FvH4_1g26400

NYN domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0011904
Physical Location & Seq
Reverse (-)
18263905 .. 18267826
3922 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g26400.t2

Sequence Viewer

Length: 1980 bp
ATGCGGGGAGATGTGAACGGAGGGACGGCGAACATGGCGGAGAAGCAGTACGTGACGGCGAAGACGTCGGTGTGGTGGGACATAGAGAATTGCCAGGTGCCCAAGGTCTGCGACGTCCACGCCATCGCTCAGAATATAAGCTCGGCGCTGGTGGAGATGAACTACTGCGGCCCCGTCTCCATCTCCGCCTACGGCGACACCAATCGCATCCCCGCGTCTGTCCAGCACGCGCTCTCCAGCACCGGCATCGCCCTCAATCACGTCCCCGCCGGTGTGAAAGATGCAAGTGACAAGAAGATTCTTGTTGATATGCTATTCTGGGCAGTAGACAACCCTGCCCCGGCCAATTATCTGCTTATCTCCGGCGACAGGGACTTCTCTAATGCTCTGCATCAGCTACGAATGAGAAGATATAATATTCTTCTCGCGCAGCCACATAAAGCATCTGCACCACTCATTGCCGCGGCAAAGAGTGTGTGGCTTTGGACTAGCCTCTCAGCCGGAGGCCCCCCACTTACGACTGGTGAATCGTCTCAGCTTGCTAATGGTAGCACCAGTTCTTTTAACCCAGAACTGCCGCCGCAGCACTCGATGCCTGAAGATCATCAGATAAACAACCAACCGACACTTAACTTTGACAATCAAGCTCCGGGAAATCAGAAGCCTTCTAATGGTGGAAGGGGTGGTGGTGATCCTAGATTTAAAGGGAAGCATAACAGGAAAAACCCAAATAAACCCAACATATCAAGAGCCTCAAGTGTGCCAGTTGGGGTCCAAAATGACAAGAGTAGTGATTATCCTTACCAAACAGATCAGACACAGGCAAAGCAGTTTAAGAAAGCTCCACATGAATTCTTTGGTGCTAGTGAGAATTTTGTCTCCACTAGCAGGTCTACGCCCAATTTCTTCCCTGGAAATTCTGTCCCTTCCGGAAGTAATGGAAGTAGTTTTCTAGGTCAGCAAAACCAATATCCTCCTCAAATGAGGCCGAACAACTTCCATATGCAACCTAATTTTGGTCCGGATAATATGCTCCCTCCGATTTCTCATGCTCAGGGTTTTCGACCTATTCCTCCCGGACCTGATGACCCTCGATTTTCTTTTGCTCCAATTTCTTCAGCTCCACCTACAAATGTTCCACCTTCAAATGTGCCTGACATGGGAAAGCTAAATATCTCTGATTACCCCAACTATGCACAAAATCCACCCAGGTTTCCACATCGAACCGGAGAAGAGTATAATAGACCTAGGTCTAGTGAGTCACAGAATCCTGGCGGCTTTAATGGACCTCATAGAGGCCATAATATGCAGGGTGGCCAGCCATTTCATCATGATTCTGTGAACAACAGGTATGTACCTCCTTCATCCACCCCTGTTACAGCAAACAACATTCCCACTACCAGTAATGGTAGCTGGGGAAGTCAAGGTTGTGCTCCACCTTCTGAATATGTTCAAGGGCTTATTGGCGTTATTCTCCTAGCCTTGAACACCCTGAAAGTAGAGAAAATTATGCCTACTGAAGCAAACATTACGGATTGCATCCGTTTTGGTGATCCAAAACACCGAAATACCGATGTAAGGAAGGCTTTGGATTATGCAATAGAGCAACATATGGTAGTGAAGCAGAACCTGGGTAACATTCCATTGTATATTGGAAAAAATAAAAAAGTATGGAAGTGTGTGAATCTTAGTGGTGGTAATATTAATCAGCACACTAAAGCTACATGGGATTCTATACAGAAATATCTGAGTTCATCAGATGGACGATCAGCACTGATGGCTTCTCAATGCAGATATGAAGCAGCTACAATTATGAAAAAAGCATGCTTGCAAGAGCTTGCTTTGGGTGAAGTACTCAAGATCTTGAATATGACAATTATTACGAAGAAATGGATCATTACTCATCAGTCAGGATGGCAACCAATTTCTATTACTCTTCCAGAGGCTAAACCTGATGTGGCTTCCGAACCTGGTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NYN OHA

