Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000183.1

Orthogroup ID

OG0013828

Physical Location & Seq

Genomic Coordinates Forward (+)

244623 .. 250038

Gene Structure 5416 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000183.1_g000049.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2522 bp

atggaggcccaacatcaggggaaggaagcccaaggcgaggctaccagtttcacccaaccaaggatcatggaggcccaacatgaggggaaggaagctcgaggcgaggctaccagtttcacccaaccaaggagcatggaggcccaaaaccaggtgaaggaagttcgaggcgagactatcagtttcacccaacaagggagctggacgcccgacgttaagtggaggaagcccaaggcaagtttatcagtctcatcctacaagggagtagacaacaaacggtcatccttccatatattctcaagaaggaatgataaaggccttcctgcctcactcaagaagaaaatagcggtgtccaaggccaagtttccaatcttactcaaggaggtcaaaggaagaggaccatcgaggtcttacttcaaagagaagaagaggattggagaagccgaggaggagaagaagaaggaaaggggttgctggttgcagccttgcaggttgctcgctgtgttctgtgttccggactcggaagtgctccaagtctccaaccccaagttcggcggtggccggttgggcttgaaaggctggagacggagctcagagaccggagattggacccttgacgtttctcatgatgaaccggttctggtcatcgagaaacttgactcagacttgggtcacctgacctctagatccggtccggcccatcaccttcaccaccaggtcggggtattcgaggatactttatacaacctccacaccacacgaacacccgagtttctgggcctggaaaccgctaacgggctctgggccggacactcgctccaggacctgaaccaggcctccaatgacgtcatcgtcggagtgctggacaccggagtctggccggagtccaagagcttcaacgatgcgggaatgccagagatcccgtccaggtggaggggacagtgcgagtcgggaaccgatttcagcccctctctctgcaacaagaagctgatcggagcccggagcttttctaaaggctaccgcatggcctccggcggaagctacatgaagaaaccgaaggaggccgagtcgccgagggaccaagacggccacgggacccacacgtccagcaccgccgccgggtcgctggtggcgaacgccagcctgctcggttacgcgagcgggacggcgcgtgggatggcgcctcacgcgcgggtggccacctacaaggtctgctggaccacgggttgcttcgggtccgatatcctcgcgggtatggatcgggccatcctcgacggagttgatgtgctgtcgctctctttgggaggcgggtccgccccgtactttagggacacaatcgcaataggagctttcaccgccatggagaggggcattttcgtctcttgctcggccggaaatagcgggccaagtagggcctcattggccaacactgccccgtggatcatgacggttggagccggaaccttggaccgggacttcccggctttcgctttgctcggaaaccaaaagcggttcaccggcgtgtcactttacagcggcaccggaatggggtcaaaaccggtggggttggtttacaacaaggggactaacggctccagcaatctgtgcttgcccggttcgctccaaccggagtcggtacgtgggaaagtggtaatttgcgacaggggagttaacgcacgtgtggagaaaggtggagttgtacgcgccgcgggtggggttgggatgatactcgccaacaccgccgcgagcggagaggaaatggtggcggacagtcacttgttaccggctgttgcggttgggaggaaagtgggtgacttgataaggcagtatgcacagtcagatccgaatccgacggcggtgattagctttggtgggacggtgctgaatgtgcggccgtcgccggttgtggcggcgtttagctctcgtgggccaaatttggttactccccagatcttgaagcccgatgtgattggtccaggggttaacatcttggctggatggtcagaggctattgggcccactgggcttgcggaggactctaggaagagtcagttcaacatcatgtcaggtacatctatgtcatgcccacacataagtgggcttgcagcattgctcaaagcggcccatcccaattggagcccaagtgcaatcaaatccgctctcatgactacagcgtacacacatgacaacaccatgtctcctctccgtgatgctgccggtggcacattttcgaatccgtgggcacatggttctggccatgtcgatccctcgaaagccgtcacgccaggtcttgtatacgacatttcgagcgatgactatgttgcatttttgtgctcgctggactacaccatcgatcatgtccaagccattgctaagagaaacgttacatgcgcaagaaagtactctaatcctggacaactcaactacccttcattctcagttgtgtttgggaacaagagggttgtgagatacagtcgagaattgacaaatgtagggactgcaggttctttatacaaggtcattgt

