Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr4

Orthogroup ID

OG0003124

Physical Location & Seq

Genomic Coordinates Reverse (-)

27958269 .. 27964799

Gene Structure 6531 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000018288

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1938 bp

ATGGCAGAAGATGAGACCGCCGCAACAACACCACCACAGATGGAAGAAGAAGAGGAGGCAACAACCGTGCAACCACCGGGGAAAGAAGAAGAAGAGGATGCATCCCTAATCCGACCCGAATCCGGAGAAGAAAATGCATTCCGAACCGAATCCGACACAACAACTATCCAAGCAATCGGAGAAGAAGAGGAACCACCGGTGGCTGAAGAAGACGACGCAGCCACGACCCAATCCGGTGAAGAGAACGCAGTCGGTCCAACCTCGGCCGACACAGACCTCAACCACCGCCGCCACCACCGCCGCATCCCCTCCCTGGAGTCGCGGAAACGTGAGCCGTGCGAGTCGACGGTCGAGGACGAGAAGGAACGCCAAAAGCCACCCGTTTCGTACCTCCTGTTTCTAACAATGGCTACTGTGTGCACTCCCCACACAATCTCACGCGCTGCCATTGTTTCTTCTTCTCTAGTCCGATGCTCTGACTCCCAATCGCAGCTCCTATTCAGTTCAAAATTCCAGAACCACCTCCCCCACCACAGCCCGAACCTCCCTATTTCGGCTCCCAATCTCCGAGCCGCTACCAAAGGACGAGTTCTCTGCTCACAAAACCCTAACCCTAACCCTACCCCCACTCGCCTCCCCGACTACGTCCCCAACCGCATCTCCGACCCGAACTATGTCCGCATCTTCGACACCACGCTCCGCGACGGCGAGCAGTCCCCCGGCGCCTCCCTCACCTCCAAGGAGAAGCTCGACATTGCGCGCCAGCTGGCCAAGCTCGGCGTCGACATAATCGACGCTGGGTTCCCGGCGGCTTCGAAGGACGACTTCGTAGCCGTGAAGATGATCGCGAAAGAGGTCGGGAATTTTGTGGATAAAGACGGTTATGTCCCTGTGATCTGTGGGCTGTCCAGGTGCAATGAGAAGGATATTAAGACGGCGTGGGAGGCGGTCAAGTACGCAAAGAGGCCGAGGATTCATACTTTCATTGCTACCAGTCCGATTCATATGGAGCATAAGCTGAGGAAGACGAAGGAGCAGGTGATCGAAATGGCGAGGAGTATGGTGAGCTATGCTAGGAGCTTGGGTTGCCAAGATGTCCAGTTTAGCCCGGAAGATGCCGGCAGATCTGAGAAGGAATTTCTATATCAGATTTTAGGTGAAGTTATAAAGGCCGGGGCAACAACTCTGAACATTCCTGACACTGTGGGTTATACCGTGCCAACTGAATTTGGTCAGTTGATTGCTGACATTAAATCTAATACCCCTGGAATTGATGACGTTATCATCTCGGCTCACTGCCACAATGATCTTGGACTTTCTACTGCCAACACTTTAGCGGGGGCAAGTAGAGGTGCTAGGCAATTGGAAGTAACAATCAATGGAATTGGTGAAAGGGCTGGTAATGCTTCATTAGAGGAGGTTGTCATGACCTTAAACTGCCTTGGGGAGCATGTATTTGGGGGGCTTTATACCGGAATAAATCCTCGGCATTTTTATATGACAAGCAAGATGGTTTCAGAGTACACTGGAATGCATGTGCAGCCACACAAGGCTATTGTTGGAGCTAATGCTTTTGCACATGAAAGTGGTATCCACCAGGATGGAATGCTTAAGGACAAACGTACATATGAAATTATATCTCCTGAAGATATTGGGTATGTCCGGTCCAGTGAAGCTGGCATTGTCCTAGGGAAACTTAGTGGACGCCATGCTTTGAAAAAGCAGCTTCAACAGCTTGGTTATGAGCTTGATGATGTTCAACTTGAGACTGTATTCTGGCGCTTCAAAGGAGTAGCTGAACAGAAAAAGAGAGTCACTGATGCAGACCTCAGAGCATTGGTGTCAGATGAAGTTTTTCAGCCAGAAGTTGTCTGGAAGCTTCATGATCTACAGGTGAGTCGTGACAGTTTCCAACTTAATTTGTTGCTCATCTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003852 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006551 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009098 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016053 GO:0016740 GO:0016746 GO:0019752 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046912 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00290 ko00620 ko01100 ko01110 ko01210 ko01230 map00290 map00620 map01100 map01110 map01210 map01230

