Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb1

Orthogroup ID

OG0003124

Physical Location & Seq

Genomic Coordinates Reverse (-)

14473946 .. 14480896

Gene Structure 6951 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_1g22570.t4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1752 bp

ATGGCGACTGTGTGCTCTCCTCACACCATCTCACGCGCCGCCGTTTCTTCTTCTTCAGTCAAATACTCTCCGTCCCAATCTCAGCTCCTATTCCGTTCACACTTCCCGAACCGCCGCCATGACAGCTCAAGCCTCCACATTACTGCTCCCAATCCCCGCGCCGCCACCAAAGGCCGCGTTCTCTGCTCCCAAAACCCTAACCCTACCCCCACGCGCCGCCCCGACTACGTCCCGAACCGCATCTCCGACCCGAACTACGTCCGCATCTTCGACACCACTCTCCGCGACGGCGAGCAGTCCCCGGGAGCCTCGCTGACCTCCAAGGAGAAGCTCGGCATTGCGCGCCAGCTGGCCAAGCTCGGCGTCGACATCATTGAGGCGGGTTTCCCGGCGGCATCGAAAGACGACTTCGAGGCGGTGAAGACGATCGCCAAGGAAGTCGGGAACTTTGTGGATATAGACGGTTATGTCCCTGTGATATGTGGGCTGTCCAGGTGTAATGAGAAGGATATCAAGACGGCGTGGGAGGCGGTGAAGTATGCAAAGAGGCCGAGGATTCATACGTTCATCGCAACGAGTCCGATTCATATGGAGCATAAGCTGAGGAAGACGAAGGAGCAGGTGATTGAAATTGCGAGGAGTATGGTGAGCTATGCTAGGAGCTTGGGTTGCGAAGATGTTGAGTTTAGCCCTGAAGATGCTGGCAGATCTGAGAAGGAGTTTCTATATCAGATTTTAGGTGAAGTCATAAAGGCTGGAGCAACAACTCTGAACATTCCTGACACTGGGGCAAGTAGAGGTGCTAGGCAAGTGGAAGTAACGATCAATGGAATTGGTGAAAGGGCTGGTAATGCTTCACTAGAGGAGGTTGTCATGACTTTAAACTGCCGTGGGGAGCAAGTATTTGGGGGGCTATATACTGGAATCAATCCTAAACATATTTATATTACAAGCAAGATGGTTTCAGAGTACACTGGGATGCATGTGCAGCCACATAAGGCTATTGTTGGATCTAATGCTTTTGCACATGAAAGCGGTATCCATCAGGATGGAATGCTGAAGGACAAACGTACCTATGAAATTATATCCCCTGAAGATATTGGTTATGACCGGTCCAATGAAGCTGGCATTGTCCTCGGAAAACTTAGTGGACGCCATGCTGTGAAAAAGCAACTTGAACAGCTTGGTTATGAGCTTGATGATGTTCAACTTGAGACTGTATTCTGGCGTTTCAAAGGAGTAGCTGAACAGAAAAAGAGAGTCACTGATGCAGACCTCAGAGCATTGGTGTCAGATGAAGTTTTTCAGCCAGAAGTTGTCTGGAAGCTTCATGATCTGCAGGTTACCTGTGGAACTCTTGGTCTTTCCACAGCAACCGTTAAACTAATTGATGCTGATGGGAGAGAGCATATTGCATGTTCAGTTGGAACGGGACCAGTGGATTCAGCTTACAAGGCTGTTGATCTCATTGTGAAGGAACCAGTAACACTCGTTGAGTACTCTATGAATGGGGTCACAGAAGGAATAGATGCAATAGCCACCACTCGTGTTGTAATTCGAGTTGAAAACAGTGACATGGTCGCTGGTGAGATATCTCAACGGACGTTCAGTGGAATTGGAGCAGGAATGGACATTGTTGTTTCTAGTGTCAAGGCCTACATTGGTGCCTTGAACAAGATGCTAGGTTTCAAGGAAAGGTTTCCACAAGAGATTCCACCAGAATCAGCAGAACGAACCCCAGTGTCGGCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003852 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006551 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009098 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016053 GO:0016740 GO:0016746 GO:0019752 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046912 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00290 ko00620 ko01100 ko01110 ko01210 ko01230 map00290 map00620 map01100 map01110 map01210 map01230

