	568, 1040, 1049, 1182, 2106
BcoDI	GTCTC	3 cut(s)	639, 952, 1770
BfaI	CTAG	2 cut(s)	242, 1608
BfmI	CTRYAG	3 cut(s)	1737, 2067, 2151
BfoI	RGCGCY	2 cut(s)	752, 918
BfuAI	ACCTGC	1 cut(s)	2060
BfuI	GTATCC	1 cut(s)	295
BglI	GCCNNNNNGGC	2 cut(s)	989, 1591
BglII	AGATCT	1 cut(s)	1518
BmcAI	AGTACT	1 cut(s)	1970
Bme18I	GGWCC	7 cut(s)	391, 663, 786, 804, 1036, 1541, 2099
BmeT110I	CYCGRG	2 cut(s)	335, 2131
BmgBI	CACGTC	2 cut(s)	672, 1927
BmrI	ACTGGG	3 cut(s)	13, 1599, 2264
BmsI	GCATC	2 cut(s)	460, 1768
BmuI	ACTGGG	3 cut(s)	13, 1599, 2264
BpiI	GAAGAC	1 cut(s)	2120
BplI	GAGNNNNNCTC	2 cut(s)	1254, 1286
BpmI	CTGGAG	2 cut(s)	371, 1147
BpuMI	CCSGG	5 cut(s)	568, 1040, 1049, 1182, 2106
Bsa29I	ATCGAT	1 cut(s)	1920
BsaAI	YACGTR	2 cut(s)	1208, 1247
BsaBI	GATNNNNATC	1 cut(s)	1413
BsaHI	GRCGYC	4 cut(s)	192, 213, 414, 749
BsaI	GGTCTC	1 cut(s)	639
BsaWI	WCCGGW	5 cut(s)	437, 1085, 1109, 1126, 1195
Bse118I	RCCGGY	6 cut(s)	686, 1085, 1126, 1351, 1468, 1784
Bse1I	ACTGG	4 cut(s)	19, 143, 1594, 2270
Bse3DI	GCAATG	2 cut(s)	1676, 1935
Bse8I	GATNNNNATC	1 cut(s)	1413
BseBI	CCWGG	7 cut(s)	350, 389, 401, 496, 1545, 1854, 1980
BseCI	ATCGAT	1 cut(s)	1920
BseGI	GGATG	4 cut(s)	750, 834, 1296, 1693
BseJI	GATNNNNATC	1 cut(s)	1413
BseMI	GCAATG	2 cut(s)	1676, 1935
BseMII	CTCAG	1 cut(s)	2019
BseNI	ACTGG	4 cut(s)	19, 143, 1594, 2270
BseRI	GAGGAG	3 cut(s)	157, 188, 1758
BseSI	GKGCMC	2 cut(s)	1587, 1813
BseX3I	CGGCCG	2 cut(s)	957, 1460
BseXI	GCAGC	3 cut(s)	1549, 1685, 1768
Bsh1236I	CGCG	6 cut(s)	739, 758, 760, 818, 1277, 1313
Bsh1285I	CGRYCG	3 cut(s)	960, 1463, 2235
BshNI	GGYRCC	2 cut(s)	748, 1106
BshTI	ACCGGT	2 cut(s)	1085, 1126
BshVI	ATCGAT	1 cut(s)	1920
BsiEI	CGRYCG	3 cut(s)	960, 1463, 2235
BsiHKAI	GWGCWC	1 cut(s)	1904
BsiHKCI	CYCGRG	2 cut(s)	335, 2131
BslFI	GGGAC	8 cut(s)	519, 676, 745, 911, 1055, 1165, 1456, 2077
BsmAI	GTCTC	3 cut(s)	639, 952, 1770
BsmBI	CGTCTC	1 cut(s)	952
BsmFI	GGGAC	8 cut(s)	519, 676, 745, 911, 1055, 1165, 1456, 2077
BsmI	GAATGC	1 cut(s)	483
Bso31I	GGTCTC	1 cut(s)	639
BsoBI	CYCGRG	2 cut(s)	335, 2131
Bsp120I	GGGCCC	1 cut(s)	1583
Bsp1286I	GDGCHC	7 cut(s)	369, 568, 1587, 1709, 1813, 1904, 2270
Bsp19I	CCATGG	1 cut(s)	927
BspCNI	CTCAG	2 cut(s)	4, 2018
BspDI	ATCGAT	1 cut(s)	1920
BspFNI	CGCG	6 cut(s)	739, 758, 760, 818, 1277, 1313
BspHI	TCATGA	2 cut(s)	1011, 1731
BspMAI	CTGCAG	1 cut(s)	2071
BspMI	ACCTGC	1 cut(s)	2060