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005911 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009506 GO:0012505 GO:0016787 GO:0017171 GO:0019538 GO:0030054 GO:0030312 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

841

Amino Acids

89.81

Weight (kDa)

9.23

Isoelectric Point (pI)

36.86

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05920
fragaria_vesca	FvH4_1g08840
malus_domestica	MD02G1093500.v1.1 MD15G1218800.v1.1
prunus_persica	Prupe.7G197100_v2.0.a1
pyrus_communis	pycom02g07370 pycom15g19400
rosa_chinensis	RchiOBHm_Chr2g0095311
rosa_laevigata	RLG00000016553
rosa_multiflora	Rmu_ssc0000183.1_g000049
rosa_roxburghii	Rroxscaffold_2G00146490
rosa_rugosa	Rorug02G0049200
rosa_samantha	Rh2AG097600 Rh2BG098800 Rh2CG100900 Rh2DG098500
rosa_wichuraiana	Rw2G007360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	848, 869, 1099
AatII	GACGTC	1 cut(s)	846
Acc16I	TGCGCA	1 cut(s)	2389
Acc36I	ACCTGC	2 cut(s)	477, 2489
AccB1I	GGYRCC	2 cut(s)	1177, 1535
AccBSI	CCGCTC	3 cut(s)	1158, 1746, 2156
AccI	GTMKAC	2 cut(s)	264, 2292
AccII	CGCG	8 cut(s)	1154, 1168, 1187, 1189, 1247, 1701, 1706, 1742
AccIII	TCCGGA	1 cut(s)	511
AclI	AACGTT	1 cut(s)	2379
AclWI	GGATC	7 cut(s)	71, 678, 910, 1263, 1445, 1832, 2255
AcoI	YGGCCR	8 cut(s)	556, 875, 1084, 1194, 1386, 1419, 1889, 2251
AcsI	RAATTY	1 cut(s)	1930
AcvI	CACGTG	1 cut(s)	1676
AcyI	GRCGYC	3 cut(s)	203, 843, 1178
AfaI	GTAC	6 cut(s)	1319, 1635, 1698, 2068, 2174, 2399
AflIII	ACRYGT	2 cut(s)	1098, 1675
AgeI	ACCGGT	2 cut(s)	631, 1555
AgsI	TTSAA	5 cut(s)	415, 571, 895, 1954, 2053
AjiI	CACGTC	1 cut(s)	1101
AjnI	CCWGG	9 cut(s)	147, 711, 777, 816, 828, 923, 1972, 2281, 2407
AjuI	GAANNNNNNNTTGG	2 cut(s)	530, 562
AleI	CACNNNNGTG	2 cut(s)	1517, 2091
AloI	GAACNNNNNNTCC	4 cut(s)	818, 850, 2485, 2517
Alw21I	GWGCWC	3 cut(s)	528, 590, 2333
Alw26I	GTCTC	7 cut(s)	164, 250, 538, 574, 587, 1381, 2199
AlwI	GGATC	7 cut(s)	71, 678, 910, 1263, 1445, 1832, 2255
AlwNI	CAGNNNCTG	1 cut(s)	823
Ama87I	CYCGRG	2 cut(s)	96, 764
Aor13HI	TCCGGA	1 cut(s)	511
ApaI	GGGCCC	1 cut(s)	2016
ApeKI	GCWGC	3 cut(s)	478, 2102, 2210
ApoI	RAATTY	1 cut(s)	1930
AsiGI	ACCGGT	2 cut(s)	631, 1555
Asp700I	GAANNNNTTC	1 cut(s)	633
AspLEI	GCGC	5 cut(s)	1168, 1180, 1189, 1703, 2390