Pfam Domains

Protein Families

HMGL-like LeuA_dimer

Protein Analysis

584

Amino Acids

63.74

Weight (kDa)

6.59

Isoelectric Point (pI)

43.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMGL-like	PF00682	87 - 366	1.6e-89	HMGL-like
HCS_D2	PF22617	380 - 464	1.4e-28	Homocitrate synthase post-HMGL domain-like
LeuA_dimer	PF08502	463 - 589	4.9e-26	LeuA allosteric (dimerisation) domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18500 AT1G74040 AT1G74040 AT1G74040
fragaria_vesca	FvH4_1g22410 FvH4_1g22460 FvH4_1g22570 FvH4_1g22570 FvH4_1g22570 FvH4_1g22570
malus_domestica	MD01G1019700.v1.1 MD15G1332600.v1.1
prunus_persica	Prupe.6G172500_v2.0.a1 Prupe.6G172500_v2.0.a1 Prupe.6G172500_v2.0.a1
pyrus_communis	pycom01g04920 pycom15g29280
rosa_chinensis	RchiOBHm_Chr2g0116551 RchiOBHm_Chr2g0116561
rosa_laevigata	RLG00000018287 RLG00000018288
rosa_multiflora	Rmu_sc0001287.1_g000019 Rmu_sc0004191.1_g000022 Rmu_sc0004191.1_g000030
rosa_roxburghii	Rroxscaffold_2G00127060 Rroxscaffold_2G00127070
rosa_rugosa	Rorug02G0207600
rosa_samantha	Rh2AG262500 Rh2AG262600 Rh2BG274100 Rh2BG274400 Rh2DG270700 Rh2DG270800 Rh2DG289200 Rh2DG289300
rosa_wichuraiana	Rw2G020670 Rw2G020680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	610
AasI	GACNNNNNNGTC	1 cut(s)	467
Acc36I	ACCTGC	2 cut(s)	610, 1330
AccB1I	GGYRCC	1 cut(s)	1664
AccI	GTMKAC	1 cut(s)	366
AccII	CGCG	6 cut(s)	36, 159, 177, 214, 285, 343
AclWI	GGATC	1 cut(s)	1018
AcoI	YGGCCR	1 cut(s)	351
AcuI	CTGAAG	4 cut(s)	39, 714, 1079, 1113
AcyI	GRCGYC	2 cut(s)	363, 1153
AfaI	GTAC	3 cut(s)	971, 1072, 1499
AfiI	CCNNNNNNNGG	2 cut(s)	785, 1744
AgeI	ACCGGT	1 cut(s)	1110
AgsI	TTSAA	7 cut(s)	629, 1178, 1208, 1234, 1565, 1672, 1690
AjnI	CCWGG	1 cut(s)	491
AloI	GAACNNNNNNTCC	2 cut(s)	227, 259
Alw21I	GWGCWC	1 cut(s)	17
Alw26I	GTCTC	1 cut(s)	1208
AlwI	GGATC	1 cut(s)	1018
Ama87I	CYCGRG	1 cut(s)	301
AoxI	GGCC	4 cut(s)	172, 351, 548, 1653
ApeKI	GCWGC	1 cut(s)	988
AsiGI	ACCGGT	1 cut(s)	1110
Asp700I	GAANNNNTTC	2 cut(s)	1302, 1698
AspLEI	GCGC	5 cut(s)	38, 161, 216, 343, 345
