MD17G1283700.v1.1

NYN domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0011904
Physical Location & Seq
Forward (+)
34274798 .. 34279046
4249 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1283700.v1.1.491

Sequence Viewer

Length: 1926 bp
ATGCCTGTGGATGTGAACGGAAGCAGCACGGCGTCGGGGGCCGCCTCCATGGGTATGGCGGAGGCGCAGTACCAGAAGGCCAAAACGTCCGTGTGGTGGGACATAGAGAACTGCCAGGTTCCCAAGGTCTGCGATGTCCACGCCATCGCCCAGAACATCAGTTCCGCCCTCGTGAATATGAATTATTGTGGACCCGTCTCCATCAGCGCCTACGGCGACACGCATGGCATCCCTGCTTCAGTTCAGCAAGCCCTCTCCAGCACCGGCATCGCACTCAACCACGTCCCCGCCGGTGTGAAAGATGCAAGTGATAAGAAGATTCTAGTCGATATGTTGTTCTGGGCAGTAGATAACCCTGCACCAGCAAACTACCTGCTCATTTCTGGAGACAGGGATTTCTCCAATGCTCTACACCAGTTGCGCATGAGAAGATATAATATTCTTCTGGCACAACCACATAAGGCTTCCGCACCCCTCATCGCTGCAGCAAAAAGTGTATGGCTTTGGACGAGCCTCTCAGCTGGAGGGCCCCCACTTTCAAGCGGGGAATCATCTCAGCTTGCAAATGGTAACAATTCTTATAACTCTGAAATGCGGCAGCATTCCATGCCTGAAATAAACCCGCCTCCAGTTTATTTTGAACATCCTGTGGGAAATCAAAAGCCTTCTACCAACGGAAGGGCTGGTGATACTAAAAACAAGGGGAAAGTCAATCGGAAAAACCCAAATCAACCCTACACATCAAGAGTCTCAAGTATGCCAGTTGGGAACCAAGATGACAAGAATACTGATTACTCTTACCAGTCGGAACATACACAGGCAAATCAGTTTAAGAAAGCTCCACACGAATTATTTGGTTCTGGTGAGACTTCAGTCTCCACAAGTAGGTCCAGTCCCGTTTTCTTCCATGGAAATTCTGATCCTTCAGGCGGTAATGGCAATAATTTCCTAGGTCAACCAAATCAGTATCCTCCTTCTTCGAGGCCAAACAACTTCCACATGCAACCTAATTATTTTGGACCAGATACTATGCTCCCTCCTGATTCTCATAGTCATAGTTTTCGACCCATTCCTCCCAGACCTGATGGCCCTAGATTTTCTTCAGCCCCACCTACAAATGTGCCTGACATGAGTAACCTAAATATCCGTGAGTATAACAACTATGCTCAAAATCCACAAAGGTTCCCTCATCGAAATGGGGAAGAGTTTAGAAGACCAAGGTCTAGCGATTCACTGAATTCAGCTAGCTTAAATGTGCCTCATAAAGGCCATCATATGCAGAGTGGCCAGGTGTTTCATCATGATTCCATGAACAACAGATATCCTCATGGTTCTGAGTATCAGCCTCCTCAATCCTCCCCTGCTGTTGGAAACAACATACCTGGTAATGGTACTTGGGGAGCTCAAGGCTGCACACCACCATCTGAACATGTTCAAGGCCTTATTGGCGTTATTTTACTATCTTTGAACACCCTGAAAGTTGAAAAAATTATGCCGACTGAAGCAAACATTATCGATTGCATTCGTTATGGTGATCTGAAACACCGCAATACCGATGTAAGGAAGGCCTTGGATTACGCAATAGAGCAACATATGGTAGTGAAGCAGAGACTGGGTGCACTTCAGTTTTATGTTGGTAAGAATGAGAAATTATGGAAGTGTGTGAACCCTATAGGGGGCAATCTTAATCATTACTCTAAAGCAACATGGGATCGGATACAGAACTTTCTGAGTTCCTCAGATGGACGATCGGCATTAATGGCTTCTCAATGCAGATATGAGGCAGCTATTATTTTGAGAAAAGCATGCTCAGAAGAGCTTGCTTTGGGCAGTGTACTTCAGATCTTGAATATGGTAGTCAGCATGAAGAAATGGATCATTCATCATCAATCTGGATGGCAACCGATTACTATTACCCTAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NYN OHA

Protein Analysis

642

Amino Acids

70.44

Weight (kDa)

8.88

