Rh3DG303700

NYN domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0011904
Physical Location & Seq
Reverse (-)
32122559 .. 32124736
2178 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG303700.1

Sequence Viewer

Length: 1806 bp
ATGAACTACTGCGGCCCCGTCTCCATCTCCGCCTACGGCGACACCAATCGCATCCCCGCCTCTGTACAGCACGCGCTCTCCAGCACCGGCATCGCCCTCAATCACGTCCCAGCAGGTGTAAAAGATGCAAGTGACAAGAAGATTCTAGTTGATATGCTTTTCTGGGCAGTAGATAACCCTGCTCCTTGCAATTATCTGCTTATTTCCGGAGACAGGGACTTCTCTAATGCTCTGCACCAGTTACGCATGAGAAGATATAATATCCTTCTCGCACAGCCACAAAAAGCATCCGCACCCCTCATTGCTGCAGCAAAGAGTGTGTGGCTTTGGACAAGCCTCTCGGCTGGAGGCCCCCCACTTACGAGTGGTGAATCATCTCTGCTTGCTAATGGTAGCAATTCCTTTAACCCAGACCCGCCGCAGCAGTCAATGCTTGAAAATCATCAGACAAACCAATCCATACCTCACTTTGACAATCAAGCTGGGGGAAATCAGAAGCCTTCTAACGGTGGAAGGGGTGGTGATCCTAAGCATAAAGGGAAGGTTAACAGGAAAAATCAAAATCAACCCAACATATCAAGAGCATCCAGTGTGCCAGTTGGGGTCCAAGATGACAAGAATAATGATTATCCTTACCAAACAGATCAGACGCAGGCAAAGCCGTTTAAGAAAGCTCCACACGAATTCTTTGGTGCTAGTGAGAATCTTGTTTCCACTAGCAGGTCTACGCCCAATTTCTTCCCTGGAAATTCTGCCCCTTCTGGAAGTAATGGAAACAGTTTTCTAGGTCAGCAAAACCAATATCCTCCTCATTTGAGGCCGAACAACCTCCATATGCCACCTAATTTTGGACTGGATAATATGCACCCTCCGAATTCTCATGGTCATGGTTTTCGACCTATTCCTCCCAGACCTGATGGCCCTCGATTTTCTTCAGCTCCACCTACAAATGTGCCTGACATGGGTAAGCTAAATATCTCTGATTACCCCAATTATGCTCAAAACCCACCCAGGTTTCCACATCGAACTATAGAAGAGTATAATAGACCAAGGTCTAGTGAGTCAAAGAATTTTAGCAGCTCTAATGGACCCCAAAAAGGCCATAATATGCAGGGGGGTGGCCAGCCGTTTCATCATGATTCCATGAACAACAGGTATCCTCGTGGTTCTGAATATCTTCCTCCTTCATCCCCCCCCATTACAGCAAACGACATTCCCAGTAATGGTATCTGGGGAAGTCAAGGTTGTGCACCACCTTCTGAACATGTTCAAGGCCTTATTGGCGTTATTCTACTAGCCCTGAACTCCTTGAAAGTAGAGAAAATTATGCCTACTGAAGCAAACATTACTGATTGCATCCGTTATGGTGATCCAAAACACCGAAATACCGATGTAAGGAAGGCCTTGGATTATGCAATAGAGCAACATATGGTAGTGAAGCAGAACCTGGGTGTTGCACTTCCAATGTATATTGGCAAAAAGCAAAAATTATGGAAGTGTGTGAATCTTATAGGCGGTAATCTTAATCACTACTCTAAAGCTACATGGGAGAAGTTACAGAATTTTCTGAGTTCATCAGATGGACGATTGGCAATAATGGCTTCTCAATGCAAATATGAAGCAGCTACAATTTTGAAAAAAAATTGCTTGCAAGAGCTTGCTTTGGGTGAAGTACTCCAGATCTTGAATATGTCAATTGCTATGAAGAAATGGATCATTCATCATCAGTCAGGATGGCAACCAATTTCTATTACCCTTCCAGAGACTAAACCTGAAGTAGCTTCTGAATCTGGTACTTGGGTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NYN OHA

