Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0013828

Physical Location & Seq

Genomic Coordinates Forward (+)

8306137 .. 8309439

Gene Structure 3303 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG097600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2298 bp

ATGGCCTCCTCCGAGGCCCAGTTCTGGTTCGTAGCTTTAACACTTGTTCTGACATGTCTATCCGTAACCGCCAAACAGACGTACATAGTTCAGATGAAGCACCATTCCAAACCCTCCTCATTCGCCACCCACAGTGACTGGTACTCCGCCAACCTCCAAGCTCTCTCCTCTGACTCTGACTCTGACTCTGACCCCCTCCTCTACACCTACGACGCCGCCTACCACGGCTTCGCCGCTTCTCTAGATCCCGAACAGGCCGACACTCTGCGGCAGTCGGAATCTGTAATCGGGGTATTCGAGGATACTTTATACAACCTCCACACCACACGAACACCCGAGTTTCTGGGCCTGGAAACCGCTAACGGGCTCTGGGCCGGACACTCGCTCCAGGACCTGAACCAGGCCTCCAATGACGTCATCGTCGGAGTGCTGGACACCGGAGTCTGGCCTGAGTCCAAGAGCTTCAACGATGCGGGAATGCCAGAGATCCCGTCCAGGTGGCGGGGACAGTGCGAGTCGGGAACCGATTTCAGCCCCTCTCTCTGCAACAAGAAGCTGATCGGAGCCCGGAGCTTTTCTAAAGGCTACCGCATGGCCTCCGGCGGAAGCTACATGAAGAAACCGAAGGAGGCCGAGTCGCCGAGGGACCAAGACGGCCACGGGACCCACACGTCCAGCACCGCCGCCGGGTCGCTGGTGGCGAACGCCAGCCTGCTCGGTTACGCGAGCGGGACGGCCCGTGGGATGGCGCCTCACGCGCGGGTGGCCACCTACAAGGTCTGCTGGACCACGGGTTGCTTCGGGTCCGATATCCTCGCGGGTATGGATCGGGCCATCCTCGACGGAGTTGATGTGCTGTCGCTCTCTTTGGGCGGCGGGTCCGCCCCGTACTTTAGGGACACAATCGCAATAGGAGCTTTCACCGCCATGGAGAGGGGCATTTTCGTCTCTTGCTCGGCCGGAAATAGCGGGCCAAGTAGGGCCTCATTGGCCAACACTGCCCCGTGGATCATGACGGTTGGAGCCGGAACCTTGGACCGGGACTTCCCGGCTTTCGCTTTGCTAGGAAACCAAAACCGGTTCACCGGCGTGTCACTTTACAGCGGCACCGGAATGGGGTCAAAACCGGTGGAGTTGGTTTACAACAAGGGGACTAACGGCTCCAGCAATCTGTGCTTGCCCGGTTCGCTCCAACCGGAGTCGGTACGTGGGAAAGTGGTAATTTGCGACAGGGGAGTTAACGCACGTGTGGAGAAAGGTGGAGTTGTACGCGCCGCGGGTGGGGTTGGGATGATACTCGCCAACACCGCCGCGAGTGGAGAGGAAATGGTGGCGGACAGTCACTTGTTACCGGCTGTTGCGGTTGGGAGGAAAGTGGGTGACTTGATAAGGCAGTATGCACAGTCAGATCCGAATCCGACGGCGGTGATTAGCTTTGGTGGGACGGTGCTGAATGTGCGGCCGTCGCCGGTTGTGGCGGCGTTTAGCTCTCGTGGGCCAAATTTGGTTACTCCCCAGATCTTGAAGCCCGATGTGATTGGTCCAGGGGTTAACATCTTGGCTGGATGGTCAGAGGCTATTGGGCCCACTGGGCTTGCGGAGGACTCTAGGAAGAGTCAGTTCAACATCATGTCAGGTACATCTATGTCATGCCCACACATAAGTGGGCTTGCAGCATTGCTCAAAGCGGCCCATCCCAATTGGAGCCCAAGTGCAATCAAATCCGCTCTCATGACTACAGCGTACACACATGACAACACCATGTCTCCTCTCCGTGATGCTGCCGGTGGCACATTTTCGAATCCGTGGGCACATGGTTCTGGCCATGTCGATCCCTCGAAAGCCGTCACGCCGGGTCTTGTATATGACATTTCGAGCGATGACTATGTTGCATTTTTGTGCTCGCTGGACTACACCATCGATCATGTCCAAGCCATTGCTAAGAGAAACGTTACATGCGCAAGAAAGTACTCTAATCCTGGACAACTCAACTACCCTTCATTCTCAGTTGTGTTTGGGAACAAGAGGGTTGTGAGATACAGTCGAGAATTGACAAATGTAGGGACTGCAGGTTCTTTATACAAGGTCATTGTGAGCGGACCACCCGGAGTGAAGACTATTGTTAAACCCTCAAGGCTTTTCTTTGCAACTGTAGGGGAGAAGAAGAAGTACACAGTCACCTTTGTGTCTGCCAAGGGCGGCATTAGAACATCAAGGTCAGAATTTGGTTCGATCATGTGGGCAAACCCCCTACACCTCGTTAAGAGCCCAGTTGCTTTTGCATGGACGCTGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005911 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009506 GO:0012505 GO:0016787 GO:0017171 GO:0019538 GO:0030054 GO:0030312 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

765

Amino Acids

80.87

Weight (kDa)

8.58

Isoelectric Point (pI)

35.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	27 - 107	5.7e-19	Peptidase inhibitor I9
Peptidase_S8	PF00082	137 - 585	6.3e-46	Subtilase family
PA	PF02225	378 - 462	2.4e-12	PA domain
fn3_6	PF17766	662 - 759	6.6e-23	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05920
fragaria_vesca	FvH4_1g08840
malus_domestica	MD02G1093500.v1.1 MD15G1218800.v1.1
prunus_persica	Prupe.7G197100_v2.0.a1
pyrus_communis	pycom02g07370 pycom15g19400
rosa_chinensis	RchiOBHm_Chr2g0095311
rosa_laevigata	RLG00000016553
rosa_multiflora	Rmu_ssc0000183.1_g000049
rosa_roxburghii	Rroxscaffold_2G00146490
rosa_rugosa	Rorug02G0049200
rosa_samantha	Rh2AG097600 Rh2BG098800 Rh2CG100900 Rh2DG098500
rosa_wichuraiana	Rw2G007360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	419, 440, 670
AatII	GACGTC	1 cut(s)	417
Acc16I	TGCGCA	1 cut(s)	1960
Acc36I	ACCTGC	1 cut(s)	2060
AccB1I	GGYRCC	2 cut(s)	748, 1106
AccBSI	CCGCTC	3 cut(s)	729, 1727, 2097
AccII	CGCG	7 cut(s)	725, 758, 760, 818, 1272, 1277, 1313
AclI	AACGTT	1 cut(s)	1950
AclWI	GGATC	6 cut(s)	239, 481, 834, 1016, 1403, 1826
AcoI	YGGCCR	6 cut(s)	655, 765, 957, 990, 1460, 1822
AcsI	RAATTY	2 cut(s)	1501, 2222
AcvI	CACGTG	1 cut(s)	1247
AcyI	GRCGYC	3 cut(s)	213, 414, 749
AfaI	GTAC	9 cut(s)	83, 143, 890, 1206, 1269, 1639, 1745, 1970, 2171
AflIII	ACRYGT	3 cut(s)	53, 669, 1246
AgeI	ACCGGT	2 cut(s)	1077, 1126
AgsI	TTSAA	3 cut(s)	466, 1525, 1624
