Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2B

Orthogroup ID

OG0003124

Physical Location & Seq

Genomic Coordinates Reverse (-)

29825729 .. 29828522

Gene Structure 2794 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2BG274400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1353 bp

ATGTGGCCGCACTCCCTCCCTTCTCCTATAAACTCCCTGCAGCCACCTGTCTCGTACCTACTCTTTCTAACAATGGCCACTGTGTGCACTCCCCACACAATCTCACCCGCTGCCATTGTTTCTTCTTCTCCAGTCCGATGCTCTCACTCCCAATCGCAGCTCCTATTCCGTTCAAATTTCCTGAACCACAGCCCGAACCTCCCGATTTCGGCTACCAATTTCCGCGCCGCTACCAAAGGACGAGTTCTCTGCTCGCAAAACCCTAACCCTACCCCCACGCGCCGCCCCGAATACGTCCCCAACCGCATCTCCGACCCGAACTATATCCGCATCTTCGACACCACGCTCCGCGACGGCGAGCAGTCCCCCGGCGCCTCGCTCACCTCCAAGGAGAAGCTCAACATTGCGCGCCAGCTGGCCAAGCTCGGCGTCGACATAATCGACGCCGGGTTCCCGGCGGCGTCGAAGGACGACTTCGTAGCCGTGAAGATGATCGCGAAAGAGGTCGGGAATTTTGTGGATAAAGACGGTTATGTCCCTGTGATCTGTGGGCTGTCCAGGTGCATTGAGAAGGATATTAAGACGGCGTGGGAGGCGGTCAAGTATGCAAAGAGGCCGAGGATTCATACTTTCATTGCTACCAGTCCGATTCATATGGAGCATAAGCTGAGGAAGACGAAGGAGCAGGTGATCGAAATGGCGAGGAGTATGGTGAGCTATGCTAGGAGCTTGGGTTGCCAAGATGTCCAGTTTAGCCCGGAAGATGCCGGCAGATCTGAGAAGGAATTTCTATATCAGATTTTAGGTGAAGTTATAAAGGCCGGGGCAACAACTCTGAACATTCCTGACACTGTGGGTTATAACGTGCCAACTGAATTTGGTCAGTTGATTGCTGACATTAAATCTAATACCCCTGGAATTGATGACGTTATCATCTCGGCTCACTGCCACAATGATCTTGGACTTTCTACCGCCAACACTTTAGCGGGGGCAAGTAGAGGTGCTAGGCAATTGGAAGTAACAATCAATGGAATTGGTGAAAGGGCTGGTAATGCTTCATTAGAGGAGGTTGTCATGACCTTAAACTGCCGTGGGGAGCATGTATTTGGGGGGCTTTATACCGGAATAAATCCTCGGCATATTTATATGACAAGCAAGATGGTTTCAGAGTATACTGGAATGCATGTGCAGCAACACAAGGCTATTGTTGGAGCTAATGCTTTCTCACATGAAAGTGGTATCCATCAGGATGGAATGCTCAAGGACAAACGTACATATGAAATTATATCTCCTGAAGATATTGGGTATGACCGGTCCAGTGAAGCTGCCATTGTCCTAGGGAAACTTAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003852 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006551 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009098 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016053 GO:0016740 GO:0016746 GO:0019752 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046912 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00290 ko00620 ko01100 ko01110 ko01210 ko01230 map00290 map00620 map01100 map01110 map01210 map01230

Pfam Domains

Protein Families

HMGL-like LeuA_dimer

Protein Analysis

450

Amino Acids

49.33

Weight (kDa)

8.32

Isoelectric Point (pI)

