Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0003124

Physical Location & Seq

Genomic Coordinates Forward (+)

62497921 .. 62502087

Gene Structure 4167 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00127060.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1446 bp

ATGGCCACTTTGTCCACTCCCCACACAATCTCACCCGCTGCCATTGTTTCTTCTTCTCCAGTCAGATGCTCTCACTCCCAATCGCAGCTCCTATTCCGTTTAAATTTCCTGAACCACCGCCGCCACCACAGCCCGAACCTCCCGATTTCGGCTACCAATCTCCGCGCCGCTACCAAAGGACGAGTTCTCTGCTCGCAAAACCCTAACCCTACCCCCACGCGCCGCCCCGAATACGTCCCCAACCGCATCTCCGACCCGAACTATATCCGCATCTTCGACACCACGCTCCGCGACGGCGAGCAGGCCCCCGGCGCCTCGCTCACCTCCAAGGAGAAGCTCAACATTGCGCGCCAGCTGGCCAAGCTCGGAGTCGACATAATCGACGCCGGGTTCCCGGCTGCGTCGAAGGACGATTTCGTAGCAGTGAAGATGATCGCGAAAGAGGTCGGGAATTTCGTGGATAAAGACGGTTATGTCCCTGTGATCTGTGGGCTGTCCAGGTGCAATGAGAAGGATATTAAGACGGCGTGGGAGGCGGTCAAGTATGCAAAGAGGCCGAGGATTCATACTTTCATTGCTACCAGTCCGATTCATATGGAGCATAAGCTGAGGAAGACGAAGGAGCAGGTGATCGAAATGGCGAGGAGTATGGTGAGCTATGCTAGGAGCTTGGGTTGCCAAGATGTCCAGTTTAGCCCGGAAGATGCCGGCAGATCTGAGAAGGAATTTCTATATCAGATTTTAGGTGAAGTTATAAAGGCCGGGGCAACAACTCTGAACATTCCTGACACTGTGGGTTATAACGTGCCAACTGAATTTGGTCAGTTGATTGCTGACATTAAATCTAATACCCCTGGAATTGATGACGTTATCATCTCGGCTCACTGCCACAATGATCTTGGACTTTCTACCGCCAACACTTTAGCGGGGGCAAGTAGAGGTGCTAGGCAATTGGAAGTAACAATCAATGGAATTGGTGAAAGGGCTGGTAATGCTTCATTAGAGGAGGTTTCAGAGTACACTGGAATGCATGTGCAGCAACACAAGGCTATTGTTGGAGCTAATGCTTTTGCACATGAAAGTGGTATCCATCAGGATGGAATGCTCAAGGACAAACGTACATATGAAATTATATCTCCTGAAGATATTGGGTATGACCGGTCCAGTGAAGCTGCCATTGTCCTAGGGAAACTTAGTGGACGCCATGCTTTGAAAAATCAGCTTCAACAGCTTGGTTATGAGCTTGATGATGTTCAACTTGAGACTGTATTCTGGCGCTTCAAAGGAGTAGCTGAACAGAAAAAGAGAGTCACTGATGCAGACCTCAGAGCATTGGTGTCAGATGAAGTTTTTCAGCCAGAAGTTGTCTGGAAGCTTCATGATCTACAGGTGAGTCGTGACAGTTTCCAACTTTGTTGCTCATCTTTTGATCCGCTGAAATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003852 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006082 GO:0006520 GO:0006551 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009081 GO:0009082 GO:0009098 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009941 GO:0009987 GO:0016053 GO:0016740 GO:0016746 GO:0019752 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046912 GO:0071704 GO:1901564 GO:1901566 GO:1901576 GO:1901605 GO:1901607

KEGG Pathways

Metabolic & Signaling

ko00290 ko00620 ko01100 ko01110 ko01210 ko01230 map00290 map00620 map01100 map01110 map01210 map01230

Pfam Domains

Protein Families

HMGL-like LeuA_dimer

Protein Analysis

481

Amino Acids

53.16

Weight (kDa)

7.26

Isoelectric Point (pI)

43.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HMGL-like	PF00682	89 - 338	1.7e-85	HMGL-like
HCS_D2	PF22617	351 - 435	1.1e-28	Homocitrate synthase post-HMGL domain-like