AjiI	CACGTC	1 cut(s)	672
AjnI	CCWGG	6 cut(s)	348, 387, 399, 494, 1543, 1978
AleI	CACNNNNGTG	3 cut(s)	1088, 1662, 2183
AloI	GAACNNNNNNTCC	4 cut(s)	389, 421, 2056, 2088
AluBI	AGCT	9 cut(s)	35, 161, 462, 556, 573, 609, 917, 1434, 1488
AluI	AGCT	9 cut(s)	35, 161, 462, 556, 573, 609, 917, 1434, 1488
Alw21I	GWGCWC	1 cut(s)	1904
Alw26I	GTCTC	2 cut(s)	952, 1770
AlwI	GGATC	6 cut(s)	239, 481, 834, 1016, 1403, 1826
AlwNI	CAGNNNCTG	2 cut(s)	138, 394
Ama87I	CYCGRG	1 cut(s)	335
ApaI	GGGCCC	1 cut(s)	1587
ApeKI	GCWGC	2 cut(s)	1673, 1781
ApoI	RAATTY	2 cut(s)	1501, 2222
AsiGI	ACCGGT	2 cut(s)	1077, 1126
AspLEI	GCGC	4 cut(s)	751, 760, 1274, 1961
AsuC2I	CCSGG	7 cut(s)	568, 688, 1040, 1049, 1182, 1854, 2106
AsuHPI	GGTGA	5 cut(s)	913, 1075, 1391, 1438, 2170
AsuII	TTCGAA	1 cut(s)	1799
AvaI	CYCGRG	1 cut(s)	335
AvaII	GGWCC	9 cut(s)	391, 646, 663, 786, 804, 879, 1036, 1541, 2099
BaeGI	GKGCMC	2 cut(s)	1587, 1813
BalI	TGGCCA	3 cut(s)	767, 992, 1824
BanI	GGYRCC	2 cut(s)	748, 1106
BanII	GRGCYC	5 cut(s)	369, 568, 1587, 1709, 2270
BarI	GAAGNNNNNNTAC	2 cut(s)	2153, 2185
BauI	CACGAG	1 cut(s)	1491
BbrPI	CACGTG	1 cut(s)	1247
BbsI	GAAGAC	1 cut(s)	2120
Bbv12I	GWGCWC	1 cut(s)	1904
BbvI	GCAGC	2 cut(s)	1685, 1768
BccI	CCATC	5 cut(s)	739, 842, 1560, 1701, 1925
BceAI	ACGGC	7 cut(s)	241, 670, 750, 1174, 1437, 1447, 1829
BciT130I	CCWGG	6 cut(s)	350, 389, 401, 496, 1545, 1980
BciVI	GTATCC	1 cut(s)	295
BcnI	CCSGG	7 cut(s)	568, 688, 1040, 1049, 1182, 1854, 2106
BcoDI	GTCTC	2 cut(s)	952, 1770
BfaI	CTAG	3 cut(s)	242, 1064, 1608
BfmI	CTRYAG	3 cut(s)	1737, 2067, 2151
BfoI	RGCGCY	1 cut(s)	752
BfuAI	ACCTGC	1 cut(s)	2060
BfuI	GTATCC	1 cut(s)	295
BglI	GCCNNNNNGGC	2 cut(s)	989, 1591
BglII	AGATCT	1 cut(s)	1518
BmcAI	AGTACT	1 cut(s)	1970
Bme18I	GGWCC	9 cut(s)	391, 646, 663, 786, 804, 879, 1036, 1541, 2099
BmeT110I	CYCGRG	1 cut(s)	335
BmgBI	CACGTC	1 cut(s)	672
BmrI	ACTGGG	3 cut(s)	13, 1599, 2264
BmsI	GCATC	2 cut(s)	460, 1768
BmuI	ACTGGG	3 cut(s)	13, 1599, 2264
BpiI	GAAGAC	1 cut(s)	2120
BpmI	CTGGAG	2 cut(s)	371, 1147
Bpu14I	TTCGAA	1 cut(s)	1799
BpuEI	CTTGAG	1 cut(s)	2116
BpuMI	CCSGG	7 cut(s)	568, 688, 1040, 1049, 1182, 1854, 2106
Bsa29I	ATCGAT	1 cut(s)	1920