AsuC2I	CCSGG	5 cut(s)	997, 1117, 1469, 1478, 1611
AsuII	TTCGAA	1 cut(s)	2228
AvaI	CYCGRG	2 cut(s)	96, 764
BaeGI	GKGCMC	2 cut(s)	2016, 2242
BalI	TGGCCA	3 cut(s)	1196, 1421, 2253
BanI	GGYRCC	2 cut(s)	1177, 1535
BanII	GRGCYC	5 cut(s)	590, 798, 997, 2016, 2138
BauI	CACGAG	1 cut(s)	1920
BbrPI	CACGTG	1 cut(s)	1676
Bbv12I	GWGCWC	3 cut(s)	528, 590, 2333
BbvI	GCAGC	3 cut(s)	490, 2114, 2197
BccI	CCATC	7 cut(s)	406, 705, 1168, 1271, 1989, 2130, 2354
BceAI	ACGGC	6 cut(s)	1099, 1179, 1603, 1866, 1876, 2258
BcgI	CGANNNNNNTGC	2 cut(s)	475, 509
BciT130I	CCWGG	9 cut(s)	149, 713, 779, 818, 830, 925, 1974, 2283, 2409
BciVI	GTATCC	1 cut(s)	724
BcnI	CCSGG	5 cut(s)	997, 1117, 1469, 1478, 1611
BcoDI	GTCTC	7 cut(s)	164, 250, 538, 574, 587, 1381, 2199
BfaI	CTAG	2 cut(s)	681, 2037
BfmI	CTRYAG	2 cut(s)	2166, 2496
BfoI	RGCGCY	1 cut(s)	1181
BfuAI	ACCTGC	2 cut(s)	477, 2489
BfuI	GTATCC	1 cut(s)	724
BglI	GCCNNNNNGGC	3 cut(s)	564, 1418, 2020
BglII	AGATCT	1 cut(s)	1947
BmcAI	AGTACT	1 cut(s)	2399
BmeT110I	CYCGRG	2 cut(s)	96, 764
BmgBI	CACGTC	1 cut(s)	1101
BmrI	ACTGGG	1 cut(s)	2028
BmsI	GCATC	2 cut(s)	889, 2197
BmuI	ACTGGG	1 cut(s)	2028
BoxI	GACNNNNGTC	1 cut(s)	666
BpmI	CTGGAG	3 cut(s)	598, 800, 1576
Bpu14I	TTCGAA	1 cut(s)	2228
BpuEI	CTTGAG	3 cut(s)	280, 314, 359
BpuMI	CCSGG	5 cut(s)	997, 1117, 1469, 1478, 1611
Bsa29I	ATCGAT	1 cut(s)	2349
BsaAI	YACGTR	2 cut(s)	1637, 1676
BsaBI	GATNNNNATC	1 cut(s)	1842
BsaHI	GRCGYC	3 cut(s)	203, 843, 1178
BsaI	GGTCTC	1 cut(s)	587
BsaWI	WCCGGW	8 cut(s)	511, 596, 631, 686, 866, 1538, 1555, 1624
Bse118I	RCCGGY	7 cut(s)	558, 631, 1514, 1555, 1780, 1897, 2213
Bse1I	ACTGG	3 cut(s)	45, 111, 2023
Bse3DI	GCAATG	2 cut(s)	2105, 2364
Bse8I	GATNNNNATC	1 cut(s)	1842
BseAI	TCCGGA	1 cut(s)	511
BseBI	CCWGG	9 cut(s)	149, 713, 779, 818, 830, 925, 1974, 2283, 2409
BseCI	ATCGAT	1 cut(s)	2349
BseGI	GGATG	7 cut(s)	248, 278, 1179, 1263, 1725, 2000, 2122
BseJI	GATNNNNATC	1 cut(s)	1842
BseMI	GCAATG	2 cut(s)	2105, 2364
BseMII	CTCAG	3 cut(s)	603, 672, 2448
BseNI	ACTGG	3 cut(s)	45, 111, 2023
BseRI	GAGGAG	3 cut(s)	458, 461, 2187
BseSI	GKGCMC	2 cut(s)	2016, 2242
BseX3I	CGGCCG	2 cut(s)	1386, 1889
BseXI	GCAGC	3 cut(s)	490, 2114, 2197
Bsh1236I	CGCG	8 cut(s)	1154, 1168, 1187, 1189, 1247, 1701, 1706, 1742