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003124)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18500 AT1G74040 AT1G74040 AT1G74040
fragaria_vesca	FvH4_1g22410 FvH4_1g22460 FvH4_1g22570 FvH4_1g22570 FvH4_1g22570 FvH4_1g22570
malus_domestica	MD01G1019700.v1.1 MD15G1332600.v1.1
prunus_persica	Prupe.6G172500_v2.0.a1 Prupe.6G172500_v2.0.a1 Prupe.6G172500_v2.0.a1
pyrus_communis	pycom01g04920 pycom15g29280
rosa_chinensis	RchiOBHm_Chr2g0116551 RchiOBHm_Chr2g0116561
rosa_laevigata	RLG00000018287 RLG00000018288
rosa_multiflora	Rmu_sc0001287.1_g000019 Rmu_sc0004191.1_g000022 Rmu_sc0004191.1_g000030
rosa_roxburghii	Rroxscaffold_2G00127060 Rroxscaffold_2G00127070
rosa_rugosa	Rorug02G0207600
rosa_samantha	Rh2AG262500 Rh2AG262600 Rh2BG274100 Rh2BG274400 Rh2DG270700 Rh2DG270800 Rh2DG289200 Rh2DG289300
rosa_wichuraiana	Rw2G020670 Rw2G020680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	755, 801
AarI	CACCTGC	1 cut(s)	616
AasI	GACNNNNNNGTC	1 cut(s)	473
Acc36I	ACCTGC	1 cut(s)	616
AccB1I	GGYRCC	1 cut(s)	311
AccI	GTMKAC	1 cut(s)	372
AccII	CGCG	5 cut(s)	165, 220, 291, 349, 437
AclWI	GGATC	1 cut(s)	1424
AcoI	YGGCCR	2 cut(s)	3, 357
AcsI	RAATTY	5 cut(s)	103, 451, 725, 815, 1439
AcuI	CTGAAG	1 cut(s)	1161
AcyI	GRCGYC	3 cut(s)	312, 384, 1201
AfaI	GTAC	2 cut(s)	1019, 1120
AfiI	CCNNNNNNNGG	1 cut(s)	148
AgeI	ACCGGT	1 cut(s)	1158
AgsI	TTSAA	4 cut(s)	1213, 1226, 1256, 1282
AjnI	CCWGG	2 cut(s)	497, 853
Alw26I	GTCTC	1 cut(s)	1256
AlwI	GGATC	1 cut(s)	1424
AoxI	GGCC	5 cut(s)	3, 303, 357, 554, 759
ApeKI	GCWGC	5 cut(s)	38, 85, 398, 1036, 1172
ApoI	RAATTY	5 cut(s)	103, 451, 725, 815, 1439
AsiGI	ACCGGT	1 cut(s)	1158
Asp700I	GAANNNNTTC	1 cut(s)	1350
AspA2I	CCTAGG	1 cut(s)	1183
AspLEI	GCGC	6 cut(s)	167, 222, 314, 349, 351, 1278
AspS9I	GGNCC	2 cut(s)	304, 1161
AsuC2I	CCSGG	5 cut(s)	309, 388, 395, 698, 763
AsuHPI	GGTGA	7 cut(s)	24, 313, 640, 664, 758, 989, 1402
AvaII	GGWCC	1 cut(s)	1161
AvrII	CCTAGG	1 cut(s)	1183
BalI	TGGCCA	2 cut(s)	5, 359
BanI	GGYRCC	1 cut(s)	311
BbsI	GAAGAC	1 cut(s)	620
BbvCI	CCTCAGC	1 cut(s)	608
BbvI	GCAGC	5 cut(s)	25, 97, 385, 1048, 1159
BccI	CCATC	2 cut(s)	1091, 1098
BceAI	ACGGC	2 cut(s)	310, 540
BcgI	CGANNNNNNTGC	2 cut(s)	171, 205
