pycom09g19710

NYN domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0011904
Physical Location & Seq
Forward (+)
20554418 .. 20557157
2740 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g19710.3

Sequence Viewer

Length: 1968 bp
ATGCGTGGGGATGTGAACGGAAGCACCACTGCGGCGGGGGCGCCCTCCATGGGTATGGCGGAGGCACAGTACGTGAACGCCAAAACGTCGGTGTGGTGGGACATAGAGAACTGCCAGGTCCCTAAAGTCTGCGATGTCCACGCCATCGCCCAGAACATCAGTTCCGCCCTCGTGAAGATGAATTATTGTGGGGCCGTCTCCATCTCCGCCTACGGCGACACCAACGGCATCCCTGCTTCTGTTCAGCAGGCCCTCTCCAGCACCGGCATCTCCCTCAACCACGTCCCTGCCGGTGTGAAAGATGCAAGTGATAAGAAGATTCTAGTCGATATGTTGTTCTGGGCAGTAGATAACCCTGCCCCAGCAAACTACCTGCTTATTTCTGGAGACAGGGATTTCTCCAATGCTCTACACCAGTTGCGCATGAGAAGATACAACATTCTTCTGGCACAACCACAAAAAGCTTCCGCAGCCCTCGTCGCTGCAGCAAAGAGTGTATGGCTTTGGACGAGCCTCTCAGCTGGAGGGCCCCCACTTTCAAGTGGGGAATCATCTCAGCTTGCAAATGGTAACAATTCTTATAACCCTGAAATGACACAGCATTCAATGCCTGAAACGTTCAATATAAACCCGCCTCCAGTTTATTATGAACATCCTTTGGGAAATCAAAAGCCTTCCACCAGCGGAAGGGTTGGTGATACTAAAAACAAGGGAAAATTCAATCGGAAAAACCCAAATCAACCCAACATATCAAGAGTCTCAAGTATGCCAGTTGGGAACCAAGATGACAAGAATACTGATTACTCTTACCAGTCAGAACATACACATGCAAAGCAGTTCAAGAAAGCTCCACACGAATTCTTTGGTTCTGGTGACACTCCAGTCTCCAATAGTAGGTCCACTCCCAATTTCTTCCATGGAAATTCTGATCCTTCAGGCAGTGATGGAAATAGTTTCCTAGGTCAACCAAACCAGTATCCTTCTCCTCAGAGGCCGAACAACTTCCACATGCAACCGAATTTTGGACCAGATAGTAAGCTCCCTCCTAATTCCCATAGTTATGGTTTACGACCTATGCCTCCCAGACCTGGTGGCCCTAGATTTACTTCAGCCCCACCTACAAATGTGCCTGATATGAGTAAGTTAAATATCTCTGAGTACAACAATTATGCTCAAAATCCACAAAGGTTCCCTCATCGAAATGGGGAAGAGTCTAGTAGACCAAGGTCTAGCGATTCACTGAATTCAGCTAGCTTAAATGTGCCTTATAAAGGCCATAATATGCAGAGTGGCCAGGCGTTTCATCATGATTCTATGAACAACAGGTATCCTCGTGGTTCCGAGTACCGGCCTCCTCAATCCTCCCCTGCTGCTGGAAACAACATACCTAGCAATGGTACTTGGGGAGCTCAAGGCTGCACACCACCATCTGAATATGTTCAAGGCCTTATTGGCGTTATTTTACTAGCTTTGAACACCCTGAAAGTTGAAAAAATTATGCCGACTGAAGCAAACATTACCGATTGCATTCGTTATGGTGATCTGAAACACCGCAATACCGATGTAAGGAAGGCCTTGGATTACGCAATAGAGCAACAGATGGTGGTCAAGCAGAGCCTGGGTGCACTTCAGTTGTATGTTGGTAAGAATGAGAAATTATGGAAGTGTGTGAACCCTATAGGGGGTAATCTTAATCAGTACACTAAAGCAACATGGGAACGAATACAGAATTTTCTGAGTTCCTCATATGGACGATCGGCAATAATGGCCTCTCAATGCAGATATGAAGCAGCTATTATTTTGAGGAAAGCATGCTCTGAAGAGCTTGCTTTGGGCAATGTACTTCAGATCTTGAATATGATAGTCAGCATGAAGAAATGGATCATTCATCATCAATCTGGATGGCAACCGATTACTTTTACCCTTGAAGAGACTAACGCTGAAACAGCTGCTGAAACTGGTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NYN OHA