AspS9I	GGNCC	2 cut(s)	1113, 1433
AsuC2I	CCSGG	3 cut(s)	302, 303, 389
AsuHPI	GGTGA	7 cut(s)	430, 544, 634, 658, 752, 848, 1598
AvaI	CYCGRG	1 cut(s)	301
AvaII	GGWCC	2 cut(s)	1113, 1433
BaeI	ACNNNNGTAYC	2 cut(s)	1054, 1087
BalI	TGGCCA	1 cut(s)	353
BanI	GGYRCC	1 cut(s)	1664
BauI	CACGAG	1 cut(s)	1545
BbsI	GAAGAC	2 cut(s)	428, 614
Bbv12I	GWGCWC	1 cut(s)	17
BbvCI	CCTCAGC	1 cut(s)	602
BbvI	GCAGC	1 cut(s)	1000
BccI	CCATC	5 cut(s)	35, 952, 1043, 1050, 1391
BceAI	ACGGC	4 cut(s)	26, 304, 534, 873
BcgI	CGANNNNNNTGC	2 cut(s)	1117, 1151
BciT130I	CCWGG	1 cut(s)	493
BciVI	GTATCC	1 cut(s)	1049
BcnI	CCSGG	3 cut(s)	302, 303, 389
BcoDI	GTCTC	1 cut(s)	1208
BfaI	CTAG	5 cut(s)	657, 804, 860, 1644, 1682
BfmI	CTRYAG	1 cut(s)	1337
BfuAI	ACCTGC	2 cut(s)	610, 1330
BfuI	GTATCC	1 cut(s)	1049
BglII	AGATCT	1 cut(s)	707
BisI	GCNGC	7 cut(s)	39, 115, 162, 175, 217, 393, 989
BlsI	GCNGC	7 cut(s)	40, 116, 163, 176, 218, 394, 990
BmcAI	AGTACT	1 cut(s)	1499
Bme1390I	CCNGG	4 cut(s)	302, 303, 389, 493
Bme18I	GGWCC	2 cut(s)	1113, 1433
BmeT110I	CYCGRG	1 cut(s)	301
BmgT120I	GGNCC	2 cut(s)	1113, 1433
BmiI	GGNNCC	4 cut(s)	307, 1434, 1479, 1666
BmrFI	CCNGG	4 cut(s)	302, 303, 389, 493
BmrI	ACTGGG	3 cut(s)	795, 984, 1733
BmsI	GCATC	9 cut(s)	249, 273, 404, 688, 969, 1258, 1381, 1519, 1668
BmuI	ACTGGG	3 cut(s)	795, 984, 1733
BpiI	GAAGAC	2 cut(s)	428, 614
BpmI	CTGGAG	1 cut(s)	777
Bpu10I	CCTNAGC	1 cut(s)	602
BpuEI	CTTGAG	2 cut(s)	112, 1232
BpuMI	CCSGG	3 cut(s)	302, 303, 389
BsaHI	GRCGYC	2 cut(s)	363, 1153
BsaJI	CCNNGG	7 cut(s)	300, 301, 321, 432, 551, 889, 1135
BsaWI	WCCGGW	1 cut(s)	1110
BsaXI	ACNNNNNCTCC	4 cut(s)	227, 257, 652, 682
Bsc4I	CCNNNNNNNGG	2 cut(s)	785, 1744
Bse118I	RCCGGY	1 cut(s)	1110
Bse1I	ACTGG	6 cut(s)	790, 925, 979, 1436, 1481, 1739
Bse3DI	GCAATG	1 cut(s)	336
BseBI	CCWGG	1 cut(s)	493
BseDI	CCNNGG	7 cut(s)	300, 301, 321, 432, 551, 889, 1135
BseGI	GGATG	2 cut(s)	984, 1054
BseLI	CCNNNNNNNGG	2 cut(s)	785, 1744
BseMI	GCAATG	1 cut(s)	336
BseMII	CTCAG	4 cut(s)	95, 593, 702, 1291