BciT130I	CCWGG	2 cut(s)	499, 855
BciVI	GTATCC	1 cut(s)	1097
BcnI	CCSGG	5 cut(s)	309, 388, 395, 698, 763
BcoDI	GTCTC	1 cut(s)	1256
BfaI	CTAG	3 cut(s)	663, 945, 1184
BfmI	CTRYAG	1 cut(s)	1385
BfoI	RGCGCY	2 cut(s)	315, 1279
BfuAI	ACCTGC	1 cut(s)	616
BfuI	GTATCC	1 cut(s)	1097
BglII	AGATCT	1 cut(s)	713
BisI	GCNGC	8 cut(s)	39, 86, 121, 168, 223, 399, 1037, 1173
BlnI	CCTAGG	1 cut(s)	1183
BlsI	GCNGC	8 cut(s)	40, 87, 122, 169, 224, 400, 1038, 1174
Bme1390I	CCNGG	7 cut(s)	309, 388, 395, 499, 698, 763, 855
Bme18I	GGWCC	1 cut(s)	1161
BmgT120I	GGNCC	2 cut(s)	304, 1161
BmiI	GGNNCC	3 cut(s)	306, 313, 392
BmrFI	CCNGG	7 cut(s)	309, 388, 395, 499, 698, 763, 855
BmsI	GCATC	5 cut(s)	56, 255, 279, 694, 1306
BpiI	GAAGAC	1 cut(s)	620
BpmI	CTGGAG	1 cut(s)	42
Bpu10I	CCTNAGC	1 cut(s)	608
BpuEI	CTTGAG	2 cut(s)	1091, 1280
BpuMI	CCSGG	5 cut(s)	309, 388, 395, 698, 763
BsaHI	GRCGYC	3 cut(s)	312, 384, 1201
BsaJI	CCNNGG	6 cut(s)	307, 327, 557, 762, 853, 1183
BsaWI	WCCGGW	1 cut(s)	1158
BsaXI	ACNNNNNCTCC	4 cut(s)	233, 263, 658, 688
Bsc4I	CCNNNNNNNGG	1 cut(s)	148
Bse118I	RCCGGY	2 cut(s)	707, 1158
Bse1I	ACTGG	5 cut(s)	59, 582, 688, 1027, 1164
Bse3DI	GCAATG	3 cut(s)	342, 511, 573
BseBI	CCWGG	2 cut(s)	499, 855
BseDI	CCNNGG	6 cut(s)	307, 327, 557, 762, 853, 1183
BseGI	GGATG	1 cut(s)	1102
BseLI	CCNNNNNNNGG	1 cut(s)	148
BseMI	GCAATG	3 cut(s)	342, 511, 573
BseMII	CTCAG	3 cut(s)	599, 708, 1339
BseNI	ACTGG	5 cut(s)	59, 582, 688, 1027, 1164
BsePI	GCGCGC	1 cut(s)	347
BseRI	GAGGAG	2 cut(s)	658, 1019
BseXI	GCAGC	5 cut(s)	25, 97, 385, 1048, 1159
BsgI	GTGCAG	1 cut(s)	1055
Bsh1236I	CGCG	5 cut(s)	165, 220, 291, 349, 437
BshFI	GGCC	5 cut(s)	5, 305, 359, 556, 761
BshNI	GGYRCC	1 cut(s)	311
BshTI	ACCGGT	1 cut(s)	1158
BsiSI	CCGG	7 cut(s)	309, 387, 395, 698, 708, 762, 1159
BslFI	GGGAC	2 cut(s)	221, 461
BslI	CCNNNNNNNGG	1 cut(s)	148
BsmAI	GTCTC	1 cut(s)	1256
BsmFI	GGGAC	2 cut(s)	221, 461
BsmI	GAATGC	2 cut(s)	1032, 1107
BsnI	GGCC	5 cut(s)	5, 305, 359, 556, 761
Bsp143I	GATC	7 cut(s)	432, 483, 630, 713, 895, 1381, 1429
Bsp68I	TCGCGA	1 cut(s)	437
BspANI	GGCC	5 cut(s)	5, 305, 359, 556, 761
BspCNI	CTCAG	3 cut(s)	600, 709, 1338
BspFNI	CGCG	5 cut(s)	165, 220, 291, 349, 437
BspHI	TCATGA	1 cut(s)	1378