Isoelectric Point (pI)

45.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NYN PF01936 28 - 164 2.8e-29 NYN domain
DUF7625 PF24620 468 - 561 3.7e-48 Domain of unknown function (DUF7625)
OHA PF14418 589 - 638 1e-07 OST-HTH Associated domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011904)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62200
fragaria_vesca FvH4_1g26400 FvH4_1g26400 FvH4_1g26400
malus_domestica MD09G1292400.v1.1 MD17G1283700.v1.1
prunus_persica Prupe.3G003800_v2.0.a1
pyrus_communis pycom09g19710 pycom17g27960
rosa_chinensis RchiOBHm_Chr3g0486181
rosa_laevigata RLG00000023095
rosa_multiflora Rmu_sc0000372.1_g000001
rosa_roxburghii Rroxscaffold_6G00396010
rosa_rugosa Rorug03G0223900
rosa_samantha Rh3AG273800 Rh3BG309100 Rh3CG307300 Rh3DG303700
rosa_wichuraiana Rw3G024260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 582
Acc16I TGCGCA 1 cut(s) 422
Acc36I ACCTGC 1 cut(s) 381
AclWI GGATC 3 cut(s) 914, 1719, 1883
AcoI YGGCCR 1 cut(s) 1285
AcsI RAATTY 2 cut(s) 913, 1237
AcuI CTGAAG 7 cut(s) 222, 855, 909, 1086, 1521, 1607, 1823
AcyI GRCGYC 1 cut(s) 32
AfaI GTAC 3 cut(s) 71, 1393, 1836
AflIII ACRYGT 1 cut(s) 1429
AgsI TTSAA 6 cut(s) 540, 641, 1436, 1468, 1484, 1849
AjiI CACGTC 1 cut(s) 283
AjnI CCWGG 3 cut(s) 114, 1287, 1381
AloI GAACNNNNNNTCC 2 cut(s) 146, 178
AluBI AGCT 8 cut(s) 521, 559, 839, 1244, 1248, 1403, 1787, 1819
AluI AGCT 8 cut(s) 521, 559, 839, 1244, 1248, 1403, 1787, 1819
Alw21I GWGCWC 2 cut(s) 1405, 1621
Alw26I GTCTC 6 cut(s) 202, 381, 754, 860, 880, 1603
Alw44I GTGCAC 1 cut(s) 1617
AlwI GGATC 3 cut(s) 914, 1719, 1883
AlwNI CAGNNNCTG 1 cut(s) 1612
AoxI GGCC 9 cut(s) 39, 78, 527, 983, 1087, 1267, 1285, 1438, 1566
ApaI GGGCCC 1 cut(s) 531
ApaLI GTGCAC 1 cut(s) 1617
ApeKI GCWGC 6 cut(s) 24, 482, 485, 598, 1410, 1784
ApoI RAATTY 2 cut(s) 913, 1237
AseI ATTAAT 1 cut(s) 1757
Asp700I GAANNNNTTC 1 cut(s) 1431
AspA2I CCTAGG 1 cut(s) 949
AspLEI GCGC 3 cut(s) 67, 209, 423
AspS9I GGNCC 7 cut(s) 39, 191, 527, 528, 888, 1019, 1088
AsuHPI GGTGA 3 cut(s) 698, 875, 1544
AsuNHI GCTAGC 1 cut(s) 1244
AvaII GGWCC 3 cut(s) 191, 888, 1019
AvrII CCTAGG 1 cut(s) 949
BaeGI GKGCMC 2 cut(s) 531, 1621
BalI TGGCCA 1 cut(s) 1287
BanII GRGCYC 2 cut(s) 531, 1405
BauI CACGAG 1 cut(s) 170
BbsI GAAGAC 1 cut(s) 1219
Bbv12I GWGCWC 2 cut(s) 1405, 1621
