Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0013828

Physical Location & Seq

Genomic Coordinates Reverse (-)

84358555 .. 84361538

Gene Structure 2984 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00146490.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGCCTCCTCCGAGGCCCAGTTCTGGTTCGTAGCTTTAACACTTGTTCTGCCATGTCTATCCGTAACCGCCAAACAGACCTACATAGTTCAGATGAAGCACCATTCCAAACCTTCCTCATTCGCCACCCACAGTGACTGGTACTCCGCCAACCTCCAAGCTCTCTCCTCTGACTCTGACTCTGACTCTGACTCTGACGCCCTCCTCTACACCTACGACGCCGCCTACCACGGCTTCGCCGCTTCTCTAGATCCCGAACAGGCCGACACTCTGCGGCAGTCGGAATCTGTAATCGGGGTATTCGAGGATACTTTATACAACCTCCACACCACACGAACACCCGAGTTTCTGGGCCTGGAAACCGCTAATGGGCTCTGGGCCGGACACTCGCTCCAGGACGTGAACCAGGCCTCCAAAGACGTCATCGTCGGAGTGCTGGACACCGGAGTCTGGCCGGAGTCCAAGAGCTTCAACGATGCGGGAATGCCAGAGATCCCGTCCAGGTGGCGGGGACAGTGCGAGTCTGGAACCGATTTCAGCCCCTCTCTCTGCAACAAGAAGCTGATCGGAGCCCGGAGCTTTTCTAAAGGCTACCGCATGGCCTCCGGCGGAAGCTACATGAAGAAACCGAAAGAGGCCGAGTCGCCGAGGGACCAAGACGGCCACGGGACCCACACGTCCAGCACCGCCGCCGGGTCTCTGGTGGCGAACGCCAGCCTGCTGGGTTACGCGAGCGGGACTGCGCGTGGGATGGCGCCTCACGCGCGGGTGGCCACCTACAAGGTCTGCTGGACCACGGGTTGCTTCGGGTCCGATATCCTCGCGGGTATGGATCGGGCCATCCTCGACGGAGTTGATGTGCTGTCGCTCTCTTTGGGCGGCGGGTCCGCCCCGTACTTTAGGGACACAATCGCAATAGGAGCTTTCACCGCCATGGAGAGGGGCATTTTCGTCTCTTGTTCGGCCGGAAATAGCGGGCCAAGTAGGGCCTCATTGGCCAACACAGCCCCGTGGATCATGACGGTTGGAGCCGGAACCTTGGACCGGGACTTCCCGGCTTTCGCTTTGCTCGGAAACAAAAACCGGTTCACCGGCGTGTCACTTTACAGTGGCACCGGAATGGGGTCGAAACCGGTGGGGCTGGTTTACAACAAGGGGACTAACGGCTCCAGCAATCTGTGCTTGCCCGGTTCGCTCCAACCGGAGTCGGTACGTGGGAAAGTGGTGATTTGCGACAGGGGAGTTAACGCACGTGTCGAGAAAGGTGGAGTTGTACGCGCCGCGGGTGGGGTTGGGATGATACTCGCCAACACCGCCGCGAGCGGGGAGGAAATGGTGGCGGACAGTCACTTGTTACCGGCTGTTGCGGTTGGGAGGAAAGTGGGTGACTTGATAAGGCAGTATGCACAGTCAGATCCGAATCCGACGGCGGTGATTAGCTTTGGTGGGACGGTGCTGAATGTGCGGCCGTCGCCGGTCGTGGCGGCGTTTAGCTCTCGTGGGCCAAATTTGGTTACTCCCCAGATCTTGAAGCCCGATGTGATTGGTCCAGGGGTTAATATCTTGGCTGCATGGTCAGAGGCTATTGGGCCCACTGGGCTTGCGGAGGACAGTAGGAAGAGTCAGTTCAACATCATGTCAGGTACATCTATGTCATGCCCACACATAAGTGGGCTTGCAGCATTGCTCAAAGCGGCCCATCCCAATTGGAGCCCAAGTGCAATCAAATCCGCTCTCATGACTACAGCCTACACACATGACAACACCATGTCTCCTCTCCGTGATGCTGCCGGTGGCACATTTTCGAATCCGTGGGCACATGGTTCTGGCCATGTCGATCCCTCGAAAGCTGTCACGCCGGGTCTTGTGTACGACATTTCGAGCGATGACTATGTTGCATTTTTGTGCTCGTTGGACTACACCATCGATCATGTCCAAGCCATTGCTAAGAGAAACGTTACATGTGCAAGAAAGTACTCTGATCCTGGACAACTCAACTACCCTTCGTTCTCAGTTGTGTTTGGGAACAAGAGGGTCGTGAGATACAGTCGAGAATTGACAAATGTAGGGACTGCAGGTTCTTTATACAAGGTCATTGTGAGCGGACCACCCGGAGTGAAGACTATTGTTAAACCCTCAAGGCTTTTCTTTGCAACTGTAGGGGAGAAGAAGAAGTACACAGTCACCTTTGTGTCTGCCAAGGGCGGCAGTAGAACATCAAGGTCAGAATTTGGTTCAATCGTGTGGGCAAACCCCCTACACCTGGTTAAGAGCCCGGTTGCTTTTGCATGGACGCTGTTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005911 GO:0006508 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009505 GO:0009506 GO:0012505 GO:0016787 GO:0017171 GO:0019538 GO:0030054 GO:0030312 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0055044 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

767

Amino Acids

80.93

Weight (kDa)

8.67

Isoelectric Point (pI)

35.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	27 - 109	2.4e-19	Peptidase inhibitor I9
Peptidase_S8	PF00082	139 - 587	5.3e-46	Subtilase family
PA	PF02225	382 - 464	5.9e-12	PA domain
fn3_6	PF17766	664 - 761	1.9e-23	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0013828)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G05920
fragaria_vesca	FvH4_1g08840
malus_domestica	MD02G1093500.v1.1 MD15G1218800.v1.1
prunus_persica	Prupe.7G197100_v2.0.a1
pyrus_communis	pycom02g07370 pycom15g19400
rosa_chinensis	RchiOBHm_Chr2g0095311
rosa_laevigata	RLG00000016553
rosa_multiflora	Rmu_ssc0000183.1_g000049
rosa_roxburghii	Rroxscaffold_2G00146490
rosa_rugosa	Rorug02G0049200
rosa_samantha	Rh2AG097600 Rh2BG098800 Rh2CG100900 Rh2DG098500
rosa_wichuraiana	Rw2G007360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	425, 446, 676
AatII	GACGTC	1 cut(s)	423
Acc36I	ACCTGC	1 cut(s)	2066
AccB1I	GGYRCC	2 cut(s)	754, 1112
AccBSI	CCGCTC	4 cut(s)	735, 1323, 1733, 2103
AccII	CGCG	8 cut(s)	731, 745, 764, 766, 824, 1278, 1283, 1319
AclI	AACGTT	1 cut(s)	1956
AclWI	GGATC	7 cut(s)	245, 487, 840, 1022, 1409, 1832, 1976
AcoI	YGGCCR	7 cut(s)	452, 661, 771, 963, 996, 1466, 1828
AcsI	RAATTY	2 cut(s)	1507, 2228
AcvI	CACGTG	1 cut(s)	1253
