pycom17g27960

NYN domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0011904
Physical Location & Seq
Forward (+)
26030911 .. 26033497
2587 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g27960.3

Sequence Viewer

Length: 1923 bp
ATGCCTGTGGATGTGAACGGAAGCAGCACGGCGTCGGGGGCCGCCTCCATGGGTATGGCGGAGGCGCAGTACCAGAAGGCCAAAACGTCGGTGTGGTGGGACATAGAGAACTGCCAGGTTCCCAAGGTCTGCGATGCCCACGCCATCGCACAGAACATCAGTTCCGCCCTCGTGGACATGAATTATTGTGGACCCGTCTCCATCTGCGCCTACGGCGACACGAATGGCATCCCTGCTTCTGTTCAGCAAGCCCTCTCCAGCACCGGCATCGCCCTCAACCACGTCCCCGCCGGTGTGAAAGATGCAAGTGATAAGAAGATTCTAGTCGATATGTTGTTCTGGGCAGTAGATAACGCTGCACCAGCAAACTACCTGCTCATTTCTGGAGACAGGGATTTCTCCAATGCTCTACACCAGTTGCGCATGAGAAGATATAATATTCTTCTAGCACAACCACATAAGGCTTCCGCACCCCTCATCGCTGCAGCAAAAAGTGTATGGCTTTGGACGAGCCTCTCAGCTGGAGGGCCCCCACTTTCAAGCAGGGAATCATCTCAGCTTGCAAATGGTAACAATTCTTATAACCCTGAAACGCGGCAGCATTCCATGCCTGAAATAAACCCGCCTCCAGTTTATTTTGAACATCCTGTGGGAAATCAAAAGCCTTCTACCAACGGAAGGGTTGGTGATACTAAAAACAAGGGGAAAGTCAATCGGAAAAACCCAAATCAACCCTACGTATCAAGAGTCTCAAGTATGCCAGTTGGGAACCAAGATGACAAGAATACTGATTACTCTTACCAGTCGGAACATACACAGGCAAATCAGTTTAAGAAAGCTCCACACGAATTATATGGTTCTGGTGAGACTTCAGTCTCCACTAGTAGGTCCACTCCCATTTTCTTCCATGGAAATTCTGATCCTTCAGGCGGTAATGGCAATAATTTCCTAGGTCAACCAAATCAGTATCCTCCTTCTTCAAGGCCAAACAACTTCCACATGCAACCTAATTATTTTGGACCAGATACCATCCTCCCTCCTAATTCTCATAGTCATGGTTTTCGACCTATTCCTCCCAGACCTGATGGCCCTAAATTTTCTTCAGCCCCACCTACAAATGTGCCTGACATGAGTAGGCTAAATATCTCTGAGTACAACAACTATGCTCAAAATCCACAAAGCTTCCCTCATCGAAATGGGGAAGAGTTTAGAAGACCAAGGTCTAGCGATTCACTGAATTCTGCTAGCTCAAATGTGCCTCGTAAAGGCCATCATATGCAGAGTGGCCAGGTGTTTCATCATGATTCCATGAACAACAGGTATCCTGGTTCTGAGTATCAGTCTCCTCAGTCCTCCCCTGCTGTTGGAAACAACATACCTGGTAATGGTACTTGGGGAGCTCAAGGCTGCACACCACCATCTGAACATGTTCAAGGCCTTATTGGCGTTATTTTACTATCTTTGAACACCCTGAAAGTTGAAAAAATTATGCCGACTGAAGCAAACATTATCGATTGCATTCGTTATGGTGATCTGAAACACCGCAATACTGATGTAAGGAAGGCATTGGATTACGCAATAGAGCAACATATGGTAGTGAAGCAGAGCCTGGGTGCACTTCAGTTTTATGTTGGTAAGAAAGAGAAATTATGGAAGTGTGTGAACCCTATAGGGGGCAATCTTAATCAGTACTCCAAAGCAACATGGGATCGGATACAGAACTTTCTGAGTTCCTCAGTTGGACAATCGGCATTAATGGCTTCTCAATGCAGATATGAGGCAGCTATTATTTTGAAAAAAGCATGCTCAGAAGAGCTTGCTTTGGGCAGCGTACTTCAGATCTTGAATATGGTAGTCAGCGTGAAGAAATGGATCATTCATCATCATTCTGGATGGCAACCGATTACTATTACCCTAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NYN OHA

Protein Analysis

641

Amino Acids

70.04

Weight (kDa)

8.9