BspLI	GGNNCC	3 cut(s)	306, 313, 392
BspMI	ACCTGC	1 cut(s)	616
BspPI	GGATC	1 cut(s)	1424
BspT107I	GGYRCC	1 cut(s)	311
BsrDI	GCAATG	3 cut(s)	342, 511, 573
BsrFI	RCCGGY	2 cut(s)	707, 1158
BsrI	ACTGG	5 cut(s)	59, 582, 688, 1027, 1164
BssAI	RCCGGY	2 cut(s)	707, 1158
BssECI	CCNNGG	6 cut(s)	307, 327, 557, 762, 853, 1183
BssHII	GCGCGC	1 cut(s)	347
BssMI	GATC	7 cut(s)	432, 483, 630, 713, 895, 1381, 1429
BssNI	GRCGYC	3 cut(s)	312, 384, 1201
BssT1I	CCWWGG	2 cut(s)	327, 1183
Bst2UI	CCWGG	2 cut(s)	499, 855
Bst4CI	ACNGT	4 cut(s)	470, 793, 1267, 1403
BstACI	GRCGYC	3 cut(s)	312, 384, 1201
BstC8I	GCNNGC	7 cut(s)	194, 299, 303, 349, 353, 357, 709
BstDEI	CTNAG	4 cut(s)	608, 717, 1193, 1325
BstF5I	GGATG	1 cut(s)	1102
BstFNI	CGCG	5 cut(s)	165, 220, 291, 349, 437
BstH2I	RGCGCY	2 cut(s)	315, 1279
BstHHI	GCGC	6 cut(s)	167, 222, 314, 349, 351, 1278
BstKTI	GATC	7 cut(s)	435, 486, 633, 716, 898, 1384, 1432
BstMAI	GTCTC	1 cut(s)	1256
BstMBI	GATC	7 cut(s)	432, 483, 630, 713, 895, 1381, 1429
BstMWI	GCNNNNNNNGC	8 cut(s)	129, 311, 361, 533, 675, 992, 1036, 1228
BstNI	CCWGG	2 cut(s)	499, 855
BstNSI	RCATGY	1 cut(s)	1034
BstSCI	CCNGG	7 cut(s)	307, 386, 393, 497, 696, 761, 853
BstSFI	CTRYAG	1 cut(s)	1385
BstUI	CGCG	5 cut(s)	165, 220, 291, 349, 437
BstV1I	GCAGC	5 cut(s)	25, 97, 385, 1048, 1159
BstV2I	GAAGAC	1 cut(s)	620
BstX2I	RGATCY	1 cut(s)	713
BstXI	CCANNNNNNTGG	1 cut(s)	1097
BstYI	RGATCY	1 cut(s)	713
BsuI	GTATCC	1 cut(s)	1097
BsuRI	GGCC	5 cut(s)	5, 305, 359, 556, 761
BtsCI	GGATG	1 cut(s)	1102
BtsI	GCAGTG	2 cut(s)	429, 883
BtsIMutI	CAGTG	6 cut(s)	429, 789, 883, 1020, 1171, 1311
BtuMI	TCGCGA	1 cut(s)	437
BveI	ACCTGC	1 cut(s)	616
Cac8I	GCNNGC	7 cut(s)	194, 299, 303, 349, 353, 357, 709
CciI	TCATGA	1 cut(s)	1378
CfoI	GCGC	6 cut(s)	167, 222, 314, 349, 351, 1278
Cfr10I	RCCGGY	2 cut(s)	707, 1158
Cfr13I	GGNCC	2 cut(s)	304, 1161
CseI	GACGC	3 cut(s)	390, 392, 1209
Csp6I	GTAC	2 cut(s)	1018, 1119
CspAI	ACCGGT	1 cut(s)	1158
CviAII	CATG	4 cut(s)	1031, 1076, 1205, 1379
CviQI	GTAC	2 cut(s)	1018, 1119
DdeI	CTNAG	4 cut(s)	608, 717, 1193, 1325
DinI	GGCGCC	1 cut(s)	313
DpnI	GATC	7 cut(s)	434, 485, 632, 715, 897, 1383, 1431
DpnII	GATC	7 cut(s)	432, 483, 630, 713, 895, 1381, 1429
DraI	TTTAAA	1 cut(s)	102