BbvI GCAGC 6 cut(s) 36, 469, 497, 610, 1397, 1796
BccI CCATC 7 cut(s) 152, 209, 1079, 1278, 1429, 1736, 1890
BceAI ACGGC 2 cut(s) 45, 229
BcgI CGANNNNNNTGC 2 cut(s) 250, 284
BciT130I CCWGG 3 cut(s) 116, 1289, 1383
BciVI GTATCC 2 cut(s) 978, 1710
BcoDI GTCTC 6 cut(s) 202, 381, 754, 860, 880, 1603
BfaI CTAG 6 cut(s) 323, 950, 1092, 1224, 1245, 1919
BfmI CTRYAG 2 cut(s) 483, 1671
BfoI RGCGCY 1 cut(s) 210
BfuAI ACCTGC 1 cut(s) 381
BfuI GTATCC 2 cut(s) 978, 1710
BglI GCCNNNNNGGC 1 cut(s) 1446
BglII AGATCT 1 cut(s) 1842
BisI GCNGC 8 cut(s) 25, 42, 483, 486, 596, 599, 1411, 1785
BlnI CCTAGG 1 cut(s) 949
BlsI GCNGC 8 cut(s) 26, 43, 484, 487, 597, 600, 1412, 1786
Bme1390I CCNGG 3 cut(s) 116, 1289, 1383
Bme18I GGWCC 3 cut(s) 191, 888, 1019
BmgBI CACGTC 1 cut(s) 283
BmgT120I GGNCC 7 cut(s) 39, 191, 527, 528, 888, 1019, 1088
BmiI GGNNCC 7 cut(s) 40, 120, 193, 529, 530, 770, 1184
BmrFI CCNGG 3 cut(s) 116, 1289, 1383
BmrI ACTGGG 1 cut(s) 1622
BmsI GCATC 3 cut(s) 237, 276, 292
BmtI GCTAGC 1 cut(s) 1248
BmuI ACTGGG 1 cut(s) 1622
BoxI GACNNNNGTC 2 cut(s) 872, 1219
BpiI GAAGAC 1 cut(s) 1219
BpmI CTGGAG 4 cut(s) 241, 405, 543, 612
BpuEI CTTGAG 2 cut(s) 736, 1389
Bsa29I ATCGAT 1 cut(s) 1515
BsaHI GRCGYC 1 cut(s) 32
BsaJI CCNNGG 6 cut(s) 48, 123, 907, 949, 1217, 1569
BsaXI ACNNNNNCTCC 2 cut(s) 53, 83
Bse118I RCCGGY 2 cut(s) 263, 290
Bse1I ACTGG 6 cut(s) 415, 629, 761, 802, 891, 1617
BseBI CCWGG 3 cut(s) 116, 1289, 1383
BseCI ATCGAT 1 cut(s) 1515
BseDI CCNNGG 6 cut(s) 48, 123, 907, 949, 1217, 1569
BseGI GGATG 4 cut(s) 16, 228, 643, 1901
BseMII CTCAG 6 cut(s) 531, 569, 1326, 1721, 1752, 1824
BseNI ACTGG 6 cut(s) 415, 629, 761, 802, 891, 1617
BseRI GAGGAG 1 cut(s) 1338
BseSI GKGCMC 2 cut(s) 531, 1621
BseXI GCAGC 6 cut(s) 36, 469, 497, 610, 1397, 1796
BsgI GTGCAG 2 cut(s) 342, 1396
Bsh1285I CGRYCG 1 cut(s) 1751
BshFI GGCC 9 cut(s) 41, 80, 529, 985, 1089, 1269, 1287, 1440, 1568
BshVI ATCGAT 1 cut(s) 1515
BsiEI CGRYCG 1 cut(s) 1751
BsiHKAI GWGCWC 2 cut(s) 1405, 1621
BsiSI CCGG 2 cut(s) 264, 291
BslFI GGGAC 3 cut(s) 113, 269, 879
BsmAI GTCTC 6 cut(s) 202, 381, 754, 860, 880, 1603
BsmBI CGTCTC 1 cut(s) 202
BsmFI GGGAC 3 cut(s) 113, 269, 879
BsmI GAATGC 2 cut(s) 601, 1521
BsnI GGCC 9 cut(s) 41, 80, 529, 985, 1089, 1269, 1287, 1440, 1568
Bsp120I GGGCCC 1 cut(s) 527
Bsp1286I GDGCHC 3 cut(s) 531, 1405, 1621
