RLG00000023095

NYN domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0011904
Physical Location & Seq
Forward (+)
18039448 .. 18043140
3693 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000023095

Sequence Viewer

Length: 1773 bp
ATGCGTGGAGATGTGAACGGAGTGACGGCGAACATGGCGGAGCAGCAGTACGTGAAGGCGAAGACGTCAGTGTGGTGGGACATAGAGAATTGCCAGGTGCCCAAGGTGTGCGACGTCCACGCCATCGCCCAGAATATTAGTTCGGCGCTGGTGAATATGAACTACTGCGGCCCCGTCTCCATCTCCGCCTACGGCGACACCAATCGCATCCCCGCCTCTGTACAGCACGCGCTCTCCAGCACCGGCATCGCCCTCAATCACGTCCCAGCAGGTGTAAAAGATGCGAGTGACAAGAAGATTCTAGTTGATATGCTTTTCTGGGCAGTAGATAACCCTGCTCCTTGCAATTATCTGCTTATTTCCGGAGACAGGGACTTCTCTAATGCTCTACACCAGTTACGCATGAGAAGATATAATATCCTTCTTGCACAGCCACAAAAAGCATCCGCACCCCTCATTGCTGCAGCAAAGAGTGTGTGGCTTTGGACAAGCCTCTCGGCTGGAGGTCCCCCACTTACGAGTGGTGAATCATCTCTGCTTGCTAATGGTACCAGTTCCTTTAACCCAGACCCGCCGCAGCAGTCGATGCCTGAAAATCTTCAGACAAACCAATCGATACCTCACTTTGACAATCAAGCTGGGGGAAATCAGAAGCCTTCTAACGGTGGAAGGGGTGGTGATCCCAAGCAGAAAGGGAGGGCTAACAGGAAAAATCAAAATCAACCCAACATATCAAGAGCATCAAGTGTGCCAGTTGGGGTCCAAGATGACAAGAATAACGATTATCCTTACCAAACAGATCAGACGCAGGCAAAGCAGTTTAAGAAAGCTCCACACGAATTCTTTGGTGCTAGTGAGAATCTGGTTTCCACTAGCAGGTCTACGCCCAATTTCTTCCCTGGAAATTCTGCCCCTTCTGGAAGTAATGGAAATAGTTTTCTAGGTCAGCAAAACCAATATCCTCCTCATTTGAGGCCGAACAACCTCCATATGCCACCTAATTTTGGACTGGATAATATGTACCCTCCGAATTCTCATAGTCATGGTTTTCGACCTATTCCTCCCAGACCTGATGGCCCTCGATTTTCTTCAGCTCCACCTACAAATGTGCCTGACATGGGTAAGCTAAATATCTCTGATTACCCCAATTATGCTCAAAATCCACCCAGGTTTCCACATCGAACTGGAGAAGAGTATAATAGACCAAGGTCTAGTGAGTCGAAGAATCCTAGCAGCTTTAATGGACCCCAAAAAGGCCATAATATGCAGGGGGGTGGCCAGCCGTTTCATCATGATTCCATGAACAACAGGTATCCTCGTGGTTCTGAATATATTCCTCCTTCATCCACCCCCAGTACAGCAAACAACATTCCCAGTAATGGTATCTGGGGAAGTCAAGGTTGTGCACCACCTTCTGAACATGTTCAAGGCCTTATTGGCGTTATTCTACTAGCCCTGAACTCCTTGAAAGTAGAGAAAATTATGCCTACTGAAGCAAACATTACTGATTGCATCCGTTATGGTGATCCAAAACACCGAAATACCGATGTAAGGAAGGCCTTGGATTATGCAATAGAGCAACATATGGTAGTGAAGCAGAACCTGGGTGTTGCACTTCCAATGTATATTGGCAAAAAGCAAAAATTATGGAAGTGTGTGAATCTTATAGGCGGTAATCTTAATAACTACTCTAAAGCTACATGGGAGAAGTTACAGAATTTTCTGAGTTCATCAGATGGACGATTGGCAATAATGGCTTCTCAATGCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NYN OHA

Protein Analysis

591

Amino Acids

64.46

Weight (kDa)

9.27

Isoelectric Point (pI)