AcyI	GRCGYC	4 cut(s)	198, 219, 420, 755
AfaI	GTAC	8 cut(s)	143, 896, 1212, 1275, 1645, 1871, 1976, 2177
AflIII	ACRYGT	3 cut(s)	675, 1252, 1961
AgeI	ACCGGT	2 cut(s)	1083, 1132
AgsI	TTSAA	4 cut(s)	472, 1531, 1630, 2238
AjiI	CACGTC	2 cut(s)	400, 678
AjnI	CCWGG	7 cut(s)	354, 393, 405, 500, 1549, 1984, 2262
AleI	CACNNNNGTG	3 cut(s)	1094, 1668, 2189
AloI	GAACNNNNNNTCC	4 cut(s)	395, 427, 2062, 2094
Alw21I	GWGCWC	1 cut(s)	1910
Alw26I	GTCTC	3 cut(s)	702, 958, 1776
AlwI	GGATC	7 cut(s)	245, 487, 840, 1022, 1409, 1832, 1976
AlwNI	CAGNNNCTG	1 cut(s)	138
Ama87I	CYCGRG	1 cut(s)	341
ApaI	GGGCCC	1 cut(s)	1593
ApeKI	GCWGC	3 cut(s)	1568, 1679, 1787
ApoI	RAATTY	2 cut(s)	1507, 2228
AsiGI	ACCGGT	2 cut(s)	1083, 1132
AspLEI	GCGC	4 cut(s)	745, 757, 766, 1280
AsuC2I	CCSGG	8 cut(s)	574, 694, 1046, 1055, 1188, 1860, 2112, 2276
AsuHPI	GGTGA	6 cut(s)	919, 1081, 1237, 1397, 1444, 2176
AsuII	TTCGAA	1 cut(s)	1805
AvaI	CYCGRG	1 cut(s)	341
AvaII	GGWCC	8 cut(s)	652, 669, 792, 810, 885, 1042, 1547, 2105
BaeGI	GKGCMC	2 cut(s)	1593, 1819
BalI	TGGCCA	3 cut(s)	773, 998, 1830
BanI	GGYRCC	2 cut(s)	754, 1112
BanII	GRGCYC	5 cut(s)	375, 574, 1593, 1715, 2276
BarI	GAAGNNNNNNTAC	2 cut(s)	2159, 2191
BauI	CACGAG	1 cut(s)	1497
BbrPI	CACGTG	1 cut(s)	1253
BbsI	GAAGAC	1 cut(s)	2126
Bbv12I	GWGCWC	1 cut(s)	1910
BbvI	GCAGC	3 cut(s)	1555, 1691, 1774
BccI	CCATC	4 cut(s)	745, 848, 1707, 1931
BceAI	ACGGC	5 cut(s)	247, 676, 1180, 1443, 1453
BciT130I	CCWGG	7 cut(s)	356, 395, 407, 502, 1551, 1986, 2264
BciVI	GTATCC	1 cut(s)	301
BcnI	CCSGG	8 cut(s)	574, 694, 1046, 1055, 1188, 1860, 2112, 2276
BcoDI	GTCTC	3 cut(s)	702, 958, 1776
BfaI	CTAG	1 cut(s)	248
BfmI	CTRYAG	3 cut(s)	1743, 2073, 2157
BfoI	RGCGCY	1 cut(s)	758
BfuAI	ACCTGC	1 cut(s)	2066
BfuI	GTATCC	1 cut(s)	301
BglI	GCCNNNNNGGC	2 cut(s)	995, 1597
BglII	AGATCT	1 cut(s)	1524
BmcAI	AGTACT	1 cut(s)	1976
Bme18I	GGWCC	8 cut(s)	652, 669, 792, 810, 885, 1042, 1547, 2105
BmeT110I	CYCGRG	1 cut(s)	341
BmgBI	CACGTC	2 cut(s)	400, 678
BmrI	ACTGGG	2 cut(s)	13, 1605
BmsI	GCATC	2 cut(s)	466, 1774
BmuI	ACTGGG	2 cut(s)	13, 1605
BpiI	GAAGAC	1 cut(s)	2126
BpmI	CTGGAG	2 cut(s)	377, 1153
Bpu14I	TTCGAA	1 cut(s)	1805
