Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0002056

Physical Location & Seq

Genomic Coordinates Reverse (-)

20459331 .. 20468625

Gene Structure 9295 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0223900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2250 bp

ATGGAAAAACTAAATTCATCTGGGTTGGCAAGAACCAAGTCCGATCAACTGGTGGAGTCTGTGGTAGCTGCCTTCAAGTCACCGACGTCAAGTGAAGCCGCTGCTGTGGCGGCAGAGGGCAGCAGCGGAACCCTCTCAAGGAAGTCAAGCAGGCGCATGATTGGAGCTTCGCCAGGGCGTGGCAGTGGCAGTGGCAGTGCCAAAGGTAGCGCACACATAAGGAAGACTAGGAGTGCTCAAATGAAGTTTGAGCTGGATGAATTGAGCAGCGGCGCCGCTTTAAGCAGAGCCTCGAGCGCTAGCTTGGGGTTCTCATTCTCCTTCACCGGCTTTACTGTGCCCGCTGATGAAATTGCGGACTCAAAGCCTTTTAGCGACGATGATGAAATTCCCGAAGATCTTGAAGCCGGCAACCGAAAACCAAAGTTTCAGACCGAACCCACCCTGCCGATTTATCTCAAGTTCACAGATGTGACATACAAGGTCATTCTCAAAGGAATGAGGACAAATGAAGAGAAGGACATCTTGAATGGGATCACTGGTTCAGTAAACCCCGGCGAAGTTCTTGCCCTGATGGGACCATCAGGAAGTGGAAAGACCACACTCCTTAATCTGCTTGGAGGCAGGATAGCCAGAGGCAATGTCAGTGGTTCAATTAACTACAATGACCAGACATATTCCAAGTACCTAAAGAGAAGGATAGGATTCGTGACTCAGGATGATGTTCTATTTCCTCACCTGACAGTGAAAGAAACATTAACATATGCAGCCCTCCTACAGCTGCCAAAGACATTGACAAAAGAGCAGAAAAAAAAACGAGCAGTCGATGTCATCTATGAGCTAGGCTTAGAGAGGTGCCAAGACACTATGATTGGTGGCTCGTTTGTCCGCGGGGTTTCAGGTGGAGAGAGGAAGAGAGTTTGCATTGGCAATGAGATCATAATCAACCCTTCCCTTCTGTTTCTTGATGAACCAACCTCCGGCTTGGATTCAACAACTGCACTTAGAATTGTTCAGATGTTACAAGACATGGCAGAGGCTGGAAAAACAGTGGTGACAACAATCCACCAACCATCCAGTAGACTCTTCCACAAATTTGACAAGTTGATTCTTCTTGGGAAAGGAAGCTTGCTCTACTTTGGAAAAGCATCAGAAGCAATGGTTTATTTCTCATCCATAGGATGTTCTCCACTTATTGCCATGAACCCAGCAGAGTTCTTGCTAGACCTTGCAAACGGAAACATTAACGATGTTTCTGTACCATCAGAGTTGGAGGACAAAGTTCAAATGGAAAACTCAGAAGCTGATACAAGAAATGGAAAGCCATCTCCAGCAGTTGTGCATGAGTATCTTGTGGAAGCCTATGAGACACGTGTGGCTGACGAGGAGAAGAAGAAGCTTATGGTTCCTCTTCCCCTTGATGAAGAACTGAAGTTGAAGATCTCTTTTGCGAAACGAGAATGGGGAGCAAGCTGGTGGGAACAATTTTCTATCTTATTCTGCAGAGGAATTAAAGAACGGAAGCATGACTATTTCAGCTGGTTGAGAATCACCCAAGTTCTTTCCACTGCAGTTATTTTGGGTTTACTATGGTGGCAGTCAGATAGCCACACTGCCAAAGGACTGGAAGATCAGGCAGGGCTACTTTTCTTCATTGCTGTCTTCTGGGGATTTTTCCCTGTCTTCACAGCAATATTCACATTTCCCCAAGAAAGAGCTATGCTGACCAAGGAACGAGCAGCTGACATGTACAGATTAAGTGCATATTTTGTGGCTAGGACTACAAGCGACCTCCCACTTGACCTATTGCTTCCTGTACTCTTCCTTGCAATCGTATATTTCATGGCAGGCTTAAGGCTCAGTACTGAAATCTTTTTCCTAAGCATGCTTATAGTTTTCCTATGCATTGTGGCAGCTCAGGGACTTGGATTAGCTATTGGAGCTACATTGATGGACTTAAAGAAGGCAACAACTCTGGCTTCAGTAACTGTGATGACATTCATGCTGGCTGGGGGGTTCTTCGTGAAAAAAGTTCCGGTGTTCATATCTTGGATCCGCTATATGTCTTTCAACTACCACACATACAAGCTTCTTCTGAAGGTGCAGTTTGAAGACATAATACCCACCATTAATGGGTCCAGCACTGATTGTAGTTTAACAGGAGTTGGTGCTCTTGTAGCCATGGTTTTCGGATACCGATTATTGGCATACCTTTCTTTGAGGAGAATGAAGCTTCACGCTGGAGCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004675 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006979 GO:0007154 GO:0007165 GO:0007166 GO:0007167 GO:0007178 GO:0008150 GO:0008152 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019199 GO:0019538 GO:0023052 GO:0036211 GO:0038023 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060089 GO:0065007 GO:0071704 GO:0071944 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04626 map04626