Protein Analysis

656

Amino Acids

71.68

Weight (kDa)

8.93

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011904)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62200
fragaria_vesca FvH4_1g26400 FvH4_1g26400 FvH4_1g26400
malus_domestica MD09G1292400.v1.1 MD17G1283700.v1.1
prunus_persica Prupe.3G003800_v2.0.a1
pyrus_communis pycom09g19710 pycom17g27960
rosa_chinensis RchiOBHm_Chr3g0486181
rosa_laevigata RLG00000023095
rosa_multiflora Rmu_sc0000372.1_g000001
rosa_roxburghii Rroxscaffold_6G00396010
rosa_rugosa Rorug03G0223900
rosa_samantha Rh3AG273800 Rh3BG309100 Rh3CG307300 Rh3DG303700
rosa_wichuraiana Rw3G024260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 582, 1269
AasI GACNNNNNNGTC 1 cut(s) 881
Acc16I TGCGCA 1 cut(s) 422
Acc36I ACCTGC 1 cut(s) 381
AccB1I GGYRCC 1 cut(s) 40
AccI GTMKAC 1 cut(s) 1219
AciI CCGC 9 cut(s) 32, 35, 59, 165, 207, 468, 632, 684, 1552
AclI AACGTT 1 cut(s) 617
AclWI GGATC 2 cut(s) 923, 1889
AcoI YGGCCR 1 cut(s) 1291
AcsI RAATTY 6 cut(s) 716, 857, 922, 1018, 1243, 1729
AcuI CTGAAG 6 cut(s) 918, 1092, 1527, 1613, 1829, 1839
AcyI GRCGYC 1 cut(s) 41
AfaI GTAC 7 cut(s) 71, 1160, 1346, 1399, 1700, 1842, 1963
AjiI CACGTC 1 cut(s) 283
AjnI CCWGG 4 cut(s) 114, 1087, 1293, 1617
AloI GAACNNNNNNTCC 2 cut(s) 146, 178
Alw21I GWGCWC 2 cut(s) 1411, 1627
Alw26I GTCTC 5 cut(s) 202, 381, 763, 889, 1925
Alw44I GTGCAC 1 cut(s) 1623
AlwI GGATC 2 cut(s) 923, 1889
AlwNI CAGNNNCTG 2 cut(s) 1618, 1952
ApaI GGGCCC 1 cut(s) 531
ApaLI GTGCAC 1 cut(s) 1623
ApeKI GCWGC 7 cut(s) 470, 482, 485, 1370, 1416, 1790, 1949
ApoI RAATTY 6 cut(s) 716, 857, 922, 1018, 1243, 1729
Asp700I GAANNNNTTC 2 cut(s) 1001, 1437
AspA2I CCTAGG 1 cut(s) 958
AspLEI GCGC 2 cut(s) 43, 423
AspS9I GGNCC 8 cut(s) 118, 192, 250, 527, 528, 897, 1025, 1094
AsuHPI GGTGA 3 cut(s) 707, 884, 1550
AsuNHI GCTAGC 1 cut(s) 1250
AvaII GGWCC 3 cut(s) 118, 897, 1025