Protein Analysis

660

Amino Acids

71.81

Weight (kDa)

9.08

Isoelectric Point (pI)

43.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NYN PF01936 1 - 54 2.2e-08 NYN domain
DUF7625 PF24620 371 - 464 3.5e-47 Domain of unknown function (DUF7625)
OHA PF14418 492 - 542 1.3e-09 OST-HTH Associated domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011904)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62200
fragaria_vesca FvH4_1g26400 FvH4_1g26400 FvH4_1g26400
malus_domestica MD09G1292400.v1.1 MD17G1283700.v1.1
prunus_persica Prupe.3G003800_v2.0.a1
pyrus_communis pycom09g19710 pycom17g27960
rosa_chinensis RchiOBHm_Chr3g0486181
rosa_laevigata RLG00000023095
rosa_multiflora Rmu_sc0000372.1_g000001
rosa_roxburghii Rroxscaffold_6G00396010
rosa_rugosa Rorug03G0223900
rosa_samantha Rh3AG273800 Rh3BG309100 Rh3CG307300 Rh3DG303700
rosa_wichuraiana Rw3G024260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 68, 117
Acc36I ACCTGC 1 cut(s) 879
AccB1I GGYRCC 1 cut(s) 97
AccI GTMKAC 2 cut(s) 327, 893
AccII CGCG 4 cut(s) 215, 230, 428, 464
AccIII TCCGGA 2 cut(s) 929, 1021
AclWI GGATC 3 cut(s) 686, 1547, 1901
AcoI YGGCCR 2 cut(s) 342, 1315
AcsI RAATTY 3 cut(s) 851, 871, 916
AcuI CTGAAG 3 cut(s) 618, 1101, 1539
AcyI GRCGYC 2 cut(s) 65, 114
AfaI GTAC 4 cut(s) 50, 1356, 1854, 1975
AfiI CCNNNNNNNGG 8 cut(s) 340, 369, 671, 888, 1016, 1160, 1295, 1578
AgsI TTSAA 4 cut(s) 1146, 1454, 1486, 1867
AjiI CACGTC 1 cut(s) 262
AjnI CCWGG 6 cut(s) 93, 910, 1208, 1270, 1629, 1969
Alw21I GWGCWC 1 cut(s) 1435
Alw26I GTCTC 3 cut(s) 181, 537, 883
AlwI GGATC 3 cut(s) 686, 1547, 1901
AlwNI CAGNNNCTG 1 cut(s) 1630
Aor13HI TCCGGA 2 cut(s) 929, 1021
AoxI GGCC 6 cut(s) 169, 342, 505, 986, 1297, 1315
ApeKI GCWGC 3 cut(s) 430, 583, 1802
ApoI RAATTY 3 cut(s) 851, 871, 916
AseI ATTAAT 1 cut(s) 1704
Asp700I GAANNNNTTC 2 cut(s) 995, 1449
AspA2I CCTAGG 1 cut(s) 1247
AspLEI GCGC 3 cut(s) 148, 232, 430
AspS9I GGNCC 6 cut(s) 170, 506, 772, 1019, 1079, 1286
AsuC2I CCSGG 3 cut(s) 341, 651, 1077
AsuHPI GGTGA 4 cut(s) 536, 701, 1562, 1859
AvaII GGWCC 4 cut(s) 772, 1019, 1079, 1286
AvrII CCTAGG 1 cut(s) 1247
BaeGI GKGCMC 1 cut(s) 102
BalI TGGCCA 1 cut(s) 1317
BanI GGYRCC 1 cut(s) 97
BbsI GAAGAC 1 cut(s) 68
Bbv12I GWGCWC 1 cut(s) 1435
BbvI GCAGC 3 cut(s) 442, 595, 1814