43.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NYN PF01936 21 - 157 4.1e-29 NYN domain
DUF7625 PF24620 465 - 559 4.2e-46 Domain of unknown function (DUF7625)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011904)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62200
fragaria_vesca FvH4_1g26400 FvH4_1g26400 FvH4_1g26400
malus_domestica MD09G1292400.v1.1 MD17G1283700.v1.1
prunus_persica Prupe.3G003800_v2.0.a1
pyrus_communis pycom09g19710 pycom17g27960
rosa_chinensis RchiOBHm_Chr3g0486181
rosa_laevigata RLG00000023095
rosa_multiflora Rmu_sc0000372.1_g000001
rosa_roxburghii Rroxscaffold_6G00396010
rosa_rugosa Rorug03G0223900
rosa_samantha Rh3AG273800 Rh3BG309100 Rh3CG307300 Rh3DG303700
rosa_wichuraiana Rw3G024260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 260
AatII GACGTC 2 cut(s) 68, 117
Acc36I ACCTGC 2 cut(s) 260, 867
Acc65I GGTACC 1 cut(s) 548
AccB1I GGYRCC 2 cut(s) 97, 548
AccI GTMKAC 1 cut(s) 881
AccII CGCG 1 cut(s) 230
AccIII TCCGGA 1 cut(s) 362
AciI CCGC 8 cut(s) 38, 168, 186, 213, 447, 572, 575, 1671
AclWI GGATC 2 cut(s) 674, 1520
AcoI YGGCCR 1 cut(s) 1276
AcsI RAATTY 4 cut(s) 839, 904, 1030, 1717
AcuI CTGAAG 3 cut(s) 584, 1074, 1512
AcyI GRCGYC 2 cut(s) 65, 114
AfaI GTAC 5 cut(s) 50, 222, 550, 1022, 1357
AfiI CCNNNNNNNGG 8 cut(s) 369, 662, 876, 1004, 1118, 1253, 1379, 1551
AflIII ACRYGT 1 cut(s) 1420
AgsI TTSAA 2 cut(s) 1427, 1468
AjiI CACGTC 1 cut(s) 262
AjnI CCWGG 4 cut(s) 93, 898, 1166, 1602
AluBI AGCT 6 cut(s) 638, 830, 1094, 1126, 1236, 1697
AluI AGCT 6 cut(s) 638, 830, 1094, 1126, 1236, 1697
Alw21I GWGCWC 1 cut(s) 1408
Alw26I GTCTC 2 cut(s) 181, 360
Alw44I GTGCAC 1 cut(s) 1404
AlwI GGATC 2 cut(s) 674, 1520
AlwNI CAGNNNCTG 1 cut(s) 1603
Aor13HI TCCGGA 1 cut(s) 362
AoxI GGCC 7 cut(s) 169, 974, 1075, 1255, 1276, 1429, 1557
ApaLI GTGCAC 1 cut(s) 1404
ApeKI GCWGC 5 cut(s) 43, 461, 464, 577, 1233
ApoI RAATTY 4 cut(s) 839, 904, 1030, 1717
Asp700I GAANNNNTTC 3 cut(s) 597, 1332, 1422
Asp718I GGTACC 1 cut(s) 548
AspLEI GCGC 2 cut(s) 148, 232
AspS9I GGNCC 5 cut(s) 170, 506, 760, 1076, 1244
AsuHPI GGTGA 4 cut(s) 163, 536, 689, 1535
AvaII GGWCC 3 cut(s) 506, 760, 1244
BaeGI GKGCMC 2 cut(s) 102, 1408
BalI TGGCCA 1 cut(s) 1278
BanI GGYRCC 2 cut(s) 97, 548