BspPI	GGATC	7 cut(s)	239, 481, 834, 1016, 1403, 1826, 1970
BspT107I	GGYRCC	2 cut(s)	748, 1106
BspTNI	GGTCTC	1 cut(s)	639
BsrBI	CCGCTC	3 cut(s)	1317, 1727, 2097
BsrDI	GCAATG	2 cut(s)	1676, 1935
BsrFI	RCCGGY	6 cut(s)	686, 1085, 1126, 1351, 1468, 1784
BsrI	ACTGG	4 cut(s)	19, 143, 1594, 2270
BssAI	RCCGGY	6 cut(s)	686, 1085, 1126, 1351, 1468, 1784
BssNAI	GTATAC	1 cut(s)	1864
BssNI	GRCGYC	4 cut(s)	192, 213, 414, 749
BssSI	CACGAG	1 cut(s)	1491
BssT1I	CCWWGG	3 cut(s)	927, 1032, 2193
Bst1107I	GTATAC	1 cut(s)	1864
Bst2BI	CACGAG	1 cut(s)	1491
Bst2UI	CCWGG	7 cut(s)	350, 389, 401, 496, 1545, 1854, 1980
Bst6I	CTCTTC	1 cut(s)	1607
BstACI	GRCGYC	4 cut(s)	192, 213, 414, 749
BstAPI	GCANNNNNTGC	1 cut(s)	1173
BstBAI	YACGTR	2 cut(s)	1208, 1247
BstC8I	GCNNGC	9 cut(s)	688, 692, 709, 727, 971, 1178, 1315, 1596, 1671
BstDEI	CTNAG	3 cut(s)	12, 1941, 2005
BstDSI	CCRYGG	7 cut(s)	223, 658, 789, 927, 1004, 1275, 1805
BstENI	CCTNNNNNAGG	1 cut(s)	398
BstF5I	GGATG	4 cut(s)	750, 834, 1296, 1693
BstFNI	CGCG	6 cut(s)	739, 758, 760, 818, 1277, 1313
BstH2I	RGCGCY	2 cut(s)	752, 918
BstHHI	GCGC	4 cut(s)	739, 751, 760, 917
BstMAI	GTCTC	3 cut(s)	639, 952, 1770
BstMCI	CGRYCG	3 cut(s)	960, 1463, 2235
BstNI	CCWGG	7 cut(s)	350, 389, 401, 496, 1545, 1854, 1980
BstNSI	RCATGY	1 cut(s)	1959
BstSFI	CTRYAG	3 cut(s)	1737, 2067, 2151
BstSLI	GKGCMC	2 cut(s)	1587, 1813
BstUI	CGCG	6 cut(s)	739, 758, 760, 818, 1277, 1313
BstV1I	GCAGC	3 cut(s)	1549, 1685, 1768
BstV2I	GAAGAC	1 cut(s)	2120
BstX2I	RGATCY	4 cut(s)	244, 486, 1408, 1518
BstYI	RGATCY	4 cut(s)	244, 486, 1408, 1518
BstZ17I	GTATAC	1 cut(s)	1864
BstZI	CGGCCG	2 cut(s)	957, 1460
Bsu15I	ATCGAT	1 cut(s)	1920
BsuI	GTATCC	1 cut(s)	295
BsuTUI	ATCGAT	1 cut(s)	1920
BtgI	CCRYGG	7 cut(s)	223, 658, 789, 927, 1004, 1275, 1805
BtgZI	GCGATG	1 cut(s)	1893
BtrI	CACGTC	2 cut(s)	672, 1927
BtsCI	GGATG	4 cut(s)	750, 834, 1296, 1693
BtsI	GCAGTG	1 cut(s)	921
BtsIMutI	CAGTG	5 cut(s)	139, 515, 921, 1108, 1587
BveI	ACCTGC	1 cut(s)	2060
Cac8I	GCNNGC	9 cut(s)	688, 692, 709, 727, 971, 1178, 1315, 1596, 1671
CaiI	CAGNNNCTG	2 cut(s)	138, 394
CciI	TCATGA	2 cut(s)	1011, 1731
CfoI	GCGC	4 cut(s)	739, 751, 760, 917
Cfr10I	RCCGGY	6 cut(s)	686, 1085, 1126, 1351, 1468, 1784
Cfr42I	CCGCGG	1 cut(s)	1278
ClaI	ATCGAT	1 cut(s)	1920
CseI	GACGC	2 cut(s)	200, 221
Csp6I	GTAC	8 cut(s)	142, 889, 1205, 1268, 1638, 1969, 2170, 2252