Protein Analysis

601

Amino Acids

65.87

Weight (kDa)

9.24

Isoelectric Point (pI)

45.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NYN PF01936 5 - 105 4.2e-20 NYN domain
DUF7625 PF24620 413 - 507 4.3e-46 Domain of unknown function (DUF7625)
OHA PF14418 535 - 585 6.1e-11 OST-HTH Associated domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011904)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62200
fragaria_vesca FvH4_1g26400 FvH4_1g26400 FvH4_1g26400
malus_domestica MD09G1292400.v1.1 MD17G1283700.v1.1
prunus_persica Prupe.3G003800_v2.0.a1
pyrus_communis pycom09g19710 pycom17g27960
rosa_chinensis RchiOBHm_Chr3g0486181
rosa_laevigata RLG00000023095
rosa_multiflora Rmu_sc0000372.1_g000001
rosa_roxburghii Rroxscaffold_6G00396010
rosa_rugosa Rorug03G0223900
rosa_samantha Rh3AG273800 Rh3BG309100 Rh3CG307300 Rh3DG303700
rosa_wichuraiana Rw3G024260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 104
Acc36I ACCTGC 2 cut(s) 104, 711
AccI GTMKAC 1 cut(s) 725
AccII CGCG 1 cut(s) 74
AccIII TCCGGA 1 cut(s) 206
AciI CCGC 7 cut(s) 12, 30, 57, 291, 416, 419, 1515
AclWI GGATC 3 cut(s) 518, 1364, 1721
AcoI YGGCCR 1 cut(s) 1120
AcsI RAATTY 5 cut(s) 683, 748, 874, 1069, 1561
AcuI CTGAAG 3 cut(s) 918, 1356, 1794
AfaI GTAC 3 cut(s) 66, 1674, 1795
AfiI CCNNNNNNNGG 8 cut(s) 213, 506, 720, 848, 962, 1097, 1223, 1395
AflIII ACRYGT 1 cut(s) 1264
AgsI TTSAA 5 cut(s) 437, 1271, 1312, 1636, 1687
AjiI CACGTC 1 cut(s) 106
AjnI CCWGG 3 cut(s) 742, 1010, 1446
AluBI AGCT 9 cut(s) 482, 674, 938, 970, 1080, 1541, 1625, 1657, 1781
AluI AGCT 9 cut(s) 482, 674, 938, 970, 1080, 1541, 1625, 1657, 1781
Alw21I GWGCWC 1 cut(s) 1252
Alw26I GTCTC 3 cut(s) 25, 204, 1757
Alw44I GTGCAC 1 cut(s) 1248
AlwI GGATC 3 cut(s) 518, 1364, 1721
AlwNI CAGNNNCTG 1 cut(s) 1447
Aor13HI TCCGGA 1 cut(s) 206
AoxI GGCC 8 cut(s) 13, 349, 818, 919, 1099, 1120, 1273, 1401
ApaLI GTGCAC 1 cut(s) 1248
ApeKI GCWGC 5 cut(s) 305, 308, 421, 1077, 1622
ApoI RAATTY 5 cut(s) 683, 748, 874, 1069, 1561
Asp700I GAANNNNTTC 2 cut(s) 1176, 1266
AspLEI GCGC 1 cut(s) 76