Bsh1285I	CGRYCG	2 cut(s)	1389, 1892
BshNI	GGYRCC	2 cut(s)	1177, 1535
BshTI	ACCGGT	2 cut(s)	631, 1555
BshVI	ATCGAT	1 cut(s)	2349
BsiEI	CGRYCG	2 cut(s)	1389, 1892
BsiHKAI	GWGCWC	3 cut(s)	528, 590, 2333
BsiHKCI	CYCGRG	2 cut(s)	96, 764
BslFI	GGGAC	9 cut(s)	948, 1088, 1105, 1174, 1340, 1484, 1594, 1885, 2506
BsmAI	GTCTC	7 cut(s)	164, 250, 538, 574, 587, 1381, 2199
BsmBI	CGTCTC	2 cut(s)	574, 1381
BsmFI	GGGAC	9 cut(s)	948, 1088, 1105, 1174, 1340, 1484, 1594, 1885, 2506
BsmI	GAATGC	1 cut(s)	912
Bso31I	GGTCTC	1 cut(s)	587
BsoBI	CYCGRG	2 cut(s)	96, 764
Bsp119I	TTCGAA	1 cut(s)	2228
Bsp120I	GGGCCC	1 cut(s)	2012
Bsp1286I	GDGCHC	8 cut(s)	528, 590, 798, 997, 2016, 2138, 2242, 2333
Bsp13I	TCCGGA	1 cut(s)	511
Bsp19I	CCATGG	1 cut(s)	1356
BspCNI	CTCAG	3 cut(s)	602, 671, 2447
BspDI	ATCGAT	1 cut(s)	2349
BspEI	TCCGGA	1 cut(s)	511
BspFNI	CGCG	8 cut(s)	1154, 1168, 1187, 1189, 1247, 1701, 1706, 1742
BspHI	TCATGA	3 cut(s)	622, 1440, 2160
BspMAI	CTGCAG	1 cut(s)	2500
BspMI	ACCTGC	2 cut(s)	477, 2489
BspPI	GGATC	7 cut(s)	71, 678, 910, 1263, 1445, 1832, 2255
BspT104I	TTCGAA	1 cut(s)	2228
BspT107I	GGYRCC	2 cut(s)	1177, 1535
BspTNI	GGTCTC	1 cut(s)	587
BsrBI	CCGCTC	3 cut(s)	1158, 1746, 2156
BsrDI	GCAATG	2 cut(s)	2105, 2364
BsrFI	RCCGGY	7 cut(s)	558, 631, 1514, 1555, 1780, 1897, 2213
BsrI	ACTGG	3 cut(s)	45, 111, 2023
BssAI	RCCGGY	7 cut(s)	558, 631, 1514, 1555, 1780, 1897, 2213
BssNAI	GTATAC	1 cut(s)	2293
BssNI	GRCGYC	3 cut(s)	203, 843, 1178
BssSI	CACGAG	1 cut(s)	1920
BssT1I	CCWWGG	7 cut(s)	31, 59, 125, 228, 351, 1356, 1461
Bst1107I	GTATAC	1 cut(s)	2293
Bst2BI	CACGAG	1 cut(s)	1920
Bst2UI	CCWGG	9 cut(s)	149, 713, 779, 818, 830, 925, 1974, 2283, 2409
Bst4CI	ACNGT	7 cut(s)	276, 939, 1447, 1769, 1833, 1876, 2471
Bst6I	CTCTTC	3 cut(s)	385, 419, 2036
BstACI	GRCGYC	3 cut(s)	203, 843, 1178
BstAPI	GCANNNNNTGC	1 cut(s)	1602
BstBAI	YACGTR	2 cut(s)	1637, 1676
BstBI	TTCGAA	1 cut(s)	2228
BstDEI	CTNAG	4 cut(s)	589, 658, 2370, 2434
BstDSI	CCRYGG	6 cut(s)	1087, 1218, 1356, 1433, 1704, 2234
BstEII	GGTNACC	1 cut(s)	668
BstENI	CCTNNNNNAGG	1 cut(s)	827
BstF5I	GGATG	7 cut(s)	248, 278, 1179, 1263, 1725, 2000, 2122
BstFNI	CGCG	8 cut(s)	1154, 1168, 1187, 1189, 1247, 1701, 1706, 1742
BstH2I	RGCGCY	1 cut(s)	1181
BstHHI	GCGC	5 cut(s)	1168, 1180, 1189, 1703, 2390