49.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMGL-like	PF00682	109 - 388	6.2e-88	HMGL-like
HCS_D2	PF22617	402 - 441	1.9e-15	Homocitrate synthase post-HMGL domain-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18500 AT1G74040 AT1G74040 AT1G74040
fragaria_vesca	FvH4_1g22410 FvH4_1g22460 FvH4_1g22570 FvH4_1g22570 FvH4_1g22570 FvH4_1g22570
malus_domestica	MD01G1019700.v1.1 MD15G1332600.v1.1
prunus_persica	Prupe.6G172500_v2.0.a1 Prupe.6G172500_v2.0.a1 Prupe.6G172500_v2.0.a1
pyrus_communis	pycom01g04920 pycom15g29280
rosa_chinensis	RchiOBHm_Chr2g0116551 RchiOBHm_Chr2g0116561
rosa_laevigata	RLG00000018287 RLG00000018288
rosa_multiflora	Rmu_sc0001287.1_g000019 Rmu_sc0004191.1_g000022 Rmu_sc0004191.1_g000030
rosa_roxburghii	Rroxscaffold_2G00127060 Rroxscaffold_2G00127070
rosa_rugosa	Rorug02G0207600
rosa_samantha	Rh2AG262500 Rh2AG262600 Rh2BG274100 Rh2BG274400 Rh2DG270700 Rh2DG270800 Rh2DG289200 Rh2DG289300
rosa_wichuraiana	Rw2G020670 Rw2G020680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	815, 861
AarI	CACCTGC	1 cut(s)	676
AasI	GACNNNNNNGTC	1 cut(s)	533
Acc36I	ACCTGC	1 cut(s)	676
AccB1I	GGYRCC	1 cut(s)	371
AccI	GTMKAC	2 cut(s)	432, 1172
AccII	CGCG	5 cut(s)	225, 280, 351, 409, 497
AcoI	YGGCCR	3 cut(s)	5, 75, 417
AcsI	RAATTY	4 cut(s)	175, 511, 785, 875
AcuI	CTGAAG	1 cut(s)	1314
AcyI	GRCGYC	4 cut(s)	372, 429, 444, 461
AdeI	CACNNNGTG	1 cut(s)	84
AfaI	GTAC	2 cut(s)	56, 1273
AfiI	CCNNNNNNNGG	1 cut(s)	208
AgeI	ACCGGT	1 cut(s)	1311
AgsI	TTSAA	1 cut(s)	174
AjnI	CCWGG	2 cut(s)	557, 913
AluBI	AGCT	9 cut(s)	160, 397, 415, 424, 667, 717, 729, 1214, 1325
AluI	AGCT	9 cut(s)	160, 397, 415, 424, 667, 717, 729, 1214, 1325
Alw21I	GWGCWC	1 cut(s)	89
Alw26I	GTCTC	1 cut(s)	55
Alw44I	GTGCAC	1 cut(s)	85
AoxI	GGCC	5 cut(s)	5, 75, 417, 614, 819
ApaLI	GTGCAC	1 cut(s)	85
ApeKI	GCWGC	5 cut(s)	40, 110, 157, 1189, 1325
ApoI	RAATTY	4 cut(s)	175, 511, 785, 875
AsiGI	ACCGGT	1 cut(s)	1311
AspA2I	CCTAGG	1 cut(s)	1336
AspLEI	GCGC	5 cut(s)	227, 282, 374, 409, 411
AspS9I	GGNCC	1 cut(s)	1314
AsuC2I	CCSGG	5 cut(s)	369, 448, 455, 758, 823
AsuHPI	GGTGA	6 cut(s)	96, 373, 700, 724, 818, 1049
AvaII	GGWCC	1 cut(s)	1314
AvrII	CCTAGG	1 cut(s)	1336
BaeGI	GKGCMC	1 cut(s)	89
