Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0003124

Physical Location & Seq

Genomic Coordinates Forward (+)

19469031 .. 19474006

Gene Structure 4976 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0207600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1809 bp

ATGGGGAAAAGACTCCATGTTCAAGTTATTGCTGAGGTGGATATTTACAAGTCGGCTCCTTGGGATCTTCCGGACAAATCTTGTTGGAGAAGTGGAGATTTGAAATGGTACTTCTTTTCTCCTACAGAGAAAAAATATGCACGCGGAGCTAGAATGAATCGTGCCACCGACTGTGGGTACTGGAAGACCTCGGGAAAGGATAGGTCTGTTGTTTACGATAGTGAAGTTGTCGGGTGGATAAAAACATTAATTTTTCACACAGGTCGAGCTCCACGAGGAGAACGGACTAATTGGGTTTTACATGAGTATAGGCTTGAAGACAAGAACCTGGTTGATATGGGTGTGCCTCAGGATTCTTATGTGCTCTGTATGGTTTTCCAAAAGGATGGGATCGGACCGAGAAGTAATAAACAATATGGTGCACCCTTCAAAGAGGAAGACTGGACTGATGATGAGGTTGAAACTGATGTAGTTCCATATGTAAACATGACTGAGCCAAACCTTGTTCATGCAAACATGCATGAGCCAGAGCCAGACCCTGATCAAGTACTTGTTAATTCAAACATCACTGAGCCCGATCTTGTTTATGGAAATGTGCCCGACCCATACCTTGTTTATCCAAACATGCCTCAATCAGACCTTGGTTGTGCAAACATGCCTGAGCCATACCTGGTCTTGCCCAGCAACTATAATAGTTCTATTGCTACTCGAACCAATTCCCATGAGTCTTGCGTTTCTGATATCTTGCCACCTTCAAGCAATGTTCTCCAGTCTGTTTCCAGTAATTATGCTACAACAGAGAAACCTCATGTTTCAACCGATGATGATATCATGTCGATGCTTAATTGCTTTACAGAAGAAGGAACTTTCTCCATGGGTGACATTGACAAAAATGAGGAGCTTGATAATTTCATTTATTCGGGAGGTGCTAATCCTATAGCTGATCTTGAAATATGTGATACTTATGAAGATCTGGGAGGTATTAGCAAAGATGGATATAATATCCCCAATGGAGCTAATTCTGGAGCTCCAGCTATTGATTTTGAATTGAATGAAACTGTTGATTTTCAATCTGCTGCTGTTCTTTTAATTGTGTATTTTGATCATGAAATACATATGTATGCAAACTATAGAATTAAGATGTCGAATTCTGAATTAGAGGACAAAATTTTCAGCTTGTTCAAGGATTTTATGGCCAGGATTGCCAAGTTTGAGGAATTGGTGCCCATGGGAAGCACATTTCTCAATGGCTTTCAGCATGCACTGGAGTTTCTTCGACGGCCGGCGATAGATAAAACATCTGAGTTGGTTAAAAATATAATCCAATCTAACGAAACAAAGAGGGTTAAATCATACATTGAAGCTGGATGTATCAACATTGATGATGGCAGGCACAATATAACCAAGTTGCAATCATGCCAACTTGGACTTCATGACCATATATGTAAAGGAAAAGGTATACTTAACGAACTGGAATGCCTACTGGAAGATGTAAGTGGTGCAATGCAAGATAAATCCTTGTTCCAGGATGACAATTTGGGTGAAAGGTTGAATGAACAAGCATGTATCAATGACAAGGAGGAAATTGCCTTGCCTTGTCCCAGAAGAAATGAAGTTACTGATTATGCTGTCCTGATGGCAGTCATTTATCGTATGGTCAAGCAAGAATATATGATGCAGGAAAGAATTGTTTCTGCCTTAAGTCTCAAGTCATCTTCCGGAGAATTAGAGAGCTACTGCCTTATGTGGTCTTTGCGTCCTTACATAGATGAAGAAATTATGGGTCATGCTTGGAAACTTATACACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003852 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006551 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009098 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016053 GO:0016740 GO:0016746 GO:0019752 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046912 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00290 ko00620 ko01100 ko01110 ko01210 ko01230 map00290 map00620 map01100 map01110 map01210 map01230