DrdI	GACNNNNNNGTC	1 cut(s)	473
DseDI	GACNNNNNNGTC	1 cut(s)	473
EaeI	YGGCCR	2 cut(s)	3, 357
Eco130I	CCWWGG	2 cut(s)	327, 1183
Eco47I	GGWCC	1 cut(s)	1161
Eco57I	CTGAAG	1 cut(s)	1161
EcoO109I	RGGNCCY	1 cut(s)	304
EcoRII	CCWGG	2 cut(s)	497, 853
EcoT14I	CCWWGG	2 cut(s)	327, 1183
EcoT22I	ATGCAT	1 cut(s)	1032
EgeI	GGCGCC	1 cut(s)	313
EheI	GGCGCC	1 cut(s)	313
ErhI	CCWWGG	2 cut(s)	327, 1183
FaeI	CATG	4 cut(s)	1034, 1079, 1208, 1382
FaqI	GGGAC	2 cut(s)	221, 461
FatI	CATG	4 cut(s)	1030, 1075, 1204, 1378
FauI	CCCGC	2 cut(s)	43, 919
FauNDI	CATATG	2 cut(s)	594, 1123
FblI	GTMKAC	1 cut(s)	372
Fnu4HI	GCNGC	8 cut(s)	39, 86, 121, 168, 223, 399, 1037, 1173
FokI	GGATG	1 cut(s)	1109
Fsp4HI	GCNGC	8 cut(s)	39, 86, 121, 168, 223, 399, 1037, 1173
FspBI	CTAG	3 cut(s)	663, 945, 1184
GlaI	GCGC	6 cut(s)	166, 221, 313, 348, 350, 1277
GluI	GCNGC	8 cut(s)	39, 86, 121, 168, 223, 399, 1037, 1173
GsuI	CTGGAG	1 cut(s)	42
HaeII	RGCGCY	2 cut(s)	315, 1279
HaeIII	GGCC	5 cut(s)	5, 305, 359, 556, 761
HapII	CCGG	7 cut(s)	309, 387, 395, 698, 708, 762, 1159
HgaI	GACGC	3 cut(s)	390, 392, 1209
HhaI	GCGC	6 cut(s)	167, 222, 314, 349, 351, 1278
Hin1I	GRCGYC	3 cut(s)	312, 384, 1201
Hin1II	CATG	4 cut(s)	1034, 1079, 1208, 1382
Hin6I	GCGC	6 cut(s)	165, 220, 312, 347, 349, 1276
HinP1I	GCGC	6 cut(s)	165, 220, 312, 347, 349, 1276
HincII	GTYRAC	1 cut(s)	373
HindII	GTYRAC	1 cut(s)	373
HindIII	AAGCTT	1 cut(s)	1373
HinfI	GANTC	5 cut(s)	369, 562, 589, 1308, 1393
HpaII	CCGG	7 cut(s)	309, 387, 395, 698, 708, 762, 1159
HphI	GGTGA	7 cut(s)	24, 313, 640, 664, 758, 989, 1402
Hpy166II	GTNNAC	4 cut(s)	15, 373, 1020, 1199
Hpy8I	GTNNAC	4 cut(s)	15, 373, 1020, 1199
Hpy99I	CGWCG	3 cut(s)	296, 386, 406
HpyAV	CCTTC	4 cut(s)	400, 505, 613, 715
HpyCH4III	ACNGT	4 cut(s)	470, 793, 1267, 1403
HpyCH4IV	ACGT	4 cut(s)	234, 804, 867, 1117
HpyCH4V	TGCA	6 cut(s)	504, 548, 1030, 1036, 1073, 1319
HpyF10VI	GCNNNNNNNGC	8 cut(s)	129, 311, 361, 533, 675, 992, 1036, 1228
HpyF3I	CTNAG	4 cut(s)	608, 717, 1193, 1325
HpySE526I	ACGT	4 cut(s)	234, 804, 867, 1117
Hsp92I	GRCGYC	3 cut(s)	312, 384, 1201
Hsp92II	CATG	4 cut(s)	1034, 1079, 1208, 1382
HspAI	GCGC	6 cut(s)	165, 220, 312, 347, 349, 1276
KasI	GGCGCC	1 cut(s)	311