BseNI	ACTGG	6 cut(s)	790, 925, 979, 1436, 1481, 1739
BsePI	GCGCGC	1 cut(s)	341
BseRI	GAGGAG	3 cut(s)	9, 652, 878
BseXI	GCAGC	1 cut(s)	1000
BsgI	GTGCAG	1 cut(s)	1007
Bsh1236I	CGCG	6 cut(s)	36, 159, 177, 214, 285, 343
Bsh1285I	CGRYCG	1 cut(s)	429
BshFI	GGCC	4 cut(s)	174, 353, 550, 1655
BshNI	GGYRCC	1 cut(s)	1664
BshTI	ACCGGT	1 cut(s)	1110
BsiEI	CGRYCG	1 cut(s)	429
BsiHKAI	GWGCWC	1 cut(s)	17
BsiHKCI	CYCGRG	1 cut(s)	301
BsiSI	CCGG	3 cut(s)	302, 389, 1111
BslFI	GGGAC	5 cut(s)	58, 215, 283, 455, 1446
BslI	CCNNNNNNNGG	2 cut(s)	785, 1744
BsmAI	GTCTC	1 cut(s)	1208
BsmFI	GGGAC	5 cut(s)	58, 215, 283, 455, 1446
BsmI	GAATGC	1 cut(s)	1059
BsnI	GGCC	4 cut(s)	174, 353, 550, 1655
BsoBI	CYCGRG	1 cut(s)	301
Bsp1286I	GDGCHC	1 cut(s)	17
Bsp143I	GATC	6 cut(s)	426, 707, 822, 1010, 1333, 1462
BspANI	GGCC	4 cut(s)	174, 353, 550, 1655
BspCNI	CTCAG	4 cut(s)	94, 594, 703, 1290
BspFNI	CGCG	6 cut(s)	36, 159, 177, 214, 285, 343
BspHI	TCATGA	2 cut(s)	873, 1330
BspLI	GGNNCC	4 cut(s)	307, 1434, 1479, 1666
BspMAI	CTGCAG	1 cut(s)	1341
BspMI	ACCTGC	2 cut(s)	610, 1330
BspPI	GGATC	1 cut(s)	1018
BspT107I	GGYRCC	1 cut(s)	1664
BsrDI	GCAATG	1 cut(s)	336
BsrFI	RCCGGY	1 cut(s)	1110
BsrI	ACTGG	6 cut(s)	790, 925, 979, 1436, 1481, 1739
BssAI	RCCGGY	1 cut(s)	1110
BssECI	CCNNGG	7 cut(s)	300, 301, 321, 432, 551, 889, 1135
BssHII	GCGCGC	1 cut(s)	341
BssMI	GATC	6 cut(s)	426, 707, 822, 1010, 1333, 1462
BssNI	GRCGYC	2 cut(s)	363, 1153
BssSI	CACGAG	1 cut(s)	1545
BssT1I	CCWWGG	2 cut(s)	321, 432
Bst2BI	CACGAG	1 cut(s)	1545
Bst2UI	CCWGG	1 cut(s)	493
Bst4CI	ACNGT	5 cut(s)	10, 464, 1219, 1378, 1571
BstACI	GRCGYC	2 cut(s)	363, 1153
BstC8I	GCNNGC	6 cut(s)	293, 343, 347, 351, 703, 1126
BstDEI	CTNAG	5 cut(s)	81, 602, 711, 1145, 1277
BstDSI	CCRYGG	1 cut(s)	889
BstEII	GGTNACC	1 cut(s)	1342
BstF5I	GGATG	2 cut(s)	984, 1054
BstFNI	CGCG	6 cut(s)	36, 159, 177, 214, 285, 343
BstHHI	GCGC	5 cut(s)	38, 161, 216, 343, 345
BstKTI	GATC	6 cut(s)	429, 710, 825, 1013, 1336, 1465
BstMAI	GTCTC	1 cut(s)	1208
BstMBI	GATC	6 cut(s)	426, 707, 822, 1010, 1333, 1462