CspAI	ACCGGT	2 cut(s)	1085, 1126
CspCI	CAANNNNNGTGG	4 cut(s)	1110, 1145, 1576, 1611
CviQI	GTAC	8 cut(s)	142, 889, 1205, 1268, 1638, 1969, 2170, 2252
DdeI	CTNAG	3 cut(s)	12, 1941, 2005
DinI	GGCGCC	1 cut(s)	750
DrdI	GACNNNNNNGTC	3 cut(s)	419, 440, 670
DseDI	GACNNNNNNGTC	3 cut(s)	419, 440, 670
EaeI	YGGCCR	7 cut(s)	446, 655, 765, 957, 990, 1460, 1822
EagI	CGGCCG	2 cut(s)	957, 1460
Eam1104I	CTCTTC	1 cut(s)	1607
EarI	CTCTTC	1 cut(s)	1607
EciI	GGCGGA	3 cut(s)	136, 618, 1349
EclXI	CGGCCG	2 cut(s)	957, 1460
Eco130I	CCWWGG	3 cut(s)	927, 1032, 2193
Eco147I	AGGCCT	1 cut(s)	404
Eco24I	GRGCYC	5 cut(s)	369, 568, 1587, 1709, 2270
Eco31I	GGTCTC	1 cut(s)	639
Eco32I	GATATC	1 cut(s)	811
Eco47I	GGWCC	7 cut(s)	391, 663, 786, 804, 1036, 1541, 2099
Eco52I	CGGCCG	2 cut(s)	957, 1460
Eco72I	CACGTG	1 cut(s)	1247
Eco88I	CYCGRG	2 cut(s)	335, 2131
EcoNI	CCTNNNNNAGG	1 cut(s)	398
EcoO109I	RGGNCCY	3 cut(s)	391, 663, 981
EcoRII	CCWGG	7 cut(s)	348, 387, 399, 494, 1543, 1852, 1978
EcoRV	GATATC	1 cut(s)	811
EcoT14I	CCWWGG	3 cut(s)	927, 1032, 2193
EcoT38I	GRGCYC	5 cut(s)	369, 568, 1587, 1709, 2270
EgeI	GGCGCC	1 cut(s)	750
EheI	GGCGCC	1 cut(s)	750
ErhI	CCWWGG	3 cut(s)	927, 1032, 2193
Esp3I	CGTCTC	1 cut(s)	952
FaqI	GGGAC	8 cut(s)	519, 676, 745, 911, 1055, 1165, 1456, 2077
FauI	CCCGC	8 cut(s)	466, 495, 722, 753, 811, 869, 962, 1270
FblI	GTMKAC	1 cut(s)	1863
FokI	GGATG	4 cut(s)	757, 821, 1303, 1680
FriOI	GRGCYC	5 cut(s)	369, 568, 1587, 1709, 2270
FspBI	CTAG	2 cut(s)	242, 1608
GlaI	GCGC	4 cut(s)	738, 750, 759, 916
GsuI	CTGGAG	2 cut(s)	371, 1147
HaeII	RGCGCY	2 cut(s)	752, 918
HgaI	GACGC	2 cut(s)	200, 221
HhaI	GCGC	4 cut(s)	739, 751, 760, 917
Hin1I	GRCGYC	4 cut(s)	192, 213, 414, 749
Hin6I	GCGC	4 cut(s)	737, 749, 758, 915
HinP1I	GCGC	4 cut(s)	737, 749, 758, 915
HincII	GTYRAC	2 cut(s)	1240, 1552
HindII	GTYRAC	2 cut(s)	1240, 1552
HpaI	GTTAAC	2 cut(s)	1240, 1552
HphI	GGTGA	4 cut(s)	1075, 1231, 1391, 2170
Hpy166II	GTNNAC	6 cut(s)	1141, 1240, 1552, 1864, 2172, 2254
Hpy188III	TCNNGA	7 cut(s)	242, 248, 519, 1012, 1522, 1732, 2045
Hpy8I	GTNNAC	6 cut(s)	1141, 1240, 1552, 1864, 2172, 2254
Hpy99I	CGWCG	4 cut(s)	215, 425, 1423, 1468
HpyAV	CCTTC	3 cut(s)	123, 722, 2007
HpyCH4IV	ACGT	5 cut(s)	414, 671, 1207, 1246, 1926
HpyF3I	CTNAG	3 cut(s)	12, 1941, 2005
HpySE526I	ACGT	5 cut(s)	414, 671, 1207, 1246, 1926
Hsp92I	GRCGYC	4 cut(s)	192, 213, 414, 749