Isoelectric Point (pI)

44.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011904)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62200
fragaria_vesca FvH4_1g26400 FvH4_1g26400 FvH4_1g26400
malus_domestica MD09G1292400.v1.1 MD17G1283700.v1.1
prunus_persica Prupe.3G003800_v2.0.a1
pyrus_communis pycom09g19710 pycom17g27960
rosa_chinensis RchiOBHm_Chr3g0486181
rosa_laevigata RLG00000023095
rosa_multiflora Rmu_sc0000372.1_g000001
rosa_roxburghii Rroxscaffold_6G00396010
rosa_rugosa Rorug03G0223900
rosa_samantha Rh3AG273800 Rh3BG309100 Rh3CG307300 Rh3DG303700
rosa_wichuraiana Rw3G024260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 582
Acc16I TGCGCA 1 cut(s) 422
Acc36I ACCTGC 1 cut(s) 381
AccII CGCG 1 cut(s) 595
AciI CCGC 9 cut(s) 42, 59, 165, 288, 468, 595, 623, 930, 1543
AclWI GGATC 3 cut(s) 914, 1716, 1880
AcoI YGGCCR 1 cut(s) 1285
AcsI RAATTY 3 cut(s) 913, 1094, 1237
AcuI CTGAAG 6 cut(s) 855, 909, 1086, 1518, 1604, 1820
AcyI GRCGYC 1 cut(s) 32
AfaI GTAC 5 cut(s) 71, 1154, 1390, 1691, 1833
AfiI CCNNNNNNNGG 8 cut(s) 678, 885, 929, 1265, 1364, 1385, 1672, 1673
AflIII ACRYGT 1 cut(s) 1426
AgsI TTSAA 8 cut(s) 540, 641, 981, 1433, 1465, 1481, 1795, 1846
AhlI ACTAGT 1 cut(s) 881
AjiI CACGTC 1 cut(s) 283
AjnI CCWGG 5 cut(s) 114, 1287, 1324, 1378, 1608
AloI GAACNNNNNNTCC 2 cut(s) 146, 178
AluBI AGCT 8 cut(s) 521, 559, 839, 1182, 1248, 1400, 1784, 1816
AluI AGCT 8 cut(s) 521, 559, 839, 1182, 1248, 1400, 1784, 1816
Alw21I GWGCWC 2 cut(s) 1402, 1618
Alw26I GTCTC 6 cut(s) 202, 381, 754, 860, 880, 1347
Alw44I GTGCAC 1 cut(s) 1614
AlwI GGATC 3 cut(s) 914, 1716, 1880
AlwNI CAGNNNCTG 1 cut(s) 1609
AoxI GGCC 8 cut(s) 39, 78, 527, 983, 1087, 1267, 1285, 1435
ApaI GGGCCC 1 cut(s) 531
ApaLI GTGCAC 1 cut(s) 1614
ApeKI GCWGC 8 cut(s) 24, 356, 482, 485, 598, 1407, 1781, 1827
ApoI RAATTY 3 cut(s) 913, 1094, 1237
AseI ATTAAT 1 cut(s) 1754
Asp700I GAANNNNTTC 1 cut(s) 1428
AspA2I CCTAGG 1 cut(s) 949
AspLEI GCGC 3 cut(s) 67, 209, 423
AspS9I GGNCC 7 cut(s) 39, 191, 527, 528, 888, 1019, 1088
AsuHPI GGTGA 3 cut(s) 698, 875, 1541
AsuNHI GCTAGC 1 cut(s) 1244
AvaII GGWCC 3 cut(s) 191, 888, 1019
AvrII CCTAGG 1 cut(s) 949
BaeGI GKGCMC 2 cut(s) 531, 1618
BalI TGGCCA 1 cut(s) 1287
BanII GRGCYC 2 cut(s) 531, 1402
BauI CACGAG 1 cut(s) 170
BbsI GAAGAC 1 cut(s) 1219
Bbv12I GWGCWC 2 cut(s) 1402, 1618