BalI	TGGCCA	2 cut(s)	77, 419
BanI	GGYRCC	1 cut(s)	371
BbsI	GAAGAC	1 cut(s)	680
Bbv12I	GWGCWC	1 cut(s)	89
BbvCI	CCTCAGC	1 cut(s)	668
BbvI	GCAGC	5 cut(s)	52, 97, 169, 1201, 1312
BccI	CCATC	3 cut(s)	1153, 1244, 1251
BceAI	ACGGC	4 cut(s)	370, 467, 600, 1074
BcgI	CGANNNNNNTGC	2 cut(s)	231, 265
BciT130I	CCWGG	2 cut(s)	559, 915
BciVI	GTATCC	1 cut(s)	1250
BcnI	CCSGG	5 cut(s)	369, 448, 455, 758, 823
BcoDI	GTCTC	1 cut(s)	55
BfaI	CTAG	3 cut(s)	723, 1005, 1337
BfmI	CTRYAG	1 cut(s)	38
BfoI	RGCGCY	1 cut(s)	375
BfuAI	ACCTGC	1 cut(s)	676
BfuI	GTATCC	1 cut(s)	1250
BglII	AGATCT	1 cut(s)	773
BisI	GCNGC	9 cut(s)	8, 41, 111, 158, 228, 283, 459, 1190, 1326
BlnI	CCTAGG	1 cut(s)	1336
BlsI	GCNGC	9 cut(s)	9, 42, 112, 159, 229, 284, 460, 1191, 1327
Bme1390I	CCNGG	7 cut(s)	369, 448, 455, 559, 758, 823, 915
Bme18I	GGWCC	1 cut(s)	1314
BmgT120I	GGNCC	1 cut(s)	1314
BmiI	GGNNCC	2 cut(s)	373, 452
BmrFI	CCNGG	7 cut(s)	369, 448, 455, 559, 758, 823, 915
BmsI	GCATC	4 cut(s)	128, 315, 339, 754
BpiI	GAAGAC	1 cut(s)	680
BpmI	CTGGAG	1 cut(s)	114
Bpu10I	CCTNAGC	1 cut(s)	668
BpuEI	CTTGAG	1 cut(s)	1244
BpuMI	CCSGG	5 cut(s)	369, 448, 455, 758, 823
BsaHI	GRCGYC	4 cut(s)	372, 429, 444, 461
BsaJI	CCNNGG	8 cut(s)	367, 387, 617, 822, 913, 1090, 1133, 1336
BsaWI	WCCGGW	2 cut(s)	1121, 1311
BsaXI	ACNNNNNCTCC	4 cut(s)	293, 323, 718, 748
Bsc4I	CCNNNNNNNGG	1 cut(s)	208
Bse118I	RCCGGY	2 cut(s)	767, 1311
Bse1I	ACTGG	5 cut(s)	131, 642, 748, 1180, 1317
Bse3DI	GCAATG	2 cut(s)	402, 633
BseBI	CCWGG	2 cut(s)	559, 915
BseDI	CCNNGG	8 cut(s)	367, 387, 617, 822, 913, 1090, 1133, 1336
BseGI	GGATG	1 cut(s)	1255
BseLI	CCNNNNNNNGG	1 cut(s)	208
BseMI	GCAATG	2 cut(s)	402, 633
BseMII	CTCAG	2 cut(s)	659, 768
BseNI	ACTGG	5 cut(s)	131, 642, 748, 1180, 1317
BsePI	GCGCGC	1 cut(s)	407
BseRI	GAGGAG	2 cut(s)	718, 1079
BseSI	GKGCMC	1 cut(s)	89
BseXI	GCAGC	5 cut(s)	52, 97, 169, 1201, 1312
BsgI	GTGCAG	1 cut(s)	1208
Bsh1236I	CGCG	5 cut(s)	225, 280, 351, 409, 497
BshFI	GGCC	5 cut(s)	7, 77, 419, 616, 821
BshNI	GGYRCC	1 cut(s)	371
BshTI	ACCGGT	1 cut(s)	1311
BsiHKAI	GWGCWC	1 cut(s)	89
BsiSI	CCGG	8 cut(s)	369, 447, 455, 758, 768, 822, 1122, 1312
BslFI	GGGAC	3 cut(s)	281, 349, 521
BslI	CCNNNNNNNGG	1 cut(s)	208
BsmAI	GTCTC	1 cut(s)	55
