Rh3BG309100

NYN domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0011904
Physical Location & Seq
Reverse (-)
31291640 .. 31293993
2354 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG309100.1

Sequence Viewer

Length: 1986 bp
ATGCGTGGAGATGTGAACGGAGTGACGGCGAACATGGCGGAGCAGCAGTACGTGACGGCGAAGACGTCAGTGTGGTGGGACATAGAGAATTGCCAGGTGCCCAAGGTGTGCGACGTCCACGCCATCGCCCAGAATATTAGTTCGGCGCTGGTCAAGATGAACTACTGCGGCCCCGTCTCCATCTCCGCCTACGGCGACACCAATCGCATCCCCGCCTCTGTACAGCACGCGCTCTCCAGCACCGGCATCGCCCTCAATCACGTCCCAGCAGGTGTAAAAGATGCAAGTGACAAGAAGATTCTTGTTGATATGCTTTTCTGGGCAGTAGATAACCCTGCTCCTTGCAATTATCTGCTTATTTCCGGAGACAGGGACTTCTCTAATGCTCTACACCAGTTACGCATGAGAAGATATAATATTCTTCTCGCACAACCACAGAAAGCATCGGCACCCCTCATTGCTGCAGCAAAGAGTGTGTGGCTTTGGACAAGCCTCTCGGCTGGAGGTCCCCCACTTACGAGTGGTGAATCGTCTCAGCTTGCTAATGGTGGTACCAATTCCTTTAACCCAGAAATGCCGCAGCAGTCGATGCCTGAAAATCATCAGACAAACCAATCGATACCTTACTTTGACAATCAAGCTGGGGGAAATCAGAAGCCTTCTAACGGTGGAAGGGGTGGTGATCCTAAGCATAAAGCAAAGGCTAACAGGAAAAATCAAAATCAACCCAACACATCAAGAGCATCAAGTGTGCCAGTTGGGGTCCAAGATGACAAGAATAATGATTATCCTTACCAAACAGATCAGACACAGGCAAAGCAGTTTAGGAAAGCTCCACACGAATTCTTTGGTGCTAGTGAGAATCCTGTTTCCACTAGCTGGTCTACGCCCAATTTCTTCCCTGGAAATTCTGTCCCTTCTGGAAGTAATGGAAATAGTTTTCTAGGTCAGCAAAACCAGTATCCTCCTCATTTGAGGCCGAACAACCTCCATATGCCACCTAATTTTGGACTGGATAATATGTACCCTCCGAATTCTCATAGTCATGGTTTTCGACCTATTCCTCCCAGACCTGATGGCCCTCGATTTTCTTCAGCTCCACCTACAAATGTGCCTGACATGGGTAAGCTAAATATCTTTGATTACCCCAATTATGCTCAAAATCCACCCAGGTTTCCACATCGAACTGGAGAAGAGTATAATAGACCAAGGTCTAGTGAGTCGAAGAATCCTAGCAGCTCTAATGGACCCCAAAAAAGCCATAATGGACCCCAAAAAGGCCATAATATGCAGGGGGGTGGCCAGCCGTTTCATCATGATTCCATGAACAACAGGTATCCTCGTGGTTCTGAATATCGTCCTCCTTCATCCCCCCCCATTATAGCAAATGACATTCCCAGTAATGGTACCTGGGGAAGTCAAGGTTGTGCACCACCTTCTGAACATGTTCAAGGCCTTATTGGCGTTATTCTACTAGCCCTGAACTCCTTGAAAGTAGAGAAAATTATGCCTACTGAAGCAAACATTACTGATTGCATCCGTTATGGGGATCCAAAACACCGAAATACTGATGTAAGGAAGGCCTTGGATTATGCAATAGAGCAACATATGGTAGTGAAGCAGAACCTGGGTGCTGCACTTCCAATGTATATTGGCAAAAAGCAAAAATTATGGAAGTGTGTGAATCTTATAGGCGGTAATCTTAATCTCTACTCTAAAGCTACATGGGAGAAGTTACAGAATTTTCTGAGTTCATCAGATGGACGATCGGCAATAATGGCTTCTCAATGCAAATATGAAGCAGCTACAATTTTGAAAAAAAATTGCTTGCAAGAGCTTGCTTTGGGTGAAGTACTCCAGATGTTGAATATGTCAATTGCTATGAAGAAATGGATCATTCATCATCAGTCAGGATGGCAACCAATTTCTATTACCCTTCCAGAGACTAAACCTGAAGTAGCTTCTGAATCTGGTACTTGGATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NYN OHA

Protein Analysis

661

Amino Acids

72.55

Weight (kDa)

9.13