HspAI	GCGC	4 cut(s)	737, 749, 758, 915
KasI	GGCGCC	1 cut(s)	748
KflI	GGGWCCC	1 cut(s)	663
KroI	GCCGGC	1 cut(s)	686
KroNI	GCCGGC	1 cut(s)	688
KspAI	GTTAAC	2 cut(s)	1240, 1552
KspI	CCGCGG	1 cut(s)	1278
LmnI	GCTCC	8 cut(s)	390, 563, 570, 1006, 1022, 1166, 1194, 1704
Lsp1109I	GCAGC	3 cut(s)	1549, 1685, 1768
LweI	GCATC	2 cut(s)	460, 1768
MaeI	CTAG	2 cut(s)	242, 1608
MaeII	ACGT	5 cut(s)	414, 671, 1207, 1246, 1926
MbiI	CCGCTC	3 cut(s)	1317, 1727, 2097
MboII	GAAGA	6 cut(s)	38, 628, 1624, 2125, 2173, 2176
MfeI	CAATTG	1 cut(s)	1699
MflI	RGATCY	4 cut(s)	244, 486, 1408, 1518
MhlI	GDGCHC	7 cut(s)	369, 568, 1587, 1709, 1813, 1904, 2270
MlsI	TGGCCA	3 cut(s)	767, 992, 1824
MluCI	AATT	4 cut(s)	1501, 1699, 2048, 2222
MluNI	TGGCCA	3 cut(s)	767, 992, 1824
Mly113I	GGCGCC	1 cut(s)	749
MlyI	GAGTC	9 cut(s)	167, 173, 179, 450, 461, 524, 644, 1208, 1624
MmeI	TCCRAC	6 cut(s)	255, 403, 1000, 1216, 1442, 1887
Mox20I	TGGCCA	3 cut(s)	767, 992, 1824
MroNI	GCCGGC	1 cut(s)	686
MscI	TGGCCA	3 cut(s)	767, 992, 1824
MseI	TTAA	5 cut(s)	38, 1239, 1551, 2124, 2262
MslI	CAYNNNNRTG	6 cut(s)	926, 1088, 1112, 1662, 1897, 2183
Msp20I	TGGCCA	3 cut(s)	767, 992, 1824
MspA1I	CMGCKG	2 cut(s)	729, 1277
MunI	CAATTG	1 cut(s)	1699
Mva1269I	GAATGC	1 cut(s)	483
MvaI	CCWGG	7 cut(s)	350, 389, 401, 496, 1545, 1854, 1980
MvnI	CGCG	6 cut(s)	739, 758, 760, 818, 1277, 1313
NaeI	GCCGGC	1 cut(s)	688
NarI	GGCGCC	1 cut(s)	749
NciI	CCSGG	5 cut(s)	568, 1040, 1049, 1182, 2106
NcoI	CCATGG	1 cut(s)	927
NgoMIV	GCCGGC	1 cut(s)	686
NmeAIII	GCCGAG	3 cut(s)	658, 666, 935
NmuCI	GTSAC	6 cut(s)	134, 1092, 1340, 1379, 1846, 2176
NspI	RCATGY	1 cut(s)	1959
OliI	CACNNNNGTG	3 cut(s)	1088, 1662, 2183
PaeR7I	CTCGAG	1 cut(s)	2131
PagI	TCATGA	2 cut(s)	1011, 1731
PceI	AGGCCT	1 cut(s)	404
PcsI	WCGNNNNNNNCGW	2 cut(s)	294, 698
PctI	GAATGC	1 cut(s)	483
PdiI	GCCGGC	1 cut(s)	688
PfeI	GAWTC	3 cut(s)	278, 1080, 1414
PfoI	TCCNGGA	2 cut(s)	387, 1978
PinAI	ACCGGT	2 cut(s)	1085, 1126
Ple19I	CGATCG	1 cut(s)	2235
PleI	GAGTC	9 cut(s)	167, 173, 179, 449, 460, 523, 643, 1207, 1623
PluTI	GGCGCC	1 cut(s)	752
PmaCI	CACGTG	1 cut(s)	1247
PmlI	CACGTG	1 cut(s)	1247
PpsI	GAGTC	9 cut(s)	167, 173, 179, 449, 460, 523, 643, 1207, 1623
Ppu21I	YACGTR	2 cut(s)	1208, 1247
PpuMI	RGGWCCY	2 cut(s)	391, 663
Psp5II	RGGWCCY	2 cut(s)	391, 663
Psp6I	CCWGG	7 cut(s)	348, 387, 399, 494, 1543, 1852, 1978
PspCI	CACGTG	1 cut(s)	1247