BbvI GCAGC 8 cut(s) 36, 343, 469, 497, 610, 1394, 1793, 1839
BccI CCATC 7 cut(s) 152, 209, 1037, 1079, 1278, 1426, 1887
BceAI ACGGC 2 cut(s) 45, 229
BcgI CGANNNNNNTGC 2 cut(s) 250, 284
BciT130I CCWGG 5 cut(s) 116, 1289, 1326, 1380, 1610
BciVI GTATCC 3 cut(s) 978, 1332, 1707
BcoDI GTCTC 6 cut(s) 202, 381, 754, 860, 880, 1347
BcuI ACTAGT 1 cut(s) 881
BfaI CTAG 7 cut(s) 323, 446, 882, 950, 1224, 1245, 1916
BfmI CTRYAG 2 cut(s) 483, 1668
BfuAI ACCTGC 1 cut(s) 381
BfuI GTATCC 3 cut(s) 978, 1332, 1707
BglI GCCNNNNNGGC 1 cut(s) 1443
BglII AGATCT 1 cut(s) 1839
BlnI CCTAGG 1 cut(s) 949
BmcAI AGTACT 1 cut(s) 1691
Bme1390I CCNGG 5 cut(s) 116, 1289, 1326, 1380, 1610
Bme18I GGWCC 3 cut(s) 191, 888, 1019
BmgBI CACGTC 1 cut(s) 283
BmgT120I GGNCC 7 cut(s) 39, 191, 527, 528, 888, 1019, 1088
BmiI GGNNCC 6 cut(s) 40, 120, 193, 529, 530, 770
BmrFI CCNGG 5 cut(s) 116, 1289, 1326, 1380, 1610
BmsI GCATC 4 cut(s) 124, 237, 276, 292
BmtI GCTAGC 1 cut(s) 1248
BoxI GACNNNNGTC 2 cut(s) 872, 1219
BpiI GAAGAC 1 cut(s) 1219
BpmI CTGGAG 4 cut(s) 241, 405, 543, 612
BpuEI CTTGAG 2 cut(s) 736, 1386
Bsa29I ATCGAT 1 cut(s) 1512
BsaAI YACGTR 1 cut(s) 739
BsaHI GRCGYC 1 cut(s) 32
BsaJI CCNNGG 6 cut(s) 48, 123, 907, 949, 1217, 1609
BsaXI ACNNNNNCTCC 2 cut(s) 53, 83
Bsc4I CCNNNNNNNGG 8 cut(s) 678, 885, 929, 1265, 1364, 1385, 1672, 1673
Bse118I RCCGGY 2 cut(s) 263, 290
Bse1I ACTGG 4 cut(s) 415, 629, 761, 802
BseBI CCWGG 5 cut(s) 116, 1289, 1326, 1380, 1610
BseCI ATCGAT 1 cut(s) 1512
BseDI CCNNGG 6 cut(s) 48, 123, 907, 949, 1217, 1609
BseGI GGATG 5 cut(s) 16, 228, 643, 1029, 1898
BseLI CCNNNNNNNGG 8 cut(s) 678, 885, 929, 1265, 1364, 1385, 1672, 1673
BseMII CTCAG 8 cut(s) 531, 569, 1140, 1323, 1361, 1718, 1749, 1821
BseNI ACTGG 4 cut(s) 415, 629, 761, 802
BseRI GAGGAG 1 cut(s) 1335
BseSI GKGCMC 2 cut(s) 531, 1618
BseXI GCAGC 8 cut(s) 36, 343, 469, 497, 610, 1394, 1793, 1839
BsgI GTGCAG 2 cut(s) 342, 1393
Bsh1236I CGCG 1 cut(s) 595
BshFI GGCC 8 cut(s) 41, 80, 529, 985, 1089, 1269, 1287, 1437
BshVI ATCGAT 1 cut(s) 1512
BsiHKAI GWGCWC 2 cut(s) 1402, 1618
BsiSI CCGG 2 cut(s) 264, 291
BslFI GGGAC 2 cut(s) 113, 269
BslI CCNNNNNNNGG 8 cut(s) 678, 885, 929, 1265, 1364, 1385, 1672, 1673
BsmAI GTCTC 6 cut(s) 202, 381, 754, 860, 880, 1347
BsmBI CGTCTC 1 cut(s) 202
BsmFI GGGAC 2 cut(s) 113, 269