Isoelectric Point (pI)

44.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NYN PF01936 21 - 157 5e-29 NYN domain
DUF7625 PF24620 473 - 567 3.7e-46 Domain of unknown function (DUF7625)
OHA PF14418 595 - 645 5.4e-11 OST-HTH Associated domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011904)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62200
fragaria_vesca FvH4_1g26400 FvH4_1g26400 FvH4_1g26400
malus_domestica MD09G1292400.v1.1 MD17G1283700.v1.1
prunus_persica Prupe.3G003800_v2.0.a1
pyrus_communis pycom09g19710 pycom17g27960
rosa_chinensis RchiOBHm_Chr3g0486181
rosa_laevigata RLG00000023095
rosa_multiflora Rmu_sc0000372.1_g000001
rosa_roxburghii Rroxscaffold_6G00396010
rosa_rugosa Rorug03G0223900
rosa_samantha Rh3AG273800 Rh3BG309100 Rh3CG307300 Rh3DG303700
rosa_wichuraiana Rw3G024260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 260
AatII GACGTC 2 cut(s) 68, 117
Acc36I ACCTGC 1 cut(s) 260
Acc65I GGTACC 2 cut(s) 551, 1406
AccB1I GGYRCC 4 cut(s) 97, 448, 551, 1406
AccB7I CCANNNNNTGG 1 cut(s) 879
AccI GTMKAC 1 cut(s) 884
AccII CGCG 1 cut(s) 230
AccIII TCCGGA 1 cut(s) 362
AciI CCGC 6 cut(s) 38, 168, 186, 213, 578, 1695
AclWI GGATC 4 cut(s) 677, 1544, 1557, 1901
AcoI YGGCCR 1 cut(s) 1300
AcsI RAATTY 4 cut(s) 842, 907, 1033, 1741
AcuI CTGAAG 3 cut(s) 1077, 1536, 1974
AcyI GRCGYC 2 cut(s) 65, 114
AfaI GTAC 7 cut(s) 50, 222, 553, 1025, 1408, 1854, 1975
AfiI CCNNNNNNNGG 8 cut(s) 369, 665, 879, 1007, 1121, 1277, 1403, 1546
AflIII ACRYGT 1 cut(s) 1444
AgsI TTSAA 4 cut(s) 1451, 1492, 1816, 1867
AjiI CACGTC 1 cut(s) 262
AjnI CCWGG 5 cut(s) 93, 901, 1169, 1409, 1626
Alw21I GWGCWC 1 cut(s) 1432
Alw26I GTCTC 4 cut(s) 181, 360, 537, 1937
Alw44I GTGCAC 1 cut(s) 1428
AlwI GGATC 4 cut(s) 677, 1544, 1557, 1901
AlwNI CAGNNNCTG 1 cut(s) 1627
Aor13HI TCCGGA 1 cut(s) 362
AoxI GGCC 7 cut(s) 169, 977, 1078, 1279, 1300, 1453, 1581
ApaLI GTGCAC 1 cut(s) 1428
ApeKI GCWGC 7 cut(s) 43, 461, 464, 580, 1236, 1634, 1802
ApoI RAATTY 4 cut(s) 842, 907, 1033, 1741
Asp700I GAANNNNTTC 1 cut(s) 1446
Asp718I GGTACC 2 cut(s) 551, 1406
AspLEI GCGC 2 cut(s) 148, 232
AspS9I GGNCC 6 cut(s) 170, 506, 763, 1079, 1247, 1268
AsuHPI GGTGA 3 cut(s) 536, 692, 1859
AvaII GGWCC 4 cut(s) 506, 763, 1247, 1268
BaeGI GKGCMC 2 cut(s) 102, 1432
BalI TGGCCA 1 cut(s) 1302
BamHI GGATCC 1 cut(s) 1549
BanI GGYRCC 4 cut(s) 97, 448, 551, 1406