Bsp143I GATC 6 cut(s) 919, 1534, 1711, 1748, 1842, 1875
Bsp19I CCATGG 2 cut(s) 48, 907
BspANI GGCC 9 cut(s) 41, 80, 529, 985, 1089, 1269, 1287, 1440, 1568
BspCNI CTCAG 6 cut(s) 530, 568, 1327, 1722, 1751, 1823
BspDI ATCGAT 1 cut(s) 1515
BspHI TCATGA 1 cut(s) 1300
BspLI GGNNCC 7 cut(s) 40, 120, 193, 529, 530, 770, 1184
BspMAI CTGCAG 1 cut(s) 487
BspMI ACCTGC 1 cut(s) 381
BspOI GCTAGC 1 cut(s) 1248
BspPI GGATC 3 cut(s) 914, 1719, 1883
BspQI GCTCTTC 1 cut(s) 1809
BsrFI RCCGGY 2 cut(s) 263, 290
BsrI ACTGG 6 cut(s) 415, 629, 761, 802, 891, 1617
BssAI RCCGGY 2 cut(s) 263, 290
BssECI CCNNGG 6 cut(s) 48, 123, 907, 949, 1217, 1569
BssMI GATC 6 cut(s) 919, 1534, 1711, 1748, 1842, 1875
BssNI GRCGYC 1 cut(s) 32
BssSI CACGAG 1 cut(s) 170
BssT1I CCWWGG 6 cut(s) 48, 123, 907, 949, 1217, 1569
Bst2BI CACGAG 1 cut(s) 170
Bst2UI CCWGG 3 cut(s) 116, 1289, 1383
Bst6I CTCTTC 2 cut(s) 1197, 1809
BstACI GRCGYC 1 cut(s) 32
BstAPI GCANNNNNTGC 1 cut(s) 607
BstC8I GCNNGC 5 cut(s) 249, 561, 1246, 1807, 1821
BstDEI CTNAG 6 cut(s) 517, 555, 1335, 1730, 1738, 1810
BstDSI CCRYGG 2 cut(s) 48, 907
BstENI CCTNNNNNAGG 1 cut(s) 1263
BstF5I GGATG 4 cut(s) 16, 228, 643, 1901
BstH2I RGCGCY 1 cut(s) 210
BstHHI GCGC 3 cut(s) 67, 209, 423
BstKTI GATC 6 cut(s) 922, 1537, 1714, 1751, 1845, 1878
BstMAI GTCTC 6 cut(s) 202, 381, 754, 860, 880, 1603
BstMBI GATC 6 cut(s) 919, 1534, 1711, 1748, 1842, 1875
BstMCI CGRYCG 1 cut(s) 1751
BstMWI GCNNNNNNNGC 6 cut(s) 38, 213, 607, 936, 1446, 1760
BstNI CCWGG 3 cut(s) 116, 1289, 1383
BstNSI RCATGY 3 cut(s) 1003, 1433, 1809
BstPAI GACNNNNGTC 2 cut(s) 872, 1219
BstSCI CCNGG 3 cut(s) 114, 1287, 1381
BstSFI CTRYAG 2 cut(s) 483, 1671
BstSLI GKGCMC 2 cut(s) 531, 1621
BstV1I GCAGC 6 cut(s) 36, 469, 497, 610, 1397, 1796
BstV2I GAAGAC 1 cut(s) 1219
BstX2I RGATCY 1 cut(s) 1842
BstXI CCANNNNNNTGG 1 cut(s) 55
BstYI RGATCY 1 cut(s) 1842
Bsu15I ATCGAT 1 cut(s) 1515
BsuI GTATCC 2 cut(s) 978, 1710
BsuRI GGCC 9 cut(s) 41, 80, 529, 985, 1089, 1269, 1287, 1440, 1568
BsuTUI ATCGAT 1 cut(s) 1515
BtgI CCRYGG 2 cut(s) 48, 907
BtgZI GCGATG 4 cut(s) 130, 147, 253, 463
BtrI CACGTC 1 cut(s) 283
BtsCI GGATG 4 cut(s) 16, 228, 643, 1901
BtsI GCAGTG 1 cut(s) 1837
BtsIMutI CAGTG 2 cut(s) 1232, 1837
BveI ACCTGC 1 cut(s) 381
Cac8I GCNNGC 5 cut(s) 249, 561, 1246, 1807, 1821