BpuEI	CTTGAG	1 cut(s)	2122
BpuMI	CCSGG	8 cut(s)	574, 694, 1046, 1055, 1188, 1860, 2112, 2276
Bsa29I	ATCGAT	1 cut(s)	1926
BsaAI	YACGTR	2 cut(s)	1214, 1253
BsaBI	GATNNNNATC	1 cut(s)	1419
BsaHI	GRCGYC	4 cut(s)	198, 219, 420, 755
BsaI	GGTCTC	1 cut(s)	702
BsaWI	WCCGGW	5 cut(s)	443, 1083, 1115, 1132, 1201
Bse118I	RCCGGY	6 cut(s)	1083, 1091, 1132, 1357, 1474, 1790
Bse1I	ACTGG	3 cut(s)	19, 143, 1600
Bse3DI	GCAATG	2 cut(s)	1682, 1941
Bse8I	GATNNNNATC	1 cut(s)	1419
BseBI	CCWGG	7 cut(s)	356, 395, 407, 502, 1551, 1986, 2264
BseCI	ATCGAT	1 cut(s)	1926
BseGI	GGATG	4 cut(s)	756, 840, 1302, 1699
BseJI	GATNNNNATC	1 cut(s)	1419
BseMI	GCAATG	2 cut(s)	1682, 1941
BseMII	CTCAG	1 cut(s)	2025
BseNI	ACTGG	3 cut(s)	19, 143, 1600
BseRI	GAGGAG	3 cut(s)	157, 194, 1764
BseSI	GKGCMC	2 cut(s)	1593, 1819
BseX3I	CGGCCG	2 cut(s)	963, 1466
BseXI	GCAGC	3 cut(s)	1555, 1691, 1774
BseYI	CCCAGC	1 cut(s)	721
Bsh1236I	CGCG	8 cut(s)	731, 745, 764, 766, 824, 1278, 1283, 1319
Bsh1285I	CGRYCG	3 cut(s)	966, 1469, 1479
BshNI	GGYRCC	2 cut(s)	754, 1112
BshTI	ACCGGT	2 cut(s)	1083, 1132
BshVI	ATCGAT	1 cut(s)	1926
BsiEI	CGRYCG	3 cut(s)	966, 1469, 1479
BsiHKAI	GWGCWC	1 cut(s)	1910
BsiHKCI	CYCGRG	1 cut(s)	341
BslFI	GGGAC	9 cut(s)	525, 665, 682, 751, 917, 1061, 1171, 1462, 2083
BsmAI	GTCTC	3 cut(s)	702, 958, 1776
BsmBI	CGTCTC	1 cut(s)	958
BsmFI	GGGAC	9 cut(s)	525, 665, 682, 751, 917, 1061, 1171, 1462, 2083
BsmI	GAATGC	1 cut(s)	489
Bso31I	GGTCTC	1 cut(s)	702
BsoBI	CYCGRG	1 cut(s)	341
Bsp119I	TTCGAA	1 cut(s)	1805
Bsp120I	GGGCCC	1 cut(s)	1589
Bsp1286I	GDGCHC	7 cut(s)	375, 574, 1593, 1715, 1819, 1910, 2276
Bsp19I	CCATGG	1 cut(s)	933
BspCNI	CTCAG	1 cut(s)	2024
BspDI	ATCGAT	1 cut(s)	1926
BspFNI	CGCG	8 cut(s)	731, 745, 764, 766, 824, 1278, 1283, 1319
BspHI	TCATGA	2 cut(s)	1017, 1737
BspMAI	CTGCAG	1 cut(s)	2077
BspMI	ACCTGC	1 cut(s)	2066
BspPI	GGATC	7 cut(s)	245, 487, 840, 1022, 1409, 1832, 1976
BspT104I	TTCGAA	1 cut(s)	1805
BspT107I	GGYRCC	2 cut(s)	754, 1112
BspTNI	GGTCTC	1 cut(s)	702
BsrBI	CCGCTC	4 cut(s)	735, 1323, 1733, 2103
BsrDI	GCAATG	2 cut(s)	1682, 1941
BsrFI	RCCGGY	6 cut(s)	1083, 1091, 1132, 1357, 1474, 1790