KroI	GCCGGC	1 cut(s)	707
KroNI	GCCGGC	1 cut(s)	709
Kzo9I	GATC	7 cut(s)	432, 483, 630, 713, 895, 1381, 1429
LmnI	GCTCC	6 cut(s)	93, 291, 598, 622, 666, 1058
Lsp1109I	GCAGC	5 cut(s)	25, 97, 385, 1048, 1159
LweI	GCATC	5 cut(s)	56, 255, 279, 694, 1306
MaeI	CTAG	3 cut(s)	663, 945, 1184
MaeII	ACGT	4 cut(s)	234, 804, 867, 1117
MaeIII	GTNAC	3 cut(s)	958, 1309, 1397
MalI	GATC	7 cut(s)	434, 485, 632, 715, 897, 1383, 1431
MboI	GATC	7 cut(s)	432, 483, 630, 713, 895, 1381, 1429
MboII	GAAGA	7 cut(s)	42, 45, 265, 439, 625, 713, 1154
MfeI	CAATTG	1 cut(s)	950
MflI	RGATCY	1 cut(s)	713
MlsI	TGGCCA	2 cut(s)	5, 359
MluCI	AATT	9 cut(s)	103, 451, 725, 815, 858, 950, 972, 1128, 1439
MluNI	TGGCCA	2 cut(s)	5, 359
Mly113I	GGCGCC	1 cut(s)	312
MlyI	GAGTC	3 cut(s)	378, 1317, 1402
MmeI	TCCRAC	3 cut(s)	276, 1036, 1432
Mox20I	TGGCCA	2 cut(s)	5, 359
Mph1103I	ATGCAT	1 cut(s)	1032
MroNI	GCCGGC	1 cut(s)	707
MroXI	GAANNNNTTC	1 cut(s)	1350
MscI	TGGCCA	2 cut(s)	5, 359
MseI	TTAA	4 cut(s)	101, 519, 840, 1444
MslI	CAYNNNNRTG	3 cut(s)	1025, 1080, 1095
Msp20I	TGGCCA	2 cut(s)	5, 359
MspA1I	CMGCKG	3 cut(s)	38, 355, 1435
MspI	CCGG	7 cut(s)	309, 387, 395, 698, 708, 762, 1159
MspR9I	CCNGG	7 cut(s)	309, 388, 395, 499, 698, 763, 855
MunI	CAATTG	1 cut(s)	950
Mva1269I	GAATGC	2 cut(s)	1032, 1107
MvaI	CCWGG	2 cut(s)	499, 855
MvnI	CGCG	5 cut(s)	165, 220, 291, 349, 437
MwoI	GCNNNNNNNGC	8 cut(s)	129, 311, 361, 533, 675, 992, 1036, 1228
NaeI	GCCGGC	1 cut(s)	709
NarI	GGCGCC	1 cut(s)	312
NciI	CCSGG	5 cut(s)	309, 388, 395, 698, 763
NdeI	CATATG	2 cut(s)	594, 1123
NdeII	GATC	7 cut(s)	432, 483, 630, 713, 895, 1381, 1429
NgoMIV	GCCGGC	1 cut(s)	707
NlaIII	CATG	4 cut(s)	1034, 1079, 1208, 1382
NlaIV	GGNNCC	3 cut(s)	306, 313, 392
NmeAIII	GCCGAG	2 cut(s)	582, 857
NmuCI	GTSAC	2 cut(s)	1309, 1397
NruI	TCGCGA	1 cut(s)	437
NsiI	ATGCAT	1 cut(s)	1032
NspI	RCATGY	1 cut(s)	1034
PagI	TCATGA	1 cut(s)	1378
PaqCI	CACCTGC	1 cut(s)	616
PauI	GCGCGC	1 cut(s)	347
PcsI	WCGNNNNNNNCGW	2 cut(s)	378, 453
PctI	GAATGC	2 cut(s)	1032, 1107
PdiI	GCCGGC	1 cut(s)	709
PdmI	GAANNNNTTC	1 cut(s)	1350
PfeI	GAWTC	2 cut(s)	562, 589
PinAI	ACCGGT	1 cut(s)	1158
PkrI	GCNGC	8 cut(s)	40, 87, 122, 169, 224, 400, 1038, 1174
PleI	GAGTC	3 cut(s)	377, 1316, 1401