BstMAI	GTCTC	7 cut(s)	164, 250, 538, 574, 587, 1381, 2199
BstMCI	CGRYCG	2 cut(s)	1389, 1892
BstNI	CCWGG	9 cut(s)	149, 713, 779, 818, 830, 925, 1974, 2283, 2409
BstNSI	RCATGY	1 cut(s)	2388
BstPAI	GACNNNNGTC	1 cut(s)	666
BstPI	GGTNACC	1 cut(s)	668
BstSFI	CTRYAG	2 cut(s)	2166, 2496
BstSLI	GKGCMC	2 cut(s)	2016, 2242
BstUI	CGCG	8 cut(s)	1154, 1168, 1187, 1189, 1247, 1701, 1706, 1742
BstV1I	GCAGC	3 cut(s)	490, 2114, 2197
BstX2I	RGATCY	4 cut(s)	683, 915, 1837, 1947
BstYI	RGATCY	4 cut(s)	683, 915, 1837, 1947
BstZ17I	GTATAC	1 cut(s)	2293
BstZI	CGGCCG	2 cut(s)	1386, 1889
Bsu15I	ATCGAT	1 cut(s)	2349
BsuI	GTATCC	1 cut(s)	724
BsuTUI	ATCGAT	1 cut(s)	2349
BtgI	CCRYGG	6 cut(s)	1087, 1218, 1356, 1433, 1704, 2234
BtgZI	GCGATG	1 cut(s)	2322
BtrI	CACGTC	1 cut(s)	1101
BtsCI	GGATG	7 cut(s)	248, 278, 1179, 1263, 1725, 2000, 2122
BtsI	GCAGTG	1 cut(s)	1425
BtsIMutI	CAGTG	3 cut(s)	944, 1425, 2016
BveI	ACCTGC	2 cut(s)	477, 2489
CaiI	CAGNNNCTG	1 cut(s)	823
CciI	TCATGA	3 cut(s)	622, 1440, 2160
CfoI	GCGC	5 cut(s)	1168, 1180, 1189, 1703, 2390
Cfr10I	RCCGGY	7 cut(s)	558, 631, 1514, 1555, 1780, 1897, 2213
Cfr42I	CCGCGG	1 cut(s)	1707
ClaI	ATCGAT	1 cut(s)	2349
CpoI	CGGWCCG	1 cut(s)	689
CseI	GACGC	1 cut(s)	211
CsiI	ACCWGGT	2 cut(s)	147, 711
Csp6I	GTAC	6 cut(s)	1318, 1634, 1697, 2067, 2173, 2398
CspAI	ACCGGT	2 cut(s)	631, 1555
CspCI	CAANNNNNGTGG	4 cut(s)	1539, 1574, 2005, 2040
CspI	CGGWCCG	1 cut(s)	689
CviQI	GTAC	6 cut(s)	1318, 1634, 1697, 2067, 2173, 2398
DdeI	CTNAG	4 cut(s)	589, 658, 2370, 2434
DinI	GGCGCC	1 cut(s)	1179
DrdI	GACNNNNNNGTC	3 cut(s)	848, 869, 1099
DseDI	GACNNNNNNGTC	3 cut(s)	848, 869, 1099
EaeI	YGGCCR	8 cut(s)	556, 875, 1084, 1194, 1386, 1419, 1889, 2251
EagI	CGGCCG	2 cut(s)	1386, 1889
Eam1104I	CTCTTC	3 cut(s)	385, 419, 2036
EarI	CTCTTC	3 cut(s)	385, 419, 2036
EciI	GGCGGA	3 cut(s)	1047, 1300, 1778
Ecl136II	GAGCTC	1 cut(s)	588
EclXI	CGGCCG	2 cut(s)	1386, 1889
Eco130I	CCWWGG	7 cut(s)	31, 59, 125, 228, 351, 1356, 1461
Eco147I	AGGCCT	2 cut(s)	315, 833
Eco24I	GRGCYC	5 cut(s)	590, 798, 997, 2016, 2138
Eco31I	GGTCTC	1 cut(s)	587
Eco32I	GATATC	1 cut(s)	1240
Eco52I	CGGCCG	2 cut(s)	1386, 1889
Eco53kI	GAGCTC	1 cut(s)	588
Eco72I	CACGTG	1 cut(s)	1676
Eco88I	CYCGRG	2 cut(s)	96, 764
Eco91I	GGTNACC	1 cut(s)	668