BsrI	ACTGG	3 cut(s)	19, 143, 1600
BssAI	RCCGGY	6 cut(s)	1083, 1091, 1132, 1357, 1474, 1790
BssNI	GRCGYC	4 cut(s)	198, 219, 420, 755
BssSI	CACGAG	1 cut(s)	1497
BssT1I	CCWWGG	3 cut(s)	933, 1038, 2199
Bst2BI	CACGAG	1 cut(s)	1497
Bst2UI	CCWGG	7 cut(s)	356, 395, 407, 502, 1551, 1986, 2264
Bst6I	CTCTTC	1 cut(s)	1613
BstACI	GRCGYC	4 cut(s)	198, 219, 420, 755
BstAPI	GCANNNNNTGC	1 cut(s)	1179
BstBAI	YACGTR	2 cut(s)	1214, 1253
BstBI	TTCGAA	1 cut(s)	1805
BstC8I	GCNNGC	8 cut(s)	715, 719, 733, 977, 1184, 1321, 1602, 1677
BstDEI	CTNAG	2 cut(s)	1947, 2011
BstDSI	CCRYGG	7 cut(s)	229, 664, 795, 933, 1010, 1281, 1811
BstF5I	GGATG	4 cut(s)	756, 840, 1302, 1699
BstFNI	CGCG	8 cut(s)	731, 745, 764, 766, 824, 1278, 1283, 1319
BstH2I	RGCGCY	1 cut(s)	758
BstHHI	GCGC	4 cut(s)	745, 757, 766, 1280
BstMAI	GTCTC	3 cut(s)	702, 958, 1776
BstMCI	CGRYCG	3 cut(s)	966, 1469, 1479
BstNI	CCWGG	7 cut(s)	356, 395, 407, 502, 1551, 1986, 2264
BstNSI	RCATGY	1 cut(s)	1965
BstSFI	CTRYAG	3 cut(s)	1743, 2073, 2157
BstSLI	GKGCMC	2 cut(s)	1593, 1819
BstUI	CGCG	8 cut(s)	731, 745, 764, 766, 824, 1278, 1283, 1319
BstV1I	GCAGC	3 cut(s)	1555, 1691, 1774
BstV2I	GAAGAC	1 cut(s)	2126
BstX2I	RGATCY	4 cut(s)	250, 492, 1414, 1524
BstXI	CCANNNNNNTGG	1 cut(s)	721
BstYI	RGATCY	4 cut(s)	250, 492, 1414, 1524
BstZI	CGGCCG	2 cut(s)	963, 1466
Bsu15I	ATCGAT	1 cut(s)	1926
BsuI	GTATCC	1 cut(s)	301
BsuTUI	ATCGAT	1 cut(s)	1926
BtgI	CCRYGG	7 cut(s)	229, 664, 795, 933, 1010, 1281, 1811
BtgZI	GCGATG	1 cut(s)	1899
BtrI	CACGTC	2 cut(s)	400, 678
BtsCI	GGATG	4 cut(s)	756, 840, 1302, 1699
BtsIMutI	CAGTG	4 cut(s)	139, 521, 1114, 1593
BveI	ACCTGC	1 cut(s)	2066
Cac8I	GCNNGC	8 cut(s)	715, 719, 733, 977, 1184, 1321, 1602, 1677
CaiI	CAGNNNCTG	1 cut(s)	138
CciI	TCATGA	2 cut(s)	1017, 1737
CfoI	GCGC	4 cut(s)	745, 757, 766, 1280
Cfr10I	RCCGGY	6 cut(s)	1083, 1091, 1132, 1357, 1474, 1790
Cfr42I	CCGCGG	1 cut(s)	1284
ClaI	ATCGAT	1 cut(s)	1926
CseI	GACGC	2 cut(s)	206, 227
CsiI	ACCWGGT	1 cut(s)	2262
Csp6I	GTAC	8 cut(s)	142, 895, 1211, 1274, 1644, 1870, 1975, 2176
CspAI	ACCGGT	2 cut(s)	1083, 1132
CspCI	CAANNNNNGTGG	2 cut(s)	1582, 1617