AvrII CCTAGG 1 cut(s) 958
BaeGI GKGCMC 2 cut(s) 531, 1627
BalI TGGCCA 1 cut(s) 1293
BanI GGYRCC 1 cut(s) 40
BanII GRGCYC 2 cut(s) 531, 1411
BauI CACGAG 2 cut(s) 170, 1332
Bbv12I GWGCWC 2 cut(s) 1411, 1627
BbvI GCAGC 7 cut(s) 469, 482, 497, 1357, 1403, 1802, 1936
BccI CCATC 6 cut(s) 152, 209, 938, 1435, 1594, 1896
BceAI ACGGC 3 cut(s) 179, 229, 241
BciT130I CCWGG 4 cut(s) 116, 1089, 1295, 1619
BciVI GTATCC 2 cut(s) 987, 1338
BcoDI GTCTC 5 cut(s) 202, 381, 763, 889, 1925
BfaI CTAG 8 cut(s) 323, 959, 1098, 1215, 1230, 1251, 1389, 1466
BfmI CTRYAG 2 cut(s) 483, 1677
BfoI RGCGCY 1 cut(s) 44
BfuAI ACCTGC 1 cut(s) 381
BfuI GTATCC 2 cut(s) 987, 1338
BglI GCCNNNNNGGC 1 cut(s) 1452
BglII AGATCT 1 cut(s) 1848
BisI GCNGC 8 cut(s) 33, 471, 483, 486, 1371, 1417, 1791, 1950
BlnI CCTAGG 1 cut(s) 958
BlsI GCNGC 8 cut(s) 34, 472, 484, 487, 1372, 1418, 1792, 1951
Bme1390I CCNGG 4 cut(s) 116, 1089, 1295, 1619
Bme18I GGWCC 3 cut(s) 118, 897, 1025
BmgBI CACGTC 1 cut(s) 283
BmgT120I GGNCC 8 cut(s) 118, 192, 250, 527, 528, 897, 1025, 1094
BmiI GGNNCC 8 cut(s) 42, 120, 193, 529, 530, 779, 1190, 1339
BmrFI CCNGG 4 cut(s) 116, 1089, 1295, 1619
BmsI GCATC 3 cut(s) 237, 276, 292
BmtI GCTAGC 1 cut(s) 1254
BoxI GACNNNNGTC 1 cut(s) 1225
BpmI CTGGAG 5 cut(s) 241, 405, 543, 621, 864
BpuEI CTTGAG 2 cut(s) 745, 1395
BsaAI YACGTR 1 cut(s) 73
BsaHI GRCGYC 1 cut(s) 41
BsaJI CCNNGG 6 cut(s) 48, 916, 958, 1223, 1575, 1618
BsaXI ACNNNNNCTCC 2 cut(s) 53, 83
Bse118I RCCGGY 3 cut(s) 263, 290, 1347
Bse1I ACTGG 7 cut(s) 415, 638, 770, 811, 881, 973, 1963
Bse3DI GCAATG 2 cut(s) 1399, 1843
BseBI CCWGG 4 cut(s) 116, 1089, 1295, 1619
BseDI CCNNGG 6 cut(s) 48, 916, 958, 1223, 1575, 1618
BseGI GGATG 4 cut(s) 16, 228, 652, 1907
BseMI GCAATG 2 cut(s) 1399, 1843
BseMII CTCAG 5 cut(s) 531, 569, 1001, 1146, 1727
BseNI ACTGG 7 cut(s) 415, 638, 770, 811, 881, 973, 1963
BseRI GAGGAG 2 cut(s) 975, 1344
BseSI GKGCMC 2 cut(s) 531, 1627
BseXI GCAGC 7 cut(s) 469, 482, 497, 1357, 1403, 1802, 1936
BseYI CCCAGC 1 cut(s) 361
BsgI GTGCAG 1 cut(s) 1402
Bsh1285I CGRYCG 1 cut(s) 1757