BsmFI	GGGAC	3 cut(s)	281, 349, 521
BsmI	GAATGC	2 cut(s)	1185, 1260
BsnI	GGCC	5 cut(s)	7, 77, 419, 616, 821
Bsp1286I	GDGCHC	1 cut(s)	89
Bsp143I	GATC	5 cut(s)	492, 543, 690, 773, 955
Bsp68I	TCGCGA	1 cut(s)	497
BspANI	GGCC	5 cut(s)	7, 77, 419, 616, 821
BspCNI	CTCAG	2 cut(s)	660, 769
BspFNI	CGCG	5 cut(s)	225, 280, 351, 409, 497
BspHI	TCATGA	1 cut(s)	1074
BspLI	GGNNCC	2 cut(s)	373, 452
BspMAI	CTGCAG	1 cut(s)	42
BspMI	ACCTGC	1 cut(s)	676
BspT107I	GGYRCC	1 cut(s)	371
BsrDI	GCAATG	2 cut(s)	402, 633
BsrFI	RCCGGY	2 cut(s)	767, 1311
BsrI	ACTGG	5 cut(s)	131, 642, 748, 1180, 1317
BssAI	RCCGGY	2 cut(s)	767, 1311
BssECI	CCNNGG	8 cut(s)	367, 387, 617, 822, 913, 1090, 1133, 1336
BssHII	GCGCGC	1 cut(s)	407
BssMI	GATC	5 cut(s)	492, 543, 690, 773, 955
BssNAI	GTATAC	1 cut(s)	1173
BssNI	GRCGYC	4 cut(s)	372, 429, 444, 461
BssT1I	CCWWGG	2 cut(s)	387, 1336
Bst1107I	GTATAC	1 cut(s)	1173
Bst2UI	CCWGG	2 cut(s)	559, 915
Bst4CI	ACNGT	3 cut(s)	82, 530, 853
BstACI	GRCGYC	4 cut(s)	372, 429, 444, 461
BstC8I	GCNNGC	6 cut(s)	254, 359, 409, 413, 417, 769
BstDEI	CTNAG	3 cut(s)	668, 777, 1346
BstDSI	CCRYGG	1 cut(s)	1090
BstF5I	GGATG	1 cut(s)	1255
BstFNI	CGCG	5 cut(s)	225, 280, 351, 409, 497
BstH2I	RGCGCY	1 cut(s)	375
BstHHI	GCGC	5 cut(s)	227, 282, 374, 409, 411
BstKTI	GATC	5 cut(s)	495, 546, 693, 776, 958
BstMAI	GTCTC	1 cut(s)	55
BstMBI	GATC	5 cut(s)	492, 543, 690, 773, 955
BstMWI	GCNNNNNNNGC	5 cut(s)	421, 593, 735, 1052, 1189
BstNI	CCWGG	2 cut(s)	559, 915
BstNSI	RCATGY	2 cut(s)	1103, 1187
BstSCI	CCNGG	7 cut(s)	367, 446, 453, 557, 756, 821, 913
BstSFI	CTRYAG	1 cut(s)	38
BstSLI	GKGCMC	1 cut(s)	89
BstUI	CGCG	5 cut(s)	225, 280, 351, 409, 497
BstV1I	GCAGC	5 cut(s)	52, 97, 169, 1201, 1312
BstV2I	GAAGAC	1 cut(s)	680
BstX2I	RGATCY	1 cut(s)	773
BstXI	CCANNNNNNTGG	1 cut(s)	1250
BstYI	RGATCY	1 cut(s)	773
BstZ17I	GTATAC	1 cut(s)	1173
BsuI	GTATCC	1 cut(s)	1250
BsuRI	GGCC	5 cut(s)	7, 77, 419, 616, 821
BtgI	CCRYGG	1 cut(s)	1090
BtsCI	GGATG	1 cut(s)	1255
BtsI	GCAGTG	1 cut(s)	943
BtsIMutI	CAGTG	4 cut(s)	78, 849, 943, 1324
BtuMI	TCGCGA	1 cut(s)	497
BveI	ACCTGC	1 cut(s)	676
Cac8I	GCNNGC	6 cut(s)	254, 359, 409, 413, 417, 769
CciI	TCATGA	1 cut(s)	1074
CfoI	GCGC	5 cut(s)	227, 282, 374, 409, 411