BsaAI	YACGTR	2 cut(s)	1208, 1247
BsaBI	GATNNNNATC	1 cut(s)	1413
BsaHI	GRCGYC	3 cut(s)	213, 414, 749
BsaWI	WCCGGW	5 cut(s)	437, 1077, 1109, 1126, 1195
Bse118I	RCCGGY	6 cut(s)	1077, 1085, 1126, 1351, 1468, 1784
Bse1I	ACTGG	4 cut(s)	19, 143, 1594, 2270
Bse3DI	GCAATG	2 cut(s)	1676, 1935
Bse8I	GATNNNNATC	1 cut(s)	1413
BseBI	CCWGG	6 cut(s)	350, 389, 401, 496, 1545, 1980
BseCI	ATCGAT	1 cut(s)	1920
BseGI	GGATG	5 cut(s)	750, 834, 1296, 1571, 1693
BseJI	GATNNNNATC	1 cut(s)	1413
BseMI	GCAATG	2 cut(s)	1676, 1935
BseMII	CTCAG	2 cut(s)	441, 2019
BseNI	ACTGG	4 cut(s)	19, 143, 1594, 2270
BseRI	GAGGAG	4 cut(s)	106, 157, 188, 1758
BseSI	GKGCMC	2 cut(s)	1587, 1813
BseX3I	CGGCCG	2 cut(s)	957, 1460
BseXI	GCAGC	2 cut(s)	1685, 1768
Bsh1236I	CGCG	7 cut(s)	725, 758, 760, 818, 1272, 1277, 1313
Bsh1285I	CGRYCG	2 cut(s)	960, 1463
BshNI	GGYRCC	2 cut(s)	748, 1106
BshTI	ACCGGT	2 cut(s)	1077, 1126
BshVI	ATCGAT	1 cut(s)	1920
BsiEI	CGRYCG	2 cut(s)	960, 1463
BsiHKAI	GWGCWC	1 cut(s)	1904
BsiHKCI	CYCGRG	1 cut(s)	335
BslFI	GGGAC	9 cut(s)	519, 659, 676, 745, 911, 1055, 1165, 1456, 2077
BsmAI	GTCTC	2 cut(s)	952, 1770
BsmBI	CGTCTC	1 cut(s)	952
BsmFI	GGGAC	9 cut(s)	519, 659, 676, 745, 911, 1055, 1165, 1456, 2077
BsmI	GAATGC	1 cut(s)	483
BsoBI	CYCGRG	1 cut(s)	335
Bsp119I	TTCGAA	1 cut(s)	1799
Bsp120I	GGGCCC	1 cut(s)	1583
Bsp1286I	GDGCHC	7 cut(s)	369, 568, 1587, 1709, 1813, 1904, 2270
Bsp19I	CCATGG	1 cut(s)	927
BspCNI	CTCAG	2 cut(s)	442, 2018
BspDI	ATCGAT	1 cut(s)	1920
BspFNI	CGCG	7 cut(s)	725, 758, 760, 818, 1272, 1277, 1313
BspHI	TCATGA	2 cut(s)	1011, 1731
BspMAI	CTGCAG	1 cut(s)	2071
BspMI	ACCTGC	1 cut(s)	2060
BspPI	GGATC	6 cut(s)	239, 481, 834, 1016, 1403, 1826
BspT104I	TTCGAA	1 cut(s)	1799
BspT107I	GGYRCC	2 cut(s)	748, 1106
BsrBI	CCGCTC	3 cut(s)	729, 1727, 2097
BsrDI	GCAATG	2 cut(s)	1676, 1935
BsrFI	RCCGGY	6 cut(s)	1077, 1085, 1126, 1351, 1468, 1784
BsrI	ACTGG	4 cut(s)	19, 143, 1594, 2270
BssAI	RCCGGY	6 cut(s)	1077, 1085, 1126, 1351, 1468, 1784
BssNI	GRCGYC	3 cut(s)	213, 414, 749
BssSI	CACGAG	1 cut(s)	1491
BssT1I	CCWWGG	3 cut(s)	927, 1032, 2193
Bst2BI	CACGAG	1 cut(s)	1491
Bst2UI	CCWGG	6 cut(s)	350, 389, 401, 496, 1545, 1980