BshNI GGYRCC 1 cut(s) 40
BsiEI CGRYCG 1 cut(s) 1757
BsiHKAI GWGCWC 2 cut(s) 1411, 1627
BsiSI CCGG 3 cut(s) 264, 291, 1348
BslFI GGGAC 3 cut(s) 104, 113, 269
BsmAI GTCTC 5 cut(s) 202, 381, 763, 889, 1925
BsmBI CGTCTC 1 cut(s) 202
BsmFI GGGAC 3 cut(s) 104, 113, 269
BsmI GAATGC 2 cut(s) 601, 1527
Bsp120I GGGCCC 1 cut(s) 527
Bsp1286I GDGCHC 3 cut(s) 531, 1411, 1627
Bsp143I GATC 5 cut(s) 928, 1540, 1754, 1848, 1881
Bsp19I CCATGG 2 cut(s) 48, 916
BspACI CCGC 9 cut(s) 32, 35, 59, 165, 207, 468, 632, 684, 1552
BspCNI CTCAG 5 cut(s) 530, 568, 1000, 1147, 1728
BspHI TCATGA 1 cut(s) 1306
BspLI GGNNCC 8 cut(s) 42, 120, 193, 529, 530, 779, 1190, 1339
BspMAI CTGCAG 1 cut(s) 487
BspMI ACCTGC 1 cut(s) 381
BspOI GCTAGC 1 cut(s) 1254
BspPI GGATC 2 cut(s) 923, 1889
BspQI GCTCTTC 1 cut(s) 1815
BspT107I GGYRCC 1 cut(s) 40
BsrDI GCAATG 2 cut(s) 1399, 1843
BsrFI RCCGGY 3 cut(s) 263, 290, 1347
BsrI ACTGG 7 cut(s) 415, 638, 770, 811, 881, 973, 1963
BssAI RCCGGY 3 cut(s) 263, 290, 1347
BssECI CCNNGG 6 cut(s) 48, 916, 958, 1223, 1575, 1618
BssMI GATC 5 cut(s) 928, 1540, 1754, 1848, 1881
BssNI GRCGYC 1 cut(s) 41
BssSI CACGAG 2 cut(s) 170, 1332
BssT1I CCWWGG 5 cut(s) 48, 916, 958, 1223, 1575
Bst2BI CACGAG 2 cut(s) 170, 1332
Bst2UI CCWGG 4 cut(s) 116, 1089, 1295, 1619
Bst4CI ACNGT 1 cut(s) 69
Bst6I CTCTTC 3 cut(s) 1203, 1815, 1923
BstACI GRCGYC 1 cut(s) 41
BstAPI GCANNNNNTGC 1 cut(s) 607
BstBAI YACGTR 1 cut(s) 73
BstC8I GCNNGC 5 cut(s) 249, 561, 1252, 1813, 1827
BstDEI CTNAG 5 cut(s) 517, 555, 987, 1155, 1736
BstDSI CCRYGG 2 cut(s) 48, 916
BstENI CCTNNNNNAGG 1 cut(s) 1269
BstF5I GGATG 4 cut(s) 16, 228, 652, 1907
BstH2I RGCGCY 1 cut(s) 44
BstHHI GCGC 2 cut(s) 43, 423
BstKTI GATC 5 cut(s) 931, 1543, 1757, 1851, 1884
BstMAI GTCTC 5 cut(s) 202, 381, 763, 889, 1925
BstMBI GATC 5 cut(s) 928, 1540, 1754, 1848, 1881
BstMCI CGRYCG 1 cut(s) 1757
BstMWI GCNNNNNNNGC 7 cut(s) 38, 470, 479, 607, 1452, 1766, 1946
BstNI CCWGG 4 cut(s) 116, 1089, 1295, 1619
BstNSI RCATGY 3 cut(s) 830, 1012, 1815
BstPAI GACNNNNGTC 1 cut(s) 1225
BstSCI CCNGG 4 cut(s) 114, 1087, 1293, 1617