Pfam Domains

Protein Families

HMGL-like LeuA_dimer

Protein Analysis

602

Amino Acids

68.32

Weight (kDa)

4.73

Isoelectric Point (pI)

52.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	2 - 105	3.2e-30	No apical meristem (NAM) protein
DUF7795	PF25071	384 - 504	1.2e-54	Domain of unknown function (DUF7795)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18500 AT1G74040 AT1G74040 AT1G74040
fragaria_vesca	FvH4_1g22410 FvH4_1g22460 FvH4_1g22570 FvH4_1g22570 FvH4_1g22570 FvH4_1g22570
malus_domestica	MD01G1019700.v1.1 MD15G1332600.v1.1
prunus_persica	Prupe.6G172500_v2.0.a1 Prupe.6G172500_v2.0.a1 Prupe.6G172500_v2.0.a1
pyrus_communis	pycom01g04920 pycom15g29280
rosa_chinensis	RchiOBHm_Chr2g0116551 RchiOBHm_Chr2g0116561
rosa_laevigata	RLG00000018287 RLG00000018288
rosa_multiflora	Rmu_sc0001287.1_g000019 Rmu_sc0004191.1_g000022 Rmu_sc0004191.1_g000030
rosa_roxburghii	Rroxscaffold_2G00127060 Rroxscaffold_2G00127070
rosa_rugosa	Rorug02G0207600
rosa_samantha	Rh2AG262500 Rh2AG262600 Rh2BG274100 Rh2BG274400 Rh2DG270700 Rh2DG270800 Rh2DG289200 Rh2DG289300
rosa_wichuraiana	Rw2G020670 Rw2G020680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1222
AccI	GTMKAC	1 cut(s)	1459
AccII	CGCG	1 cut(s)	144
AccIII	TCCGGA	2 cut(s)	70, 1718
AciI	CCGC	1 cut(s)	144
AclWI	GGATC	2 cut(s)	72, 398
AcoI	YGGCCR	2 cut(s)	1194, 1280
AcsI	RAATTY	2 cut(s)	1147, 1167
AfaI	GTAC	3 cut(s)	110, 179, 549
AfiI	CCNNNNNNNGG	1 cut(s)	174
AflII	CTTAAG	1 cut(s)	1699
AjnI	CCWGG	4 cut(s)	327, 669, 1196, 1524
AjuI	GAANNNNNNNTTGG	2 cut(s)	1413, 1445
Alw21I	GWGCWC	4 cut(s)	271, 366, 424, 1030
Alw26I	GTCTC	1 cut(s)	1709
Alw44I	GTGCAC	1 cut(s)	420
AlwI	GGATC	2 cut(s)	72, 398
AlwNI	CAGNNNCTG	1 cut(s)	539
Ama87I	CYCGRG	1 cut(s)	190
Aor13HI	TCCGGA	2 cut(s)	70, 1718
AoxI	GGCC	2 cut(s)	1194, 1280
ApaLI	GTGCAC	1 cut(s)	420
ApeKI	GCWGC	1 cut(s)	1076
ApoI	RAATTY	2 cut(s)	1147, 1167
AseI	ATTAAT	1 cut(s)	248
Asp700I	GAANNNNTTC	2 cut(s)	715, 1690
AspS9I	GGNCC	1 cut(s)	395
AsuHPI	GGTGA	2 cut(s)	890, 1553
AvaI	CYCGRG	1 cut(s)	190
AvaII	GGWCC	1 cut(s)	395