BccI CCATC 5 cut(s) 131, 188, 1754, 1771, 1908
BceAI ACGGC 3 cut(s) 42, 72, 208
BcgI CGANNNNNNTGC 2 cut(s) 229, 263
BciT130I CCWGG 6 cut(s) 95, 912, 1210, 1272, 1631, 1971
BcnI CCSGG 3 cut(s) 341, 651, 1077
BcoDI GTCTC 3 cut(s) 181, 537, 883
BfaI CTAG 8 cut(s) 489, 696, 864, 885, 953, 1248, 1254, 1478
BfoI RGCGCY 1 cut(s) 149
BfuAI ACCTGC 1 cut(s) 879
BglII AGATCT 1 cut(s) 1860
BisI GCNGC 9 cut(s) 169, 431, 462, 465, 578, 581, 584, 1276, 1803
BlnI CCTAGG 1 cut(s) 1247
BlsI GCNGC 9 cut(s) 170, 432, 463, 466, 579, 582, 585, 1277, 1804
BmcAI AGTACT 1 cut(s) 1854
Bme1390I CCNGG 9 cut(s) 95, 341, 651, 912, 1077, 1210, 1272, 1631, 1971
Bme18I GGWCC 4 cut(s) 772, 1019, 1079, 1286
BmgBI CACGTC 1 cut(s) 262
BmgT120I GGNCC 6 cut(s) 170, 506, 772, 1019, 1079, 1286
BmiI GGNNCC 4 cut(s) 99, 172, 508, 773
BmrFI CCNGG 9 cut(s) 95, 341, 651, 912, 1077, 1210, 1272, 1631, 1971
BmsI GCATC 7 cut(s) 216, 255, 271, 400, 452, 582, 1548
BoxI GACNNNNGTC 1 cut(s) 1249
BpiI GAAGAC 1 cut(s) 68
BpmI CTGGAG 1 cut(s) 220
Bpu10I CCTNAGC 1 cut(s) 1053
BpuEI CTTGAG 2 cut(s) 739, 1841
BpuMI CCSGG 3 cut(s) 341, 651, 1077
BsaAI YACGTR 1 cut(s) 52
BsaHI GRCGYC 2 cut(s) 65, 114
BsaJI CCNNGG 7 cut(s) 102, 339, 462, 910, 1208, 1247, 1630
BsaWI WCCGGW 3 cut(s) 929, 1021, 1226
BsaXI ACNNNNNCTCC 4 cut(s) 32, 62, 218, 248
Bsc4I CCNNNNNNNGG 8 cut(s) 340, 369, 671, 888, 1016, 1160, 1295, 1578
Bse118I RCCGGY 2 cut(s) 242, 269
Bse1I ACTGG 4 cut(s) 526, 555, 764, 1401
Bse3DI GCAATG 1 cut(s) 456
BseAI TCCGGA 2 cut(s) 929, 1021
BseBI CCWGG 6 cut(s) 95, 912, 1210, 1272, 1631, 1971
BseDI CCNNGG 7 cut(s) 102, 339, 462, 910, 1208, 1247, 1630
BseGI GGATG 4 cut(s) 207, 1364, 1539, 1919
BseLI CCNNNNNNNGG 8 cut(s) 340, 369, 671, 888, 1016, 1160, 1295, 1578
BseMI GCAATG 1 cut(s) 456
BseMII CTCAG 5 cut(s) 143, 510, 548, 1067, 1739
BseNI ACTGG 4 cut(s) 526, 555, 764, 1401
BseRI GAGGAG 1 cut(s) 966
BseSI GKGCMC 1 cut(s) 102
BseXI GCAGC 3 cut(s) 442, 595, 1814
BseYI CCCAGC 1 cut(s) 1413
BsgI GTGCAG 1 cut(s) 432
Bsh1236I CGCG 4 cut(s) 215, 230, 428, 464
BshFI GGCC 6 cut(s) 171, 344, 507, 988, 1299, 1317
BshNI GGYRCC 1 cut(s) 97
BsiHKAI GWGCWC 1 cut(s) 1435
BslFI GGGAC 5 cut(s) 37, 92, 248, 386, 908
BslI CCNNNNNNNGG 8 cut(s) 340, 369, 671, 888, 1016, 1160, 1295, 1578
BsmAI GTCTC 3 cut(s) 181, 537, 883