BstSFI CTRYAG 2 cut(s) 483, 1677
BstSLI GKGCMC 2 cut(s) 531, 1627
BstV1I GCAGC 7 cut(s) 469, 482, 497, 1357, 1403, 1802, 1936
BstX2I RGATCY 1 cut(s) 1848
BstXI CCANNNNNNTGG 2 cut(s) 55, 1061
BstYI RGATCY 1 cut(s) 1848
BsuI GTATCC 2 cut(s) 987, 1338
BtgI CCRYGG 2 cut(s) 48, 916
BtgZI GCGATG 2 cut(s) 130, 147
BtrI CACGTC 1 cut(s) 283
BtsCI GGATG 4 cut(s) 16, 228, 652, 1907
BtsI GCAGTG 2 cut(s) 27, 946
BtsIMutI CAGTG 3 cut(s) 27, 946, 1238
BveI ACCTGC 1 cut(s) 381
Cac8I GCNNGC 5 cut(s) 249, 561, 1252, 1813, 1827
CaiI CAGNNNCTG 2 cut(s) 1618, 1952
CciI TCATGA 1 cut(s) 1306
CfoI GCGC 2 cut(s) 43, 423
Cfr10I RCCGGY 3 cut(s) 263, 290, 1347
Cfr13I GGNCC 8 cut(s) 118, 192, 250, 527, 528, 897, 1025, 1094
CsiI ACCWGGT 1 cut(s) 1087
Csp6I GTAC 7 cut(s) 70, 1159, 1345, 1398, 1699, 1841, 1962
CviAII CATG 9 cut(s) 49, 424, 827, 917, 1009, 1307, 1713, 1812, 1870
CviQI GTAC 7 cut(s) 70, 1159, 1345, 1398, 1699, 1841, 1962
DdeI CTNAG 5 cut(s) 517, 555, 987, 1155, 1736
DinI GGCGCC 1 cut(s) 42
DpnI GATC 5 cut(s) 930, 1542, 1756, 1850, 1883
DpnII GATC 5 cut(s) 928, 1540, 1754, 1848, 1881
DrdI GACNNNNNNGTC 1 cut(s) 881
DseDI GACNNNNNNGTC 1 cut(s) 881
EaeI YGGCCR 1 cut(s) 1291
Eam1104I CTCTTC 3 cut(s) 1203, 1815, 1923
EarI CTCTTC 3 cut(s) 1203, 1815, 1923
EciI GGCGGA 3 cut(s) 74, 154, 196
Ecl136II GAGCTC 1 cut(s) 1409
Eco130I CCWWGG 5 cut(s) 48, 916, 958, 1223, 1575
Eco147I AGGCCT 2 cut(s) 1446, 1574
Eco24I GRGCYC 2 cut(s) 531, 1411
Eco47I GGWCC 3 cut(s) 118, 897, 1025
Eco53kI GAGCTC 1 cut(s) 1409
Eco57I CTGAAG 6 cut(s) 918, 1092, 1527, 1613, 1829, 1839
EcoICRI GAGCTC 1 cut(s) 1409
EcoNI CCTNNNNNAGG 1 cut(s) 1269
EcoO109I RGGNCCY 4 cut(s) 118, 250, 527, 528
EcoRI GAATTC 2 cut(s) 857, 1243
EcoRII CCWGG 4 cut(s) 114, 1087, 1293, 1617
EcoT14I CCWWGG 5 cut(s) 48, 916, 958, 1223, 1575
EcoT38I GRGCYC 2 cut(s) 531, 1411
EgeI GGCGCC 1 cut(s) 42
EheI GGCGCC 1 cut(s) 42
ErhI CCWWGG 5 cut(s) 48, 916, 958, 1223, 1575
Esp3I CGTCTC 1 cut(s) 202
FaeI CATG 9 cut(s) 52, 427, 830, 920, 1012, 1310, 1716, 1815, 1873
FaqI GGGAC 3 cut(s) 104, 113, 269