BauI CACGAG 1 cut(s) 1341
BbsI GAAGAC 1 cut(s) 68
Bbv12I GWGCWC 1 cut(s) 1432
BbvI GCAGC 7 cut(s) 55, 448, 476, 592, 1248, 1621, 1814
BccI CCATC 5 cut(s) 131, 188, 1070, 1754, 1908
BceAI ACGGC 4 cut(s) 42, 72, 208, 1291
BcgI CGANNNNNNTGC 2 cut(s) 229, 263
BciT130I CCWGG 5 cut(s) 95, 903, 1171, 1411, 1628
BciVI GTATCC 2 cut(s) 972, 1347
BcoDI GTCTC 4 cut(s) 181, 360, 537, 1937
BfaI CTAG 6 cut(s) 855, 876, 944, 1215, 1233, 1475
BfmI CTRYAG 1 cut(s) 462
BfoI RGCGCY 1 cut(s) 149
BfuAI ACCTGC 1 cut(s) 260
BfuI GTATCC 2 cut(s) 972, 1347
BglI GCCNNNNNGGC 1 cut(s) 1461
BisI GCNGC 9 cut(s) 44, 169, 462, 465, 578, 581, 1237, 1635, 1803
BlsI GCNGC 9 cut(s) 45, 170, 463, 466, 579, 582, 1238, 1636, 1804
BmcAI AGTACT 1 cut(s) 1854
Bme1390I CCNGG 5 cut(s) 95, 903, 1171, 1411, 1628
Bme18I GGWCC 4 cut(s) 506, 763, 1247, 1268
BmgBI CACGTC 1 cut(s) 262
BmgT120I GGNCC 6 cut(s) 170, 506, 763, 1079, 1247, 1268
BmrFI CCNGG 5 cut(s) 95, 903, 1171, 1411, 1628
BmrI ACTGGG 1 cut(s) 1392
BmsI GCATC 7 cut(s) 216, 255, 271, 452, 579, 752, 1545
BmuI ACTGGG 1 cut(s) 1392
BoxI GACNNNNGTC 1 cut(s) 1210
BpiI GAAGAC 1 cut(s) 68
BpmI CTGGAG 4 cut(s) 220, 522, 1209, 1841
Bpu10I CCTNAGC 1 cut(s) 687
Bsa29I ATCGAT 1 cut(s) 617
BsaAI YACGTR 1 cut(s) 52
BsaHI GRCGYC 2 cut(s) 65, 114
BsaJI CCNNGG 7 cut(s) 102, 901, 1169, 1208, 1410, 1584, 1627
BsaWI WCCGGW 1 cut(s) 362
BsaXI ACNNNNNCTCC 4 cut(s) 32, 62, 218, 248
Bsc4I CCNNNNNNNGG 8 cut(s) 369, 665, 879, 1007, 1121, 1277, 1403, 1546
Bse118I RCCGGY 1 cut(s) 242
Bse1I ACTGG 6 cut(s) 394, 755, 958, 1017, 1192, 1398
Bse3DI GCAATG 1 cut(s) 456
BseAI TCCGGA 1 cut(s) 362
BseBI CCWGG 5 cut(s) 95, 903, 1171, 1411, 1628
BseCI ATCGAT 1 cut(s) 617
BseDI CCNNGG 7 cut(s) 102, 901, 1169, 1208, 1410, 1584, 1627
BseGI GGATG 4 cut(s) 207, 1367, 1536, 1919
BseLI CCNNNNNNNGG 8 cut(s) 369, 665, 879, 1007, 1121, 1277, 1403, 1546
BseMI GCAATG 1 cut(s) 456
BseMII CTCAG 2 cut(s) 548, 1739
BseNI ACTGG 6 cut(s) 394, 755, 958, 1017, 1192, 1398
BseRI GAGGAG 1 cut(s) 957
BseSI GKGCMC 2 cut(s) 102, 1432
BseXI GCAGC 7 cut(s) 55, 448, 476, 592, 1248, 1621, 1814
BseYI CCCAGC 2 cut(s) 265, 641
BsgI GTGCAG 1 cut(s) 1620
Bsh1236I CGCG 1 cut(s) 230
Bsh1285I CGRYCG 1 cut(s) 1769
BshFI GGCC 7 cut(s) 171, 979, 1080, 1281, 1302, 1455, 1583
BshNI GGYRCC 4 cut(s) 97, 448, 551, 1406
BshVI ATCGAT 1 cut(s) 617
BsiEI CGRYCG 1 cut(s) 1769
BsiHKAI GWGCWC 1 cut(s) 1432