CaiI CAGNNNCTG 1 cut(s) 1612
CciI TCATGA 1 cut(s) 1300
CfoI GCGC 3 cut(s) 67, 209, 423
Cfr10I RCCGGY 2 cut(s) 263, 290
Cfr13I GGNCC 7 cut(s) 39, 191, 527, 528, 888, 1019, 1088
ClaI ATCGAT 1 cut(s) 1515
CseI GACGC 1 cut(s) 21
CsiI ACCWGGT 1 cut(s) 1381
Csp6I GTAC 3 cut(s) 70, 1392, 1835
CviQI GTAC 3 cut(s) 70, 1392, 1835
DdeI CTNAG 6 cut(s) 517, 555, 1335, 1730, 1738, 1810
DpnI GATC 6 cut(s) 921, 1536, 1713, 1750, 1844, 1877
DpnII GATC 6 cut(s) 919, 1534, 1711, 1748, 1842, 1875
EaeI YGGCCR 1 cut(s) 1285
Eam1104I CTCTTC 2 cut(s) 1197, 1809
EarI CTCTTC 2 cut(s) 1197, 1809
EciI GGCGGA 2 cut(s) 74, 154
Ecl136II GAGCTC 1 cut(s) 1403
Eco130I CCWWGG 6 cut(s) 48, 123, 907, 949, 1217, 1569
Eco147I AGGCCT 2 cut(s) 1440, 1568
Eco24I GRGCYC 2 cut(s) 531, 1405
Eco32I GATATC 1 cut(s) 1322
Eco47I GGWCC 3 cut(s) 191, 888, 1019
Eco53kI GAGCTC 1 cut(s) 1403
Eco57I CTGAAG 7 cut(s) 222, 855, 909, 1086, 1521, 1607, 1823
EcoICRI GAGCTC 1 cut(s) 1403
EcoNI CCTNNNNNAGG 1 cut(s) 1263
EcoO109I RGGNCCY 2 cut(s) 527, 528
EcoRI GAATTC 1 cut(s) 1237
EcoRII CCWGG 3 cut(s) 114, 1287, 1381
EcoRV GATATC 1 cut(s) 1322
EcoT14I CCWWGG 6 cut(s) 48, 123, 907, 949, 1217, 1569
EcoT38I GRGCYC 2 cut(s) 531, 1405
ErhI CCWWGG 6 cut(s) 48, 123, 907, 949, 1217, 1569
Esp3I CGTCTC 1 cut(s) 202
FaqI GGGAC 3 cut(s) 113, 269, 879
FauI CCCGC 3 cut(s) 295, 536, 630
FauNDI CATATG 2 cut(s) 1275, 1593
Fnu4HI GCNGC 8 cut(s) 25, 42, 483, 486, 596, 599, 1411, 1785
FokI GGATG 4 cut(s) 23, 215, 630, 1908
FriOI GRGCYC 2 cut(s) 531, 1405
Fsp4HI GCNGC 8 cut(s) 25, 42, 483, 486, 596, 599, 1411, 1785
FspBI CTAG 6 cut(s) 323, 950, 1092, 1224, 1245, 1919
FspI TGCGCA 1 cut(s) 422
GlaI GCGC 3 cut(s) 66, 208, 422
GluI GCNGC 8 cut(s) 25, 42, 483, 486, 596, 599, 1411, 1785
GsuI CTGGAG 4 cut(s) 241, 405, 543, 612
HaeII RGCGCY 1 cut(s) 210
HaeIII GGCC 9 cut(s) 41, 80, 529, 985, 1089, 1269, 1287, 1440, 1568
HapII CCGG 2 cut(s) 264, 291
HgaI GACGC 1 cut(s) 21
HhaI GCGC 3 cut(s) 67, 209, 423
Hin1I GRCGYC 1 cut(s) 32
Hin6I GCGC 3 cut(s) 65, 207, 421
HinP1I GCGC 3 cut(s) 65, 207, 421
HincII GTYRAC 1 cut(s) 956
HindII GTYRAC 1 cut(s) 956
HinfI GANTC 6 cut(s) 319, 548, 747, 1043, 1229, 1304
HpaII CCGG 2 cut(s) 264, 291
HphI GGTGA 3 cut(s) 698, 875, 1544
Hpy166II GTNNAC 7 cut(s) 16, 139, 191, 956, 1619, 1666, 1835
Hpy188III TCNNGA 7 cut(s) 172, 384, 744, 1040, 1301, 1846, 1893