Pfam Domains

Protein Families

HMGL-like LeuA_dimer

Protein Analysis

646

Amino Acids

71.25

Weight (kDa)

5.32

Isoelectric Point (pI)

49.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMGL-like	PF00682	226 - 505	3.2e-88	HMGL-like
HCS_D2	PF22617	519 - 603	6.3e-28	Homocitrate synthase post-HMGL domain-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18500 AT1G74040 AT1G74040 AT1G74040
fragaria_vesca	FvH4_1g22410 FvH4_1g22460 FvH4_1g22570 FvH4_1g22570 FvH4_1g22570 FvH4_1g22570
malus_domestica	MD01G1019700.v1.1 MD15G1332600.v1.1
prunus_persica	Prupe.6G172500_v2.0.a1 Prupe.6G172500_v2.0.a1 Prupe.6G172500_v2.0.a1
pyrus_communis	pycom01g04920 pycom15g29280
rosa_chinensis	RchiOBHm_Chr2g0116551 RchiOBHm_Chr2g0116561
rosa_laevigata	RLG00000018287 RLG00000018288
rosa_multiflora	Rmu_sc0001287.1_g000019 Rmu_sc0004191.1_g000022 Rmu_sc0004191.1_g000030
rosa_roxburghii	Rroxscaffold_2G00127060 Rroxscaffold_2G00127070
rosa_rugosa	Rorug02G0207600
rosa_samantha	Rh2AG262500 Rh2AG262600 Rh2BG274100 Rh2BG274400 Rh2DG270700 Rh2DG270800 Rh2DG289200 Rh2DG289300
rosa_wichuraiana	Rw2G020670 Rw2G020680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1166
AarI	CACCTGC	1 cut(s)	1027
AasI	GACNNNNNNGTC	1 cut(s)	884
Acc36I	ACCTGC	1 cut(s)	1027
AccB1I	GGYRCC	1 cut(s)	722
AccI	GTMKAC	2 cut(s)	344, 783
AccII	CGCG	5 cut(s)	322, 441, 702, 760, 848
AccIII	TCCGGA	1 cut(s)	122
AcoI	YGGCCR	2 cut(s)	264, 768
AcsI	RAATTY	4 cut(s)	509, 862, 1136, 1226
AcuI	CTGAAG	2 cut(s)	225, 1665
AcyI	GRCGYC	3 cut(s)	723, 780, 1705
AfaI	GTAC	4 cut(s)	389, 956, 1523, 1624
AfiI	CCNNNNNNNGG	3 cut(s)	122, 313, 553
AflII	CTTAAG	1 cut(s)	1610
AgeI	ACCGGT	1 cut(s)	196
AgsI	TTSAA	5 cut(s)	507, 1717, 1730, 1760, 1786
AjnI	CCWGG	4 cut(s)	312, 908, 1264, 1596
Alw21I	GWGCWC	1 cut(s)	422
Alw26I	GTCTC	2 cut(s)	8, 1760
Alw44I	GTGCAC	1 cut(s)	418
Aor13HI	TCCGGA	1 cut(s)	122
AoxI	GGCC	4 cut(s)	264, 768, 965, 1170
ApaLI	GTGCAC	1 cut(s)	418
ApeKI	GCWGC	5 cut(s)	218, 443, 490, 1540, 1723
ApoI	RAATTY	4 cut(s)	509, 862, 1136, 1226
AsiGI	ACCGGT	1 cut(s)	196
Asp700I	GAANNNNTTC	1 cut(s)	1854
AspA2I	CCTAGG	1 cut(s)	1687
AspLEI	GCGC	5 cut(s)	443, 725, 760, 762, 1782