BstMCI	CGRYCG	1 cut(s)	429
BstMWI	GCNNNNNNNGC	9 cut(s)	123, 183, 342, 355, 527, 669, 851, 988, 1454
BstNI	CCWGG	1 cut(s)	493
BstNSI	RCATGY	2 cut(s)	986, 1419
BstPI	GGTNACC	1 cut(s)	1342
BstSCI	CCNGG	4 cut(s)	300, 301, 387, 491
BstSFI	CTRYAG	1 cut(s)	1337
BstUI	CGCG	6 cut(s)	36, 159, 177, 214, 285, 343
BstV1I	GCAGC	1 cut(s)	1000
BstV2I	GAAGAC	2 cut(s)	428, 614
BstX2I	RGATCY	2 cut(s)	707, 1010
BstXI	CCANNNNNNTGG	1 cut(s)	1049
BstYI	RGATCY	2 cut(s)	707, 1010
BsuI	GTATCC	1 cut(s)	1049
BsuRI	GGCC	4 cut(s)	174, 353, 550, 1655
BtgI	CCRYGG	1 cut(s)	889
BtgZI	GCGATG	1 cut(s)	553
BtsCI	GGATG	2 cut(s)	984, 1054
BtsIMutI	CAGTG	7 cut(s)	783, 972, 1263, 1443, 1576, 1615, 1746
BveI	ACCTGC	2 cut(s)	610, 1330
Cac8I	GCNNGC	6 cut(s)	293, 343, 347, 351, 703, 1126
CciI	TCATGA	2 cut(s)	873, 1330
CfoI	GCGC	5 cut(s)	38, 161, 216, 343, 345
Cfr10I	RCCGGY	1 cut(s)	1110
Cfr13I	GGNCC	2 cut(s)	1113, 1433
Cfr9I	CCCGGG	1 cut(s)	301
CseI	GACGC	2 cut(s)	352, 1161
Csp6I	GTAC	3 cut(s)	970, 1071, 1498
CspAI	ACCGGT	1 cut(s)	1110
CspCI	CAANNNNNGTGG	2 cut(s)	1531, 1566
CviAII	CATG	8 cut(s)	119, 874, 983, 1028, 1157, 1331, 1416, 1576
CviQI	GTAC	3 cut(s)	970, 1071, 1498
DdeI	CTNAG	5 cut(s)	81, 602, 711, 1145, 1277
DpnI	GATC	6 cut(s)	428, 709, 824, 1012, 1335, 1464
DpnII	GATC	6 cut(s)	426, 707, 822, 1010, 1333, 1462
DraI	TTTAAA	1 cut(s)	882
DrdI	GACNNNNNNGTC	1 cut(s)	467
DseDI	GACNNNNNNGTC	1 cut(s)	467
EaeI	YGGCCR	1 cut(s)	351
Eco130I	CCWWGG	2 cut(s)	321, 432
Eco147I	AGGCCT	1 cut(s)	1655
Eco32I	GATATC	2 cut(s)	511, 1593
Eco47I	GGWCC	2 cut(s)	1113, 1433
Eco57I	CTGAAG	4 cut(s)	39, 714, 1079, 1113
Eco88I	CYCGRG	1 cut(s)	301
Eco91I	GGTNACC	1 cut(s)	1342
EcoO65I	GGTNACC	1 cut(s)	1342
EcoRII	CCWGG	1 cut(s)	491
EcoRV	GATATC	2 cut(s)	511, 1593
EcoT14I	CCWWGG	2 cut(s)	321, 432
EcoT22I	ATGCAT	1 cut(s)	984
ErhI	CCWWGG	2 cut(s)	321, 432
FaeI	CATG	8 cut(s)	122, 877, 986, 1031, 1160, 1334, 1419, 1579
FaqI	GGGAC	5 cut(s)	58, 215, 283, 455, 1446
FatI	CATG	8 cut(s)	118, 873, 982, 1027, 1156, 1330, 1415, 1575
FauI	CCCGC	2 cut(s)	164, 373