EcoICRI	GAGCTC	1 cut(s)	588
EcoNI	CCTNNNNNAGG	1 cut(s)	827
EcoO109I	RGGNCCY	3 cut(s)	820, 1092, 1410
EcoO65I	GGTNACC	1 cut(s)	668
EcoRII	CCWGG	9 cut(s)	147, 711, 777, 816, 828, 923, 1972, 2281, 2407
EcoRV	GATATC	1 cut(s)	1240
EcoT14I	CCWWGG	7 cut(s)	31, 59, 125, 228, 351, 1356, 1461
EcoT38I	GRGCYC	5 cut(s)	590, 798, 997, 2016, 2138
EgeI	GGCGCC	1 cut(s)	1179
EheI	GGCGCC	1 cut(s)	1179
ErhI	CCWWGG	7 cut(s)	31, 59, 125, 228, 351, 1356, 1461
Esp3I	CGTCTC	2 cut(s)	574, 1381
FaqI	GGGAC	9 cut(s)	948, 1088, 1105, 1174, 1340, 1484, 1594, 1885, 2506
FauI	CCCGC	7 cut(s)	895, 1151, 1182, 1240, 1298, 1391, 1699
FblI	GTMKAC	2 cut(s)	264, 2292
FokI	GGATG	7 cut(s)	235, 265, 1186, 1250, 1732, 2007, 2109
FriOI	GRGCYC	5 cut(s)	590, 798, 997, 2016, 2138
FspBI	CTAG	2 cut(s)	681, 2037
FspI	TGCGCA	1 cut(s)	2389
GlaI	GCGC	5 cut(s)	1167, 1179, 1188, 1702, 2389
GsuI	CTGGAG	3 cut(s)	598, 800, 1576
HaeII	RGCGCY	1 cut(s)	1181
HgaI	GACGC	1 cut(s)	211
HhaI	GCGC	5 cut(s)	1168, 1180, 1189, 1703, 2390
Hin1I	GRCGYC	3 cut(s)	203, 843, 1178
Hin6I	GCGC	5 cut(s)	1166, 1178, 1187, 1701, 2388
HinP1I	GCGC	5 cut(s)	1166, 1178, 1187, 1701, 2388
HincII	GTYRAC	2 cut(s)	1669, 1981
HindII	GTYRAC	2 cut(s)	1669, 1981
HpaI	GTTAAC	2 cut(s)	1669, 1981
Hpy166II	GTNNAC	7 cut(s)	265, 1512, 1570, 1669, 1981, 2175, 2293
Hpy8I	GTNNAC	7 cut(s)	265, 1512, 1570, 1669, 1981, 2175, 2293
Hpy99I	CGWCG	5 cut(s)	212, 854, 1274, 1852, 1897
HpyCH4III	ACNGT	7 cut(s)	276, 939, 1447, 1769, 1833, 1876, 2471
HpyCH4IV	ACGT	7 cut(s)	210, 615, 843, 1100, 1636, 1675, 2379
HpyCH4V	TGCA	8 cut(s)	478, 486, 975, 1829, 2102, 2144, 2321, 2498
HpyF3I	CTNAG	4 cut(s)	589, 658, 2370, 2434
HpySE526I	ACGT	7 cut(s)	210, 615, 843, 1100, 1636, 1675, 2379
Hsp92I	GRCGYC	3 cut(s)	203, 843, 1178
HspAI	GCGC	5 cut(s)	1166, 1178, 1187, 1701, 2388
KasI	GGCGCC	1 cut(s)	1177
KflI	GGGWCCC	1 cut(s)	1092
Kpn2I	TCCGGA	1 cut(s)	511
KspAI	GTTAAC	2 cut(s)	1669, 1981
KspI	CCGCGG	1 cut(s)	1707
Lsp1109I	GCAGC	3 cut(s)	490, 2114, 2197
LweI	GCATC	2 cut(s)	889, 2197
MabI	ACCWGGT	2 cut(s)	147, 711
MaeI	CTAG	2 cut(s)	681, 2037
MaeII	ACGT	7 cut(s)	210, 615, 843, 1100, 1636, 1675, 2379
MaeIII	GTNAC	9 cut(s)	668, 1148, 1521, 1769, 1776, 1808, 1936, 2275, 2380
MbiI	CCGCTC	3 cut(s)	1158, 1746, 2156