AspS9I GGNCC 5 cut(s) 14, 350, 604, 920, 1088
AsuHPI GGTGA 4 cut(s) 380, 533, 1379, 1679
AvaII GGWCC 2 cut(s) 604, 1088
BaeGI GKGCMC 1 cut(s) 1252
BaeI ACNNNNGTAYC 1 cut(s) 1785
BalI TGGCCA 1 cut(s) 1122
BauI CACGAG 1 cut(s) 1161
Bbv12I GWGCWC 1 cut(s) 1252
BbvI GCAGC 5 cut(s) 292, 320, 433, 1089, 1634
BccI CCATC 4 cut(s) 32, 911, 1574, 1728
BceAI ACGGC 3 cut(s) 52, 646, 1111
BcgI CGANNNNNNTGC 2 cut(s) 73, 107
BciT130I CCWGG 3 cut(s) 744, 1012, 1448
BciVI GTATCC 1 cut(s) 1167
BcoDI GTCTC 3 cut(s) 25, 204, 1757
BfaI CTAG 6 cut(s) 146, 696, 717, 785, 1056, 1295
BfmI CTRYAG 2 cut(s) 306, 1029
BfuAI ACCTGC 2 cut(s) 104, 711
BfuI GTATCC 1 cut(s) 1167
BglI GCCNNNNNGGC 1 cut(s) 1281
BglII AGATCT 1 cut(s) 1680
BisI GCNGC 7 cut(s) 13, 306, 309, 419, 422, 1078, 1623
BlsI GCNGC 7 cut(s) 14, 307, 310, 420, 423, 1079, 1624
BmcAI AGTACT 1 cut(s) 1674
Bme1390I CCNGG 3 cut(s) 744, 1012, 1448
Bme18I GGWCC 2 cut(s) 604, 1088
BmgBI CACGTC 1 cut(s) 106
BmgT120I GGNCC 5 cut(s) 14, 350, 604, 920, 1088
BmiI GGNNCC 4 cut(s) 16, 352, 605, 1090
BmrFI CCNGG 3 cut(s) 744, 1012, 1448
BmrI ACTGGG 1 cut(s) 1212
BmsI GCATC 6 cut(s) 60, 99, 115, 296, 593, 1365
BmuI ACTGGG 1 cut(s) 1212
BoxI GACNNNNGTC 1 cut(s) 1051
BpmI CTGGAG 3 cut(s) 64, 366, 1661
Bpu10I CCTNAGC 1 cut(s) 528
BsaJI CCNNGG 5 cut(s) 742, 1010, 1049, 1404, 1447
BsaWI WCCGGW 1 cut(s) 206
BsaXI ACNNNNNCTCC 2 cut(s) 62, 92
Bsc4I CCNNNNNNNGG 8 cut(s) 213, 506, 720, 848, 962, 1097, 1223, 1395
Bse118I RCCGGY 1 cut(s) 86
Bse1I ACTGG 5 cut(s) 238, 588, 596, 858, 1218
Bse3DI GCAATG 1 cut(s) 300
BseAI TCCGGA 1 cut(s) 206
BseBI CCWGG 3 cut(s) 744, 1012, 1448
BseDI CCNNGG 5 cut(s) 742, 1010, 1049, 1404, 1447
BseGI GGATG 6 cut(s) 51, 287, 584, 1187, 1356, 1739
BseLI CCNNNNNNNGG 8 cut(s) 213, 506, 720, 848, 962, 1097, 1223, 1395
BseMI GCAATG 1 cut(s) 300
BseMII CTCAG 1 cut(s) 1559
BseNI ACTGG 5 cut(s) 238, 588, 596, 858, 1218
BseRI GAGGAG 1 cut(s) 798
BseSI GKGCMC 1 cut(s) 1252
BseXI GCAGC 5 cut(s) 292, 320, 433, 1089, 1634
BseYI CCCAGC 2 cut(s) 109, 482
BsgI GTGCAG 1 cut(s) 218
Bsh1236I CGCG 1 cut(s) 74