CviQI	GTAC	8 cut(s)	142, 895, 1211, 1274, 1644, 1870, 1975, 2176
DdeI	CTNAG	2 cut(s)	1947, 2011
DinI	GGCGCC	1 cut(s)	756
DrdI	GACNNNNNNGTC	3 cut(s)	425, 446, 676
DseDI	GACNNNNNNGTC	3 cut(s)	425, 446, 676
EaeI	YGGCCR	7 cut(s)	452, 661, 771, 963, 996, 1466, 1828
EagI	CGGCCG	2 cut(s)	963, 1466
Eam1104I	CTCTTC	1 cut(s)	1613
EarI	CTCTTC	1 cut(s)	1613
EciI	GGCGGA	4 cut(s)	136, 624, 877, 1355
EclXI	CGGCCG	2 cut(s)	963, 1466
Eco130I	CCWWGG	3 cut(s)	933, 1038, 2199
Eco147I	AGGCCT	1 cut(s)	410
Eco24I	GRGCYC	5 cut(s)	375, 574, 1593, 1715, 2276
Eco31I	GGTCTC	1 cut(s)	702
Eco32I	GATATC	1 cut(s)	817
Eco47I	GGWCC	8 cut(s)	652, 669, 792, 810, 885, 1042, 1547, 2105
Eco52I	CGGCCG	2 cut(s)	963, 1466
Eco72I	CACGTG	1 cut(s)	1253
Eco88I	CYCGRG	1 cut(s)	341
EcoO109I	RGGNCCY	2 cut(s)	669, 987
EcoRII	CCWGG	7 cut(s)	354, 393, 405, 500, 1549, 1984, 2262
EcoRV	GATATC	1 cut(s)	817
EcoT14I	CCWWGG	3 cut(s)	933, 1038, 2199
EcoT38I	GRGCYC	5 cut(s)	375, 574, 1593, 1715, 2276
EgeI	GGCGCC	1 cut(s)	756
EheI	GGCGCC	1 cut(s)	756
ErhI	CCWWGG	3 cut(s)	933, 1038, 2199
Esp3I	CGTCTC	1 cut(s)	958
FaqI	GGGAC	9 cut(s)	525, 665, 682, 751, 917, 1061, 1171, 1462, 2083
FauI	CCCGC	9 cut(s)	472, 501, 728, 759, 817, 875, 968, 1276, 1316
FokI	GGATG	4 cut(s)	763, 827, 1309, 1686
FriOI	GRGCYC	5 cut(s)	375, 574, 1593, 1715, 2276
FspBI	CTAG	1 cut(s)	248
GlaI	GCGC	4 cut(s)	744, 756, 765, 1279
GsaI	CCCAGC	1 cut(s)	725
GsuI	CTGGAG	2 cut(s)	377, 1153
HaeII	RGCGCY	1 cut(s)	758
HgaI	GACGC	2 cut(s)	206, 227
HhaI	GCGC	4 cut(s)	745, 757, 766, 1280
Hin1I	GRCGYC	4 cut(s)	198, 219, 420, 755
Hin6I	GCGC	4 cut(s)	743, 755, 764, 1278
HinP1I	GCGC	4 cut(s)	743, 755, 764, 1278
HincII	GTYRAC	1 cut(s)	1246
HindII	GTYRAC	1 cut(s)	1246
HpaI	GTTAAC	1 cut(s)	1246
HphI	GGTGA	6 cut(s)	919, 1081, 1237, 1397, 1444, 2176
Hpy166II	GTNNAC	6 cut(s)	403, 1089, 1147, 1246, 1870, 2178
Hpy188III	TCNNGA	9 cut(s)	248, 254, 525, 1018, 1258, 1528, 1738, 2038, 2051
Hpy8I	GTNNAC	6 cut(s)	403, 1089, 1147, 1246, 1870, 2178
Hpy99I	CGWCG	5 cut(s)	221, 431, 851, 1429, 1474
HpyAV	CCTTC	2 cut(s)	123, 2013
HpyCH4IV	ACGT	6 cut(s)	399, 420, 677, 1213, 1252, 1956
HpyF3I	CTNAG	2 cut(s)	1947, 2011