BauI CACGAG 1 cut(s) 1317
BbsI GAAGAC 1 cut(s) 68
Bbv12I GWGCWC 1 cut(s) 1408
BbvI GCAGC 5 cut(s) 55, 448, 476, 589, 1245
BccI CCATC 4 cut(s) 131, 188, 1067, 1730
BceAI ACGGC 3 cut(s) 42, 208, 1267
BcgI CGANNNNNNTGC 2 cut(s) 229, 263
BciT130I CCWGG 4 cut(s) 95, 900, 1168, 1604
BciVI GTATCC 1 cut(s) 1323
BcoDI GTCTC 2 cut(s) 181, 360
BfaI CTAG 7 cut(s) 302, 852, 873, 941, 1212, 1230, 1451
BfmI CTRYAG 1 cut(s) 462
BfoI RGCGCY 1 cut(s) 149
BfuAI ACCTGC 2 cut(s) 260, 867
BfuI GTATCC 1 cut(s) 1323
BglI GCCNNNNNGGC 1 cut(s) 1437
BisI GCNGC 7 cut(s) 44, 169, 462, 465, 575, 578, 1234
BlsI GCNGC 7 cut(s) 45, 170, 463, 466, 576, 579, 1235
Bme1390I CCNGG 4 cut(s) 95, 900, 1168, 1604
Bme18I GGWCC 3 cut(s) 506, 760, 1244
BmgBI CACGTC 1 cut(s) 262
BmgT120I GGNCC 5 cut(s) 170, 506, 760, 1076, 1244
BmiI GGNNCC 6 cut(s) 99, 172, 508, 550, 761, 1246
BmrFI CCNGG 4 cut(s) 95, 900, 1168, 1604
BmrI ACTGGG 2 cut(s) 1347, 1368
BmsI GCATC 7 cut(s) 216, 255, 271, 452, 576, 749, 1521
BmuI ACTGGG 2 cut(s) 1347, 1368
BoxI GACNNNNGTC 1 cut(s) 1207
BpiI GAAGAC 1 cut(s) 68
BpmI CTGGAG 3 cut(s) 220, 522, 1206
Bsa29I ATCGAT 1 cut(s) 614
BsaAI YACGTR 1 cut(s) 52
BsaHI GRCGYC 2 cut(s) 65, 114
BsaJI CCNNGG 6 cut(s) 102, 898, 1166, 1205, 1560, 1603
BsaWI WCCGGW 1 cut(s) 362
BsaXI ACNNNNNCTCC 4 cut(s) 32, 62, 218, 248
Bsc4I CCNNNNNNNGG 8 cut(s) 369, 662, 876, 1004, 1118, 1253, 1379, 1551
Bse118I RCCGGY 1 cut(s) 242
Bse1I ACTGG 7 cut(s) 394, 552, 752, 1014, 1189, 1353, 1374
Bse3DI GCAATG 1 cut(s) 456
BseAI TCCGGA 1 cut(s) 362
BseBI CCWGG 4 cut(s) 95, 900, 1168, 1604
BseCI ATCGAT 1 cut(s) 614
BseDI CCNNGG 6 cut(s) 102, 898, 1166, 1205, 1560, 1603
BseGI GGATG 4 cut(s) 207, 443, 1343, 1512
BseLI CCNNNNNNNGG 8 cut(s) 369, 662, 876, 1004, 1118, 1253, 1379, 1551
BseMI GCAATG 1 cut(s) 456
BseMII CTCAG 1 cut(s) 1715
BseNI ACTGG 7 cut(s) 394, 552, 752, 1014, 1189, 1353, 1374
BseRI GAGGAG 1 cut(s) 954
BseSI GKGCMC 2 cut(s) 102, 1408
BseXI GCAGC 5 cut(s) 55, 448, 476, 589, 1245
BseYI CCCAGC 2 cut(s) 265, 638
Bsh1236I CGCG 1 cut(s) 230
BshFI GGCC 7 cut(s) 171, 976, 1077, 1257, 1278, 1431, 1559
BshNI GGYRCC 2 cut(s) 97, 548
BshVI ATCGAT 1 cut(s) 614
BsiHKAI GWGCWC 1 cut(s) 1408
BsiSI CCGG 2 cut(s) 243, 363