BshFI GGCC 8 cut(s) 15, 351, 820, 921, 1101, 1122, 1275, 1403
BsiHKAI GWGCWC 1 cut(s) 1252
BsiSI CCGG 2 cut(s) 87, 207
BslFI GGGAC 2 cut(s) 92, 230
BslI CCNNNNNNNGG 8 cut(s) 213, 506, 720, 848, 962, 1097, 1223, 1395
BsmAI GTCTC 3 cut(s) 25, 204, 1757
BsmBI CGTCTC 1 cut(s) 25
BsmFI GGGAC 2 cut(s) 92, 230
BsnI GGCC 8 cut(s) 15, 351, 820, 921, 1101, 1122, 1275, 1403
Bsp1286I GDGCHC 1 cut(s) 1252
Bsp13I TCCGGA 1 cut(s) 206
Bsp1407I TGTACA 1 cut(s) 64
Bsp143I GATC 5 cut(s) 523, 643, 1369, 1680, 1713
BspACI CCGC 7 cut(s) 12, 30, 57, 291, 416, 419, 1515
BspANI GGCC 8 cut(s) 15, 351, 820, 921, 1101, 1122, 1275, 1403
BspCNI CTCAG 1 cut(s) 1560
BspEI TCCGGA 1 cut(s) 206
BspFNI CGCG 1 cut(s) 74
BspHI TCATGA 1 cut(s) 1135
BspLI GGNNCC 4 cut(s) 16, 352, 605, 1090
BspMAI CTGCAG 1 cut(s) 310
BspMI ACCTGC 2 cut(s) 104, 711
BspPI GGATC 3 cut(s) 518, 1364, 1721
BsrDI GCAATG 1 cut(s) 300
BsrFI RCCGGY 1 cut(s) 86
BsrGI TGTACA 1 cut(s) 64
BsrI ACTGG 5 cut(s) 238, 588, 596, 858, 1218
BssAI RCCGGY 1 cut(s) 86
BssECI CCNNGG 5 cut(s) 742, 1010, 1049, 1404, 1447
BssMI GATC 5 cut(s) 523, 643, 1369, 1680, 1713
BssSI CACGAG 1 cut(s) 1161
BssT1I CCWWGG 2 cut(s) 1049, 1404
Bst2BI CACGAG 1 cut(s) 1161
Bst2UI CCWGG 3 cut(s) 744, 1012, 1448
Bst4CI ACNGT 2 cut(s) 509, 779
Bst6I CTCTTC 1 cut(s) 1029
BstAPI GCANNNNNTGC 1 cut(s) 430
BstAUI TGTACA 1 cut(s) 64
BstC8I GCNNGC 6 cut(s) 72, 384, 654, 1124, 1649, 1659
BstDEI CTNAG 2 cut(s) 528, 1568
BstF5I GGATG 6 cut(s) 51, 287, 584, 1187, 1356, 1739
BstFNI CGCG 1 cut(s) 74
BstHHI GCGC 1 cut(s) 76
BstKTI GATC 5 cut(s) 526, 646, 1372, 1683, 1716
BstMAI GTCTC 3 cut(s) 25, 204, 1757
BstMBI GATC 5 cut(s) 523, 643, 1369, 1680, 1713
BstMWI GCNNNNNNNGC 4 cut(s) 430, 658, 1281, 1598
BstNI CCWGG 3 cut(s) 744, 1012, 1448
BstNSI RCATGY 1 cut(s) 1268
BstPAI GACNNNNGTC 1 cut(s) 1051
BstSCI CCNGG 3 cut(s) 742, 1010, 1446
BstSFI CTRYAG 2 cut(s) 306, 1029
BstSLI GKGCMC 1 cut(s) 1252
BstUI CGCG 1 cut(s) 74
BstV1I GCAGC 5 cut(s) 292, 320, 433, 1089, 1634
BstX2I RGATCY 1 cut(s) 1680
BstYI RGATCY 1 cut(s) 1680
BsuI GTATCC 1 cut(s) 1167
BsuRI GGCC 8 cut(s) 15, 351, 820, 921, 1101, 1122, 1275, 1403