Bst4CI	ACNGT	9 cut(s)	134, 510, 1018, 1340, 1404, 1447, 2042, 2152, 2176
Bst6I	CTCTTC	1 cut(s)	1607
BstACI	GRCGYC	3 cut(s)	213, 414, 749
BstAPI	GCANNNNNTGC	1 cut(s)	1173
BstBAI	YACGTR	2 cut(s)	1208, 1247
BstBI	TTCGAA	1 cut(s)	1799
BstC8I	GCNNGC	8 cut(s)	709, 713, 727, 971, 1178, 1596, 1671, 1904
BstDEI	CTNAG	3 cut(s)	450, 1941, 2005
BstDSI	CCRYGG	8 cut(s)	223, 658, 739, 789, 927, 1004, 1275, 1805
BstENI	CCTNNNNNAGG	1 cut(s)	398
BstF5I	GGATG	5 cut(s)	750, 834, 1296, 1571, 1693
BstFNI	CGCG	7 cut(s)	725, 758, 760, 818, 1272, 1277, 1313
BstH2I	RGCGCY	1 cut(s)	752
BstHHI	GCGC	4 cut(s)	751, 760, 1274, 1961
BstMAI	GTCTC	2 cut(s)	952, 1770
BstMCI	CGRYCG	2 cut(s)	960, 1463
BstNI	CCWGG	6 cut(s)	350, 389, 401, 496, 1545, 1980
BstNSI	RCATGY	2 cut(s)	57, 1959
BstSFI	CTRYAG	3 cut(s)	1737, 2067, 2151
BstSLI	GKGCMC	2 cut(s)	1587, 1813
BstUI	CGCG	7 cut(s)	725, 758, 760, 818, 1272, 1277, 1313
BstV1I	GCAGC	2 cut(s)	1685, 1768
BstV2I	GAAGAC	1 cut(s)	2120
BstX2I	RGATCY	4 cut(s)	244, 486, 1408, 1518
BstYI	RGATCY	4 cut(s)	244, 486, 1408, 1518
BstZI	CGGCCG	2 cut(s)	957, 1460
Bsu15I	ATCGAT	1 cut(s)	1920
BsuI	GTATCC	1 cut(s)	295
BsuTUI	ATCGAT	1 cut(s)	1920
BtgI	CCRYGG	8 cut(s)	223, 658, 739, 789, 927, 1004, 1275, 1805
BtgZI	GCGATG	1 cut(s)	1893
BtrI	CACGTC	1 cut(s)	672
BtsCI	GGATG	5 cut(s)	750, 834, 1296, 1571, 1693
BtsI	GCAGTG	1 cut(s)	996
BtsIMutI	CAGTG	4 cut(s)	139, 515, 996, 1587
BveI	ACCTGC	1 cut(s)	2060
Cac8I	GCNNGC	8 cut(s)	709, 713, 727, 971, 1178, 1596, 1671, 1904
CaiI	CAGNNNCTG	2 cut(s)	138, 394
CciI	TCATGA	2 cut(s)	1011, 1731
CfoI	GCGC	4 cut(s)	751, 760, 1274, 1961
Cfr10I	RCCGGY	6 cut(s)	1077, 1085, 1126, 1351, 1468, 1784
Cfr42I	CCGCGG	1 cut(s)	1278
ClaI	ATCGAT	1 cut(s)	1920
CseI	GACGC	1 cut(s)	221
Csp6I	GTAC	9 cut(s)	82, 142, 889, 1205, 1268, 1638, 1744, 1969, 2170
CspAI	ACCGGT	2 cut(s)	1077, 1126
CspCI	CAANNNNNGTGG	4 cut(s)	1110, 1145, 1576, 1611
CviQI	GTAC	9 cut(s)	82, 142, 889, 1205, 1268, 1638, 1744, 1969, 2170
DdeI	CTNAG	3 cut(s)	450, 1941, 2005
DinI	GGCGCC	1 cut(s)	750
DrdI	GACNNNNNNGTC	3 cut(s)	419, 440, 670
DseDI	GACNNNNNNGTC	3 cut(s)	419, 440, 670
EaeI	YGGCCR	6 cut(s)	655, 765, 957, 990, 1460, 1822