PspGI	CCWGG	7 cut(s)	348, 387, 399, 494, 1543, 1852, 1978
PspOMI	GGGCCC	1 cut(s)	1583
PspPPI	RGGWCCY	2 cut(s)	391, 663
PspXI	VCTCGAGB	1 cut(s)	2131
PstI	CTGCAG	1 cut(s)	2071
PstNI	CAGNNNCTG	2 cut(s)	138, 394
PsuI	RGATCY	4 cut(s)	244, 486, 1408, 1518
PvuI	CGATCG	1 cut(s)	2235
RsaI	GTAC	8 cut(s)	143, 890, 1206, 1269, 1639, 1970, 2171, 2253
RsaNI	GTAC	8 cut(s)	142, 889, 1205, 1268, 1638, 1969, 2170, 2252
RseI	CAYNNNNRTG	6 cut(s)	926, 1088, 1112, 1662, 1897, 2183
SacII	CCGCGG	1 cut(s)	1278
SaqAI	TTAA	5 cut(s)	38, 1239, 1551, 2124, 2262
ScaI	AGTACT	1 cut(s)	1970
SchI	GAGTC	9 cut(s)	167, 173, 179, 450, 461, 524, 644, 1208, 1624
SduI	GDGCHC	7 cut(s)	369, 568, 1587, 1709, 1813, 1904, 2270
SfaNI	GCATC	2 cut(s)	460, 1768
SfcI	CTRYAG	3 cut(s)	1737, 2067, 2151
SfiI	GGCCNNNNNGGCC	1 cut(s)	989
SfoI	GGCGCC	1 cut(s)	750
Sfr274I	CTCGAG	1 cut(s)	2131
Sfr303I	CCGCGG	1 cut(s)	1278
SgrAI	CRCCGGYG	1 cut(s)	1085
SgrBI	CCGCGG	1 cut(s)	1278
SinI	GGWCC	7 cut(s)	391, 663, 786, 804, 1036, 1541, 2099
SlaI	CTCGAG	1 cut(s)	2131
SmiMI	CAYNNNNRTG	6 cut(s)	926, 1088, 1112, 1662, 1897, 2183
SmlI	CTYRAG	1 cut(s)	2131
SmoI	CTYRAG	1 cut(s)	2131
Sse9I	AATT	4 cut(s)	1501, 1699, 2048, 2222
SseBI	AGGCCT	1 cut(s)	404
SspDI	GGCGCC	1 cut(s)	748
SspMI	CTAG	2 cut(s)	242, 1608
StuI	AGGCCT	1 cut(s)	404
StyI	CCWWGG	3 cut(s)	927, 1032, 2193
TaiI	ACGT	5 cut(s)	417, 674, 1210, 1249, 1929
TaqI	TCGA	9 cut(s)	297, 840, 1830, 1838, 1874, 1920, 2044, 2132, 2231
TasI	AATT	4 cut(s)	1501, 1699, 2048, 2222
TatI	WGTACW	3 cut(s)	1267, 1968, 2169
TfiI	GAWTC	3 cut(s)	278, 1080, 1414
Tru1I	TTAA	5 cut(s)	38, 1239, 1551, 2124, 2262
Tru9I	TTAA	5 cut(s)	38, 1239, 1551, 2124, 2262
TscAI	CASTG	5 cut(s)	139, 515, 928, 1108, 1594
TseFI	GTSAC	6 cut(s)	134, 1092, 1340, 1379, 1846, 2176
TseI	GCWGC	3 cut(s)	1562, 1673, 1781
Tsp45I	GTSAC	6 cut(s)	134, 1092, 1340, 1379, 1846, 2176
TspDTI	ATGAA	2 cut(s)	110, 629
TspGWI	ACGGA	4 cut(s)	52, 993, 1763, 1794
TspRI	CASTG	5 cut(s)	139, 515, 928, 1108, 1594
VpaK11BI	GGWCC	7 cut(s)	391, 663, 786, 804, 1036, 1541, 2099
XagI	CCTNNNNNAGG	1 cut(s)	398
XapI	RAATTY	2 cut(s)	1501, 2222
XbaI	TCTAGA	1 cut(s)	241
XceI	RCATGY	1 cut(s)	1959
XhoI	CTCGAG	1 cut(s)	2131
XmiI	GTMKAC	1 cut(s)	1863
XspI	CTAG	2 cut(s)	242, 1608
ZraI	GACGTC	1 cut(s)	415
ZrmI	AGTACT	1 cut(s)	1970

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.