BtgZI GCGATG 1 cut(s) 76
BtrI CACGTC 1 cut(s) 106
BtsCI GGATG 6 cut(s) 51, 287, 584, 1187, 1356, 1739
BtsIMutI CAGTG 1 cut(s) 595
BveI ACCTGC 2 cut(s) 104, 711
Cac8I GCNNGC 6 cut(s) 72, 384, 654, 1124, 1649, 1659
CaiI CAGNNNCTG 1 cut(s) 1447
CciI TCATGA 1 cut(s) 1135
CfoI GCGC 1 cut(s) 76
Cfr10I RCCGGY 1 cut(s) 86
Cfr13I GGNCC 5 cut(s) 14, 350, 604, 920, 1088
CseI GACGC 1 cut(s) 658
Csp6I GTAC 3 cut(s) 65, 1673, 1794
CviAII CATG 8 cut(s) 247, 881, 887, 961, 1136, 1144, 1265, 1545
CviQI GTAC 3 cut(s) 65, 1673, 1794
DdeI CTNAG 2 cut(s) 528, 1568
DpnI GATC 5 cut(s) 525, 645, 1371, 1682, 1715
DpnII GATC 5 cut(s) 523, 643, 1369, 1680, 1713
EaeI YGGCCR 1 cut(s) 1120
Eam1104I CTCTTC 1 cut(s) 1029
EarI CTCTTC 1 cut(s) 1029
EciI GGCGGA 1 cut(s) 19
Eco130I CCWWGG 2 cut(s) 1049, 1404
Eco147I AGGCCT 2 cut(s) 1275, 1403
Eco47I GGWCC 2 cut(s) 604, 1088
Eco57I CTGAAG 3 cut(s) 918, 1356, 1794
EcoO109I RGGNCCY 1 cut(s) 350
EcoRI GAATTC 2 cut(s) 683, 874
EcoRII CCWGG 3 cut(s) 742, 1010, 1446
EcoT14I CCWWGG 2 cut(s) 1049, 1404
ErhI CCWWGG 2 cut(s) 1049, 1404
Esp3I CGTCTC 1 cut(s) 25
FaeI CATG 8 cut(s) 250, 884, 890, 964, 1139, 1147, 1268, 1548
FaqI GGGAC 2 cut(s) 92, 230
FatI CATG 8 cut(s) 246, 880, 886, 960, 1135, 1143, 1264, 1544
FauI CCCGC 2 cut(s) 64, 423
FauNDI CATATG 2 cut(s) 834, 1428
FblI GTMKAC 1 cut(s) 725
Fnu4HI GCNGC 7 cut(s) 13, 306, 309, 419, 422, 1078, 1623
FokI GGATG 6 cut(s) 38, 274, 571, 1174, 1343, 1746
Fsp4HI GCNGC 7 cut(s) 13, 306, 309, 419, 422, 1078, 1623
FspBI CTAG 6 cut(s) 146, 696, 717, 785, 1056, 1295
GlaI GCGC 1 cut(s) 75
GluI GCNGC 7 cut(s) 13, 306, 309, 419, 422, 1078, 1623
GsaI CCCAGC 2 cut(s) 113, 486
GsuI CTGGAG 3 cut(s) 64, 366, 1661
HaeIII GGCC 8 cut(s) 15, 351, 820, 921, 1101, 1122, 1275, 1403
HapII CCGG 2 cut(s) 87, 207
HgaI GACGC 1 cut(s) 658
HhaI GCGC 1 cut(s) 76
Hin1II CATG 8 cut(s) 250, 884, 890, 964, 1139, 1147, 1268, 1548
Hin6I GCGC 1 cut(s) 74
HinP1I GCGC 1 cut(s) 74
HincII GTYRAC 1 cut(s) 547
HindII GTYRAC 1 cut(s) 547
HinfI GANTC 7 cut(s) 142, 371, 703, 1061, 1139, 1504, 1787
HpaI GTTAAC 1 cut(s) 547