Cfr10I	RCCGGY	2 cut(s)	767, 1311
Cfr13I	GGNCC	1 cut(s)	1314
CseI	GACGC	3 cut(s)	418, 450, 452
Csp6I	GTAC	2 cut(s)	55, 1272
CspAI	ACCGGT	1 cut(s)	1311
CviAII	CATG	4 cut(s)	1075, 1100, 1184, 1229
CviQI	GTAC	2 cut(s)	55, 1272
DdeI	CTNAG	3 cut(s)	668, 777, 1346
DinI	GGCGCC	1 cut(s)	373
DpnI	GATC	5 cut(s)	494, 545, 692, 775, 957
DpnII	GATC	5 cut(s)	492, 543, 690, 773, 955
DraIII	CACNNNGTG	1 cut(s)	84
DrdI	GACNNNNNNGTC	1 cut(s)	533
DseDI	GACNNNNNNGTC	1 cut(s)	533
EaeI	YGGCCR	3 cut(s)	5, 75, 417
Eco130I	CCWWGG	2 cut(s)	387, 1336
Eco47I	GGWCC	1 cut(s)	1314
Eco57I	CTGAAG	1 cut(s)	1314
EcoRII	CCWGG	2 cut(s)	557, 913
EcoT14I	CCWWGG	2 cut(s)	387, 1336
EcoT22I	ATGCAT	1 cut(s)	1185
EgeI	GGCGCC	1 cut(s)	373
EheI	GGCGCC	1 cut(s)	373
ErhI	CCWWGG	2 cut(s)	387, 1336
FaeI	CATG	4 cut(s)	1078, 1103, 1187, 1232
FalI	AAGNNNNNCTT	2 cut(s)	458, 490
FaqI	GGGAC	3 cut(s)	281, 349, 521
FatI	CATG	4 cut(s)	1074, 1099, 1183, 1228
FauI	CCCGC	2 cut(s)	115, 979
FauNDI	CATATG	2 cut(s)	654, 1276
FblI	GTMKAC	2 cut(s)	432, 1172
Fnu4HI	GCNGC	9 cut(s)	8, 41, 111, 158, 228, 283, 459, 1190, 1326
FokI	GGATG	1 cut(s)	1262
Fsp4HI	GCNGC	9 cut(s)	8, 41, 111, 158, 228, 283, 459, 1190, 1326
FspBI	CTAG	3 cut(s)	723, 1005, 1337
GlaI	GCGC	5 cut(s)	226, 281, 373, 408, 410
GluI	GCNGC	9 cut(s)	8, 41, 111, 158, 228, 283, 459, 1190, 1326
GsuI	CTGGAG	1 cut(s)	114
HaeII	RGCGCY	1 cut(s)	375
HaeIII	GGCC	5 cut(s)	7, 77, 419, 616, 821
HapII	CCGG	8 cut(s)	369, 447, 455, 758, 768, 822, 1122, 1312
HgaI	GACGC	3 cut(s)	418, 450, 452
HhaI	GCGC	5 cut(s)	227, 282, 374, 409, 411
Hin1I	GRCGYC	4 cut(s)	372, 429, 444, 461
Hin1II	CATG	4 cut(s)	1078, 1103, 1187, 1232
Hin6I	GCGC	5 cut(s)	225, 280, 372, 407, 409
HinP1I	GCGC	5 cut(s)	225, 280, 372, 407, 409
HincII	GTYRAC	1 cut(s)	433
HindII	GTYRAC	1 cut(s)	433
HinfI	GANTC	2 cut(s)	622, 649
HpaII	CCGG	8 cut(s)	369, 447, 455, 758, 768, 822, 1122, 1312
HphI	GGTGA	6 cut(s)	96, 373, 700, 724, 818, 1049
Hpy166II	GTNNAC	3 cut(s)	87, 433, 1173
Hpy188I	TCNGA	7 cut(s)	137, 313, 648, 778, 798, 837, 1168
Hpy188III	TCNNGA	8 cut(s)	181, 202, 496, 508, 845, 1075, 1247, 1292
Hpy8I	GTNNAC	3 cut(s)	87, 433, 1173
Hpy99I	CGWCG	4 cut(s)	356, 434, 446, 466
HpyAV	CCTTC	5 cut(s)	30, 460, 565, 673, 775