AspS9I	GGNCC	2 cut(s)	254, 1665
AsuC2I	CCSGG	5 cut(s)	78, 720, 806, 1109, 1174
AsuHPI	GGTGA	7 cut(s)	248, 724, 1051, 1075, 1169, 1400, 1906
AsuII	TTCGAA	1 cut(s)	815
AvaII	GGWCC	2 cut(s)	254, 1665
AvrII	CCTAGG	1 cut(s)	1687
BaeGI	GKGCMC	1 cut(s)	422
BalI	TGGCCA	1 cut(s)	770
BanI	GGYRCC	1 cut(s)	722
BbsI	GAAGAC	2 cut(s)	216, 1031
Bbv12I	GWGCWC	1 cut(s)	422
BbvCI	CCTCAGC	1 cut(s)	1019
BbvI	GCAGC	5 cut(s)	230, 430, 502, 1552, 1735
BccI	CCATC	3 cut(s)	34, 1504, 1595
BceAI	ACGGC	4 cut(s)	319, 721, 818, 951
BcgI	CGANNNNNNTGC	2 cut(s)	576, 610
BciT130I	CCWGG	4 cut(s)	314, 910, 1266, 1598
BciVI	GTATCC	1 cut(s)	1601
BcnI	CCSGG	5 cut(s)	78, 720, 806, 1109, 1174
BcoDI	GTCTC	2 cut(s)	8, 1760
BfaI	CTAG	4 cut(s)	464, 1074, 1356, 1688
BfmI	CTRYAG	1 cut(s)	1889
BfoI	RGCGCY	2 cut(s)	726, 1783
BfrI	CTTAAG	1 cut(s)	1610
BfuAI	ACCTGC	1 cut(s)	1027
BfuI	GTATCC	1 cut(s)	1601
BglII	AGATCT	1 cut(s)	1124
BlnI	CCTAGG	1 cut(s)	1687
Bme1390I	CCNGG	9 cut(s)	78, 314, 720, 806, 910, 1109, 1174, 1266, 1598
Bme18I	GGWCC	2 cut(s)	254, 1665
BmgT120I	GGNCC	2 cut(s)	254, 1665
BmiI	GGNNCC	4 cut(s)	192, 558, 724, 803
BmrFI	CCNGG	9 cut(s)	78, 314, 720, 806, 910, 1109, 1174, 1266, 1598
BmsI	GCATC	8 cut(s)	88, 110, 312, 461, 666, 690, 1105, 1810
BpiI	GAAGAC	2 cut(s)	216, 1031
BpmI	CTGGAG	1 cut(s)	335
Bpu10I	CCTNAGC	1 cut(s)	1019
Bpu14I	TTCGAA	1 cut(s)	815
BpuEI	CTTGAG	1 cut(s)	1784
BpuMI	CCSGG	5 cut(s)	78, 720, 806, 1109, 1174
BsaHI	GRCGYC	3 cut(s)	723, 780, 1705
BsaI	GGTCTC	1 cut(s)	8
BsaWI	WCCGGW	5 cut(s)	122, 196, 233, 1472, 1662
BsaXI	ACNNNNNCTCC	4 cut(s)	644, 674, 1069, 1099
Bsc4I	CCNNNNNNNGG	3 cut(s)	122, 313, 553
Bse118I	RCCGGY	2 cut(s)	196, 1118
Bse1I	ACTGG	4 cut(s)	993, 1099, 1531, 1668
Bse3DI	GCAATG	3 cut(s)	753, 922, 984
BseAI	TCCGGA	1 cut(s)	122
BseBI	CCWGG	4 cut(s)	314, 910, 1266, 1598
BseGI	GGATG	4 cut(s)	101, 103, 303, 1606
BseLI	CCNNNNNNNGG	3 cut(s)	122, 313, 553
BseMI	GCAATG	3 cut(s)	753, 922, 984
BseMII	CTCAG	3 cut(s)	1010, 1119, 1843
BseNI	ACTGG	4 cut(s)	993, 1099, 1531, 1668
BsePI	GCGCGC	1 cut(s)	758
BseRI	GAGGAG	3 cut(s)	68, 1069, 1430
BseSI	GKGCMC	1 cut(s)	422
BseX3I	CGGCCG	1 cut(s)	264