AxyI	CCTNAGG	1 cut(s)	348
BaeGI	GKGCMC	3 cut(s)	424, 600, 1227
BalI	TGGCCA	1 cut(s)	1196
BanI	GGYRCC	1 cut(s)	1222
BanII	GRGCYC	3 cut(s)	271, 576, 1030
BauI	CACGAG	1 cut(s)	273
BbsI	GAAGAC	3 cut(s)	191, 324, 444
Bbv12I	GWGCWC	4 cut(s)	271, 366, 424, 1030
BbvCI	CCTCAGC	1 cut(s)	33
BbvI	GCAGC	1 cut(s)	1063
BccI	CCATC	4 cut(s)	380, 986, 1379, 1630
BceAI	ACGGC	1 cut(s)	1295
BciT130I	CCWGG	4 cut(s)	329, 671, 1198, 1526
BclI	TGATCA	2 cut(s)	541, 1102
BcoDI	GTCTC	1 cut(s)	1709
BfaI	CTAG	1 cut(s)	150
BfmI	CTRYAG	3 cut(s)	123, 936, 1129
BfrI	CTTAAG	1 cut(s)	1699
BglII	AGATCT	1 cut(s)	970
BisI	GCNGC	1 cut(s)	1077
BlsI	GCNGC	1 cut(s)	1078
BmcAI	AGTACT	1 cut(s)	549
Bme1390I	CCNGG	4 cut(s)	329, 671, 1198, 1526
Bme18I	GGWCC	1 cut(s)	395
BmeT110I	CYCGRG	1 cut(s)	190
BmgT120I	GGNCC	1 cut(s)	395
BmiI	GGNNCC	2 cut(s)	57, 1224
BmrFI	CCNGG	4 cut(s)	329, 671, 1198, 1526
BmsI	GCATC	2 cut(s)	828, 1665
BpiI	GAAGAC	3 cut(s)	191, 324, 444
BpmI	CTGGAG	4 cut(s)	752, 1014, 1044, 1286
Bpu10I	CCTNAGC	2 cut(s)	33, 660
BpuEI	CTTGAG	1 cut(s)	1691
BsaJI	CCNNGG	5 cut(s)	59, 189, 640, 873, 1227
BsaWI	WCCGGW	2 cut(s)	70, 1718
Bsc4I	CCNNNNNNNGG	1 cut(s)	174
Bse118I	RCCGGY	1 cut(s)	1282
Bse1I	ACTGG	7 cut(s)	185, 446, 769, 780, 1269, 1476, 1488
Bse21I	CCTNAGG	1 cut(s)	348
Bse3DI	GCAATG	2 cut(s)	766, 1509
BseAI	TCCGGA	2 cut(s)	70, 1718
BseBI	CCWGG	4 cut(s)	329, 671, 1198, 1526
BseDI	CCNNGG	5 cut(s)	59, 189, 640, 873, 1227
BseGI	GGATG	3 cut(s)	391, 1373, 1534
BseLI	CCNNNNNNNGG	1 cut(s)	174
BseMI	GCAATG	2 cut(s)	766, 1509
BseMII	CTCAG	6 cut(s)	24, 362, 483, 561, 651, 1293
BseNI	ACTGG	7 cut(s)	185, 446, 769, 780, 1269, 1476, 1488
BseRI	GAGGAG	2 cut(s)	291, 911
BseSI	GKGCMC	3 cut(s)	424, 600, 1227
BseX3I	CGGCCG	1 cut(s)	1280
BseXI	GCAGC	1 cut(s)	1063
BseYI	CCCAGC	1 cut(s)	680
Bsh1236I	CGCG	1 cut(s)	144
Bsh1285I	CGRYCG	1 cut(s)	1283
BshFI	GGCC	2 cut(s)	1196, 1282
BshNI	GGYRCC	1 cut(s)	1222
BsiEI	CGRYCG	1 cut(s)	1283
BsiHKAI	GWGCWC	4 cut(s)	271, 366, 424, 1030
BsiHKCI	CYCGRG	1 cut(s)	190
BsiSI	CCGG	3 cut(s)	71, 1283, 1719