Hpy8I GTNNAC 7 cut(s) 16, 139, 191, 956, 1619, 1666, 1835
Hpy99I CGWCG 1 cut(s) 37
HpyAV CCTTC 6 cut(s) 70, 672, 675, 933, 984, 1558
HpyCH4IV ACGT 2 cut(s) 86, 282
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 213, 607, 936, 1446, 1760
HpyF3I CTNAG 6 cut(s) 517, 555, 1335, 1730, 1738, 1810
HpySE526I ACGT 2 cut(s) 86, 282
Hsp92I GRCGYC 1 cut(s) 32
HspAI GCGC 3 cut(s) 65, 207, 421
Kzo9I GATC 6 cut(s) 919, 1534, 1711, 1748, 1842, 1875
LguI GCTCTTC 1 cut(s) 1809
LmnI GCTCC 3 cut(s) 844, 1038, 1400
Lsp1109I GCAGC 6 cut(s) 36, 469, 497, 610, 1397, 1796
LweI GCATC 3 cut(s) 237, 276, 292
MabI ACCWGGT 1 cut(s) 1381
MaeI CTAG 6 cut(s) 323, 950, 1092, 1224, 1245, 1919
MaeII ACGT 2 cut(s) 86, 282
MaeIII GTNAC 2 cut(s) 569, 1133
MalI GATC 6 cut(s) 921, 1536, 1713, 1750, 1844, 1877
MboI GATC 6 cut(s) 919, 1534, 1711, 1748, 1842, 1875
MflI RGATCY 1 cut(s) 1842
MhlI GDGCHC 3 cut(s) 531, 1405, 1621
MlsI TGGCCA 1 cut(s) 1287
MluCI AATT 9 cut(s) 181, 574, 848, 913, 943, 1009, 1237, 1488, 1649
MluNI TGGCCA 1 cut(s) 1287
MlyI GAGTC 1 cut(s) 756
MmeI TCCRAC 2 cut(s) 786, 1348
Mox20I TGGCCA 1 cut(s) 1287
MroXI GAANNNNTTC 1 cut(s) 1431
MscI TGGCCA 1 cut(s) 1287
MseI TTAA 4 cut(s) 831, 1250, 1686, 1757
MslI CAYNNNNRTG 2 cut(s) 53, 1194
Msp20I TGGCCA 1 cut(s) 1287
MspA1I CMGCKG 1 cut(s) 521
MspI CCGG 2 cut(s) 264, 291
MspR9I CCNGG 3 cut(s) 116, 1289, 1383
Mva1269I GAATGC 2 cut(s) 601, 1521
MvaI CCWGG 3 cut(s) 116, 1289, 1383
MwoI GCNNNNNNNGC 6 cut(s) 38, 213, 607, 936, 1446, 1760
NcoI CCATGG 2 cut(s) 48, 907
NdeI CATATG 2 cut(s) 1275, 1593
NdeII GATC 6 cut(s) 919, 1534, 1711, 1748, 1842, 1875
NheI GCTAGC 1 cut(s) 1244
NlaIV GGNNCC 7 cut(s) 40, 120, 193, 529, 530, 770, 1184
NsbI TGCGCA 1 cut(s) 422
NspI RCATGY 3 cut(s) 1003, 1433, 1809
PaeI GCATGC 1 cut(s) 1809
PagI TCATGA 1 cut(s) 1300
PceI AGGCCT 2 cut(s) 1440, 1568
PciI ACATGT 1 cut(s) 1429
PciSI GCTCTTC 1 cut(s) 1809
PctI GAATGC 2 cut(s) 601, 1521
PdmI GAANNNNTTC 1 cut(s) 1431
PfeI GAWTC 5 cut(s) 319, 548, 1043, 1229, 1304
PkrI GCNGC 8 cut(s) 26, 43, 484, 487, 597, 600, 1412, 1786
Ple19I CGATCG 1 cut(s) 1751
PleI GAGTC 1 cut(s) 755
PpsI GAGTC 1 cut(s) 755
PscI ACATGT 1 cut(s) 1429
PshAI GACNNNNGTC 2 cut(s) 872, 1219
PshBI ATTAAT 1 cut(s) 1757
PsiI TTATAA 1 cut(s) 582
Psp124BI GAGCTC 1 cut(s) 1405