FatI CATG 9 cut(s) 48, 423, 826, 916, 1008, 1306, 1712, 1811, 1869
FauI CCCGC 2 cut(s) 28, 639
FauNDI CATATG 1 cut(s) 1747
FblI GTMKAC 1 cut(s) 1219
Fnu4HI GCNGC 8 cut(s) 33, 471, 483, 486, 1371, 1417, 1791, 1950
FokI GGATG 4 cut(s) 23, 215, 639, 1914
FriOI GRGCYC 2 cut(s) 531, 1411
Fsp4HI GCNGC 8 cut(s) 33, 471, 483, 486, 1371, 1417, 1791, 1950
FspBI CTAG 8 cut(s) 323, 959, 1098, 1215, 1230, 1251, 1389, 1466
FspI TGCGCA 1 cut(s) 422
GlaI GCGC 2 cut(s) 42, 422
GluI GCNGC 8 cut(s) 33, 471, 483, 486, 1371, 1417, 1791, 1950
GsaI CCCAGC 1 cut(s) 365
GsuI CTGGAG 5 cut(s) 241, 405, 543, 621, 864
HaeII RGCGCY 1 cut(s) 44
HapII CCGG 3 cut(s) 264, 291, 1348
HhaI GCGC 2 cut(s) 43, 423
Hin1I GRCGYC 1 cut(s) 41
Hin1II CATG 9 cut(s) 52, 427, 830, 920, 1012, 1310, 1716, 1815, 1873
Hin6I GCGC 2 cut(s) 41, 421
HinP1I GCGC 2 cut(s) 41, 421
HincII GTYRAC 1 cut(s) 965
HindII GTYRAC 1 cut(s) 965
HindIII AAGCTT 1 cut(s) 462
HinfI GANTC 6 cut(s) 319, 548, 756, 1211, 1235, 1310
HpaII CCGG 3 cut(s) 264, 291, 1348
HphI GGTGA 3 cut(s) 707, 884, 1550
Hpy188III TCNNGA 7 cut(s) 172, 384, 753, 841, 1307, 1852, 1899
Hpy99I CGWCG 2 cut(s) 91, 482
HpyAV CCTTC 5 cut(s) 681, 684, 942, 990, 1564
HpyCH4III ACNGT 1 cut(s) 69
HpyCH4IV ACGT 4 cut(s) 72, 86, 282, 617
HpyF10VI GCNNNNNNNGC 7 cut(s) 38, 470, 479, 607, 1452, 1766, 1946
HpyF3I CTNAG 5 cut(s) 517, 555, 987, 1155, 1736
HpySE526I ACGT 4 cut(s) 72, 86, 282, 617
Hsp92I GRCGYC 1 cut(s) 41
Hsp92II CATG 9 cut(s) 52, 427, 830, 920, 1012, 1310, 1716, 1815, 1873
HspAI GCGC 2 cut(s) 41, 421
KasI GGCGCC 1 cut(s) 40
Kzo9I GATC 5 cut(s) 928, 1540, 1754, 1848, 1881
LguI GCTCTTC 1 cut(s) 1815
LmnI GCTCC 3 cut(s) 853, 1044, 1406
Lsp1109I GCAGC 7 cut(s) 469, 482, 497, 1357, 1403, 1802, 1936
LweI GCATC 3 cut(s) 237, 276, 292
MabI ACCWGGT 1 cut(s) 1087
MaeI CTAG 8 cut(s) 323, 959, 1098, 1215, 1230, 1251, 1389, 1466
MaeII ACGT 4 cut(s) 72, 86, 282, 617
MaeIII GTNAC 2 cut(s) 569, 872
MalI GATC 5 cut(s) 930, 1542, 1756, 1850, 1883
MboI GATC 5 cut(s) 928, 1540, 1754, 1848, 1881
MboII GAAGA 9 cut(s) 187, 328, 434, 441, 904, 1220, 1832, 1885, 1940