BsmI GAATGC 2 cut(s) 601, 1518
BsnI GGCC 8 cut(s) 41, 80, 529, 985, 1089, 1269, 1287, 1437
Bsp120I GGGCCC 1 cut(s) 527
Bsp1286I GDGCHC 3 cut(s) 531, 1402, 1618
Bsp143I GATC 5 cut(s) 919, 1531, 1708, 1839, 1872
Bsp19I CCATGG 2 cut(s) 48, 907
BspACI CCGC 9 cut(s) 42, 59, 165, 288, 468, 595, 623, 930, 1543
BspANI GGCC 8 cut(s) 41, 80, 529, 985, 1089, 1269, 1287, 1437
BspCNI CTCAG 8 cut(s) 530, 568, 1141, 1324, 1360, 1719, 1748, 1820
BspDI ATCGAT 1 cut(s) 1512
BspFNI CGCG 1 cut(s) 595
BspHI TCATGA 1 cut(s) 1300
BspLI GGNNCC 6 cut(s) 40, 120, 193, 529, 530, 770
BspMAI CTGCAG 1 cut(s) 487
BspMI ACCTGC 1 cut(s) 381
BspOI GCTAGC 1 cut(s) 1248
BspPI GGATC 3 cut(s) 914, 1716, 1880
BspQI GCTCTTC 1 cut(s) 1806
BsrFI RCCGGY 2 cut(s) 263, 290
BsrI ACTGG 4 cut(s) 415, 629, 761, 802
BssAI RCCGGY 2 cut(s) 263, 290
BssECI CCNNGG 6 cut(s) 48, 123, 907, 949, 1217, 1609
BssMI GATC 5 cut(s) 919, 1531, 1708, 1839, 1872
BssNI GRCGYC 1 cut(s) 32
BssSI CACGAG 1 cut(s) 170
BssT1I CCWWGG 5 cut(s) 48, 123, 907, 949, 1217
Bst2BI CACGAG 1 cut(s) 170
Bst2UI CCWGG 5 cut(s) 116, 1289, 1326, 1380, 1610
Bst6I CTCTTC 2 cut(s) 1197, 1806
BstACI GRCGYC 1 cut(s) 32
BstAPI GCANNNNNTGC 1 cut(s) 607
BstBAI YACGTR 1 cut(s) 739
BstC8I GCNNGC 5 cut(s) 249, 561, 1246, 1804, 1818
BstDEI CTNAG 8 cut(s) 517, 555, 1149, 1332, 1347, 1727, 1735, 1807
BstDSI CCRYGG 2 cut(s) 48, 907
BstENI CCTNNNNNAGG 1 cut(s) 1263
BstF5I GGATG 5 cut(s) 16, 228, 643, 1029, 1898
BstFNI CGCG 1 cut(s) 595
BstHHI GCGC 3 cut(s) 67, 209, 423
BstKTI GATC 5 cut(s) 922, 1534, 1711, 1842, 1875
BstMAI GTCTC 6 cut(s) 202, 381, 754, 860, 880, 1347
BstMBI GATC 5 cut(s) 919, 1531, 1708, 1839, 1872
BstMWI GCNNNNNNNGC 7 cut(s) 38, 213, 362, 607, 936, 1443, 1757
BstNI CCWGG 5 cut(s) 116, 1289, 1326, 1380, 1610
BstNSI RCATGY 3 cut(s) 1003, 1430, 1806
BstPAI GACNNNNGTC 2 cut(s) 872, 1219
BstSCI CCNGG 5 cut(s) 114, 1287, 1324, 1378, 1608
BstSFI CTRYAG 2 cut(s) 483, 1668
BstSLI GKGCMC 2 cut(s) 531, 1618
BstSNI TACGTA 1 cut(s) 739
BstUI CGCG 1 cut(s) 595
BstV1I GCAGC 8 cut(s) 36, 343, 469, 497, 610, 1394, 1793, 1839
BstV2I GAAGAC 1 cut(s) 1219
BstX2I RGATCY 1 cut(s) 1839
BstXI CCANNNNNNTGG 1 cut(s) 55
BstYI RGATCY 1 cut(s) 1839
Bsu15I ATCGAT 1 cut(s) 1512
BsuI GTATCC 3 cut(s) 978, 1332, 1707
BsuRI GGCC 8 cut(s) 41, 80, 529, 985, 1089, 1269, 1287, 1437