EagI	CGGCCG	2 cut(s)	957, 1460
Eam1104I	CTCTTC	1 cut(s)	1607
EarI	CTCTTC	1 cut(s)	1607
EciI	GGCGGA	4 cut(s)	136, 618, 871, 1349
EclXI	CGGCCG	2 cut(s)	957, 1460
Eco130I	CCWWGG	3 cut(s)	927, 1032, 2193
Eco147I	AGGCCT	1 cut(s)	404
Eco24I	GRGCYC	5 cut(s)	369, 568, 1587, 1709, 2270
Eco32I	GATATC	1 cut(s)	811
Eco47I	GGWCC	9 cut(s)	391, 646, 663, 786, 804, 879, 1036, 1541, 2099
Eco52I	CGGCCG	2 cut(s)	957, 1460
Eco72I	CACGTG	1 cut(s)	1247
Eco88I	CYCGRG	1 cut(s)	335
EcoNI	CCTNNNNNAGG	1 cut(s)	398
EcoO109I	RGGNCCY	3 cut(s)	391, 663, 981
EcoRII	CCWGG	6 cut(s)	348, 387, 399, 494, 1543, 1978
EcoRV	GATATC	1 cut(s)	811
EcoT14I	CCWWGG	3 cut(s)	927, 1032, 2193
EcoT38I	GRGCYC	5 cut(s)	369, 568, 1587, 1709, 2270
EgeI	GGCGCC	1 cut(s)	750
EheI	GGCGCC	1 cut(s)	750
ErhI	CCWWGG	3 cut(s)	927, 1032, 2193
Esp3I	CGTCTC	1 cut(s)	952
FaqI	GGGAC	9 cut(s)	519, 659, 676, 745, 911, 1055, 1165, 1456, 2077
FauI	CCCGC	8 cut(s)	466, 495, 722, 753, 811, 869, 962, 1270
FokI	GGATG	5 cut(s)	757, 821, 1303, 1578, 1680
FriOI	GRGCYC	5 cut(s)	369, 568, 1587, 1709, 2270
FspBI	CTAG	3 cut(s)	242, 1064, 1608
FspI	TGCGCA	1 cut(s)	1960
GlaI	GCGC	4 cut(s)	750, 759, 1273, 1960
GsuI	CTGGAG	2 cut(s)	371, 1147
HaeII	RGCGCY	1 cut(s)	752
HgaI	GACGC	1 cut(s)	221
HhaI	GCGC	4 cut(s)	751, 760, 1274, 1961
Hin1I	GRCGYC	3 cut(s)	213, 414, 749
Hin6I	GCGC	4 cut(s)	749, 758, 1272, 1959
HinP1I	GCGC	4 cut(s)	749, 758, 1272, 1959
HincII	GTYRAC	2 cut(s)	1240, 1552
HindII	GTYRAC	2 cut(s)	1240, 1552
HpaI	GTTAAC	2 cut(s)	1240, 1552
HphI	GGTGA	5 cut(s)	913, 1075, 1391, 1438, 2170
Hpy166II	GTNNAC	6 cut(s)	1083, 1141, 1240, 1552, 1746, 2172
Hpy188III	TCNNGA	7 cut(s)	242, 248, 519, 1012, 1522, 1732, 2045
Hpy8I	GTNNAC	6 cut(s)	1083, 1141, 1240, 1552, 1746, 2172
Hpy99I	CGWCG	5 cut(s)	215, 425, 845, 1423, 1468
HpyAV	CCTTC	2 cut(s)	619, 2007
HpyCH4III	ACNGT	9 cut(s)	134, 510, 1018, 1340, 1404, 1447, 2042, 2152, 2176
HpyCH4IV	ACGT	6 cut(s)	80, 414, 671, 1207, 1246, 1950
HpyCH4V	TGCA	8 cut(s)	546, 1400, 1673, 1715, 1892, 2069, 2147, 2282
HpyF3I	CTNAG	3 cut(s)	450, 1941, 2005
HpySE526I	ACGT	6 cut(s)	80, 414, 671, 1207, 1246, 1950
Hsp92I	GRCGYC	3 cut(s)	213, 414, 749
HspAI	GCGC	4 cut(s)	749, 758, 1272, 1959