BsmBI CGTCTC 2 cut(s) 181, 537
BsmFI GGGAC 5 cut(s) 37, 92, 248, 386, 908
BsnI GGCC 6 cut(s) 171, 344, 507, 988, 1299, 1317
Bsp1286I GDGCHC 2 cut(s) 102, 1435
Bsp13I TCCGGA 2 cut(s) 929, 1021
Bsp143I GATC 7 cut(s) 601, 691, 811, 1552, 1766, 1860, 1893
BspANI GGCC 6 cut(s) 171, 344, 507, 988, 1299, 1317
BspCNI CTCAG 5 cut(s) 142, 509, 547, 1066, 1740
BspEI TCCGGA 2 cut(s) 929, 1021
BspFNI CGCG 4 cut(s) 215, 230, 428, 464
BspHI TCATGA 1 cut(s) 1330
BspLI GGNNCC 4 cut(s) 99, 172, 508, 773
BspMI ACCTGC 1 cut(s) 879
BspPI GGATC 3 cut(s) 686, 1547, 1901
BspT107I GGYRCC 1 cut(s) 97
BsrDI GCAATG 1 cut(s) 456
BsrFI RCCGGY 2 cut(s) 242, 269
BsrI ACTGG 4 cut(s) 526, 555, 764, 1401
BssAI RCCGGY 2 cut(s) 242, 269
BssECI CCNNGG 7 cut(s) 102, 339, 462, 910, 1208, 1247, 1630
BssMI GATC 7 cut(s) 601, 691, 811, 1552, 1766, 1860, 1893
BssNI GRCGYC 2 cut(s) 65, 114
BssT1I CCWWGG 2 cut(s) 102, 1247
Bst2UI CCWGG 6 cut(s) 95, 912, 1210, 1272, 1631, 1971
Bst6I CTCTTC 2 cut(s) 1227, 1941
BstACI GRCGYC 2 cut(s) 65, 114
BstAPI GCANNNNNTGC 1 cut(s) 592
BstBAI YACGTR 1 cut(s) 52
BstC8I GCNNGC 6 cut(s) 228, 540, 1319, 1825, 1829, 1839
BstDEI CTNAG 6 cut(s) 129, 496, 534, 1053, 1688, 1748
BstDSI CCRYGG 1 cut(s) 462
BstENI CCTNNNNNAGG 1 cut(s) 1293
BstF5I GGATG 4 cut(s) 207, 1364, 1539, 1919
BstFNI CGCG 4 cut(s) 215, 230, 428, 464
BstH2I RGCGCY 1 cut(s) 149
BstHHI GCGC 3 cut(s) 148, 232, 430
BstKTI GATC 7 cut(s) 604, 694, 814, 1555, 1769, 1863, 1896
BstMAI GTCTC 3 cut(s) 181, 537, 883
BstMBI GATC 7 cut(s) 601, 691, 811, 1552, 1766, 1860, 1893
BstMWI GCNNNNNNNGC 4 cut(s) 35, 583, 592, 1778
BstNI CCWGG 6 cut(s) 95, 912, 1210, 1272, 1631, 1971
BstNSI RCATGY 1 cut(s) 1827
BstPAI GACNNNNGTC 1 cut(s) 1249
BstSCI CCNGG 9 cut(s) 93, 339, 649, 910, 1075, 1208, 1270, 1629, 1969
BstSLI GKGCMC 1 cut(s) 102
BstUI CGCG 4 cut(s) 215, 230, 428, 464
BstV1I GCAGC 3 cut(s) 442, 595, 1814
BstV2I GAAGAC 1 cut(s) 68
BstX2I RGATCY 1 cut(s) 1860
BstYI RGATCY 1 cut(s) 1860
BsuRI GGCC 6 cut(s) 171, 344, 507, 988, 1299, 1317
BtgI CCRYGG 1 cut(s) 462
BtgZI GCGATG 2 cut(s) 109, 232
BtrI CACGTC 1 cut(s) 262
BtsCI GGATG 4 cut(s) 207, 1364, 1539, 1919
BtsIMutI CAGTG 1 cut(s) 1772
BveI ACCTGC 1 cut(s) 879
Cac8I GCNNGC 6 cut(s) 228, 540, 1319, 1825, 1829, 1839
CaiI CAGNNNCTG 1 cut(s) 1630