FauNDI	CATATG	1 cut(s)	588
FblI	GTMKAC	1 cut(s)	366
Fnu4HI	GCNGC	7 cut(s)	39, 115, 162, 175, 217, 393, 989
FokI	GGATG	2 cut(s)	991, 1061
Fsp4HI	GCNGC	7 cut(s)	39, 115, 162, 175, 217, 393, 989
FspBI	CTAG	5 cut(s)	657, 804, 860, 1644, 1682
GlaI	GCGC	5 cut(s)	37, 160, 215, 342, 344
GluI	GCNGC	7 cut(s)	39, 115, 162, 175, 217, 393, 989
GsuI	CTGGAG	1 cut(s)	777
HaeIII	GGCC	4 cut(s)	174, 353, 550, 1655
HapII	CCGG	3 cut(s)	302, 389, 1111
HgaI	GACGC	2 cut(s)	352, 1161
HhaI	GCGC	5 cut(s)	38, 161, 216, 343, 345
Hin1I	GRCGYC	2 cut(s)	363, 1153
Hin1II	CATG	8 cut(s)	122, 877, 986, 1031, 1160, 1334, 1419, 1579
Hin6I	GCGC	5 cut(s)	36, 159, 214, 341, 343
HinP1I	GCGC	5 cut(s)	36, 159, 214, 341, 343
HincII	GTYRAC	1 cut(s)	367
HindII	GTYRAC	1 cut(s)	367
HindIII	AAGCTT	1 cut(s)	1325
HinfI	GANTC	8 cut(s)	556, 577, 583, 924, 1260, 1442, 1711, 1721
HpaII	CCGG	3 cut(s)	302, 389, 1111
HphI	GGTGA	7 cut(s)	430, 544, 634, 658, 752, 848, 1598
Hpy166II	GTNNAC	4 cut(s)	98, 367, 972, 1151
Hpy188I	TCNGA	9 cut(s)	247, 582, 712, 732, 771, 967, 1139, 1280, 1294
Hpy188III	TCNNGA	9 cut(s)	106, 232, 442, 514, 779, 874, 1046, 1321, 1331
Hpy8I	GTNNAC	4 cut(s)	98, 367, 972, 1151
Hpy99I	CGWCG	2 cut(s)	290, 368
HpyAV	CCTTC	6 cut(s)	499, 607, 709, 1054, 1468, 1514
HpyCH4III	ACNGT	5 cut(s)	10, 464, 1219, 1378, 1571
HpyCH4IV	ACGT	5 cut(s)	228, 258, 563, 1069, 1604
HpyCH4V	TGCA	8 cut(s)	542, 982, 988, 1025, 1271, 1339, 1415, 1532
HpyF10VI	GCNNNNNNNGC	9 cut(s)	123, 183, 342, 355, 527, 669, 851, 988, 1454
HpyF3I	CTNAG	5 cut(s)	81, 602, 711, 1145, 1277
HpySE526I	ACGT	5 cut(s)	228, 258, 563, 1069, 1604
Hsp92I	GRCGYC	2 cut(s)	363, 1153
Hsp92II	CATG	8 cut(s)	122, 877, 986, 1031, 1160, 1334, 1419, 1579
HspAI	GCGC	5 cut(s)	36, 159, 214, 341, 343
Kzo9I	GATC	6 cut(s)	426, 707, 822, 1010, 1333, 1462
Lsp1109I	GCAGC	1 cut(s)	1000
LweI	GCATC	9 cut(s)	249, 273, 404, 688, 969, 1258, 1381, 1519, 1668
MaeI	CTAG	5 cut(s)	657, 804, 860, 1644, 1682
MaeII	ACGT	5 cut(s)	228, 258, 563, 1069, 1604
MaeIII	GTNAC	6 cut(s)	817, 1261, 1342, 1483, 1513, 1571