MflI RGATCY 1 cut(s) 1848
MhlI GDGCHC 3 cut(s) 531, 1411, 1627
MlsI TGGCCA 1 cut(s) 1293
MluNI TGGCCA 1 cut(s) 1293
Mly113I GGCGCC 1 cut(s) 41
MlyI GAGTC 2 cut(s) 765, 1220
Mox20I TGGCCA 1 cut(s) 1293
MroXI GAANNNNTTC 2 cut(s) 1001, 1437
MscI TGGCCA 1 cut(s) 1293
MseI TTAA 3 cut(s) 1145, 1256, 1692
MslI CAYNNNNRTG 4 cut(s) 53, 825, 1059, 1200
Msp20I TGGCCA 1 cut(s) 1293
MspA1I CMGCKG 3 cut(s) 521, 684, 1949
MspI CCGG 3 cut(s) 264, 291, 1348
MspR9I CCNGG 4 cut(s) 116, 1089, 1295, 1619
Mva1269I GAATGC 2 cut(s) 601, 1527
MvaI CCWGG 4 cut(s) 116, 1089, 1295, 1619
MwoI GCNNNNNNNGC 7 cut(s) 38, 470, 479, 607, 1452, 1766, 1946
NarI GGCGCC 1 cut(s) 41
NcoI CCATGG 2 cut(s) 48, 916
NdeI CATATG 1 cut(s) 1747
NdeII GATC 5 cut(s) 928, 1540, 1754, 1848, 1881
NheI GCTAGC 1 cut(s) 1250
NlaIII CATG 9 cut(s) 52, 427, 830, 920, 1012, 1310, 1716, 1815, 1873
NlaIV GGNNCC 8 cut(s) 42, 120, 193, 529, 530, 779, 1190, 1339
NmuCI GTSAC 1 cut(s) 872
NsbI TGCGCA 1 cut(s) 422
NspI RCATGY 3 cut(s) 830, 1012, 1815
PaeI GCATGC 1 cut(s) 1815
PagI TCATGA 1 cut(s) 1306
PceI AGGCCT 2 cut(s) 1446, 1574
PciSI GCTCTTC 1 cut(s) 1815
PctI GAATGC 2 cut(s) 601, 1527
PdmI GAANNNNTTC 2 cut(s) 1001, 1437
PfeI GAWTC 4 cut(s) 319, 548, 1235, 1310
PkrI GCNGC 8 cut(s) 34, 472, 484, 487, 1372, 1418, 1792, 1951
Ple19I CGATCG 1 cut(s) 1757
PleI GAGTC 2 cut(s) 764, 1219
PluTI GGCGCC 1 cut(s) 44
PpsI GAGTC 2 cut(s) 764, 1219
Ppu21I YACGTR 1 cut(s) 73
PpuMI RGGWCCY 1 cut(s) 118
PshAI GACNNNNGTC 1 cut(s) 1225
PsiI TTATAA 2 cut(s) 582, 1269
Psp124BI GAGCTC 1 cut(s) 1411
Psp1406I AACGTT 1 cut(s) 617
Psp5II RGGWCCY 1 cut(s) 118
Psp6I CCWGG 4 cut(s) 114, 1087, 1293, 1617
PspFI CCCAGC 1 cut(s) 361
PspGI CCWGG 4 cut(s) 114, 1087, 1293, 1617
PspN4I GGNNCC 8 cut(s) 42, 120, 193, 529, 530, 779, 1190, 1339
PspOMI GGGCCC 1 cut(s) 527
PspPI GGNCC 8 cut(s) 118, 192, 250, 527, 528, 897, 1025, 1094
PspPPI RGGWCCY 1 cut(s) 118
PstI CTGCAG 1 cut(s) 487
PstNI CAGNNNCTG 2 cut(s) 1618, 1952
PsuI RGATCY 1 cut(s) 1848
PvuI CGATCG 1 cut(s) 1757
PvuII CAGCTG 2 cut(s) 521, 1949