CciI TCATGA 1 cut(s) 1330
CfoI GCGC 3 cut(s) 148, 232, 430
Cfr10I RCCGGY 2 cut(s) 242, 269
Cfr13I GGNCC 6 cut(s) 170, 506, 772, 1019, 1079, 1286
Cfr42I CCGCGG 1 cut(s) 465
CseI GACGC 1 cut(s) 204
CsiI ACCWGGT 1 cut(s) 1969
Csp6I GTAC 4 cut(s) 49, 1355, 1853, 1974
CviAII CATG 7 cut(s) 34, 848, 1049, 1159, 1331, 1725, 1824
CviQI GTAC 4 cut(s) 49, 1355, 1853, 1974
DdeI CTNAG 6 cut(s) 129, 496, 534, 1053, 1688, 1748
DpnI GATC 7 cut(s) 603, 693, 813, 1554, 1768, 1862, 1895
DpnII GATC 7 cut(s) 601, 691, 811, 1552, 1766, 1860, 1893
DraI TTTAAA 1 cut(s) 703
EaeI YGGCCR 2 cut(s) 342, 1315
Eam1104I CTCTTC 2 cut(s) 1227, 1941
EarI CTCTTC 2 cut(s) 1227, 1941
EciI GGCGGA 2 cut(s) 53, 175
Eco130I CCWWGG 2 cut(s) 102, 1247
Eco47I GGWCC 4 cut(s) 772, 1019, 1079, 1286
Eco57I CTGAAG 3 cut(s) 618, 1101, 1539
EcoNI CCTNNNNNAGG 1 cut(s) 1293
EcoO109I RGGNCCY 1 cut(s) 506
EcoRI GAATTC 1 cut(s) 851
EcoRII CCWGG 6 cut(s) 93, 910, 1208, 1270, 1629, 1969
EcoT14I CCWWGG 2 cut(s) 102, 1247
ErhI CCWWGG 2 cut(s) 102, 1247
Esp3I CGTCTC 2 cut(s) 181, 537
FaeI CATG 7 cut(s) 37, 851, 1052, 1162, 1334, 1728, 1827
FalI AAGNNNNNCTT 2 cut(s) 1570, 1602
FaqI GGGAC 5 cut(s) 37, 92, 248, 386, 908
FatI CATG 7 cut(s) 33, 847, 1048, 1158, 1330, 1724, 1823
FauI CCCGC 2 cut(s) 220, 274
FauNDI CATATG 2 cut(s) 1002, 1611
FblI GTMKAC 2 cut(s) 327, 893
Fnu4HI GCNGC 9 cut(s) 169, 431, 462, 465, 578, 581, 584, 1276, 1803
FokI GGATG 4 cut(s) 194, 1351, 1526, 1926
Fsp4HI GCNGC 9 cut(s) 169, 431, 462, 465, 578, 581, 584, 1276, 1803
FspBI CTAG 8 cut(s) 489, 696, 864, 885, 953, 1248, 1254, 1478
GlaI GCGC 3 cut(s) 147, 231, 429
GluI GCNGC 9 cut(s) 169, 431, 462, 465, 578, 581, 584, 1276, 1803
GsaI CCCAGC 1 cut(s) 1417
GsuI CTGGAG 1 cut(s) 220
HaeII RGCGCY 1 cut(s) 149
HaeIII GGCC 6 cut(s) 171, 344, 507, 988, 1299, 1317
HgaI GACGC 1 cut(s) 204
HhaI GCGC 3 cut(s) 148, 232, 430
Hin1I GRCGYC 2 cut(s) 65, 114
Hin1II CATG 7 cut(s) 37, 851, 1052, 1162, 1334, 1728, 1827
Hin6I GCGC 3 cut(s) 146, 230, 428
HinP1I GCGC 3 cut(s) 146, 230, 428
HinfI GANTC 7 cut(s) 298, 527, 1259, 1267, 1334, 1684, 1730
HphI GGTGA 4 cut(s) 536, 701, 1562, 1859
Hpy166II GTNNAC 5 cut(s) 16, 118, 328, 894, 1342
Hpy188III TCNNGA 8 cut(s) 747, 930, 1022, 1331, 1858, 1864, 1911, 1940
Hpy8I GTNNAC 5 cut(s) 16, 118, 328, 894, 1342