MalI	GATC	6 cut(s)	428, 709, 824, 1012, 1335, 1464
MboI	GATC	6 cut(s)	426, 707, 822, 1010, 1333, 1462
MboII	GAAGA	9 cut(s)	39, 42, 45, 259, 433, 619, 686, 707, 1106
MflI	RGATCY	2 cut(s)	707, 1010
MhlI	GDGCHC	1 cut(s)	17
MlsI	TGGCCA	1 cut(s)	353
MluCI	AATT	6 cut(s)	630, 831, 1080, 1386, 1554, 1614
MluNI	TGGCCA	1 cut(s)	353
MlyI	GAGTC	2 cut(s)	586, 1269
MmeI	TCCRAC	3 cut(s)	270, 988, 1405
Mox20I	TGGCCA	1 cut(s)	353
Mph1103I	ATGCAT	1 cut(s)	984
MroXI	GAANNNNTTC	2 cut(s)	1302, 1698
MscI	TGGCCA	1 cut(s)	353
MseI	TTAA	2 cut(s)	881, 1380
MslI	CAYNNNNRTG	2 cut(s)	977, 1047
Msp20I	TGGCCA	1 cut(s)	353
MspA1I	CMGCKG	1 cut(s)	349
MspI	CCGG	3 cut(s)	302, 389, 1111
MspR9I	CCNGG	4 cut(s)	302, 303, 389, 493
Mva1269I	GAATGC	1 cut(s)	1059
MvaI	CCWGG	1 cut(s)	493
MvnI	CGCG	6 cut(s)	36, 159, 177, 214, 285, 343
MwoI	GCNNNNNNNGC	9 cut(s)	123, 183, 342, 355, 527, 669, 851, 988, 1454
NciI	CCSGG	3 cut(s)	302, 303, 389
NdeI	CATATG	1 cut(s)	588
NdeII	GATC	6 cut(s)	426, 707, 822, 1010, 1333, 1462
NlaIII	CATG	8 cut(s)	122, 877, 986, 1031, 1160, 1334, 1419, 1579
NlaIV	GGNNCC	4 cut(s)	307, 1434, 1479, 1666
NmeAIII	GCCGAG	3 cut(s)	312, 339, 576
NmuCI	GTSAC	3 cut(s)	1261, 1513, 1571
NsiI	ATGCAT	1 cut(s)	984
NspI	RCATGY	2 cut(s)	986, 1419
PagI	TCATGA	2 cut(s)	873, 1330
PaqCI	CACCTGC	1 cut(s)	610
PauI	GCGCGC	1 cut(s)	341
PceI	AGGCCT	1 cut(s)	1655
PctI	GAATGC	1 cut(s)	1059
PdmI	GAANNNNTTC	2 cut(s)	1302, 1698
PfeI	GAWTC	6 cut(s)	556, 583, 924, 1442, 1711, 1721
PflFI	GACNNNGTC	2 cut(s)	227, 1577
PinAI	ACCGGT	1 cut(s)	1110
PkrI	GCNGC	7 cut(s)	40, 116, 163, 176, 218, 394, 990
Ple19I	CGATCG	1 cut(s)	429
PleI	GAGTC	2 cut(s)	585, 1268
PpsI	GAGTC	2 cut(s)	585, 1268
Psp6I	CCWGG	1 cut(s)	491
PspEI	GGTNACC	1 cut(s)	1342
PspGI	CCWGG	1 cut(s)	491
PspN4I	GGNNCC	4 cut(s)	307, 1434, 1479, 1666
PspPI	GGNCC	2 cut(s)	1113, 1433
PstI	CTGCAG	1 cut(s)	1341
PsuI	RGATCY	2 cut(s)	707, 1010
PsyI	GACNNNGTC	2 cut(s)	227, 1577
PteI	GCGCGC	1 cut(s)	341
PvuI	CGATCG	1 cut(s)	429
PvuII	CAGCTG	1 cut(s)	349
RsaI	GTAC	3 cut(s)	971, 1072, 1499