HpySE526I	ACGT	6 cut(s)	399, 420, 677, 1213, 1252, 1956
Hsp92I	GRCGYC	4 cut(s)	198, 219, 420, 755
HspAI	GCGC	4 cut(s)	743, 755, 764, 1278
KasI	GGCGCC	1 cut(s)	754
KflI	GGGWCCC	1 cut(s)	669
KspAI	GTTAAC	1 cut(s)	1246
KspI	CCGCGG	1 cut(s)	1284
LmnI	GCTCC	8 cut(s)	396, 569, 576, 920, 1028, 1172, 1200, 1710
Lsp1109I	GCAGC	3 cut(s)	1555, 1691, 1774
LweI	GCATC	2 cut(s)	466, 1774
MabI	ACCWGGT	1 cut(s)	2262
MaeI	CTAG	1 cut(s)	248
MaeII	ACGT	6 cut(s)	399, 420, 677, 1213, 1252, 1956
MbiI	CCGCTC	4 cut(s)	735, 1323, 1733, 2103
MboII	GAAGA	5 cut(s)	634, 1630, 2131, 2179, 2182
MfeI	CAATTG	1 cut(s)	1705
MflI	RGATCY	4 cut(s)	250, 492, 1414, 1524
MhlI	GDGCHC	7 cut(s)	375, 574, 1593, 1715, 1819, 1910, 2276
MlsI	TGGCCA	3 cut(s)	773, 998, 1830
MluCI	AATT	4 cut(s)	1507, 1705, 2054, 2228
MluNI	TGGCCA	3 cut(s)	773, 998, 1830
Mly113I	GGCGCC	1 cut(s)	755
MmeI	TCCRAC	6 cut(s)	261, 409, 1006, 1222, 1448, 1893
Mox20I	TGGCCA	3 cut(s)	773, 998, 1830
MscI	TGGCCA	3 cut(s)	773, 998, 1830
MseI	TTAA	5 cut(s)	38, 1245, 1557, 2130, 2268
MslI	CAYNNNNRTG	6 cut(s)	932, 1094, 1118, 1668, 1903, 2189
Msp20I	TGGCCA	3 cut(s)	773, 998, 1830
MspA1I	CMGCKG	1 cut(s)	1283
MunI	CAATTG	1 cut(s)	1705
Mva1269I	GAATGC	1 cut(s)	489
MvaI	CCWGG	7 cut(s)	356, 395, 407, 502, 1551, 1986, 2264
MvnI	CGCG	8 cut(s)	731, 745, 764, 766, 824, 1278, 1283, 1319
NarI	GGCGCC	1 cut(s)	755
NciI	CCSGG	8 cut(s)	574, 694, 1046, 1055, 1188, 1860, 2112, 2276
NcoI	CCATGG	1 cut(s)	933
NmeAIII	GCCGAG	2 cut(s)	664, 672
NmuCI	GTSAC	6 cut(s)	134, 1098, 1346, 1385, 1852, 2182
NspI	RCATGY	1 cut(s)	1965
NspV	TTCGAA	1 cut(s)	1805
OliI	CACNNNNGTG	3 cut(s)	1094, 1668, 2189
PagI	TCATGA	2 cut(s)	1017, 1737
PceI	AGGCCT	1 cut(s)	410
PciI	ACATGT	1 cut(s)	1961
PcsI	WCGNNNNNNNCGW	2 cut(s)	300, 1254
PctI	GAATGC	1 cut(s)	489
PfeI	GAWTC	3 cut(s)	284, 1420, 1807
PfoI	TCCNGGA	2 cut(s)	393, 1984
PinAI	ACCGGT	2 cut(s)	1083, 1132
PluTI	GGCGCC	1 cut(s)	758
PmaCI	CACGTG	1 cut(s)	1253
PmlI	CACGTG	1 cut(s)	1253
Ppu21I	YACGTR	2 cut(s)	1214, 1253
PpuMI	RGGWCCY	1 cut(s)	669
PscI	ACATGT	1 cut(s)	1961
Psp1406I	AACGTT	1 cut(s)	1956
Psp5II	RGGWCCY	1 cut(s)	669