HpyCH4III	ACNGT	3 cut(s)	82, 530, 853
HpyCH4IV	ACGT	4 cut(s)	294, 864, 927, 1270
HpyCH4V	TGCA	6 cut(s)	40, 87, 564, 608, 1183, 1189
HpyF10VI	GCNNNNNNNGC	5 cut(s)	421, 593, 735, 1052, 1189
HpyF3I	CTNAG	3 cut(s)	668, 777, 1346
HpySE526I	ACGT	4 cut(s)	294, 864, 927, 1270
Hsp92I	GRCGYC	4 cut(s)	372, 429, 444, 461
Hsp92II	CATG	4 cut(s)	1078, 1103, 1187, 1232
HspAI	GCGC	5 cut(s)	225, 280, 372, 407, 409
KasI	GGCGCC	1 cut(s)	371
KroI	GCCGGC	1 cut(s)	767
KroNI	GCCGGC	1 cut(s)	769
Kzo9I	GATC	5 cut(s)	492, 543, 690, 773, 955
LmnI	GCTCC	7 cut(s)	165, 351, 658, 682, 726, 1096, 1211
Lsp1109I	GCAGC	5 cut(s)	52, 97, 169, 1201, 1312
LweI	GCATC	4 cut(s)	128, 315, 339, 754
MaeI	CTAG	3 cut(s)	723, 1005, 1337
MaeII	ACGT	4 cut(s)	294, 864, 927, 1270
MaeIII	GTNAC	1 cut(s)	1018
MalI	GATC	5 cut(s)	494, 545, 692, 775, 957
MboI	GATC	5 cut(s)	492, 543, 690, 773, 955
MboII	GAAGA	7 cut(s)	114, 117, 325, 499, 685, 773, 1307
MfeI	CAATTG	1 cut(s)	1010
MflI	RGATCY	1 cut(s)	773
MhlI	GDGCHC	1 cut(s)	89
MlsI	TGGCCA	2 cut(s)	77, 419
MluCI	AATT	9 cut(s)	175, 217, 511, 785, 875, 918, 1010, 1032, 1281
MluNI	TGGCCA	2 cut(s)	77, 419
Mly113I	GGCGCC	1 cut(s)	372
MmeI	TCCRAC	2 cut(s)	336, 1189
Mox20I	TGGCCA	2 cut(s)	77, 419
Mph1103I	ATGCAT	1 cut(s)	1185
MroNI	GCCGGC	1 cut(s)	767
MscI	TGGCCA	2 cut(s)	77, 419
MseI	TTAA	3 cut(s)	579, 900, 1082
MslI	CAYNNNNRTG	2 cut(s)	1233, 1248
Msp20I	TGGCCA	2 cut(s)	77, 419
MspA1I	CMGCKG	2 cut(s)	110, 415
MspI	CCGG	8 cut(s)	369, 447, 455, 758, 768, 822, 1122, 1312
MspR9I	CCNGG	7 cut(s)	369, 448, 455, 559, 758, 823, 915
MunI	CAATTG	1 cut(s)	1010
Mva1269I	GAATGC	2 cut(s)	1185, 1260
MvaI	CCWGG	2 cut(s)	559, 915
MvnI	CGCG	5 cut(s)	225, 280, 351, 409, 497
MwoI	GCNNNNNNNGC	5 cut(s)	421, 593, 735, 1052, 1189
NaeI	GCCGGC	1 cut(s)	769
NarI	GGCGCC	1 cut(s)	372
NciI	CCSGG	5 cut(s)	369, 448, 455, 758, 823
NdeI	CATATG	2 cut(s)	654, 1276
NdeII	GATC	5 cut(s)	492, 543, 690, 773, 955
NgoMIV	GCCGGC	1 cut(s)	767
NlaIII	CATG	4 cut(s)	1078, 1103, 1187, 1232
NlaIV	GGNNCC	2 cut(s)	373, 452
NmeAIII	GCCGAG	4 cut(s)	405, 642, 917, 1114
NruI	TCGCGA	1 cut(s)	497
NsiI	ATGCAT	1 cut(s)	1185
NspI	RCATGY	2 cut(s)	1103, 1187
PagI	TCATGA	1 cut(s)	1074
PaqCI	CACCTGC	1 cut(s)	676