BseXI	GCAGC	5 cut(s)	230, 430, 502, 1552, 1735
BseYI	CCCAGC	1 cut(s)	797
BsgI	GTGCAG	1 cut(s)	1559
Bsh1236I	CGCG	5 cut(s)	322, 441, 702, 760, 848
Bsh1285I	CGRYCG	2 cut(s)	267, 351
BshFI	GGCC	4 cut(s)	266, 770, 967, 1172
BshNI	GGYRCC	1 cut(s)	722
BshTI	ACCGGT	1 cut(s)	196
BsiEI	CGRYCG	2 cut(s)	267, 351
BsiHKAI	GWGCWC	1 cut(s)	422
BslFI	GGGAC	3 cut(s)	632, 700, 872
BslI	CCNNNNNNNGG	3 cut(s)	122, 313, 553
BsmAI	GTCTC	2 cut(s)	8, 1760
BsmFI	GGGAC	3 cut(s)	632, 700, 872
BsmI	GAATGC	3 cut(s)	137, 1536, 1611
BsnI	GGCC	4 cut(s)	266, 770, 967, 1172
Bso31I	GGTCTC	1 cut(s)	8
Bsp119I	TTCGAA	1 cut(s)	815
Bsp1286I	GDGCHC	1 cut(s)	422
Bsp13I	TCCGGA	1 cut(s)	122
Bsp143I	GATC	6 cut(s)	843, 894, 1041, 1124, 1306, 1885
Bsp68I	TCGCGA	1 cut(s)	848
BspANI	GGCC	4 cut(s)	266, 770, 967, 1172
BspCNI	CTCAG	3 cut(s)	1011, 1120, 1842
BspEI	TCCGGA	1 cut(s)	122
BspFNI	CGCG	5 cut(s)	322, 441, 702, 760, 848
BspHI	TCATGA	2 cut(s)	1425, 1882
BspLI	GGNNCC	4 cut(s)	192, 558, 724, 803
BspMI	ACCTGC	1 cut(s)	1027
BspT104I	TTCGAA	1 cut(s)	815
BspT107I	GGYRCC	1 cut(s)	722
BspTI	CTTAAG	1 cut(s)	1610
BspTNI	GGTCTC	1 cut(s)	8
BsrDI	GCAATG	3 cut(s)	753, 922, 984
BsrFI	RCCGGY	2 cut(s)	196, 1118
BsrI	ACTGG	4 cut(s)	993, 1099, 1531, 1668
BssAI	RCCGGY	2 cut(s)	196, 1118
BssHII	GCGCGC	1 cut(s)	758
BssMI	GATC	6 cut(s)	843, 894, 1041, 1124, 1306, 1885
BssNI	GRCGYC	3 cut(s)	723, 780, 1705
BssT1I	CCWWGG	3 cut(s)	738, 1441, 1687
Bst2UI	CCWGG	4 cut(s)	314, 910, 1266, 1598
Bst4CI	ACNGT	8 cut(s)	67, 349, 415, 881, 1204, 1216, 1771, 1907
Bst6I	CTCTTC	4 cut(s)	45, 87, 180, 234
BstACI	GRCGYC	3 cut(s)	723, 780, 1705
BstAFI	CTTAAG	1 cut(s)	1610
BstBI	TTCGAA	1 cut(s)	815
BstC8I	GCNNGC	6 cut(s)	710, 760, 764, 768, 1120, 1678
BstDEI	CTNAG	4 cut(s)	1019, 1128, 1697, 1829
BstF5I	GGATG	4 cut(s)	101, 103, 303, 1606
BstFNI	CGCG	5 cut(s)	322, 441, 702, 760, 848
BstH2I	RGCGCY	2 cut(s)	726, 1783
BstHHI	GCGC	5 cut(s)	443, 725, 760, 762, 1782
BstKTI	GATC	6 cut(s)	846, 897, 1044, 1127, 1309, 1888
BstMAI	GTCTC	2 cut(s)	8, 1760
BstMBI	GATC	6 cut(s)	843, 894, 1041, 1124, 1306, 1885
BstMCI	CGRYCG	2 cut(s)	267, 351
BstMWI	GCNNNNNNNGC	7 cut(s)	297, 772, 944, 1086, 1403, 1540, 1732