BsiSI CCGG 2 cut(s) 243, 363
BslFI GGGAC 5 cut(s) 92, 248, 386, 492, 899
BslI CCNNNNNNNGG 8 cut(s) 369, 665, 879, 1007, 1121, 1277, 1403, 1546
BsmAI GTCTC 4 cut(s) 181, 360, 537, 1937
BsmBI CGTCTC 2 cut(s) 181, 537
BsmFI GGGAC 5 cut(s) 92, 248, 386, 492, 899
BsnI GGCC 7 cut(s) 171, 979, 1080, 1281, 1302, 1455, 1583
Bsp1286I GDGCHC 2 cut(s) 102, 1432
Bsp13I TCCGGA 1 cut(s) 362
Bsp1407I TGTACA 1 cut(s) 220
Bsp143I GATC 5 cut(s) 682, 802, 1549, 1766, 1893
BspACI CCGC 6 cut(s) 38, 168, 186, 213, 578, 1695
BspANI GGCC 7 cut(s) 171, 979, 1080, 1281, 1302, 1455, 1583
BspCNI CTCAG 2 cut(s) 547, 1740
BspDI ATCGAT 1 cut(s) 617
BspEI TCCGGA 1 cut(s) 362
BspFNI CGCG 1 cut(s) 230
BspHI TCATGA 1 cut(s) 1315
BspMAI CTGCAG 1 cut(s) 466
BspMI ACCTGC 1 cut(s) 260
BspPI GGATC 4 cut(s) 677, 1544, 1557, 1901
BspT107I GGYRCC 4 cut(s) 97, 448, 551, 1406
BsrDI GCAATG 1 cut(s) 456
BsrFI RCCGGY 1 cut(s) 242
BsrGI TGTACA 1 cut(s) 220
BsrI ACTGG 6 cut(s) 394, 755, 958, 1017, 1192, 1398
BssAI RCCGGY 1 cut(s) 242
BssECI CCNNGG 7 cut(s) 102, 901, 1169, 1208, 1410, 1584, 1627
BssMI GATC 5 cut(s) 682, 802, 1549, 1766, 1893
BssNI GRCGYC 2 cut(s) 65, 114
BssSI CACGAG 1 cut(s) 1341
BssT1I CCWWGG 3 cut(s) 102, 1208, 1584
Bst2BI CACGAG 1 cut(s) 1341
Bst2UI CCWGG 5 cut(s) 95, 903, 1171, 1411, 1628
Bst4CI ACNGT 1 cut(s) 668
Bst6I CTCTTC 1 cut(s) 1188
BstACI GRCGYC 2 cut(s) 65, 114
BstAPI GCANNNNNTGC 1 cut(s) 589
BstAUI TGTACA 1 cut(s) 220
BstBAI YACGTR 1 cut(s) 52
BstC8I GCNNGC 5 cut(s) 228, 540, 1304, 1829, 1839
BstDEI CTNAG 3 cut(s) 534, 687, 1748
BstF5I GGATG 4 cut(s) 207, 1367, 1536, 1919
BstFNI CGCG 1 cut(s) 230
BstH2I RGCGCY 1 cut(s) 149
BstHHI GCGC 2 cut(s) 148, 232
BstKTI GATC 5 cut(s) 685, 805, 1552, 1769, 1896
BstMAI GTCTC 4 cut(s) 181, 360, 537, 1937
BstMBI GATC 5 cut(s) 682, 802, 1549, 1766, 1893
BstMCI CGRYCG 1 cut(s) 1769
BstMWI GCNNNNNNNGC 4 cut(s) 35, 589, 1461, 1778
BstNI CCWGG 5 cut(s) 95, 903, 1171, 1411, 1628
BstNSI RCATGY 1 cut(s) 1448
BstPAI GACNNNNGTC 1 cut(s) 1210
BstSCI CCNGG 5 cut(s) 93, 901, 1169, 1409, 1626
BstSFI CTRYAG 1 cut(s) 462
BstSLI GKGCMC 2 cut(s) 102, 1432
BstUI CGCG 1 cut(s) 230
BstV1I GCAGC 7 cut(s) 55, 448, 476, 592, 1248, 1621, 1814
BstV2I GAAGAC 1 cut(s) 68
BstX2I RGATCY 1 cut(s) 1549
BstYI RGATCY 1 cut(s) 1549
Bsu15I ATCGAT 1 cut(s) 617
BsuI GTATCC 2 cut(s) 972, 1347
BsuRI GGCC 7 cut(s) 171, 979, 1080, 1281, 1302, 1455, 1583