BslFI GGGAC 4 cut(s) 92, 248, 386, 492
BslI CCNNNNNNNGG 8 cut(s) 369, 662, 876, 1004, 1118, 1253, 1379, 1551
BsmAI GTCTC 2 cut(s) 181, 360
BsmBI CGTCTC 1 cut(s) 181
BsmFI GGGAC 4 cut(s) 92, 248, 386, 492
BsnI GGCC 7 cut(s) 171, 976, 1077, 1257, 1278, 1431, 1559
Bsp1286I GDGCHC 2 cut(s) 102, 1408
Bsp13I TCCGGA 1 cut(s) 362
Bsp1407I TGTACA 1 cut(s) 220
Bsp143I GATC 3 cut(s) 679, 799, 1525
BspACI CCGC 8 cut(s) 38, 168, 186, 213, 447, 572, 575, 1671
BspANI GGCC 7 cut(s) 171, 976, 1077, 1257, 1278, 1431, 1559
BspCNI CTCAG 1 cut(s) 1716
BspDI ATCGAT 1 cut(s) 614
BspEI TCCGGA 1 cut(s) 362
BspFNI CGCG 1 cut(s) 230
BspHI TCATGA 1 cut(s) 1291
BspLI GGNNCC 6 cut(s) 99, 172, 508, 550, 761, 1246
BspMAI CTGCAG 1 cut(s) 466
BspMI ACCTGC 2 cut(s) 260, 867
BspPI GGATC 2 cut(s) 674, 1520
BspT107I GGYRCC 2 cut(s) 97, 548
BsrDI GCAATG 1 cut(s) 456
BsrFI RCCGGY 1 cut(s) 242
BsrGI TGTACA 1 cut(s) 220
BsrI ACTGG 7 cut(s) 394, 552, 752, 1014, 1189, 1353, 1374
BssAI RCCGGY 1 cut(s) 242
BssECI CCNNGG 6 cut(s) 102, 898, 1166, 1205, 1560, 1603
BssMI GATC 3 cut(s) 679, 799, 1525
BssNI GRCGYC 2 cut(s) 65, 114
BssSI CACGAG 1 cut(s) 1317
BssT1I CCWWGG 3 cut(s) 102, 1205, 1560
Bst2BI CACGAG 1 cut(s) 1317
Bst2UI CCWGG 4 cut(s) 95, 900, 1168, 1604
Bst4CI ACNGT 1 cut(s) 665
Bst6I CTCTTC 1 cut(s) 1185
BstACI GRCGYC 2 cut(s) 65, 114
BstAPI GCANNNNNTGC 1 cut(s) 586
BstAUI TGTACA 1 cut(s) 220
BstBAI YACGTR 1 cut(s) 52
BstC8I GCNNGC 4 cut(s) 228, 540, 810, 1280
BstDEI CTNAG 1 cut(s) 1724
BstF5I GGATG 4 cut(s) 207, 443, 1343, 1512
BstFNI CGCG 1 cut(s) 230
BstH2I RGCGCY 1 cut(s) 149
BstHHI GCGC 2 cut(s) 148, 232
BstKTI GATC 3 cut(s) 682, 802, 1528
BstMAI GTCTC 2 cut(s) 181, 360
BstMBI GATC 3 cut(s) 679, 799, 1525
BstMWI GCNNNNNNNGC 5 cut(s) 35, 586, 814, 1437, 1754
BstNI CCWGG 4 cut(s) 95, 900, 1168, 1604
BstNSI RCATGY 1 cut(s) 1424
BstPAI GACNNNNGTC 1 cut(s) 1207
BstSCI CCNGG 4 cut(s) 93, 898, 1166, 1602
BstSFI CTRYAG 1 cut(s) 462
BstSLI GKGCMC 2 cut(s) 102, 1408
BstUI CGCG 1 cut(s) 230
BstV1I GCAGC 5 cut(s) 55, 448, 476, 589, 1245
BstV2I GAAGAC 1 cut(s) 68
Bsu15I ATCGAT 1 cut(s) 614
BsuI GTATCC 1 cut(s) 1323
BsuRI GGCC 7 cut(s) 171, 976, 1077, 1257, 1278, 1431, 1559
BsuTUI ATCGAT 1 cut(s) 614