BsuTUI ATCGAT 1 cut(s) 1512
BtgI CCRYGG 2 cut(s) 48, 907
BtgZI GCGATG 4 cut(s) 130, 147, 253, 463
BtrI CACGTC 1 cut(s) 283
BtsCI GGATG 5 cut(s) 16, 228, 643, 1029, 1898
BtsIMutI CAGTG 1 cut(s) 1232
BveI ACCTGC 1 cut(s) 381
Cac8I GCNNGC 5 cut(s) 249, 561, 1246, 1804, 1818
CaiI CAGNNNCTG 1 cut(s) 1609
CciI TCATGA 1 cut(s) 1300
CfoI GCGC 3 cut(s) 67, 209, 423
Cfr10I RCCGGY 2 cut(s) 263, 290
Cfr13I GGNCC 7 cut(s) 39, 191, 527, 528, 888, 1019, 1088
ClaI ATCGAT 1 cut(s) 1512
CseI GACGC 1 cut(s) 21
CsiI ACCWGGT 1 cut(s) 1378
Csp6I GTAC 5 cut(s) 70, 1153, 1389, 1690, 1832
CviQI GTAC 5 cut(s) 70, 1153, 1389, 1690, 1832
DdeI CTNAG 8 cut(s) 517, 555, 1149, 1332, 1347, 1727, 1735, 1807
DpnI GATC 5 cut(s) 921, 1533, 1710, 1841, 1874
DpnII GATC 5 cut(s) 919, 1531, 1708, 1839, 1872
EaeI YGGCCR 1 cut(s) 1285
Eam1104I CTCTTC 2 cut(s) 1197, 1806
EarI CTCTTC 2 cut(s) 1197, 1806
EciI GGCGGA 2 cut(s) 74, 154
Ecl136II GAGCTC 1 cut(s) 1400
Eco105I TACGTA 1 cut(s) 739
Eco130I CCWWGG 5 cut(s) 48, 123, 907, 949, 1217
Eco147I AGGCCT 1 cut(s) 1437
Eco24I GRGCYC 2 cut(s) 531, 1402
Eco47I GGWCC 3 cut(s) 191, 888, 1019
Eco53kI GAGCTC 1 cut(s) 1400
Eco57I CTGAAG 6 cut(s) 855, 909, 1086, 1518, 1604, 1820
EcoICRI GAGCTC 1 cut(s) 1400
EcoNI CCTNNNNNAGG 1 cut(s) 1263
EcoO109I RGGNCCY 2 cut(s) 527, 528
EcoRI GAATTC 1 cut(s) 1237
EcoRII CCWGG 5 cut(s) 114, 1287, 1324, 1378, 1608
EcoT14I CCWWGG 5 cut(s) 48, 123, 907, 949, 1217
EcoT38I GRGCYC 2 cut(s) 531, 1402
ErhI CCWWGG 5 cut(s) 48, 123, 907, 949, 1217
Esp3I CGTCTC 1 cut(s) 202
FaqI GGGAC 2 cut(s) 113, 269
FauI CCCGC 2 cut(s) 295, 630
FauNDI CATATG 2 cut(s) 1275, 1590
FokI GGATG 5 cut(s) 23, 215, 630, 1016, 1905
FriOI GRGCYC 2 cut(s) 531, 1402
FspBI CTAG 7 cut(s) 323, 446, 882, 950, 1224, 1245, 1916
FspI TGCGCA 1 cut(s) 422
GlaI GCGC 3 cut(s) 66, 208, 422
GsuI CTGGAG 4 cut(s) 241, 405, 543, 612
HaeIII GGCC 8 cut(s) 41, 80, 529, 985, 1089, 1269, 1287, 1437
HapII CCGG 2 cut(s) 264, 291
HgaI GACGC 1 cut(s) 21
HhaI GCGC 3 cut(s) 67, 209, 423
Hin1I GRCGYC 1 cut(s) 32
Hin6I GCGC 3 cut(s) 65, 207, 421
HinP1I GCGC 3 cut(s) 65, 207, 421
HincII GTYRAC 1 cut(s) 956
HindII GTYRAC 1 cut(s) 956
HindIII AAGCTT 1 cut(s) 1180
HinfI GANTC 5 cut(s) 319, 548, 747, 1229, 1304
HpaII CCGG 2 cut(s) 264, 291
HphI GGTGA 3 cut(s) 698, 875, 1541