Pfam Domains

Protein Families

Pkinase_Tyr

Protein Analysis

749

Amino Acids

82.42

Weight (kDa)

8.77

Isoelectric Point (pI)

32.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_tran	PF00005	176 - 327	1.6e-29	ABC transporter
ABC2_membrane_7	PF19055	356 - 655	6e-12	ABC-2 type transporter
ABC2_membrane	PF01061	494 - 703	1.9e-46	ABC-2 type transporter
ABC2_membrane_3	PF12698	548 - 738	4.2e-06	ABC-2 family transporter protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002056)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G47060 AT2G47060 AT2G47060 AT2G47060 AT3G62220 AT3G62220
fragaria_vesca	FvH4_1g26420 FvH4_1g26420
malus_domestica	MD09G1292500.v1.1 MD17G1283600.v1.1
prunus_persica	Prupe.3G003900_v2.0.a1 Prupe.3G003900_v2.0.a1 Prupe.3G003900_v2.0.a1
pyrus_communis	pycom09g19700
rosa_chinensis	RchiOBHm_Chr3g0486191 RchiOBHm_Chr5g0052601
rosa_laevigata	RLG00000023094 RLG00000034754
rosa_multiflora	Rmu_co8331037.1_g000001 Rmu_sc0001209.1_g000013 Rmu_sc0001851.1_g000047 Rmu_sc0003459.1_g000004 Rmu_sc0017021.1_g000001
rosa_roxburghii	Rroxscaffold_1G00008910 Rroxscaffold_6G00394750 Rroxscaffold_6G00396000
rosa_rugosa	Rorug02G0403900 Rorug02G0403900 Rorug02G0403900 Rorug03G0223900 Rorug03G0223900 Rorug03G0224000 Rorug06G0040100
rosa_samantha	Rh1AG084600 Rh1CG082400 Rh1DG088900 Rh3AG273900 Rh3AG282400 Rh3BG309200 Rh3DG303800 Rh3DG314200 Rh5BG354300 Rh5DG369900
rosa_wichuraiana	Rw3G024270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	89
AccB1I	GGYRCC	2 cut(s)	272, 855
AccB7I	CCANNNNNTGG	1 cut(s)	179
AccI	GTMKAC	1 cut(s)	1081
AccII	CGCG	1 cut(s)	891
AclWI	GGATC	3 cut(s)	542, 2047, 2060
AcsI	RAATTY	3 cut(s)	13, 387, 1094
AcuI	CTGAAG	3 cut(s)	1451, 1965, 2117
AcvI	CACGTG	1 cut(s)	1373
AcyI	GRCGYC	2 cut(s)	86, 273
AfaI	GTAC	5 cut(s)	686, 1260, 1751, 1818, 1864
AfeI	AGCGCT	1 cut(s)	298
AfiI	CCNNNNNNNGG	5 cut(s)	138, 179, 980, 2133, 2203
AflII	CTTAAG	1 cut(s)	1852
AflIII	ACRYGT	3 cut(s)	1370, 1372, 1746
AgsI	TTSAA	9 cut(s)	76, 404, 529, 654, 993, 1286, 1438, 2071, 2111
AjnI	CCWGG	1 cut(s)	172
AleI	CACNNNNGTG	1 cut(s)	470
AloI	GAACNNNNNNTCC	2 cut(s)	526, 558