BslFI	GGGAC	1 cut(s)	1584
BslI	CCNNNNNNNGG	1 cut(s)	174
BsmAI	GTCTC	1 cut(s)	1709
BsmFI	GGGAC	1 cut(s)	1584
BsmI	GAATGC	1 cut(s)	1481
BsnI	GGCC	2 cut(s)	1196, 1282
BsoBI	CYCGRG	1 cut(s)	190
Bsp1286I	GDGCHC	7 cut(s)	271, 366, 424, 576, 600, 1030, 1227
Bsp13I	TCCGGA	2 cut(s)	70, 1718
Bsp143I	GATC	7 cut(s)	64, 390, 541, 577, 943, 970, 1102
Bsp19I	CCATGG	2 cut(s)	873, 1227
BspACI	CCGC	1 cut(s)	144
BspANI	GGCC	2 cut(s)	1196, 1282
BspCNI	CTCAG	6 cut(s)	25, 361, 484, 562, 652, 1294
BspEI	TCCGGA	2 cut(s)	70, 1718
BspFNI	CGCG	1 cut(s)	144
BspHI	TCATGA	2 cut(s)	1105, 1432
BspLI	GGNNCC	2 cut(s)	57, 1224
BspPI	GGATC	2 cut(s)	72, 398
BspT107I	GGYRCC	1 cut(s)	1222
BspTI	CTTAAG	1 cut(s)	1699
BsrDI	GCAATG	2 cut(s)	766, 1509
BsrFI	RCCGGY	1 cut(s)	1282
BsrI	ACTGG	7 cut(s)	185, 446, 769, 780, 1269, 1476, 1488
BssAI	RCCGGY	1 cut(s)	1282
BssECI	CCNNGG	5 cut(s)	59, 189, 640, 873, 1227
BssMI	GATC	7 cut(s)	64, 390, 541, 577, 943, 970, 1102
BssNAI	GTATAC	1 cut(s)	1460
BssSI	CACGAG	1 cut(s)	273
BssT1I	CCWWGG	4 cut(s)	59, 640, 873, 1227
Bst1107I	GTATAC	1 cut(s)	1460
Bst2BI	CACGAG	1 cut(s)	273
Bst2UI	CCWGG	4 cut(s)	329, 671, 1198, 1526
Bst4CI	ACNGT	2 cut(s)	173, 1060
BstAFI	CTTAAG	1 cut(s)	1699
BstC8I	GCNNGC	4 cut(s)	142, 1260, 1284, 1391
BstDEI	CTNAG	6 cut(s)	33, 348, 492, 570, 660, 1302
BstDSI	CCRYGG	2 cut(s)	873, 1227
BstF5I	GGATG	3 cut(s)	391, 1373, 1534
BstFNI	CGCG	1 cut(s)	144
BstKTI	GATC	7 cut(s)	67, 393, 544, 580, 946, 973, 1105
BstMAI	GTCTC	1 cut(s)	1709
BstMBI	GATC	7 cut(s)	64, 390, 541, 577, 943, 970, 1102
BstMCI	CGRYCG	1 cut(s)	1283
BstMWI	GCNNNNNNNGC	2 cut(s)	146, 1202
BstNI	CCWGG	4 cut(s)	329, 671, 1198, 1526
BstNSI	RCATGY	5 cut(s)	520, 628, 658, 1262, 1566
BstSCI	CCNGG	4 cut(s)	327, 669, 1196, 1524
BstSFI	CTRYAG	3 cut(s)	123, 936, 1129
BstSLI	GKGCMC	3 cut(s)	424, 600, 1227
BstUI	CGCG	1 cut(s)	144
BstV1I	GCAGC	1 cut(s)	1063
BstV2I	GAAGAC	3 cut(s)	191, 324, 444
BstX2I	RGATCY	2 cut(s)	64, 970
BstXI	CCANNNNNNTGG	1 cut(s)	386
BstYI	RGATCY	2 cut(s)	64, 970
BstZ17I	GTATAC	1 cut(s)	1460
BstZI	CGGCCG	1 cut(s)	1280