RsaI GTAC 7 cut(s) 71, 1160, 1346, 1399, 1700, 1842, 1963
RsaNI GTAC 7 cut(s) 70, 1159, 1345, 1398, 1699, 1841, 1962
RseI CAYNNNNRTG 4 cut(s) 53, 825, 1059, 1200
SacI GAGCTC 1 cut(s) 1411
SapI GCTCTTC 1 cut(s) 1815
SaqAI TTAA 3 cut(s) 1145, 1256, 1692
SatI GCNGC 8 cut(s) 33, 471, 483, 486, 1371, 1417, 1791, 1950
Sau3AI GATC 5 cut(s) 928, 1540, 1754, 1848, 1881
Sau96I GGNCC 8 cut(s) 118, 192, 250, 527, 528, 897, 1025, 1094
SchI GAGTC 2 cut(s) 765, 1220
ScrFI CCNGG 4 cut(s) 116, 1089, 1295, 1619
SduI GDGCHC 3 cut(s) 531, 1411, 1627
SexAI ACCWGGT 1 cut(s) 1087
SfaNI GCATC 3 cut(s) 237, 276, 292
SfcI CTRYAG 2 cut(s) 483, 1677
SfoI GGCGCC 1 cut(s) 42
SinI GGWCC 3 cut(s) 118, 897, 1025
SmiMI CAYNNNNRTG 4 cut(s) 53, 825, 1059, 1200
SmlI CTYRAG 2 cut(s) 760, 1410
SmoI CTYRAG 2 cut(s) 760, 1410
SphI GCATGC 1 cut(s) 1815
SseBI AGGCCT 2 cut(s) 1446, 1574
SsiI CCGC 9 cut(s) 32, 35, 59, 165, 207, 468, 632, 684, 1552
SspDI GGCGCC 1 cut(s) 40
SspMI CTAG 8 cut(s) 323, 959, 1098, 1215, 1230, 1251, 1389, 1466
SstI GAGCTC 1 cut(s) 1411
StuI AGGCCT 2 cut(s) 1446, 1574
StyD4I CCNGG 4 cut(s) 114, 1087, 1293, 1617
StyI CCWWGG 5 cut(s) 48, 916, 958, 1223, 1575
TaaI ACNGT 1 cut(s) 69
TaiI ACGT 4 cut(s) 75, 89, 285, 620
TaqI TCGA 2 cut(s) 327, 1198
TatI WGTACW 3 cut(s) 1158, 1698, 1840
TauI GCSGC 1 cut(s) 35
TfiI GAWTC 4 cut(s) 319, 548, 1235, 1310
Tru1I TTAA 3 cut(s) 1145, 1256, 1692
Tru9I TTAA 3 cut(s) 1145, 1256, 1692
TscAI CASTG 3 cut(s) 34, 946, 1245
TseFI GTSAC 1 cut(s) 872
TseI GCWGC 7 cut(s) 470, 482, 485, 1370, 1416, 1790, 1949
Tsp45I GTSAC 1 cut(s) 872
TspDTI ATGAA 7 cut(s) 194, 663, 1292, 1331, 1800, 1877, 1886
TspGWI ACGGA 1 cut(s) 33
TspRI CASTG 3 cut(s) 34, 946, 1245
VneI GTGCAC 1 cut(s) 1623
VpaK11BI GGWCC 3 cut(s) 118, 897, 1025
XagI CCTNNNNNAGG 1 cut(s) 1269
XapI RAATTY 6 cut(s) 716, 857, 922, 1018, 1243, 1729
XceI RCATGY 3 cut(s) 830, 1012, 1815
XmaJI CCTAGG 1 cut(s) 958
XmiI GTMKAC 1 cut(s) 1219
XmnI GAANNNNTTC 2 cut(s) 1001, 1437
XspI CTAG 8 cut(s) 323, 959, 1098, 1215, 1230, 1251, 1389, 1466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.