Hpy99I CGWCG 2 cut(s) 70, 116
HpyAV CCTTC 7 cut(s) 672, 675, 936, 1152, 1371, 1449, 1576
HpyCH4IV ACGT 4 cut(s) 51, 65, 114, 261
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 583, 592, 1778
HpyF3I CTNAG 6 cut(s) 129, 496, 534, 1053, 1688, 1748
HpySE526I ACGT 4 cut(s) 51, 65, 114, 261
Hsp92I GRCGYC 2 cut(s) 65, 114
Hsp92II CATG 7 cut(s) 37, 851, 1052, 1162, 1334, 1728, 1827
HspAI GCGC 3 cut(s) 146, 230, 428
Kpn2I TCCGGA 2 cut(s) 929, 1021
KspI CCGCGG 1 cut(s) 465
Kzo9I GATC 7 cut(s) 601, 691, 811, 1552, 1766, 1860, 1893
LmnI GCTCC 6 cut(s) 652, 847, 1038, 1111, 1126, 1438
Lsp1109I GCAGC 3 cut(s) 442, 595, 1814
LweI GCATC 7 cut(s) 216, 255, 271, 400, 452, 582, 1548
MabI ACCWGGT 1 cut(s) 1969
MaeI CTAG 8 cut(s) 489, 696, 864, 885, 953, 1248, 1254, 1478
MaeII ACGT 4 cut(s) 51, 65, 114, 261
MaeIII GTNAC 5 cut(s) 52, 287, 1260, 1375, 1634
MalI GATC 7 cut(s) 603, 693, 813, 1554, 1768, 1862, 1895
MboI GATC 7 cut(s) 601, 691, 811, 1552, 1766, 1860, 1893
MflI RGATCY 1 cut(s) 1860
MhlI GDGCHC 2 cut(s) 102, 1435
MlsI TGGCCA 1 cut(s) 1317
MluNI TGGCCA 1 cut(s) 1317
MlyI GAGTC 1 cut(s) 1268
Mox20I TGGCCA 1 cut(s) 1317
MroI TCCGGA 2 cut(s) 929, 1021
MroXI GAANNNNTTC 2 cut(s) 995, 1449
MscI TGGCCA 1 cut(s) 1317
MseI TTAA 6 cut(s) 564, 630, 702, 834, 1281, 1704
Msp20I TGGCCA 1 cut(s) 1317
MspA1I CMGCKG 1 cut(s) 464
MspR9I CCNGG 9 cut(s) 95, 341, 651, 912, 1077, 1210, 1272, 1631, 1971
MvaI CCWGG 6 cut(s) 95, 912, 1210, 1272, 1631, 1971
MvnI CGCG 4 cut(s) 215, 230, 428, 464
MwoI GCNNNNNNNGC 4 cut(s) 35, 583, 592, 1778
NciI CCSGG 3 cut(s) 341, 651, 1077
NdeI CATATG 2 cut(s) 1002, 1611
NdeII GATC 7 cut(s) 601, 691, 811, 1552, 1766, 1860, 1893
NlaIII CATG 7 cut(s) 37, 851, 1052, 1162, 1334, 1728, 1827
NlaIV GGNNCC 4 cut(s) 99, 172, 508, 773
NmeAIII GCCGAG 1 cut(s) 122
NmuCI GTSAC 3 cut(s) 52, 287, 1260
NspI RCATGY 1 cut(s) 1827
PaeI GCATGC 1 cut(s) 1827
PagI TCATGA 1 cut(s) 1330
PcsI WCGNNNNNNNCGW 1 cut(s) 62
PdmI GAANNNNTTC 2 cut(s) 995, 1449
PfeI GAWTC 6 cut(s) 298, 527, 1267, 1334, 1684, 1730
PfoI TCCNGGA 2 cut(s) 649, 1075
PkrI GCNGC 9 cut(s) 170, 432, 463, 466, 579, 582, 585, 1277, 1804
PleI GAGTC 1 cut(s) 1267
PpsI GAGTC 1 cut(s) 1267
Ppu21I YACGTR 1 cut(s) 52
PshAI GACNNNNGTC 1 cut(s) 1249
PshBI ATTAAT 1 cut(s) 1704