BstNI	CCWGG	4 cut(s)	314, 910, 1266, 1598
BstNSI	RCATGY	2 cut(s)	1454, 1538
BstSCI	CCNGG	9 cut(s)	76, 312, 718, 804, 908, 1107, 1172, 1264, 1596
BstSFI	CTRYAG	1 cut(s)	1889
BstSLI	GKGCMC	1 cut(s)	422
BstUI	CGCG	5 cut(s)	322, 441, 702, 760, 848
BstV1I	GCAGC	5 cut(s)	230, 430, 502, 1552, 1735
BstV2I	GAAGAC	2 cut(s)	216, 1031
BstX2I	RGATCY	1 cut(s)	1124
BstXI	CCANNNNNNTGG	1 cut(s)	1601
BstYI	RGATCY	1 cut(s)	1124
BstZI	CGGCCG	1 cut(s)	264
BsuI	GTATCC	1 cut(s)	1601
BsuRI	GGCC	4 cut(s)	266, 770, 967, 1172
BtsCI	GGATG	4 cut(s)	101, 103, 303, 1606
BtsI	GCAGTG	1 cut(s)	1294
BtsIMutI	CAGTG	5 cut(s)	1200, 1294, 1524, 1675, 1815
BtuMI	TCGCGA	1 cut(s)	848
BveI	ACCTGC	1 cut(s)	1027
Cac8I	GCNNGC	6 cut(s)	710, 760, 764, 768, 1120, 1678
CciI	TCATGA	2 cut(s)	1425, 1882
CfoI	GCGC	5 cut(s)	443, 725, 760, 762, 1782
Cfr10I	RCCGGY	2 cut(s)	196, 1118
Cfr13I	GGNCC	2 cut(s)	254, 1665
CseI	GACGC	4 cut(s)	224, 769, 803, 1713
Csp6I	GTAC	4 cut(s)	388, 955, 1522, 1623
CspAI	ACCGGT	1 cut(s)	196
CviAII	CATG	6 cut(s)	1426, 1451, 1535, 1580, 1709, 1883
CviQI	GTAC	4 cut(s)	388, 955, 1522, 1623
DdeI	CTNAG	4 cut(s)	1019, 1128, 1697, 1829
DinI	GGCGCC	1 cut(s)	724
DpnI	GATC	6 cut(s)	845, 896, 1043, 1126, 1308, 1887
DpnII	GATC	6 cut(s)	843, 894, 1041, 1124, 1306, 1885
DrdI	GACNNNNNNGTC	1 cut(s)	884
DseDI	GACNNNNNNGTC	1 cut(s)	884
EaeI	YGGCCR	2 cut(s)	264, 768
EagI	CGGCCG	1 cut(s)	264
Eam1104I	CTCTTC	4 cut(s)	45, 87, 180, 234
EarI	CTCTTC	4 cut(s)	45, 87, 180, 234
EclXI	CGGCCG	1 cut(s)	264
Eco130I	CCWWGG	3 cut(s)	738, 1441, 1687
Eco31I	GGTCTC	1 cut(s)	8
Eco47I	GGWCC	2 cut(s)	254, 1665
Eco52I	CGGCCG	1 cut(s)	264
Eco57I	CTGAAG	2 cut(s)	225, 1665
EcoRII	CCWGG	4 cut(s)	312, 908, 1264, 1596
EcoT14I	CCWWGG	3 cut(s)	738, 1441, 1687
EcoT22I	ATGCAT	3 cut(s)	103, 139, 1536
EgeI	GGCGCC	1 cut(s)	724
EheI	GGCGCC	1 cut(s)	724
ErhI	CCWWGG	3 cut(s)	738, 1441, 1687
FaeI	CATG	6 cut(s)	1429, 1454, 1538, 1583, 1712, 1886
FalI	AAGNNNNNCTT	2 cut(s)	809, 841
FaqI	GGGAC	3 cut(s)	632, 700, 872
FatI	CATG	6 cut(s)	1425, 1450, 1534, 1579, 1708, 1882
FauI	CCCGC	1 cut(s)	1330
FauNDI	CATATG	2 cut(s)	1005, 1627
FblI	GTMKAC	2 cut(s)	344, 783