Psp6I	CCWGG	7 cut(s)	354, 393, 405, 500, 1549, 1984, 2262
PspCI	CACGTG	1 cut(s)	1253
PspFI	CCCAGC	1 cut(s)	721
PspGI	CCWGG	7 cut(s)	354, 393, 405, 500, 1549, 1984, 2262
PspOMI	GGGCCC	1 cut(s)	1589
PspPPI	RGGWCCY	1 cut(s)	669
PstI	CTGCAG	1 cut(s)	2077
PstNI	CAGNNNCTG	1 cut(s)	138
PsuI	RGATCY	4 cut(s)	250, 492, 1414, 1524
RsaI	GTAC	8 cut(s)	143, 896, 1212, 1275, 1645, 1871, 1976, 2177
RsaNI	GTAC	8 cut(s)	142, 895, 1211, 1274, 1644, 1870, 1975, 2176
RseI	CAYNNNNRTG	6 cut(s)	932, 1094, 1118, 1668, 1903, 2189
SacII	CCGCGG	1 cut(s)	1284
SaqAI	TTAA	5 cut(s)	38, 1245, 1557, 2130, 2268
ScaI	AGTACT	1 cut(s)	1976
SduI	GDGCHC	7 cut(s)	375, 574, 1593, 1715, 1819, 1910, 2276
SexAI	ACCWGGT	1 cut(s)	2262
SfaNI	GCATC	2 cut(s)	466, 1774
SfcI	CTRYAG	3 cut(s)	1743, 2073, 2157
SfiI	GGCCNNNNNGGCC	1 cut(s)	995
SfoI	GGCGCC	1 cut(s)	756
Sfr303I	CCGCGG	1 cut(s)	1284
SfuI	TTCGAA	1 cut(s)	1805
SgrAI	CRCCGGYG	1 cut(s)	1091
SgrBI	CCGCGG	1 cut(s)	1284
SinI	GGWCC	8 cut(s)	652, 669, 792, 810, 885, 1042, 1547, 2105
SmiMI	CAYNNNNRTG	6 cut(s)	932, 1094, 1118, 1668, 1903, 2189
SmlI	CTYRAG	1 cut(s)	2137
SmoI	CTYRAG	1 cut(s)	2137
Sse9I	AATT	4 cut(s)	1507, 1705, 2054, 2228
SseBI	AGGCCT	1 cut(s)	410
SspDI	GGCGCC	1 cut(s)	754
SspMI	CTAG	1 cut(s)	248
StuI	AGGCCT	1 cut(s)	410
StyI	CCWWGG	3 cut(s)	933, 1038, 2199
TaiI	ACGT	6 cut(s)	402, 423, 680, 1216, 1255, 1959
TasI	AATT	4 cut(s)	1507, 1705, 2054, 2228
TatI	WGTACW	2 cut(s)	1974, 2175
TfiI	GAWTC	3 cut(s)	284, 1420, 1807
Tru1I	TTAA	5 cut(s)	38, 1245, 1557, 2130, 2268
Tru9I	TTAA	5 cut(s)	38, 1245, 1557, 2130, 2268
TscAI	CASTG	4 cut(s)	139, 521, 1114, 1600
TseFI	GTSAC	6 cut(s)	134, 1098, 1346, 1385, 1852, 2182
TseI	GCWGC	3 cut(s)	1568, 1679, 1787
Tsp45I	GTSAC	6 cut(s)	134, 1098, 1346, 1385, 1852, 2182
TspDTI	ATGAA	2 cut(s)	110, 635
TspGWI	ACGGA	4 cut(s)	52, 864, 1769, 1800
TspRI	CASTG	4 cut(s)	139, 521, 1114, 1600
VpaK11BI	GGWCC	8 cut(s)	652, 669, 792, 810, 885, 1042, 1547, 2105
XapI	RAATTY	2 cut(s)	1507, 2228
XbaI	TCTAGA	1 cut(s)	247
XceI	RCATGY	1 cut(s)	1965
XspI	CTAG	1 cut(s)	248
ZraI	GACGTC	1 cut(s)	421
ZrmI	AGTACT	1 cut(s)	1976

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.