BtgZI GCGATG 2 cut(s) 109, 232
BtrI CACGTC 1 cut(s) 262
BtsCI GGATG 4 cut(s) 207, 443, 1343, 1512
BtsIMutI CAGTG 1 cut(s) 75
BveI ACCTGC 2 cut(s) 260, 867
Cac8I GCNNGC 4 cut(s) 228, 540, 810, 1280
CaiI CAGNNNCTG 1 cut(s) 1603
CciI TCATGA 1 cut(s) 1291
CfoI GCGC 2 cut(s) 148, 232
Cfr10I RCCGGY 1 cut(s) 242
Cfr13I GGNCC 5 cut(s) 170, 506, 760, 1076, 1244
ClaI ATCGAT 1 cut(s) 614
CseI GACGC 1 cut(s) 814
Csp6I GTAC 5 cut(s) 49, 221, 549, 1021, 1356
CviAII CATG 8 cut(s) 34, 403, 1043, 1117, 1292, 1300, 1421, 1701
CviQI GTAC 5 cut(s) 49, 221, 549, 1021, 1356
DdeI CTNAG 1 cut(s) 1724
DpnI GATC 3 cut(s) 681, 801, 1527
DpnII GATC 3 cut(s) 679, 799, 1525
EaeI YGGCCR 1 cut(s) 1276
Eam1104I CTCTTC 1 cut(s) 1185
EarI CTCTTC 1 cut(s) 1185
EciI GGCGGA 2 cut(s) 53, 175
Eco130I CCWWGG 3 cut(s) 102, 1205, 1560
Eco147I AGGCCT 2 cut(s) 1431, 1559
Eco47I GGWCC 3 cut(s) 506, 760, 1244
Eco57I CTGAAG 3 cut(s) 584, 1074, 1512
EcoO109I RGGNCCY 1 cut(s) 506
EcoRI GAATTC 2 cut(s) 839, 1030
EcoRII CCWGG 4 cut(s) 93, 898, 1166, 1602
EcoT14I CCWWGG 3 cut(s) 102, 1205, 1560
ErhI CCWWGG 3 cut(s) 102, 1205, 1560
Esp3I CGTCTC 1 cut(s) 181
FaeI CATG 8 cut(s) 37, 406, 1046, 1120, 1295, 1303, 1424, 1704
FaqI GGGAC 4 cut(s) 92, 248, 386, 492
FatI CATG 8 cut(s) 33, 402, 1042, 1116, 1291, 1299, 1420, 1700
FauI CCCGC 2 cut(s) 220, 579
FauNDI CATATG 2 cut(s) 990, 1584
FblI GTMKAC 1 cut(s) 881
Fnu4HI GCNGC 7 cut(s) 44, 169, 462, 465, 575, 578, 1234
FokI GGATG 4 cut(s) 194, 430, 1330, 1499
Fsp4HI GCNGC 7 cut(s) 44, 169, 462, 465, 575, 578, 1234
FspBI CTAG 7 cut(s) 302, 852, 873, 941, 1212, 1230, 1451
GlaI GCGC 2 cut(s) 147, 231
GluI GCNGC 7 cut(s) 44, 169, 462, 465, 575, 578, 1234
GsaI CCCAGC 2 cut(s) 269, 642
GsuI CTGGAG 3 cut(s) 220, 522, 1206
HaeII RGCGCY 1 cut(s) 149
HaeIII GGCC 7 cut(s) 171, 976, 1077, 1257, 1278, 1431, 1559
HapII CCGG 2 cut(s) 243, 363
HgaI GACGC 1 cut(s) 814
HhaI GCGC 2 cut(s) 148, 232
Hin1I GRCGYC 2 cut(s) 65, 114
Hin1II CATG 8 cut(s) 37, 406, 1046, 1120, 1295, 1303, 1424, 1704
Hin6I GCGC 2 cut(s) 146, 230
HinP1I GCGC 2 cut(s) 146, 230
HinfI GANTC 7 cut(s) 298, 527, 859, 1217, 1225, 1295, 1660
HpaII CCGG 2 cut(s) 243, 363
HphI GGTGA 4 cut(s) 163, 536, 689, 1535
Hpy166II GTNNAC 4 cut(s) 16, 118, 882, 1406