Bsu36I	CCTNAGG	1 cut(s)	348
BsuRI	GGCC	2 cut(s)	1196, 1282
BtgI	CCRYGG	2 cut(s)	873, 1227
BtsCI	GGATG	3 cut(s)	391, 1373, 1534
BtsIMutI	CAGTG	3 cut(s)	567, 1262, 1804
Cac8I	GCNNGC	4 cut(s)	142, 1260, 1284, 1391
CaiI	CAGNNNCTG	1 cut(s)	539
CciI	TCATGA	2 cut(s)	1105, 1432
Cfr10I	RCCGGY	1 cut(s)	1282
Cfr13I	GGNCC	1 cut(s)	395
CpoI	CGGWCCG	1 cut(s)	395
CseI	GACGC	1 cut(s)	1745
CsiI	ACCWGGT	2 cut(s)	327, 669
Csp6I	GTAC	3 cut(s)	109, 178, 548
CspI	CGGWCCG	1 cut(s)	395
CviQI	GTAC	3 cut(s)	109, 178, 548
DdeI	CTNAG	6 cut(s)	33, 348, 492, 570, 660, 1302
DpnI	GATC	7 cut(s)	66, 392, 543, 579, 945, 972, 1104
DpnII	GATC	7 cut(s)	64, 390, 541, 577, 943, 970, 1102
EaeI	YGGCCR	2 cut(s)	1194, 1280
EagI	CGGCCG	1 cut(s)	1280
Ecl136II	GAGCTC	2 cut(s)	269, 1028
EclXI	CGGCCG	1 cut(s)	1280
Eco130I	CCWWGG	4 cut(s)	59, 640, 873, 1227
Eco24I	GRGCYC	3 cut(s)	271, 576, 1030
Eco32I	GATATC	2 cut(s)	742, 829
Eco47I	GGWCC	1 cut(s)	395
Eco52I	CGGCCG	1 cut(s)	1280
Eco53kI	GAGCTC	2 cut(s)	269, 1028
Eco81I	CCTNAGG	1 cut(s)	348
Eco88I	CYCGRG	1 cut(s)	190
EcoICRI	GAGCTC	2 cut(s)	269, 1028
EcoRI	GAATTC	1 cut(s)	1147
EcoRII	CCWGG	4 cut(s)	327, 669, 1196, 1524
EcoRV	GATATC	2 cut(s)	742, 829
EcoT14I	CCWWGG	4 cut(s)	59, 640, 873, 1227
EcoT22I	ATGCAT	1 cut(s)	522
EcoT38I	GRGCYC	3 cut(s)	271, 576, 1030
ErhI	CCWWGG	4 cut(s)	59, 640, 873, 1227
FalI	AAGNNNNNCTT	2 cut(s)	1446, 1478
FaqI	GGGAC	1 cut(s)	1584
FauNDI	CATATG	2 cut(s)	478, 1116
FbaI	TGATCA	2 cut(s)	541, 1102
FblI	GTMKAC	1 cut(s)	1459
Fnu4HI	GCNGC	1 cut(s)	1077
FokI	GGATG	3 cut(s)	398, 1380, 1541
FriOI	GRGCYC	3 cut(s)	271, 576, 1030
Fsp4HI	GCNGC	1 cut(s)	1077
FspBI	CTAG	1 cut(s)	150
GluI	GCNGC	1 cut(s)	1077
GsaI	CCCAGC	1 cut(s)	684
GsuI	CTGGAG	4 cut(s)	752, 1014, 1044, 1286
HaeIII	GGCC	2 cut(s)	1196, 1282
HapII	CCGG	3 cut(s)	71, 1283, 1719
HgaI	GACGC	1 cut(s)	1745
HinfI	GANTC	4 cut(s)	12, 157, 353, 725
HpaII	CCGG	3 cut(s)	71, 1283, 1719
HphI	GGTGA	2 cut(s)	890, 1553
Hpy166II	GTNNAC	4 cut(s)	214, 422, 484, 1460
Hpy188I	TCNGA	5 cut(s)	395, 637, 739, 1153, 1303
Hpy8I	GTNNAC	4 cut(s)	214, 422, 484, 1460