MboII	GAAGA	8 cut(s)	346, 402, 433, 436, 463, 466, 1057, 2053
MfeI	CAATTG	1 cut(s)	2128
MflI	RGATCY	4 cut(s)	683, 915, 1837, 1947
MhlI	GDGCHC	8 cut(s)	528, 590, 798, 997, 2016, 2138, 2242, 2333
MlsI	TGGCCA	3 cut(s)	1196, 1421, 2253
MluCI	AATT	4 cut(s)	1650, 1930, 2128, 2477
MluNI	TGGCCA	3 cut(s)	1196, 1421, 2253
Mly113I	GGCGCC	1 cut(s)	1178
MlyI	GAGTC	9 cut(s)	509, 650, 879, 890, 953, 1073, 1637, 2027, 2053
MmeI	TCCRAC	5 cut(s)	561, 832, 1429, 1645, 1871
Mox20I	TGGCCA	3 cut(s)	1196, 1421, 2253
MroI	TCCGGA	1 cut(s)	511
MroXI	GAANNNNTTC	1 cut(s)	633
MscI	TGGCCA	3 cut(s)	1196, 1421, 2253
MseI	TTAA	3 cut(s)	213, 1668, 1980
MslI	CAYNNNNRTG	5 cut(s)	1355, 1517, 1541, 2091, 2326
Msp20I	TGGCCA	3 cut(s)	1196, 1421, 2253
MspA1I	CMGCKG	2 cut(s)	1533, 1706
MunI	CAATTG	1 cut(s)	2128
Mva1269I	GAATGC	1 cut(s)	912
MvaI	CCWGG	9 cut(s)	149, 713, 779, 818, 830, 925, 1974, 2283, 2409
MvnI	CGCG	8 cut(s)	1154, 1168, 1187, 1189, 1247, 1701, 1706, 1742
NarI	GGCGCC	1 cut(s)	1178
NciI	CCSGG	5 cut(s)	997, 1117, 1469, 1478, 1611
NcoI	CCATGG	1 cut(s)	1356
NmeAIII	GCCGAG	4 cut(s)	466, 1087, 1095, 1364
NmuCI	GTSAC	5 cut(s)	668, 1521, 1769, 1808, 2275
NsbI	TGCGCA	1 cut(s)	2389
NspI	RCATGY	1 cut(s)	2388
NspV	TTCGAA	1 cut(s)	2228
OliI	CACNNNNGTG	2 cut(s)	1517, 2091
PaeR7I	CTCGAG	1 cut(s)	96
PagI	TCATGA	3 cut(s)	622, 1440, 2160
PceI	AGGCCT	2 cut(s)	315, 833
PcsI	WCGNNNNNNNCGW	2 cut(s)	723, 1127
PctI	GAATGC	1 cut(s)	912
PdmI	GAANNNNTTC	1 cut(s)	633
PfeI	GAWTC	2 cut(s)	1843, 2230
PfoI	TCCNGGA	2 cut(s)	816, 2407
PinAI	ACCGGT	2 cut(s)	631, 1555
PleI	GAGTC	9 cut(s)	509, 650, 878, 889, 952, 1072, 1636, 2027, 2052
PluTI	GGCGCC	1 cut(s)	1181
PmaCI	CACGTG	1 cut(s)	1676
PmlI	CACGTG	1 cut(s)	1676
PpsI	GAGTC	9 cut(s)	509, 650, 878, 889, 952, 1072, 1636, 2027, 2052
Ppu21I	YACGTR	2 cut(s)	1637, 1676
PpuMI	RGGWCCY	2 cut(s)	820, 1092
PshAI	GACNNNNGTC	1 cut(s)	666
Psp124BI	GAGCTC	1 cut(s)	590
Psp1406I	AACGTT	1 cut(s)	2379
Psp5II	RGGWCCY	2 cut(s)	820, 1092
Psp6I	CCWGG	9 cut(s)	147, 711, 777, 816, 828, 923, 1972, 2281, 2407
PspCI	CACGTG	1 cut(s)	1676
PspEI	GGTNACC	1 cut(s)	668
PspGI	CCWGG	9 cut(s)	147, 711, 777, 816, 828, 923, 1972, 2281, 2407
PspOMI	GGGCCC	1 cut(s)	2012
PspPPI	RGGWCCY	2 cut(s)	820, 1092
PspXI	VCTCGAGB	1 cut(s)	96