Hpy188I TCNGA 9 cut(s) 603, 651, 804, 1029, 1138, 1327, 1417, 1725, 1735
Hpy188III TCNNGA 4 cut(s) 363, 735, 918, 1292
Hpy8I GTNNAC 4 cut(s) 16, 118, 882, 1406
Hpy99I CGWCG 1 cut(s) 116
HpyAV CCTTC 8 cut(s) 49, 431, 663, 666, 924, 1350, 1422, 1549
HpyCH4III ACNGT 1 cut(s) 665
HpyCH4IV ACGT 4 cut(s) 51, 65, 114, 261
HpyCH4V TGCA 9 cut(s) 345, 428, 464, 1267, 1406, 1512, 1571, 1613, 1767
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 586, 814, 1437, 1754
HpyF3I CTNAG 1 cut(s) 1724
HpySE526I ACGT 4 cut(s) 51, 65, 114, 261
Hsp92I GRCGYC 2 cut(s) 65, 114
Hsp92II CATG 8 cut(s) 37, 406, 1046, 1120, 1295, 1303, 1424, 1704
HspAI GCGC 2 cut(s) 146, 230
Kpn2I TCCGGA 1 cut(s) 362
KpnI GGTACC 1 cut(s) 552
Kzo9I GATC 3 cut(s) 679, 799, 1525
LmnI GCTCC 4 cut(s) 40, 343, 835, 1099
Lsp1109I GCAGC 5 cut(s) 55, 448, 476, 589, 1245
LweI GCATC 7 cut(s) 216, 255, 271, 452, 576, 749, 1521
MaeI CTAG 7 cut(s) 302, 852, 873, 941, 1212, 1230, 1451
MaeII ACGT 4 cut(s) 51, 65, 114, 261
MaeIII GTNAC 4 cut(s) 22, 287, 396, 1710
MalI GATC 3 cut(s) 681, 801, 1527
MboI GATC 3 cut(s) 679, 799, 1525
MboII GAAGA 8 cut(s) 73, 307, 420, 590, 886, 1080, 1202, 1234
MhlI GDGCHC 2 cut(s) 102, 1408
MlsI TGGCCA 1 cut(s) 1278
MluNI TGGCCA 1 cut(s) 1278
MlyI GAGTC 1 cut(s) 1226
Mox20I TGGCCA 1 cut(s) 1278
MroI TCCGGA 1 cut(s) 362
MroXI GAANNNNTTC 3 cut(s) 597, 1332, 1422
MscI TGGCCA 1 cut(s) 1278
MseI TTAA 4 cut(s) 561, 822, 1239, 1680
MslI CAYNNNNRTG 1 cut(s) 1041
Msp20I TGGCCA 1 cut(s) 1278
MspI CCGG 2 cut(s) 243, 363
MspR9I CCNGG 4 cut(s) 95, 900, 1168, 1604
MvaI CCWGG 4 cut(s) 95, 900, 1168, 1604
MvnI CGCG 1 cut(s) 230
MwoI GCNNNNNNNGC 5 cut(s) 35, 586, 814, 1437, 1754
NdeI CATATG 2 cut(s) 990, 1584
NdeII GATC 3 cut(s) 679, 799, 1525
NlaIII CATG 8 cut(s) 37, 406, 1046, 1120, 1295, 1303, 1424, 1704
NlaIV GGNNCC 6 cut(s) 99, 172, 508, 550, 761, 1246
NmeAIII GCCGAG 1 cut(s) 476
NmuCI GTSAC 2 cut(s) 22, 287
NspI RCATGY 1 cut(s) 1424
PagI TCATGA 1 cut(s) 1291
PaqCI CACCTGC 1 cut(s) 260
PceI AGGCCT 2 cut(s) 1431, 1559
PciI ACATGT 1 cut(s) 1420
PdmI GAANNNNTTC 3 cut(s) 597, 1332, 1422
PfeI GAWTC 6 cut(s) 298, 527, 859, 1225, 1295, 1660
PkrI GCNGC 7 cut(s) 45, 170, 463, 466, 576, 579, 1235