Psp6I CCWGG 3 cut(s) 114, 1287, 1381
PspGI CCWGG 3 cut(s) 114, 1287, 1381
PspN4I GGNNCC 7 cut(s) 40, 120, 193, 529, 530, 770, 1184
PspOMI GGGCCC 1 cut(s) 527
PspPI GGNCC 7 cut(s) 39, 191, 527, 528, 888, 1019, 1088
PstI CTGCAG 1 cut(s) 487
PstNI CAGNNNCTG 1 cut(s) 1612
PsuI RGATCY 1 cut(s) 1842
PvuI CGATCG 1 cut(s) 1751
PvuII CAGCTG 1 cut(s) 521
RsaI GTAC 3 cut(s) 71, 1393, 1836
RsaNI GTAC 3 cut(s) 70, 1392, 1835
RseI CAYNNNNRTG 2 cut(s) 53, 1194
SacI GAGCTC 1 cut(s) 1405
SapI GCTCTTC 1 cut(s) 1809
SaqAI TTAA 4 cut(s) 831, 1250, 1686, 1757
SatI GCNGC 8 cut(s) 25, 42, 483, 486, 596, 599, 1411, 1785
Sau3AI GATC 6 cut(s) 919, 1534, 1711, 1748, 1842, 1875
Sau96I GGNCC 7 cut(s) 39, 191, 527, 528, 888, 1019, 1088
SchI GAGTC 1 cut(s) 756
ScrFI CCNGG 3 cut(s) 116, 1289, 1383
SduI GDGCHC 3 cut(s) 531, 1405, 1621
SexAI ACCWGGT 1 cut(s) 1381
SfaNI GCATC 3 cut(s) 237, 276, 292
SfcI CTRYAG 2 cut(s) 483, 1671
SgrAI CRCCGGYG 1 cut(s) 290
SinI GGWCC 3 cut(s) 191, 888, 1019
SmiMI CAYNNNNRTG 2 cut(s) 53, 1194
SmlI CTYRAG 2 cut(s) 751, 1404
SmoI CTYRAG 2 cut(s) 751, 1404
SphI GCATGC 1 cut(s) 1809
Sse9I AATT 9 cut(s) 181, 574, 848, 913, 943, 1009, 1237, 1488, 1649
SseBI AGGCCT 2 cut(s) 1440, 1568
SspI AATATT 1 cut(s) 439
SspMI CTAG 6 cut(s) 323, 950, 1092, 1224, 1245, 1919
SstI GAGCTC 1 cut(s) 1405
StuI AGGCCT 2 cut(s) 1440, 1568
StyD4I CCNGG 3 cut(s) 114, 1287, 1381
StyI CCWWGG 6 cut(s) 48, 123, 907, 949, 1217, 1569
TaiI ACGT 2 cut(s) 89, 285
TaqI TCGA 5 cut(s) 327, 980, 1063, 1192, 1515
TasI AATT 9 cut(s) 181, 574, 848, 913, 943, 1009, 1237, 1488, 1649
TatI WGTACW 1 cut(s) 1834
TauI GCSGC 2 cut(s) 44, 598
TfiI GAWTC 5 cut(s) 319, 548, 1043, 1229, 1304
Tru1I TTAA 4 cut(s) 831, 1250, 1686, 1757
Tru9I TTAA 4 cut(s) 831, 1250, 1686, 1757
TscAI CASTG 2 cut(s) 1239, 1837
TseI GCWGC 6 cut(s) 24, 482, 485, 598, 1410, 1784
TspDTI ATGAA 5 cut(s) 194, 1286, 1325, 1871, 1880
TspGWI ACGGA 4 cut(s) 33, 79, 690, 1136
TspRI CASTG 2 cut(s) 1239, 1837
VneI GTGCAC 1 cut(s) 1617
VpaK11BI GGWCC 3 cut(s) 191, 888, 1019
VspI ATTAAT 1 cut(s) 1757
XagI CCTNNNNNAGG 1 cut(s) 1263
XapI RAATTY 2 cut(s) 913, 1237
XceI RCATGY 3 cut(s) 1003, 1433, 1809
XmaJI CCTAGG 1 cut(s) 949
XmnI GAANNNNTTC 1 cut(s) 1431
XspI CTAG 6 cut(s) 323, 950, 1092, 1224, 1245, 1919
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.