BsuTUI ATCGAT 1 cut(s) 617
BtgZI GCGATG 2 cut(s) 109, 232
BtrI CACGTC 1 cut(s) 262
BtsCI GGATG 4 cut(s) 207, 1367, 1536, 1919
BtsIMutI CAGTG 1 cut(s) 75
BveI ACCTGC 1 cut(s) 260
Cac8I GCNNGC 5 cut(s) 228, 540, 1304, 1829, 1839
CaiI CAGNNNCTG 1 cut(s) 1627
CciI TCATGA 1 cut(s) 1315
CfoI GCGC 2 cut(s) 148, 232
Cfr10I RCCGGY 1 cut(s) 242
Cfr13I GGNCC 6 cut(s) 170, 506, 763, 1079, 1247, 1268
ClaI ATCGAT 1 cut(s) 617
Csp6I GTAC 7 cut(s) 49, 221, 552, 1024, 1407, 1853, 1974
CviAII CATG 8 cut(s) 34, 403, 1046, 1120, 1316, 1324, 1445, 1725
CviQI GTAC 7 cut(s) 49, 221, 552, 1024, 1407, 1853, 1974
DdeI CTNAG 3 cut(s) 534, 687, 1748
DpnI GATC 5 cut(s) 684, 804, 1551, 1768, 1895
DpnII GATC 5 cut(s) 682, 802, 1549, 1766, 1893
EaeI YGGCCR 1 cut(s) 1300
Eam1104I CTCTTC 1 cut(s) 1188
EarI CTCTTC 1 cut(s) 1188
EciI GGCGGA 2 cut(s) 53, 175
Eco130I CCWWGG 3 cut(s) 102, 1208, 1584
Eco147I AGGCCT 2 cut(s) 1455, 1583
Eco47I GGWCC 4 cut(s) 506, 763, 1247, 1268
Eco57I CTGAAG 3 cut(s) 1077, 1536, 1974
EcoO109I RGGNCCY 1 cut(s) 506
EcoRI GAATTC 2 cut(s) 842, 1033
EcoRII CCWGG 5 cut(s) 93, 901, 1169, 1409, 1626
EcoT14I CCWWGG 3 cut(s) 102, 1208, 1584
ErhI CCWWGG 3 cut(s) 102, 1208, 1584
Esp3I CGTCTC 2 cut(s) 181, 537
FaeI CATG 8 cut(s) 37, 406, 1049, 1123, 1319, 1327, 1448, 1728
FaqI GGGAC 5 cut(s) 92, 248, 386, 492, 899
FatI CATG 8 cut(s) 33, 402, 1045, 1119, 1315, 1323, 1444, 1724
FauI CCCGC 1 cut(s) 220
FauNDI CATATG 2 cut(s) 993, 1608
FblI GTMKAC 1 cut(s) 884
Fnu4HI GCNGC 9 cut(s) 44, 169, 462, 465, 578, 581, 1237, 1635, 1803
FokI GGATG 4 cut(s) 194, 1354, 1523, 1926
Fsp4HI GCNGC 9 cut(s) 44, 169, 462, 465, 578, 581, 1237, 1635, 1803
FspBI CTAG 6 cut(s) 855, 876, 944, 1215, 1233, 1475
GlaI GCGC 2 cut(s) 147, 231
GluI GCNGC 9 cut(s) 44, 169, 462, 465, 578, 581, 1237, 1635, 1803
GsaI CCCAGC 2 cut(s) 269, 645
GsuI CTGGAG 4 cut(s) 220, 522, 1209, 1841
HaeII RGCGCY 1 cut(s) 149
HaeIII GGCC 7 cut(s) 171, 979, 1080, 1281, 1302, 1455, 1583
HapII CCGG 2 cut(s) 243, 363
HhaI GCGC 2 cut(s) 148, 232
Hin1I GRCGYC 2 cut(s) 65, 114
Hin1II CATG 8 cut(s) 37, 406, 1049, 1123, 1319, 1327, 1448, 1728
Hin6I GCGC 2 cut(s) 146, 230
HinP1I GCGC 2 cut(s) 146, 230
HinfI GANTC 8 cut(s) 298, 527, 862, 1220, 1228, 1319, 1684, 1967
HpaII CCGG 2 cut(s) 243, 363
HphI GGTGA 3 cut(s) 536, 692, 1859
Hpy166II GTNNAC 4 cut(s) 16, 118, 885, 1430