FokI	GGATG	4 cut(s)	88, 110, 290, 1613
FspBI	CTAG	4 cut(s)	464, 1074, 1356, 1688
GlaI	GCGC	5 cut(s)	442, 724, 759, 761, 1781
GsaI	CCCAGC	1 cut(s)	801
GsuI	CTGGAG	1 cut(s)	335
HaeII	RGCGCY	2 cut(s)	726, 1783
HaeIII	GGCC	4 cut(s)	266, 770, 967, 1172
HgaI	GACGC	4 cut(s)	224, 769, 803, 1713
HhaI	GCGC	5 cut(s)	443, 725, 760, 762, 1782
Hin1I	GRCGYC	3 cut(s)	723, 780, 1705
Hin1II	CATG	6 cut(s)	1429, 1454, 1538, 1583, 1712, 1886
Hin6I	GCGC	5 cut(s)	441, 723, 758, 760, 1780
HinP1I	GCGC	5 cut(s)	441, 723, 758, 760, 1780
HincII	GTYRAC	2 cut(s)	345, 784
HindII	GTYRAC	2 cut(s)	345, 784
HindIII	AAGCTT	1 cut(s)	1877
HinfI	GANTC	9 cut(s)	119, 149, 317, 341, 479, 973, 1000, 1812, 1897
HphI	GGTGA	7 cut(s)	248, 724, 1051, 1075, 1169, 1400, 1906
Hpy166II	GTNNAC	5 cut(s)	345, 420, 784, 1524, 1703
Hpy8I	GTNNAC	5 cut(s)	345, 420, 784, 1524, 1703
Hpy99I	CGWCG	5 cut(s)	218, 349, 707, 785, 797
HpyAV	CCTTC	5 cut(s)	355, 811, 916, 1024, 1126
HpyCH4III	ACNGT	8 cut(s)	67, 349, 415, 881, 1204, 1216, 1771, 1907
HpyCH4IV	ACGT	4 cut(s)	328, 645, 1278, 1621
HpyCH4V	TGCA	9 cut(s)	70, 101, 137, 420, 915, 1534, 1540, 1577, 1823
HpyF10VI	GCNNNNNNNGC	7 cut(s)	297, 772, 944, 1086, 1403, 1540, 1732
HpyF3I	CTNAG	4 cut(s)	1019, 1128, 1697, 1829
HpySE526I	ACGT	4 cut(s)	328, 645, 1278, 1621
Hsp92I	GRCGYC	3 cut(s)	723, 780, 1705
Hsp92II	CATG	6 cut(s)	1429, 1454, 1538, 1583, 1712, 1886
HspAI	GCGC	5 cut(s)	441, 723, 758, 760, 1780
KasI	GGCGCC	1 cut(s)	722
Kpn2I	TCCGGA	1 cut(s)	122
KroI	GCCGGC	1 cut(s)	1118
KroNI	GCCGGC	1 cut(s)	1120
Kzo9I	GATC	6 cut(s)	843, 894, 1041, 1124, 1306, 1885
LmnI	GCTCC	8 cut(s)	498, 562, 702, 1009, 1033, 1077, 1447, 1562
Lsp1109I	GCAGC	5 cut(s)	230, 430, 502, 1552, 1735
LweI	GCATC	8 cut(s)	88, 110, 312, 461, 666, 690, 1105, 1810
MaeI	CTAG	4 cut(s)	464, 1074, 1356, 1688
MaeII	ACGT	4 cut(s)	328, 645, 1278, 1621
MaeIII	GTNAC	3 cut(s)	1369, 1813, 1901
MalI	GATC	6 cut(s)	845, 896, 1043, 1126, 1308, 1887
MboI	GATC	6 cut(s)	843, 894, 1041, 1124, 1306, 1885
MfeI	CAATTG	1 cut(s)	1361
MflI	RGATCY	1 cut(s)	1124
MhlI	GDGCHC	1 cut(s)	422
MlsI	TGGCCA	1 cut(s)	770
MluCI	AATT	9 cut(s)	509, 862, 1136, 1226, 1269, 1361, 1383, 1632, 1918