Alw21I	GWGCWC	2 cut(s)	238, 2173
Alw26I	GTCTC	1 cut(s)	1361
AlwI	GGATC	3 cut(s)	542, 2047, 2060
AlwNI	CAGNNNCTG	3 cut(s)	1040, 1304, 1988
Ama87I	CYCGRG	1 cut(s)	292
Aor51HI	AGCGCT	1 cut(s)	298
ApeKI	GCWGC	9 cut(s)	68, 101, 120, 123, 267, 767, 781, 1739, 1913
ApoI	RAATTY	3 cut(s)	13, 387, 1094
AseI	ATTAAT	1 cut(s)	2130
AspLEI	GCGC	4 cut(s)	156, 212, 275, 299
AspS9I	GGNCC	2 cut(s)	578, 2136
AsuC2I	CCSGG	1 cut(s)	555
AsuHPI	GGTGA	5 cut(s)	72, 316, 728, 1066, 1543
AsuNHI	GCTAGC	1 cut(s)	299
AvaI	CYCGRG	1 cut(s)	292
AvaII	GGWCC	2 cut(s)	578, 2136
BaeGI	GKGCMC	1 cut(s)	342
BamHI	GGATCC	1 cut(s)	2052
BanI	GGYRCC	2 cut(s)	272, 855
BarI	GAAGNNNNNNTAC	2 cut(s)	2103, 2135
BbrPI	CACGTG	1 cut(s)	1373
BbsI	GAAGAC	4 cut(s)	230, 1654, 1675, 2118
Bbv12I	GWGCWC	2 cut(s)	238, 2173
BbvI	GCAGC	9 cut(s)	55, 88, 132, 135, 279, 768, 779, 1751, 1925
BccI	CCATC	6 cut(s)	568, 589, 1081, 1270, 1333, 1945
BcgI	CGANNNNNNTGC	2 cut(s)	548, 582
BciT130I	CCWGG	1 cut(s)	174
BciVI	GTATCC	1 cut(s)	2186
BcnI	CCSGG	1 cut(s)	555
BcoDI	GTCTC	1 cut(s)	1361
BfaI	CTAG	5 cut(s)	228, 300, 842, 1223, 1776
BfmI	CTRYAG	3 cut(s)	776, 1501, 1569
BfoI	RGCGCY	2 cut(s)	276, 300
BfrI	CTTAAG	1 cut(s)	1852
BfuI	GTATCC	1 cut(s)	2186
BglII	AGATCT	2 cut(s)	397, 1440
BmcAI	AGTACT	1 cut(s)	1864
Bme1390I	CCNGG	2 cut(s)	174, 555
Bme18I	GGWCC	2 cut(s)	578, 2136
BmeT110I	CYCGRG	1 cut(s)	292
BmgT120I	GGNCC	2 cut(s)	578, 2136
BmiI	GGNNCC	7 cut(s)	130, 274, 579, 857, 1407, 2054, 2137
BmrFI	CCNGG	2 cut(s)	174, 555
BmsI	GCATC	1 cut(s)	1157
BmtI	GCTAGC	1 cut(s)	303
BpiI	GAAGAC	4 cut(s)	230, 1654, 1675, 2118
BpmI	CTGGAG	1 cut(s)	1314
Bpu10I	CCTNAGC	2 cut(s)	1880, 1917
BpuEI	CTTGAG	2 cut(s)	121, 443
BpuMI	CCSGG	1 cut(s)	555
BsaAI	YACGTR	1 cut(s)	1373
BsaBI	GATNNNNATC	1 cut(s)	941
BsaHI	GRCGYC	2 cut(s)	86, 273
BsaJI	CCNNGG	5 cut(s)	173, 553, 889, 1728, 2181
BsaWI	WCCGGW	1 cut(s)	2035
Bsc4I	CCNNNNNNNGG	5 cut(s)	138, 179, 980, 2133, 2203
Bse118I	RCCGGY	2 cut(s)	326, 407
Bse1I	ACTGG	4 cut(s)	54, 544, 1077, 1629
Bse3DI	GCAATG	4 cut(s)	646, 937, 1164, 1653
Bse8I	GATNNNNATC	1 cut(s)	941
BseBI	CCWGG	1 cut(s)	174
BseDI	CCNNGG	5 cut(s)	173, 553, 889, 1728, 2181