PleI GAGTC 1 cut(s) 1225
PpsI GAGTC 1 cut(s) 1225
Ppu21I YACGTR 1 cut(s) 52
PpuMI RGGWCCY 1 cut(s) 506
PscI ACATGT 1 cut(s) 1420
PshAI GACNNNNGTC 1 cut(s) 1207
Psp5II RGGWCCY 1 cut(s) 506
Psp6I CCWGG 4 cut(s) 93, 898, 1166, 1602
PspFI CCCAGC 2 cut(s) 265, 638
PspGI CCWGG 4 cut(s) 93, 898, 1166, 1602
PspN4I GGNNCC 6 cut(s) 99, 172, 508, 550, 761, 1246
PspPI GGNCC 5 cut(s) 170, 506, 760, 1076, 1244
PspPPI RGGWCCY 1 cut(s) 506
PstI CTGCAG 1 cut(s) 466
PstNI CAGNNNCTG 1 cut(s) 1603
RsaI GTAC 5 cut(s) 50, 222, 550, 1022, 1357
RsaNI GTAC 5 cut(s) 49, 221, 549, 1021, 1356
RseI CAYNNNNRTG 1 cut(s) 1041
SaqAI TTAA 4 cut(s) 561, 822, 1239, 1680
SatI GCNGC 7 cut(s) 44, 169, 462, 465, 575, 578, 1234
Sau3AI GATC 3 cut(s) 679, 799, 1525
Sau96I GGNCC 5 cut(s) 170, 506, 760, 1076, 1244
SchI GAGTC 1 cut(s) 1226
ScrFI CCNGG 4 cut(s) 95, 900, 1168, 1604
SduI GDGCHC 2 cut(s) 102, 1408
SfaNI GCATC 7 cut(s) 216, 255, 271, 452, 576, 749, 1521
SfcI CTRYAG 1 cut(s) 462
SinI GGWCC 3 cut(s) 506, 760, 1244
SmiMI CAYNNNNRTG 1 cut(s) 1041
SseBI AGGCCT 2 cut(s) 1431, 1559
SsiI CCGC 8 cut(s) 38, 168, 186, 213, 447, 572, 575, 1671
SspI AATATT 1 cut(s) 136
SspMI CTAG 7 cut(s) 302, 852, 873, 941, 1212, 1230, 1451
StuI AGGCCT 2 cut(s) 1431, 1559
StyD4I CCNGG 4 cut(s) 93, 898, 1166, 1602
StyI CCWWGG 3 cut(s) 102, 1205, 1560
TaaI ACNGT 1 cut(s) 665
TaiI ACGT 4 cut(s) 54, 68, 117, 264
TaqI TCGA 6 cut(s) 584, 614, 1051, 1081, 1180, 1220
TatI WGTACW 2 cut(s) 220, 1355
TauI GCSGC 2 cut(s) 171, 577
TfiI GAWTC 6 cut(s) 298, 527, 859, 1225, 1295, 1660
Tru1I TTAA 4 cut(s) 561, 822, 1239, 1680
Tru9I TTAA 4 cut(s) 561, 822, 1239, 1680
TscAI CASTG 1 cut(s) 75
TseFI GTSAC 2 cut(s) 22, 287
TseI GCWGC 5 cut(s) 43, 461, 464, 577, 1233
Tsp45I GTSAC 2 cut(s) 22, 287
TspDTI ATGAA 5 cut(s) 173, 1277, 1316, 1332, 1719
TspGWI ACGGA 2 cut(s) 33, 1505
TspRI CASTG 1 cut(s) 75
VneI GTGCAC 1 cut(s) 1404
VpaK11BI GGWCC 3 cut(s) 506, 760, 1244
XapI RAATTY 4 cut(s) 839, 904, 1030, 1717
XceI RCATGY 1 cut(s) 1424
XmiI GTMKAC 1 cut(s) 881
XmnI GAANNNNTTC 3 cut(s) 597, 1332, 1422
XspI CTAG 7 cut(s) 302, 852, 873, 941, 1212, 1230, 1451
ZraI GACGTC 2 cut(s) 66, 115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.