Hpy188I TCNGA 9 cut(s) 606, 654, 807, 1032, 1351, 1441, 1749, 1759, 1966
Hpy188III TCNNGA 8 cut(s) 154, 363, 738, 921, 1316, 1858, 1911, 1940
Hpy8I GTNNAC 4 cut(s) 16, 118, 885, 1430
Hpy99I CGWCG 1 cut(s) 116
HpyAV CCTTC 7 cut(s) 666, 669, 927, 1374, 1446, 1573, 1946
HpyCH4III ACNGT 1 cut(s) 668
HpyCH4IV ACGT 4 cut(s) 51, 65, 114, 261
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 589, 1461, 1778
HpyF3I CTNAG 3 cut(s) 534, 687, 1748
HpySE526I ACGT 4 cut(s) 51, 65, 114, 261
Hsp92I GRCGYC 2 cut(s) 65, 114
Hsp92II CATG 8 cut(s) 37, 406, 1049, 1123, 1319, 1327, 1448, 1728
HspAI GCGC 2 cut(s) 146, 230
Kpn2I TCCGGA 1 cut(s) 362
KpnI GGTACC 2 cut(s) 555, 1410
Kzo9I GATC 5 cut(s) 682, 802, 1549, 1766, 1893
LmnI GCTCC 4 cut(s) 40, 343, 838, 1102
Lsp1109I GCAGC 7 cut(s) 55, 448, 476, 592, 1248, 1621, 1814
LweI GCATC 7 cut(s) 216, 255, 271, 452, 579, 752, 1545
MaeI CTAG 6 cut(s) 855, 876, 944, 1215, 1233, 1475
MaeII ACGT 4 cut(s) 51, 65, 114, 261
MaeIII GTNAC 5 cut(s) 22, 52, 287, 396, 1734
MalI GATC 5 cut(s) 684, 804, 1551, 1768, 1895
MboI GATC 5 cut(s) 682, 802, 1549, 1766, 1893
MboII GAAGA 9 cut(s) 73, 307, 413, 420, 889, 1083, 1205, 1237, 1897
MfeI CAATTG 1 cut(s) 1875
MflI RGATCY 1 cut(s) 1549
MhlI GDGCHC 2 cut(s) 102, 1432
MlsI TGGCCA 1 cut(s) 1302
MluNI TGGCCA 1 cut(s) 1302
MlyI GAGTC 1 cut(s) 1229
Mox20I TGGCCA 1 cut(s) 1302
MroI TCCGGA 1 cut(s) 362
MroXI GAANNNNTTC 1 cut(s) 1446
MscI TGGCCA 1 cut(s) 1302
MseI TTAA 3 cut(s) 564, 1704, 1984
MslI CAYNNNNRTG 1 cut(s) 1044
Msp20I TGGCCA 1 cut(s) 1302
MspI CCGG 2 cut(s) 243, 363
MspR9I CCNGG 5 cut(s) 95, 903, 1171, 1411, 1628
MunI CAATTG 1 cut(s) 1875
MvaI CCWGG 5 cut(s) 95, 903, 1171, 1411, 1628
MvnI CGCG 1 cut(s) 230
MwoI GCNNNNNNNGC 4 cut(s) 35, 589, 1461, 1778
NdeI CATATG 2 cut(s) 993, 1608
NdeII GATC 5 cut(s) 682, 802, 1549, 1766, 1893
NlaIII CATG 8 cut(s) 37, 406, 1049, 1123, 1319, 1327, 1448, 1728
NmeAIII GCCGAG 1 cut(s) 476
NmuCI GTSAC 3 cut(s) 22, 52, 287
NspI RCATGY 1 cut(s) 1448
PagI TCATGA 1 cut(s) 1315
PaqCI CACCTGC 1 cut(s) 260
PceI AGGCCT 2 cut(s) 1455, 1583
PciI ACATGT 1 cut(s) 1444
PcsI WCGNNNNNNNCGW 1 cut(s) 62
PdmI GAANNNNTTC 1 cut(s) 1446
PfeI GAWTC 7 cut(s) 298, 527, 862, 1228, 1319, 1684, 1967
PflMI CCANNNNNTGG 1 cut(s) 879
PkrI GCNGC 9 cut(s) 45, 170, 463, 466, 579, 582, 1238, 1636, 1804
Ple19I CGATCG 1 cut(s) 1769
PleI GAGTC 1 cut(s) 1228