RsaNI	GTAC	3 cut(s)	970, 1071, 1498
RseI	CAYNNNNRTG	2 cut(s)	977, 1047
SalI	GTCGAC	1 cut(s)	365
SaqAI	TTAA	2 cut(s)	881, 1380
SatI	GCNGC	7 cut(s)	39, 115, 162, 175, 217, 393, 989
Sau3AI	GATC	6 cut(s)	426, 707, 822, 1010, 1333, 1462
Sau96I	GGNCC	2 cut(s)	1113, 1433
ScaI	AGTACT	1 cut(s)	1499
SchI	GAGTC	2 cut(s)	586, 1269
ScrFI	CCNGG	4 cut(s)	302, 303, 389, 493
SduI	GDGCHC	1 cut(s)	17
SfaNI	GCATC	9 cut(s)	249, 273, 404, 688, 969, 1258, 1381, 1519, 1668
SfcI	CTRYAG	1 cut(s)	1337
SinI	GGWCC	2 cut(s)	1113, 1433
SmaI	CCCGGG	1 cut(s)	303
SmiMI	CAYNNNNRTG	2 cut(s)	977, 1047
SmlI	CTYRAG	2 cut(s)	127, 1211
SmoI	CTYRAG	2 cut(s)	127, 1211
Sse9I	AATT	6 cut(s)	630, 831, 1080, 1386, 1554, 1614
SseBI	AGGCCT	1 cut(s)	1655
SspMI	CTAG	5 cut(s)	657, 804, 860, 1644, 1682
StuI	AGGCCT	1 cut(s)	1655
StyD4I	CCNGG	4 cut(s)	300, 301, 387, 491
StyI	CCWWGG	2 cut(s)	321, 432
TaaI	ACNGT	5 cut(s)	10, 464, 1219, 1378, 1571
TaiI	ACGT	5 cut(s)	231, 261, 566, 1072, 1607
TaqI	TCGA	5 cut(s)	270, 366, 398, 411, 1558
TasI	AATT	6 cut(s)	630, 831, 1080, 1386, 1554, 1614
TatI	WGTACW	2 cut(s)	969, 1497
TauI	GCSGC	6 cut(s)	41, 117, 164, 177, 219, 395
TfiI	GAWTC	6 cut(s)	556, 583, 924, 1442, 1711, 1721
Tru1I	TTAA	2 cut(s)	881, 1380
Tru9I	TTAA	2 cut(s)	881, 1380
TscAI	CASTG	7 cut(s)	790, 979, 1270, 1443, 1576, 1615, 1746
TseFI	GTSAC	3 cut(s)	1261, 1513, 1571
TseI	GCWGC	1 cut(s)	988
Tsp45I	GTSAC	3 cut(s)	1261, 1513, 1571
TspDTI	ATGAA	9 cut(s)	548, 556, 575, 1044, 1092, 1134, 1311, 1319, 1520
TspGWI	ACGGA	3 cut(s)	60, 83, 1615
TspMI	CCCGGG	1 cut(s)	301
TspRI	CASTG	7 cut(s)	790, 979, 1270, 1443, 1576, 1615, 1746
Tth111I	GACNNNGTC	2 cut(s)	227, 1577
VpaK11BI	GGWCC	2 cut(s)	1113, 1433
XceI	RCATGY	2 cut(s)	986, 1419
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1317
XmaI	CCCGGG	1 cut(s)	301
XmiI	GTMKAC	1 cut(s)	366
XmnI	GAANNNNTTC	2 cut(s)	1302, 1698
XspI	CTAG	5 cut(s)	657, 804, 860, 1644, 1682
ZrmI	AGTACT	1 cut(s)	1499
Zsp2I	ATGCAT	1 cut(s)	984

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.