PauI	GCGCGC	1 cut(s)	407
PcsI	WCGNNNNNNNCGW	1 cut(s)	438
PctI	GAATGC	2 cut(s)	1185, 1260
PdiI	GCCGGC	1 cut(s)	769
PfeI	GAWTC	2 cut(s)	622, 649
PinAI	ACCGGT	1 cut(s)	1311
PkrI	GCNGC	9 cut(s)	9, 42, 112, 159, 229, 284, 460, 1191, 1327
PluTI	GGCGCC	1 cut(s)	375
PsiI	TTATAA	2 cut(s)	815, 861
Psp6I	CCWGG	2 cut(s)	557, 913
PspGI	CCWGG	2 cut(s)	557, 913
PspN4I	GGNNCC	2 cut(s)	373, 452
PspPI	GGNCC	1 cut(s)	1314
PstI	CTGCAG	1 cut(s)	42
PsuI	RGATCY	1 cut(s)	773
PteI	GCGCGC	1 cut(s)	407
PvuII	CAGCTG	1 cut(s)	415
RruI	TCGCGA	1 cut(s)	497
RsaI	GTAC	2 cut(s)	56, 1273
RsaNI	GTAC	2 cut(s)	55, 1272
RseI	CAYNNNNRTG	2 cut(s)	1233, 1248
SalI	GTCGAC	1 cut(s)	431
SaqAI	TTAA	3 cut(s)	579, 900, 1082
SatI	GCNGC	9 cut(s)	8, 41, 111, 158, 228, 283, 459, 1190, 1326
Sau3AI	GATC	5 cut(s)	492, 543, 690, 773, 955
Sau96I	GGNCC	1 cut(s)	1314
ScrFI	CCNGG	7 cut(s)	369, 448, 455, 559, 758, 823, 915
SduI	GDGCHC	1 cut(s)	89
SfaNI	GCATC	4 cut(s)	128, 315, 339, 754
SfcI	CTRYAG	1 cut(s)	38
SfoI	GGCGCC	1 cut(s)	373
SinI	GGWCC	1 cut(s)	1314
SmiMI	CAYNNNNRTG	2 cut(s)	1233, 1248
SmlI	CTYRAG	1 cut(s)	1259
SmoI	CTYRAG	1 cut(s)	1259
Sse9I	AATT	9 cut(s)	175, 217, 511, 785, 875, 918, 1010, 1032, 1281
SspDI	GGCGCC	1 cut(s)	371
SspMI	CTAG	3 cut(s)	723, 1005, 1337
StyD4I	CCNGG	7 cut(s)	367, 446, 453, 557, 756, 821, 913
StyI	CCWWGG	2 cut(s)	387, 1336
TaaI	ACNGT	3 cut(s)	82, 530, 853
TaiI	ACGT	4 cut(s)	297, 867, 930, 1273
TaqI	TCGA	5 cut(s)	336, 432, 441, 464, 693
TasI	AATT	9 cut(s)	175, 217, 511, 785, 875, 918, 1010, 1032, 1281
TauI	GCSGC	4 cut(s)	10, 230, 285, 461
TfiI	GAWTC	2 cut(s)	622, 649
Tru1I	TTAA	3 cut(s)	579, 900, 1082
Tru9I	TTAA	3 cut(s)	579, 900, 1082
TscAI	CASTG	4 cut(s)	85, 856, 950, 1324
TseI	GCWGC	5 cut(s)	40, 110, 157, 1189, 1325
TspDTI	ATGAA	6 cut(s)	614, 622, 641, 1047, 1245, 1293
TspGWI	ACGGA	1 cut(s)	158
TspRI	CASTG	4 cut(s)	85, 856, 950, 1324
VneI	GTGCAC	1 cut(s)	85
VpaK11BI	GGWCC	1 cut(s)	1314
XapI	RAATTY	4 cut(s)	175, 511, 785, 875
XceI	RCATGY	2 cut(s)	1103, 1187
XcmI	CCANNNNNNNNNTGG	1 cut(s)	956
XmaJI	CCTAGG	1 cut(s)	1336
XmiI	GTMKAC	2 cut(s)	432, 1172
XspI	CTAG	3 cut(s)	723, 1005, 1337
Zsp2I	ATGCAT	1 cut(s)	1185

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.