PpsI GAGTC 1 cut(s) 1228
Ppu21I YACGTR 1 cut(s) 52
PpuMI RGGWCCY 1 cut(s) 506
PscI ACATGT 1 cut(s) 1444
PshAI GACNNNNGTC 1 cut(s) 1210
Psp5II RGGWCCY 1 cut(s) 506
Psp6I CCWGG 5 cut(s) 93, 901, 1169, 1409, 1626
PspFI CCCAGC 2 cut(s) 265, 641
PspGI CCWGG 5 cut(s) 93, 901, 1169, 1409, 1626
PspPI GGNCC 6 cut(s) 170, 506, 763, 1079, 1247, 1268
PspPPI RGGWCCY 1 cut(s) 506
PstI CTGCAG 1 cut(s) 466
PstNI CAGNNNCTG 1 cut(s) 1627
PsuI RGATCY 1 cut(s) 1549
PvuI CGATCG 1 cut(s) 1769
RsaI GTAC 7 cut(s) 50, 222, 553, 1025, 1408, 1854, 1975
RsaNI GTAC 7 cut(s) 49, 221, 552, 1024, 1407, 1853, 1974
RseI CAYNNNNRTG 1 cut(s) 1044
SaqAI TTAA 3 cut(s) 564, 1704, 1984
SatI GCNGC 9 cut(s) 44, 169, 462, 465, 578, 581, 1237, 1635, 1803
Sau3AI GATC 5 cut(s) 682, 802, 1549, 1766, 1893
Sau96I GGNCC 6 cut(s) 170, 506, 763, 1079, 1247, 1268
ScaI AGTACT 1 cut(s) 1854
SchI GAGTC 1 cut(s) 1229
ScrFI CCNGG 5 cut(s) 95, 903, 1171, 1411, 1628
SduI GDGCHC 2 cut(s) 102, 1432
SfaNI GCATC 7 cut(s) 216, 255, 271, 452, 579, 752, 1545
SfcI CTRYAG 1 cut(s) 462
SinI GGWCC 4 cut(s) 506, 763, 1247, 1268
SmiMI CAYNNNNRTG 1 cut(s) 1044
SseBI AGGCCT 2 cut(s) 1455, 1583
SsiI CCGC 6 cut(s) 38, 168, 186, 213, 578, 1695
SspI AATATT 2 cut(s) 136, 418
SspMI CTAG 6 cut(s) 855, 876, 944, 1215, 1233, 1475
StuI AGGCCT 2 cut(s) 1455, 1583
StyD4I CCNGG 5 cut(s) 93, 901, 1169, 1409, 1626
StyI CCWWGG 3 cut(s) 102, 1208, 1584
TaaI ACNGT 1 cut(s) 668
TaiI ACGT 4 cut(s) 54, 68, 117, 264
TaqI TCGA 6 cut(s) 587, 617, 1054, 1084, 1183, 1223
TatI WGTACW 2 cut(s) 220, 1852
TauI GCSGC 2 cut(s) 171, 580
TfiI GAWTC 7 cut(s) 298, 527, 862, 1228, 1319, 1684, 1967
Tru1I TTAA 3 cut(s) 564, 1704, 1984
Tru9I TTAA 3 cut(s) 564, 1704, 1984
TscAI CASTG 1 cut(s) 75
TseFI GTSAC 3 cut(s) 22, 52, 287
TseI GCWGC 7 cut(s) 43, 461, 464, 580, 1236, 1634, 1802
Tsp45I GTSAC 3 cut(s) 22, 52, 287
TspDTI ATGAA 8 cut(s) 173, 1301, 1340, 1356, 1743, 1812, 1889, 1898
TspGWI ACGGA 2 cut(s) 33, 1529
TspRI CASTG 1 cut(s) 75
Van91I CCANNNNNTGG 1 cut(s) 879
VneI GTGCAC 1 cut(s) 1428
VpaK11BI GGWCC 4 cut(s) 506, 763, 1247, 1268
XapI RAATTY 4 cut(s) 842, 907, 1033, 1741
XceI RCATGY 1 cut(s) 1448
XmiI GTMKAC 1 cut(s) 884
XmnI GAANNNNTTC 1 cut(s) 1446
XspI CTAG 6 cut(s) 855, 876, 944, 1215, 1233, 1475
ZraI GACGTC 2 cut(s) 66, 115
ZrmI AGTACT 1 cut(s) 1854
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.