KasI	GGCGCC	1 cut(s)	748
KflI	GGGWCCC	1 cut(s)	663
KspAI	GTTAAC	2 cut(s)	1240, 1552
KspI	CCGCGG	1 cut(s)	1278
LmnI	GCTCC	8 cut(s)	390, 563, 570, 914, 1022, 1166, 1194, 1704
Lsp1109I	GCAGC	2 cut(s)	1685, 1768
LweI	GCATC	2 cut(s)	460, 1768
MaeI	CTAG	3 cut(s)	242, 1064, 1608
MaeII	ACGT	6 cut(s)	80, 414, 671, 1207, 1246, 1950
MbiI	CCGCTC	3 cut(s)	729, 1727, 2097
MboII	GAAGA	5 cut(s)	628, 1624, 2125, 2173, 2176
MfeI	CAATTG	1 cut(s)	1699
MflI	RGATCY	4 cut(s)	244, 486, 1408, 1518
MhlI	GDGCHC	7 cut(s)	369, 568, 1587, 1709, 1813, 1904, 2270
MlsI	TGGCCA	3 cut(s)	767, 992, 1824
MluCI	AATT	5 cut(s)	1221, 1501, 1699, 2048, 2222
MluNI	TGGCCA	3 cut(s)	767, 992, 1824
Mly113I	GGCGCC	1 cut(s)	749
MmeI	TCCRAC	5 cut(s)	255, 403, 1000, 1216, 1442
Mox20I	TGGCCA	3 cut(s)	767, 992, 1824
MscI	TGGCCA	3 cut(s)	767, 992, 1824
MseI	TTAA	5 cut(s)	38, 1239, 1551, 2124, 2262
MslI	CAYNNNNRTG	6 cut(s)	926, 1088, 1112, 1662, 1897, 2183
Msp20I	TGGCCA	3 cut(s)	767, 992, 1824
MspA1I	CMGCKG	2 cut(s)	1104, 1277
MunI	CAATTG	1 cut(s)	1699
Mva1269I	GAATGC	1 cut(s)	483
MvaI	CCWGG	6 cut(s)	350, 389, 401, 496, 1545, 1980
MvnI	CGCG	7 cut(s)	725, 758, 760, 818, 1272, 1277, 1313
NarI	GGCGCC	1 cut(s)	749
NciI	CCSGG	7 cut(s)	568, 688, 1040, 1049, 1182, 1854, 2106
NcoI	CCATGG	1 cut(s)	927
NmeAIII	GCCGAG	3 cut(s)	658, 666, 935
NmuCI	GTSAC	6 cut(s)	134, 1092, 1340, 1379, 1846, 2176
NsbI	TGCGCA	1 cut(s)	1960
NspI	RCATGY	2 cut(s)	57, 1959
NspV	TTCGAA	1 cut(s)	1799
OliI	CACNNNNGTG	3 cut(s)	1088, 1662, 2183
PagI	TCATGA	2 cut(s)	1011, 1731
PceI	AGGCCT	1 cut(s)	404
PciI	ACATGT	1 cut(s)	53
PcsI	WCGNNNNNNNCGW	2 cut(s)	294, 698
PctI	GAATGC	1 cut(s)	483
PfeI	GAWTC	3 cut(s)	278, 1414, 1801
PfoI	TCCNGGA	2 cut(s)	387, 1978
PinAI	ACCGGT	2 cut(s)	1077, 1126
PluTI	GGCGCC	1 cut(s)	752
PmaCI	CACGTG	1 cut(s)	1247
PmlI	CACGTG	1 cut(s)	1247
Ppu21I	YACGTR	2 cut(s)	1208, 1247
PpuMI	RGGWCCY	2 cut(s)	391, 663
PscI	ACATGT	1 cut(s)	53
Psp1406I	AACGTT	1 cut(s)	1950
Psp5II	RGGWCCY	2 cut(s)	391, 663
Psp6I	CCWGG	6 cut(s)	348, 387, 399, 494, 1543, 1978
PspCI	CACGTG	1 cut(s)	1247
PspGI	CCWGG	6 cut(s)	348, 387, 399, 494, 1543, 1978
PspOMI	GGGCCC	1 cut(s)	1583