HpaII CCGG 2 cut(s) 87, 207
HphI GGTGA 4 cut(s) 380, 533, 1379, 1679
Hpy166II GTNNAC 3 cut(s) 547, 726, 1250
Hpy188III TCNNGA 8 cut(s) 207, 579, 762, 1136, 1678, 1684, 1731, 1760
Hpy8I GTNNAC 3 cut(s) 547, 726, 1250
HpyAV CCTTC 9 cut(s) 275, 507, 510, 535, 768, 1194, 1266, 1393, 1766
HpyCH4III ACNGT 2 cut(s) 509, 779
HpyCH4IV ACGT 1 cut(s) 105
HpyF10VI GCNNNNNNNGC 4 cut(s) 430, 658, 1281, 1598
HpyF3I CTNAG 2 cut(s) 528, 1568
HpySE526I ACGT 1 cut(s) 105
Hsp92II CATG 8 cut(s) 250, 884, 890, 964, 1139, 1147, 1268, 1548
HspAI GCGC 1 cut(s) 74
Kpn2I TCCGGA 1 cut(s) 206
KspAI GTTAAC 1 cut(s) 547
Kzo9I GATC 5 cut(s) 523, 643, 1369, 1680, 1713
LmnI GCTCC 3 cut(s) 187, 679, 943
Lsp1109I GCAGC 5 cut(s) 292, 320, 433, 1089, 1634
LweI GCATC 6 cut(s) 60, 99, 115, 296, 593, 1365
MaeI CTAG 6 cut(s) 146, 696, 717, 785, 1056, 1295
MaeII ACGT 1 cut(s) 105
MaeIII GTNAC 3 cut(s) 131, 240, 1554
MalI GATC 5 cut(s) 525, 645, 1371, 1682, 1715
MboI GATC 5 cut(s) 523, 643, 1369, 1680, 1713
MboII GAAGA 7 cut(s) 151, 264, 730, 924, 1046, 1169, 1717
MfeI CAATTG 1 cut(s) 1695
MflI RGATCY 1 cut(s) 1680
MhlI GDGCHC 1 cut(s) 1252
MlsI TGGCCA 1 cut(s) 1122
MluNI TGGCCA 1 cut(s) 1122
MlyI GAGTC 1 cut(s) 1070
Mox20I TGGCCA 1 cut(s) 1122
MroI TCCGGA 1 cut(s) 206
MroXI GAANNNNTTC 2 cut(s) 1176, 1266
MscI TGGCCA 1 cut(s) 1122
MseI TTAA 5 cut(s) 405, 546, 666, 1524, 1804
MslI CAYNNNNRTG 1 cut(s) 885
Msp20I TGGCCA 1 cut(s) 1122
MspI CCGG 2 cut(s) 87, 207
MspR9I CCNGG 3 cut(s) 744, 1012, 1448
MunI CAATTG 1 cut(s) 1695
MvaI CCWGG 3 cut(s) 744, 1012, 1448
MvnI CGCG 1 cut(s) 74
MwoI GCNNNNNNNGC 4 cut(s) 430, 658, 1281, 1598
NdeI CATATG 2 cut(s) 834, 1428
NdeII GATC 5 cut(s) 523, 643, 1369, 1680, 1713
NlaIII CATG 8 cut(s) 250, 884, 890, 964, 1139, 1147, 1268, 1548
NlaIV GGNNCC 4 cut(s) 16, 352, 605, 1090
NmeAIII GCCGAG 1 cut(s) 320
NmuCI GTSAC 1 cut(s) 131
NspI RCATGY 1 cut(s) 1268
PagI TCATGA 1 cut(s) 1135
PaqCI CACCTGC 1 cut(s) 104
PceI AGGCCT 2 cut(s) 1275, 1403
PciI ACATGT 1 cut(s) 1264
PdmI GAANNNNTTC 2 cut(s) 1176, 1266
PfeI GAWTC 6 cut(s) 142, 371, 703, 1139, 1504, 1787