MluNI	TGGCCA	1 cut(s)	770
Mly113I	GGCGCC	1 cut(s)	723
MlyI	GAGTC	5 cut(s)	326, 350, 473, 1821, 1906
MmeI	TCCRAC	6 cut(s)	136, 177, 281, 687, 1540, 1936
Mox20I	TGGCCA	1 cut(s)	770
Mph1103I	ATGCAT	3 cut(s)	103, 139, 1536
MroI	TCCGGA	1 cut(s)	122
MroNI	GCCGGC	1 cut(s)	1118
MroXI	GAANNNNTTC	1 cut(s)	1854
MscI	TGGCCA	1 cut(s)	770
MseI	TTAA	5 cut(s)	930, 1251, 1433, 1611, 1917
MslI	CAYNNNNRTG	3 cut(s)	1529, 1584, 1599
Msp20I	TGGCCA	1 cut(s)	770
MspA1I	CMGCKG	1 cut(s)	766
MspCI	CTTAAG	1 cut(s)	1610
MspR9I	CCNGG	9 cut(s)	78, 314, 720, 806, 910, 1109, 1174, 1266, 1598
MunI	CAATTG	1 cut(s)	1361
Mva1269I	GAATGC	3 cut(s)	137, 1536, 1611
MvaI	CCWGG	4 cut(s)	314, 910, 1266, 1598
MvnI	CGCG	5 cut(s)	322, 441, 702, 760, 848
MwoI	GCNNNNNNNGC	7 cut(s)	297, 772, 944, 1086, 1403, 1540, 1732
NaeI	GCCGGC	1 cut(s)	1120
NarI	GGCGCC	1 cut(s)	723
NciI	CCSGG	5 cut(s)	78, 720, 806, 1109, 1174
NdeI	CATATG	2 cut(s)	1005, 1627
NdeII	GATC	6 cut(s)	843, 894, 1041, 1124, 1306, 1885
NgoMIV	GCCGGC	1 cut(s)	1118
NlaIII	CATG	6 cut(s)	1429, 1454, 1538, 1583, 1712, 1886
NlaIV	GGNNCC	4 cut(s)	192, 558, 724, 803
NmeAIII	GCCGAG	5 cut(s)	242, 756, 993, 1268, 1465
NmuCI	GTSAC	2 cut(s)	1813, 1901
NruI	TCGCGA	1 cut(s)	848
NsiI	ATGCAT	3 cut(s)	103, 139, 1536
NspI	RCATGY	2 cut(s)	1454, 1538
NspV	TTCGAA	1 cut(s)	815
PagI	TCATGA	2 cut(s)	1425, 1882
PaqCI	CACCTGC	1 cut(s)	1027
PauI	GCGCGC	1 cut(s)	758
PcsI	WCGNNNNNNNCGW	1 cut(s)	789
PctI	GAATGC	3 cut(s)	137, 1536, 1611
PdiI	GCCGGC	1 cut(s)	1120
PdmI	GAANNNNTTC	1 cut(s)	1854
PfeI	GAWTC	4 cut(s)	119, 149, 973, 1000
PflFI	GACNNNGTC	1 cut(s)	644
PinAI	ACCGGT	1 cut(s)	196
PleI	GAGTC	5 cut(s)	325, 349, 473, 1820, 1905
PluTI	GGCGCC	1 cut(s)	726
PpsI	GAGTC	5 cut(s)	325, 349, 473, 1820, 1905
PsiI	TTATAA	1 cut(s)	1166
Psp6I	CCWGG	4 cut(s)	312, 908, 1264, 1596
PspFI	CCCAGC	1 cut(s)	797
PspGI	CCWGG	4 cut(s)	312, 908, 1264, 1596
PspN4I	GGNNCC	4 cut(s)	192, 558, 724, 803
PspPI	GGNCC	2 cut(s)	254, 1665
PsuI	RGATCY	1 cut(s)	1124
PsyI	GACNNNGTC	1 cut(s)	644
PteI	GCGCGC	1 cut(s)	758
PvuII	CAGCTG	1 cut(s)	766
RruI	TCGCGA	1 cut(s)	848
RsaI	GTAC	4 cut(s)	389, 956, 1523, 1624
RsaNI	GTAC	4 cut(s)	388, 955, 1522, 1623