Hpy166II GTNNAC 7 cut(s) 16, 175, 191, 891, 956, 1616, 1663
Hpy188III TCNNGA 5 cut(s) 384, 744, 1301, 1843, 1890
Hpy8I GTNNAC 7 cut(s) 16, 175, 191, 891, 956, 1616, 1663
Hpy99I CGWCG 2 cut(s) 37, 91
HpyAV CCTTC 6 cut(s) 70, 672, 675, 933, 984, 1555
HpyCH4IV ACGT 3 cut(s) 86, 282, 738
HpyF10VI GCNNNNNNNGC 7 cut(s) 38, 213, 362, 607, 936, 1443, 1757
HpyF3I CTNAG 8 cut(s) 517, 555, 1149, 1332, 1347, 1727, 1735, 1807
HpySE526I ACGT 3 cut(s) 86, 282, 738
Hsp92I GRCGYC 1 cut(s) 32
HspAI GCGC 3 cut(s) 65, 207, 421
Kzo9I GATC 5 cut(s) 919, 1531, 1708, 1839, 1872
LguI GCTCTTC 1 cut(s) 1806
LmnI GCTCC 2 cut(s) 844, 1397
Lsp1109I GCAGC 8 cut(s) 36, 343, 469, 497, 610, 1394, 1793, 1839
LweI GCATC 4 cut(s) 124, 237, 276, 292
MabI ACCWGGT 1 cut(s) 1378
MaeI CTAG 7 cut(s) 323, 446, 882, 950, 1224, 1245, 1916
MaeII ACGT 3 cut(s) 86, 282, 738
MaeIII GTNAC 1 cut(s) 569
MalI GATC 5 cut(s) 921, 1533, 1710, 1841, 1874
MboI GATC 5 cut(s) 919, 1531, 1708, 1839, 1872
MflI RGATCY 1 cut(s) 1839
MhlI GDGCHC 3 cut(s) 531, 1402, 1618
MlsI TGGCCA 1 cut(s) 1287
MluNI TGGCCA 1 cut(s) 1287
MlyI GAGTC 1 cut(s) 756
MmeI TCCRAC 3 cut(s) 786, 1345, 1720
Mox20I TGGCCA 1 cut(s) 1287
MroXI GAANNNNTTC 1 cut(s) 1428
MscI TGGCCA 1 cut(s) 1287
MseI TTAA 3 cut(s) 831, 1683, 1754
MslI CAYNNNNRTG 3 cut(s) 53, 1053, 1194
Msp20I TGGCCA 1 cut(s) 1287
MspA1I CMGCKG 1 cut(s) 521
MspI CCGG 2 cut(s) 264, 291
MspR9I CCNGG 5 cut(s) 116, 1289, 1326, 1380, 1610
Mva1269I GAATGC 2 cut(s) 601, 1518
MvaI CCWGG 5 cut(s) 116, 1289, 1326, 1380, 1610
MvnI CGCG 1 cut(s) 595
MwoI GCNNNNNNNGC 7 cut(s) 38, 213, 362, 607, 936, 1443, 1757
NcoI CCATGG 2 cut(s) 48, 907
NdeI CATATG 2 cut(s) 1275, 1590
NdeII GATC 5 cut(s) 919, 1531, 1708, 1839, 1872
NheI GCTAGC 1 cut(s) 1244
NlaIV GGNNCC 6 cut(s) 40, 120, 193, 529, 530, 770
NsbI TGCGCA 1 cut(s) 422
NspI RCATGY 3 cut(s) 1003, 1430, 1806
PaeI GCATGC 1 cut(s) 1806
PagI TCATGA 1 cut(s) 1300
PceI AGGCCT 1 cut(s) 1437
PciI ACATGT 1 cut(s) 1426
PciSI GCTCTTC 1 cut(s) 1806
PctI GAATGC 2 cut(s) 601, 1518
PdmI GAANNNNTTC 1 cut(s) 1428
PfeI GAWTC 4 cut(s) 319, 548, 1229, 1304
PleI GAGTC 1 cut(s) 755
PpsI GAGTC 1 cut(s) 755
Ppu21I YACGTR 1 cut(s) 739
PscI ACATGT 1 cut(s) 1426
PshAI GACNNNNGTC 2 cut(s) 872, 1219
PshBI ATTAAT 1 cut(s) 1754
PsiI TTATAA 1 cut(s) 582
Psp124BI GAGCTC 1 cut(s) 1402