PkrI GCNGC 7 cut(s) 14, 307, 310, 420, 423, 1079, 1624
PleI GAGTC 1 cut(s) 1069
PpsI GAGTC 1 cut(s) 1069
PscI ACATGT 1 cut(s) 1264
PshAI GACNNNNGTC 1 cut(s) 1051
Psp6I CCWGG 3 cut(s) 742, 1010, 1446
PspFI CCCAGC 2 cut(s) 109, 482
PspGI CCWGG 3 cut(s) 742, 1010, 1446
PspN4I GGNNCC 4 cut(s) 16, 352, 605, 1090
PspPI GGNCC 5 cut(s) 14, 350, 604, 920, 1088
PstI CTGCAG 1 cut(s) 310
PstNI CAGNNNCTG 1 cut(s) 1447
PsuI RGATCY 1 cut(s) 1680
RsaI GTAC 3 cut(s) 66, 1674, 1795
RsaNI GTAC 3 cut(s) 65, 1673, 1794
RseI CAYNNNNRTG 1 cut(s) 885
SaqAI TTAA 5 cut(s) 405, 546, 666, 1524, 1804
SatI GCNGC 7 cut(s) 13, 306, 309, 419, 422, 1078, 1623
Sau3AI GATC 5 cut(s) 523, 643, 1369, 1680, 1713
Sau96I GGNCC 5 cut(s) 14, 350, 604, 920, 1088
ScaI AGTACT 1 cut(s) 1674
SchI GAGTC 1 cut(s) 1070
ScrFI CCNGG 3 cut(s) 744, 1012, 1448
SduI GDGCHC 1 cut(s) 1252
SfaNI GCATC 6 cut(s) 60, 99, 115, 296, 593, 1365
SfcI CTRYAG 2 cut(s) 306, 1029
SinI GGWCC 2 cut(s) 604, 1088
SmiMI CAYNNNNRTG 1 cut(s) 885
SseBI AGGCCT 2 cut(s) 1275, 1403
SsiI CCGC 7 cut(s) 12, 30, 57, 291, 416, 419, 1515
SspMI CTAG 6 cut(s) 146, 696, 717, 785, 1056, 1295
StuI AGGCCT 2 cut(s) 1275, 1403
StyD4I CCNGG 3 cut(s) 742, 1010, 1446
StyI CCWWGG 2 cut(s) 1049, 1404
TaaI ACNGT 2 cut(s) 509, 779
TaiI ACGT 1 cut(s) 108
TaqI TCGA 3 cut(s) 895, 925, 1024
TatI WGTACW 2 cut(s) 64, 1672
TauI GCSGC 2 cut(s) 15, 421
TfiI GAWTC 6 cut(s) 142, 371, 703, 1139, 1504, 1787
Tru1I TTAA 5 cut(s) 405, 546, 666, 1524, 1804
Tru9I TTAA 5 cut(s) 405, 546, 666, 1524, 1804
TscAI CASTG 1 cut(s) 595
TseFI GTSAC 1 cut(s) 131
TseI GCWGC 5 cut(s) 305, 308, 421, 1077, 1622
Tsp45I GTSAC 1 cut(s) 131
TspDTI ATGAA 8 cut(s) 17, 1121, 1160, 1176, 1563, 1632, 1709, 1718
TspGWI ACGGA 1 cut(s) 1349
TspRI CASTG 1 cut(s) 595
VneI GTGCAC 1 cut(s) 1248
VpaK11BI GGWCC 2 cut(s) 604, 1088
XapI RAATTY 5 cut(s) 683, 748, 874, 1069, 1561
XceI RCATGY 1 cut(s) 1268
XmiI GTMKAC 1 cut(s) 725
XmnI GAANNNNTTC 2 cut(s) 1176, 1266
XspI CTAG 6 cut(s) 146, 696, 717, 785, 1056, 1295
ZrmI AGTACT 1 cut(s) 1674
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.