Psp6I CCWGG 6 cut(s) 93, 910, 1208, 1270, 1629, 1969
PspFI CCCAGC 1 cut(s) 1413
PspGI CCWGG 6 cut(s) 93, 910, 1208, 1270, 1629, 1969
PspN4I GGNNCC 4 cut(s) 99, 172, 508, 773
PspPI GGNCC 6 cut(s) 170, 506, 772, 1019, 1079, 1286
PsrI GAACNNNNNNTAC 2 cut(s) 541, 573
PstNI CAGNNNCTG 1 cut(s) 1630
PsuI RGATCY 1 cut(s) 1860
RsaI GTAC 4 cut(s) 50, 1356, 1854, 1975
RsaNI GTAC 4 cut(s) 49, 1355, 1853, 1974
SacII CCGCGG 1 cut(s) 465
SaqAI TTAA 6 cut(s) 564, 630, 702, 834, 1281, 1704
SatI GCNGC 9 cut(s) 169, 431, 462, 465, 578, 581, 584, 1276, 1803
Sau3AI GATC 7 cut(s) 601, 691, 811, 1552, 1766, 1860, 1893
Sau96I GGNCC 6 cut(s) 170, 506, 772, 1019, 1079, 1286
ScaI AGTACT 1 cut(s) 1854
SchI GAGTC 1 cut(s) 1268
ScrFI CCNGG 9 cut(s) 95, 341, 651, 912, 1077, 1210, 1272, 1631, 1971
SduI GDGCHC 2 cut(s) 102, 1435
SexAI ACCWGGT 1 cut(s) 1969
SfaNI GCATC 7 cut(s) 216, 255, 271, 400, 452, 582, 1548
Sfr303I CCGCGG 1 cut(s) 465
SgrAI CRCCGGYG 1 cut(s) 269
SgrBI CCGCGG 1 cut(s) 465
SinI GGWCC 4 cut(s) 772, 1019, 1079, 1286
SmlI CTYRAG 2 cut(s) 754, 1856
SmoI CTYRAG 2 cut(s) 754, 1856
SphI GCATGC 1 cut(s) 1827
SspI AATATT 2 cut(s) 418, 1702
SspMI CTAG 8 cut(s) 489, 696, 864, 885, 953, 1248, 1254, 1478
StyD4I CCNGG 9 cut(s) 93, 339, 649, 910, 1075, 1208, 1270, 1629, 1969
StyI CCWWGG 2 cut(s) 102, 1247
TaiI ACGT 4 cut(s) 54, 68, 117, 264
TaqI TCGA 4 cut(s) 590, 1063, 1093, 1222
TatI WGTACW 1 cut(s) 1852
TauI GCSGC 6 cut(s) 171, 464, 467, 580, 583, 1278
TfiI GAWTC 6 cut(s) 298, 527, 1267, 1334, 1684, 1730
Tru1I TTAA 6 cut(s) 564, 630, 702, 834, 1281, 1704
Tru9I TTAA 6 cut(s) 564, 630, 702, 834, 1281, 1704
TscAI CASTG 1 cut(s) 1779
TseFI GTSAC 3 cut(s) 52, 287, 1260
TseI GCWGC 3 cut(s) 430, 583, 1802
Tsp45I GTSAC 3 cut(s) 52, 287, 1260
TspDTI ATGAA 7 cut(s) 173, 864, 1316, 1353, 1743, 1812, 1829
TspGWI ACGGA 3 cut(s) 33, 1532, 1547
TspRI CASTG 1 cut(s) 1779
VpaK11BI GGWCC 4 cut(s) 772, 1019, 1079, 1286
VspI ATTAAT 1 cut(s) 1704
XagI CCTNNNNNAGG 1 cut(s) 1293
XapI RAATTY 3 cut(s) 851, 871, 916
XceI RCATGY 1 cut(s) 1827
XmaJI CCTAGG 1 cut(s) 1247
XmiI GTMKAC 2 cut(s) 327, 893
XmnI GAANNNNTTC 2 cut(s) 995, 1449
XspI CTAG 8 cut(s) 489, 696, 864, 885, 953, 1248, 1254, 1478
ZraI GACGTC 2 cut(s) 66, 115
ZrmI AGTACT 1 cut(s) 1854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.