PspPPI	RGGWCCY	2 cut(s)	391, 663
PstI	CTGCAG	1 cut(s)	2071
PstNI	CAGNNNCTG	2 cut(s)	138, 394
PsuI	RGATCY	4 cut(s)	244, 486, 1408, 1518
RsaI	GTAC	9 cut(s)	83, 143, 890, 1206, 1269, 1639, 1745, 1970, 2171
RsaNI	GTAC	9 cut(s)	82, 142, 889, 1205, 1268, 1638, 1744, 1969, 2170
RseI	CAYNNNNRTG	6 cut(s)	926, 1088, 1112, 1662, 1897, 2183
SacII	CCGCGG	1 cut(s)	1278
SaqAI	TTAA	5 cut(s)	38, 1239, 1551, 2124, 2262
ScaI	AGTACT	1 cut(s)	1970
SduI	GDGCHC	7 cut(s)	369, 568, 1587, 1709, 1813, 1904, 2270
SfaNI	GCATC	2 cut(s)	460, 1768
SfcI	CTRYAG	3 cut(s)	1737, 2067, 2151
SfiI	GGCCNNNNNGGCC	1 cut(s)	989
SfoI	GGCGCC	1 cut(s)	750
Sfr303I	CCGCGG	1 cut(s)	1278
SfuI	TTCGAA	1 cut(s)	1799
SgrAI	CRCCGGYG	1 cut(s)	1085
SgrBI	CCGCGG	1 cut(s)	1278
SinI	GGWCC	9 cut(s)	391, 646, 663, 786, 804, 879, 1036, 1541, 2099
SmiMI	CAYNNNNRTG	6 cut(s)	926, 1088, 1112, 1662, 1897, 2183
SmlI	CTYRAG	1 cut(s)	2131
SmoI	CTYRAG	1 cut(s)	2131
Sse9I	AATT	5 cut(s)	1221, 1501, 1699, 2048, 2222
SseBI	AGGCCT	1 cut(s)	404
SspDI	GGCGCC	1 cut(s)	748
SspMI	CTAG	3 cut(s)	242, 1064, 1608
StuI	AGGCCT	1 cut(s)	404
StyI	CCWWGG	3 cut(s)	927, 1032, 2193
TaaI	ACNGT	9 cut(s)	134, 510, 1018, 1340, 1404, 1447, 2042, 2152, 2176
TaiI	ACGT	6 cut(s)	83, 417, 674, 1210, 1249, 1953
TaqI	TCGA	9 cut(s)	297, 840, 1799, 1830, 1838, 1874, 1920, 2044, 2231
TasI	AATT	5 cut(s)	1221, 1501, 1699, 2048, 2222
TatI	WGTACW	2 cut(s)	1968, 2169
TfiI	GAWTC	3 cut(s)	278, 1414, 1801
Tru1I	TTAA	5 cut(s)	38, 1239, 1551, 2124, 2262
Tru9I	TTAA	5 cut(s)	38, 1239, 1551, 2124, 2262
TscAI	CASTG	4 cut(s)	139, 515, 1003, 1594
TseFI	GTSAC	6 cut(s)	134, 1092, 1340, 1379, 1846, 2176
TseI	GCWGC	2 cut(s)	1673, 1781
Tsp45I	GTSAC	6 cut(s)	134, 1092, 1340, 1379, 1846, 2176
TspDTI	ATGAA	3 cut(s)	110, 629, 1989
TspGWI	ACGGA	4 cut(s)	52, 858, 1763, 1794
TspRI	CASTG	4 cut(s)	139, 515, 1003, 1594
VpaK11BI	GGWCC	9 cut(s)	391, 646, 663, 786, 804, 879, 1036, 1541, 2099
XagI	CCTNNNNNAGG	1 cut(s)	398
XapI	RAATTY	2 cut(s)	1501, 2222
XbaI	TCTAGA	1 cut(s)	241
XceI	RCATGY	2 cut(s)	57, 1959
XspI	CTAG	3 cut(s)	242, 1064, 1608
ZraI	GACGTC	1 cut(s)	415
ZrmI	AGTACT	1 cut(s)	1970

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.