Psp6I CCWGG 5 cut(s) 114, 1287, 1324, 1378, 1608
PspGI CCWGG 5 cut(s) 114, 1287, 1324, 1378, 1608
PspN4I GGNNCC 6 cut(s) 40, 120, 193, 529, 530, 770
PspOMI GGGCCC 1 cut(s) 527
PspPI GGNCC 7 cut(s) 39, 191, 527, 528, 888, 1019, 1088
PstI CTGCAG 1 cut(s) 487
PstNI CAGNNNCTG 1 cut(s) 1609
PsuI RGATCY 1 cut(s) 1839
PvuII CAGCTG 1 cut(s) 521
RsaI GTAC 5 cut(s) 71, 1154, 1390, 1691, 1833
RsaNI GTAC 5 cut(s) 70, 1153, 1389, 1690, 1832
RseI CAYNNNNRTG 3 cut(s) 53, 1053, 1194
SacI GAGCTC 1 cut(s) 1402
SapI GCTCTTC 1 cut(s) 1806
SaqAI TTAA 3 cut(s) 831, 1683, 1754
Sau3AI GATC 5 cut(s) 919, 1531, 1708, 1839, 1872
Sau96I GGNCC 7 cut(s) 39, 191, 527, 528, 888, 1019, 1088
ScaI AGTACT 1 cut(s) 1691
SchI GAGTC 1 cut(s) 756
ScrFI CCNGG 5 cut(s) 116, 1289, 1326, 1380, 1610
SduI GDGCHC 3 cut(s) 531, 1402, 1618
SexAI ACCWGGT 1 cut(s) 1378
SfaNI GCATC 4 cut(s) 124, 237, 276, 292
SfcI CTRYAG 2 cut(s) 483, 1668
SgrAI CRCCGGYG 1 cut(s) 290
SinI GGWCC 3 cut(s) 191, 888, 1019
SmiMI CAYNNNNRTG 3 cut(s) 53, 1053, 1194
SmlI CTYRAG 2 cut(s) 751, 1401
SmoI CTYRAG 2 cut(s) 751, 1401
SnaBI TACGTA 1 cut(s) 739
SpeI ACTAGT 1 cut(s) 881
SphI GCATGC 1 cut(s) 1806
SseBI AGGCCT 1 cut(s) 1437
SsiI CCGC 9 cut(s) 42, 59, 165, 288, 468, 595, 623, 930, 1543
SspI AATATT 1 cut(s) 439
SspMI CTAG 7 cut(s) 323, 446, 882, 950, 1224, 1245, 1916
SstI GAGCTC 1 cut(s) 1402
StuI AGGCCT 1 cut(s) 1437
StyD4I CCNGG 5 cut(s) 114, 1287, 1324, 1378, 1608
StyI CCWWGG 5 cut(s) 48, 123, 907, 949, 1217
TaiI ACGT 3 cut(s) 89, 285, 741
TaqI TCGA 4 cut(s) 327, 1063, 1192, 1512
TatI WGTACW 2 cut(s) 1152, 1689
TauI GCSGC 2 cut(s) 44, 598
TfiI GAWTC 4 cut(s) 319, 548, 1229, 1304
Tru1I TTAA 3 cut(s) 831, 1683, 1754
Tru9I TTAA 3 cut(s) 831, 1683, 1754
TscAI CASTG 1 cut(s) 1239
TseI GCWGC 8 cut(s) 24, 356, 482, 485, 598, 1407, 1781, 1827
TspDTI ATGAA 4 cut(s) 194, 1286, 1325, 1868
TspGWI ACGGA 2 cut(s) 33, 690
TspRI CASTG 1 cut(s) 1239
VneI GTGCAC 1 cut(s) 1614
VpaK11BI GGWCC 3 cut(s) 191, 888, 1019
VspI ATTAAT 1 cut(s) 1754
XagI CCTNNNNNAGG 1 cut(s) 1263
XapI RAATTY 3 cut(s) 913, 1094, 1237
XceI RCATGY 3 cut(s) 1003, 1430, 1806
XmaJI CCTAGG 1 cut(s) 949
XmnI GAANNNNTTC 1 cut(s) 1428
XspI CTAG 7 cut(s) 323, 446, 882, 950, 1224, 1245, 1916
ZrmI AGTACT 1 cut(s) 1691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.