Hpy99I	CGWCG	1 cut(s)	1281
HpyAV	CCTTC	3 cut(s)	436, 762, 854
HpyCH4III	ACNGT	2 cut(s)	173, 1060
HpyF10VI	GCNNNNNNNGC	2 cut(s)	146, 1202
HpyF3I	CTNAG	6 cut(s)	33, 348, 492, 570, 660, 1302
Kpn2I	TCCGGA	2 cut(s)	70, 1718
KroI	GCCGGC	1 cut(s)	1282
KroNI	GCCGGC	1 cut(s)	1284
Ksp22I	TGATCA	2 cut(s)	541, 1102
Kzo9I	GATC	7 cut(s)	64, 390, 541, 577, 943, 970, 1102
LmnI	GCTCC	7 cut(s)	61, 146, 274, 898, 1013, 1025, 1033
Lsp1109I	GCAGC	1 cut(s)	1063
LweI	GCATC	2 cut(s)	828, 1665
MabI	ACCWGGT	2 cut(s)	327, 669
MaeI	CTAG	1 cut(s)	150
MaeIII	GTNAC	2 cut(s)	878, 1615
MalI	GATC	7 cut(s)	66, 392, 543, 579, 945, 972, 1104
MboI	GATC	7 cut(s)	64, 390, 541, 577, 943, 970, 1102
MflI	RGATCY	2 cut(s)	64, 970
MhlI	GDGCHC	7 cut(s)	271, 366, 424, 576, 600, 1030, 1227
MlsI	TGGCCA	1 cut(s)	1196
MluNI	TGGCCA	1 cut(s)	1196
MlyI	GAGTC	2 cut(s)	6, 734
MmeI	TCCRAC	1 cut(s)	65
Mox20I	TGGCCA	1 cut(s)	1196
Mph1103I	ATGCAT	1 cut(s)	522
MroI	TCCGGA	2 cut(s)	70, 1718
MroNI	GCCGGC	1 cut(s)	1282
MroXI	GAANNNNTTC	2 cut(s)	715, 1690
MscI	TGGCCA	1 cut(s)	1196
MseI	TTAA	9 cut(s)	248, 555, 843, 1088, 1137, 1311, 1347, 1464, 1700
MslI	CAYNNNNRTG	2 cut(s)	836, 1119
Msp20I	TGGCCA	1 cut(s)	1196
MspCI	CTTAAG	1 cut(s)	1699
MspI	CCGG	3 cut(s)	71, 1283, 1719
MspR9I	CCNGG	4 cut(s)	329, 671, 1198, 1526
Mva1269I	GAATGC	1 cut(s)	1481
MvaI	CCWGG	4 cut(s)	329, 671, 1198, 1526
MvnI	CGCG	1 cut(s)	144
MwoI	GCNNNNNNNGC	2 cut(s)	146, 1202
NaeI	GCCGGC	1 cut(s)	1284
NcoI	CCATGG	2 cut(s)	873, 1227
NdeI	CATATG	2 cut(s)	478, 1116
NdeII	GATC	7 cut(s)	64, 390, 541, 577, 943, 970, 1102
NgoMIV	GCCGGC	1 cut(s)	1282
NlaIV	GGNNCC	2 cut(s)	57, 1224
NmuCI	GTSAC	1 cut(s)	878
NsiI	ATGCAT	1 cut(s)	522
NspI	RCATGY	5 cut(s)	520, 628, 658, 1262, 1566
PaeI	GCATGC	1 cut(s)	1262
PagI	TCATGA	2 cut(s)	1105, 1432
PcsI	WCGNNNNNNNCGW	1 cut(s)	271
PctI	GAATGC	1 cut(s)	1481
PdiI	GCCGGC	1 cut(s)	1284
PdmI	GAANNNNTTC	2 cut(s)	715, 1690
PfeI	GAWTC	2 cut(s)	157, 353
PfoI	TCCNGGA	1 cut(s)	1524
PkrI	GCNGC	1 cut(s)	1078
PleI	GAGTC	2 cut(s)	6, 733
PpsI	GAGTC	2 cut(s)	6, 733
PshBI	ATTAAT	1 cut(s)	248