PluTI	GGCGCC	1 cut(s)	315
PpsI	GAGTC	3 cut(s)	377, 1316, 1401
PsiI	TTATAA	2 cut(s)	755, 801
Psp6I	CCWGG	2 cut(s)	497, 853
PspGI	CCWGG	2 cut(s)	497, 853
PspN4I	GGNNCC	3 cut(s)	306, 313, 392
PspPI	GGNCC	2 cut(s)	304, 1161
PsuI	RGATCY	1 cut(s)	713
PteI	GCGCGC	1 cut(s)	347
PvuII	CAGCTG	1 cut(s)	355
RruI	TCGCGA	1 cut(s)	437
RsaI	GTAC	2 cut(s)	1019, 1120
RsaNI	GTAC	2 cut(s)	1018, 1119
RseI	CAYNNNNRTG	3 cut(s)	1025, 1080, 1095
SalI	GTCGAC	1 cut(s)	371
SaqAI	TTAA	4 cut(s)	101, 519, 840, 1444
SatI	GCNGC	8 cut(s)	39, 86, 121, 168, 223, 399, 1037, 1173
Sau3AI	GATC	7 cut(s)	432, 483, 630, 713, 895, 1381, 1429
Sau96I	GGNCC	2 cut(s)	304, 1161
SchI	GAGTC	3 cut(s)	378, 1317, 1402
ScrFI	CCNGG	7 cut(s)	309, 388, 395, 499, 698, 763, 855
SfaNI	GCATC	5 cut(s)	56, 255, 279, 694, 1306
SfcI	CTRYAG	1 cut(s)	1385
SfoI	GGCGCC	1 cut(s)	313
SinI	GGWCC	1 cut(s)	1161
SmiMI	CAYNNNNRTG	3 cut(s)	1025, 1080, 1095
SmlI	CTYRAG	2 cut(s)	1106, 1259
SmoI	CTYRAG	2 cut(s)	1106, 1259
Sse9I	AATT	9 cut(s)	103, 451, 725, 815, 858, 950, 972, 1128, 1439
SspDI	GGCGCC	1 cut(s)	311
SspMI	CTAG	3 cut(s)	663, 945, 1184
StyD4I	CCNGG	7 cut(s)	307, 386, 393, 497, 696, 761, 853
StyI	CCWWGG	2 cut(s)	327, 1183
TaaI	ACNGT	4 cut(s)	470, 793, 1267, 1403
TaiI	ACGT	4 cut(s)	237, 807, 870, 1120
TaqI	TCGA	5 cut(s)	276, 372, 381, 404, 633
TasI	AATT	9 cut(s)	103, 451, 725, 815, 858, 950, 972, 1128, 1439
TatI	WGTACW	1 cut(s)	1017
TauI	GCSGC	3 cut(s)	123, 170, 225
TfiI	GAWTC	2 cut(s)	562, 589
Tru1I	TTAA	4 cut(s)	101, 519, 840, 1444
Tru9I	TTAA	4 cut(s)	101, 519, 840, 1444
TscAI	CASTG	6 cut(s)	429, 796, 890, 1027, 1171, 1318
TseFI	GTSAC	2 cut(s)	1309, 1397
TseI	GCWGC	5 cut(s)	38, 85, 398, 1036, 1172
Tsp45I	GTSAC	2 cut(s)	1309, 1397
TspDTI	ATGAA	8 cut(s)	554, 562, 581, 987, 1092, 1140, 1359, 1367
TspGWI	ACGGA	1 cut(s)	86
TspRI	CASTG	6 cut(s)	429, 796, 890, 1027, 1171, 1318
VpaK11BI	GGWCC	1 cut(s)	1161
XapI	RAATTY	5 cut(s)	103, 451, 725, 815, 1439
XceI	RCATGY	1 cut(s)	1034
XcmI	CCANNNNNNNNNTGG	2 cut(s)	896, 1365
XmaJI	CCTAGG	1 cut(s)	1183
XmiI	GTMKAC	1 cut(s)	372
XmnI	GAANNNNTTC	1 cut(s)	1350
XspI	CTAG	3 cut(s)	663, 945, 1184
Zsp2I	ATGCAT	1 cut(s)	1032

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.