RseI	CAYNNNNRTG	3 cut(s)	1529, 1584, 1599
SalI	GTCGAC	2 cut(s)	343, 782
SaqAI	TTAA	5 cut(s)	930, 1251, 1433, 1611, 1917
Sau3AI	GATC	6 cut(s)	843, 894, 1041, 1124, 1306, 1885
Sau96I	GGNCC	2 cut(s)	254, 1665
SchI	GAGTC	5 cut(s)	326, 350, 473, 1821, 1906
ScrFI	CCNGG	9 cut(s)	78, 314, 720, 806, 910, 1109, 1174, 1266, 1598
SduI	GDGCHC	1 cut(s)	422
SfaNI	GCATC	8 cut(s)	88, 110, 312, 461, 666, 690, 1105, 1810
SfcI	CTRYAG	1 cut(s)	1889
SfoI	GGCGCC	1 cut(s)	724
SfuI	TTCGAA	1 cut(s)	815
SgrAI	CRCCGGYG	1 cut(s)	196
SinI	GGWCC	2 cut(s)	254, 1665
SmiMI	CAYNNNNRTG	3 cut(s)	1529, 1584, 1599
SmlI	CTYRAG	2 cut(s)	1610, 1763
SmoI	CTYRAG	2 cut(s)	1610, 1763
Sse9I	AATT	9 cut(s)	509, 862, 1136, 1226, 1269, 1361, 1383, 1632, 1918
SspDI	GGCGCC	1 cut(s)	722
SspMI	CTAG	4 cut(s)	464, 1074, 1356, 1688
StyD4I	CCNGG	9 cut(s)	76, 312, 718, 804, 908, 1107, 1172, 1264, 1596
StyI	CCWWGG	3 cut(s)	738, 1441, 1687
TaaI	ACNGT	8 cut(s)	67, 349, 415, 881, 1204, 1216, 1771, 1907
TaiI	ACGT	4 cut(s)	331, 648, 1281, 1624
TaqI	TCGA	8 cut(s)	344, 351, 687, 750, 783, 792, 815, 1044
TaqII	GACCGA	1 cut(s)	242
TasI	AATT	9 cut(s)	509, 862, 1136, 1226, 1269, 1361, 1383, 1632, 1918
TatI	WGTACW	1 cut(s)	1521
TauI	GCSGC	5 cut(s)	23, 291, 303, 575, 812
TfiI	GAWTC	4 cut(s)	119, 149, 973, 1000
Tru1I	TTAA	5 cut(s)	930, 1251, 1433, 1611, 1917
Tru9I	TTAA	5 cut(s)	930, 1251, 1433, 1611, 1917
TscAI	CASTG	5 cut(s)	1207, 1301, 1531, 1675, 1822
TseFI	GTSAC	2 cut(s)	1813, 1901
TseI	GCWGC	5 cut(s)	218, 443, 490, 1540, 1723
Tsp45I	GTSAC	2 cut(s)	1813, 1901
TspDTI	ATGAA	8 cut(s)	965, 973, 992, 1398, 1596, 1644, 1863, 1871
TspRI	CASTG	5 cut(s)	1207, 1301, 1531, 1675, 1822
Tth111I	GACNNNGTC	1 cut(s)	644
Vha464I	CTTAAG	1 cut(s)	1610
VneI	GTGCAC	1 cut(s)	418
VpaK11BI	GGWCC	2 cut(s)	254, 1665
XapI	RAATTY	4 cut(s)	509, 862, 1136, 1226
XceI	RCATGY	2 cut(s)	1454, 1538
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1307, 1869
XmaJI	CCTAGG	1 cut(s)	1687
XmiI	GTMKAC	2 cut(s)	344, 783
XmnI	GAANNNNTTC	1 cut(s)	1854
XspI	CTAG	4 cut(s)	464, 1074, 1356, 1688
Zsp2I	ATGCAT	3 cut(s)	103, 139, 1536

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.