Psp124BI	GAGCTC	2 cut(s)	271, 1030
Psp6I	CCWGG	4 cut(s)	327, 669, 1196, 1524
PspFI	CCCAGC	1 cut(s)	680
PspGI	CCWGG	4 cut(s)	327, 669, 1196, 1524
PspN4I	GGNNCC	2 cut(s)	57, 1224
PspPI	GGNCC	1 cut(s)	395
PstNI	CAGNNNCTG	1 cut(s)	539
PsuI	RGATCY	2 cut(s)	64, 970
RsaI	GTAC	3 cut(s)	110, 179, 549
RsaNI	GTAC	3 cut(s)	109, 178, 548
RseI	CAYNNNNRTG	2 cut(s)	836, 1119
Rsr2I	CGGWCCG	1 cut(s)	395
RsrII	CGGWCCG	1 cut(s)	395
SacI	GAGCTC	2 cut(s)	271, 1030
SaqAI	TTAA	9 cut(s)	248, 555, 843, 1088, 1137, 1311, 1347, 1464, 1700
SatI	GCNGC	1 cut(s)	1077
Sau3AI	GATC	7 cut(s)	64, 390, 541, 577, 943, 970, 1102
Sau96I	GGNCC	1 cut(s)	395
ScaI	AGTACT	1 cut(s)	549
SchI	GAGTC	2 cut(s)	6, 734
ScrFI	CCNGG	4 cut(s)	329, 671, 1198, 1526
SduI	GDGCHC	7 cut(s)	271, 366, 424, 576, 600, 1030, 1227
SexAI	ACCWGGT	2 cut(s)	327, 669
SfaNI	GCATC	2 cut(s)	828, 1665
SfcI	CTRYAG	3 cut(s)	123, 936, 1129
SinI	GGWCC	1 cut(s)	395
SmiMI	CAYNNNNRTG	2 cut(s)	836, 1119
SmlI	CTYRAG	2 cut(s)	1699, 1706
SmoI	CTYRAG	2 cut(s)	1699, 1706
SphI	GCATGC	1 cut(s)	1262
SsiI	CCGC	1 cut(s)	144
SspMI	CTAG	1 cut(s)	150
SstI	GAGCTC	2 cut(s)	271, 1030
StyD4I	CCNGG	4 cut(s)	327, 669, 1196, 1524
StyI	CCWWGG	4 cut(s)	59, 640, 873, 1227
TaaI	ACNGT	2 cut(s)	173, 1060
TaqI	TCGA	5 cut(s)	265, 709, 836, 1145, 1276
TaqII	GACCGA	1 cut(s)	412
TatI	WGTACW	1 cut(s)	547
TfiI	GAWTC	2 cut(s)	157, 353
Tru1I	TTAA	9 cut(s)	248, 555, 843, 1088, 1137, 1311, 1347, 1464, 1700
Tru9I	TTAA	9 cut(s)	248, 555, 843, 1088, 1137, 1311, 1347, 1464, 1700
TscAI	CASTG	2 cut(s)	574, 1269
TseFI	GTSAC	1 cut(s)	878
TseI	GCWGC	1 cut(s)	1076
Tsp45I	GTSAC	1 cut(s)	878
TspGWI	ACGGA	1 cut(s)	298
TspRI	CASTG	2 cut(s)	574, 1269
Vha464I	CTTAAG	1 cut(s)	1699
VneI	GTGCAC	1 cut(s)	420
VpaK11BI	GGWCC	1 cut(s)	395
VspI	ATTAAT	1 cut(s)	248
XapI	RAATTY	2 cut(s)	1147, 1167
XceI	RCATGY	5 cut(s)	520, 628, 658, 1262, 1566
XmiI	GTMKAC	1 cut(s)	1459
XmnI	GAANNNNTTC	2 cut(s)	715, 1690
XspI	CTAG	1 cut(s)	150
ZrmI	AGTACT	1 cut(s)	549
Zsp2I	ATGCAT	1 cut(s)	522

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.