PstI	CTGCAG	1 cut(s)	2500
PstNI	CAGNNNCTG	1 cut(s)	823
PsuI	RGATCY	4 cut(s)	683, 915, 1837, 1947
RsaI	GTAC	6 cut(s)	1319, 1635, 1698, 2068, 2174, 2399
RsaNI	GTAC	6 cut(s)	1318, 1634, 1697, 2067, 2173, 2398
RseI	CAYNNNNRTG	5 cut(s)	1355, 1517, 1541, 2091, 2326
Rsr2I	CGGWCCG	1 cut(s)	689
RsrII	CGGWCCG	1 cut(s)	689
SacI	GAGCTC	1 cut(s)	590
SacII	CCGCGG	1 cut(s)	1707
SaqAI	TTAA	3 cut(s)	213, 1668, 1980
ScaI	AGTACT	1 cut(s)	2399
SchI	GAGTC	9 cut(s)	509, 650, 879, 890, 953, 1073, 1637, 2027, 2053
SduI	GDGCHC	8 cut(s)	528, 590, 798, 997, 2016, 2138, 2242, 2333
SexAI	ACCWGGT	2 cut(s)	147, 711
SfaNI	GCATC	2 cut(s)	889, 2197
SfcI	CTRYAG	2 cut(s)	2166, 2496
SfiI	GGCCNNNNNGGCC	1 cut(s)	1418
SfoI	GGCGCC	1 cut(s)	1179
Sfr274I	CTCGAG	1 cut(s)	96
Sfr303I	CCGCGG	1 cut(s)	1707
SfuI	TTCGAA	1 cut(s)	2228
SgrAI	CRCCGGYG	1 cut(s)	1514
SgrBI	CCGCGG	1 cut(s)	1707
SlaI	CTCGAG	1 cut(s)	96
SmiMI	CAYNNNNRTG	5 cut(s)	1355, 1517, 1541, 2091, 2326
SmlI	CTYRAG	4 cut(s)	96, 295, 329, 374
SmoI	CTYRAG	4 cut(s)	96, 295, 329, 374
Sse9I	AATT	4 cut(s)	1650, 1930, 2128, 2477
SseBI	AGGCCT	2 cut(s)	315, 833
SspDI	GGCGCC	1 cut(s)	1177
SspMI	CTAG	2 cut(s)	681, 2037
SstI	GAGCTC	1 cut(s)	590
StuI	AGGCCT	2 cut(s)	315, 833
StyI	CCWWGG	7 cut(s)	31, 59, 125, 228, 351, 1356, 1461
TaaI	ACNGT	7 cut(s)	276, 939, 1447, 1769, 1833, 1876, 2471
TaiI	ACGT	7 cut(s)	213, 618, 846, 1103, 1639, 1678, 2382
TasI	AATT	4 cut(s)	1650, 1930, 2128, 2477
TatI	WGTACW	1 cut(s)	2397
TauI	GCSGC	7 cut(s)	1115, 1536, 1706, 1742, 1891, 1910, 2120
TfiI	GAWTC	2 cut(s)	1843, 2230
Tru1I	TTAA	3 cut(s)	213, 1668, 1980
Tru9I	TTAA	3 cut(s)	213, 1668, 1980
TscAI	CASTG	3 cut(s)	944, 1432, 2023
TseFI	GTSAC	5 cut(s)	668, 1521, 1769, 1808, 2275
TseI	GCWGC	3 cut(s)	478, 2102, 2210
Tsp45I	GTSAC	5 cut(s)	668, 1521, 1769, 1808, 2275
TspDTI	ATGAA	3 cut(s)	642, 1058, 2418
TspGWI	ACGGA	4 cut(s)	598, 1287, 2192, 2223
TspRI	CASTG	3 cut(s)	944, 1432, 2023
XagI	CCTNNNNNAGG	1 cut(s)	827
XapI	RAATTY	1 cut(s)	1930
XbaI	TCTAGA	1 cut(s)	680
XceI	RCATGY	1 cut(s)	2388
XhoI	CTCGAG	1 cut(s)	96
XmiI	GTMKAC	2 cut(s)	264, 2292
XmnI	GAANNNNTTC	1 cut(s)	633
XspI	CTAG	2 cut(s)	681, 2037
ZraI	GACGTC	1 cut(s)	844
ZrmI	AGTACT	1 cut(s)	2399

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.