BseGI	GGATG	5 cut(s)	262, 724, 1073, 1172, 1187
BseJI	GATNNNNATC	1 cut(s)	941
BseLI	CCNNNNNNNGG	5 cut(s)	138, 179, 980, 2133, 2203
BseMI	GCAATG	4 cut(s)	646, 937, 1164, 1653
BseMII	CTCAG	4 cut(s)	728, 1311, 1873, 1931
BseNI	ACTGG	4 cut(s)	54, 544, 1077, 1629
BseRI	GAGGAG	2 cut(s)	1400, 2236
BseSI	GKGCMC	1 cut(s)	342
BseXI	GCAGC	9 cut(s)	55, 88, 132, 135, 279, 768, 779, 1751, 1925
BseYI	CCCAGC	2 cut(s)	1207, 2009
BsgI	GTGCAG	2 cut(s)	984, 2123
Bsh1236I	CGCG	1 cut(s)	891
BshNI	GGYRCC	2 cut(s)	272, 855
BsiHKAI	GWGCWC	2 cut(s)	238, 2173
BsiHKCI	CYCGRG	1 cut(s)	292
BsiSI	CCGG	5 cut(s)	327, 408, 555, 981, 2036
BslFI	GGGAC	2 cut(s)	591, 1935
BslI	CCNNNNNNNGG	5 cut(s)	138, 179, 980, 2133, 2203
BsmAI	GTCTC	1 cut(s)	1361
BsmFI	GGGAC	2 cut(s)	591, 1935
BsoBI	CYCGRG	1 cut(s)	292
Bsp1286I	GDGCHC	3 cut(s)	238, 342, 2173
Bsp1407I	TGTACA	1 cut(s)	1749
Bsp143I	GATC	7 cut(s)	43, 397, 534, 936, 1440, 1630, 2052
Bsp19I	CCATGG	1 cut(s)	2181
BspCNI	CTCAG	4 cut(s)	727, 1310, 1872, 1930
BspFNI	CGCG	1 cut(s)	891
BspLI	GGNNCC	7 cut(s)	130, 274, 579, 857, 1407, 2054, 2137
BspMAI	CTGCAG	2 cut(s)	1505, 1573
BspOI	GCTAGC	1 cut(s)	303
BspPI	GGATC	3 cut(s)	542, 2047, 2060
BspT107I	GGYRCC	2 cut(s)	272, 855
BspTI	CTTAAG	1 cut(s)	1852
BsrDI	GCAATG	4 cut(s)	646, 937, 1164, 1653
BsrFI	RCCGGY	2 cut(s)	326, 407
BsrGI	TGTACA	1 cut(s)	1749
BsrI	ACTGG	4 cut(s)	54, 544, 1077, 1629
BssAI	RCCGGY	2 cut(s)	326, 407
BssECI	CCNNGG	5 cut(s)	173, 553, 889, 1728, 2181
BssMI	GATC	7 cut(s)	43, 397, 534, 936, 1440, 1630, 2052
BssNI	GRCGYC	2 cut(s)	86, 273
BssT1I	CCWWGG	2 cut(s)	1728, 2181
Bst2UI	CCWGG	1 cut(s)	174
Bst4CI	ACNGT	4 cut(s)	337, 745, 1051, 1990
Bst6I	CTCTTC	5 cut(s)	507, 908, 1091, 1416, 1826
BstACI	GRCGYC	2 cut(s)	86, 273
BstAFI	CTTAAG	1 cut(s)	1852
BstAUI	TGTACA	1 cut(s)	1749
BstBAI	YACGTR	1 cut(s)	1373
BstC8I	GCNNGC	9 cut(s)	152, 301, 342, 409, 1130, 1471, 1849, 1886, 2007
BstDEI	CTNAG	7 cut(s)	714, 847, 1004, 1297, 1859, 1880, 1917
BstDSI	CCRYGG	2 cut(s)	889, 2181
BstF5I	GGATG	5 cut(s)	262, 724, 1073, 1172, 1187
BstFNI	CGCG	1 cut(s)	891
BstH2I	RGCGCY	2 cut(s)	276, 300
BstHHI	GCGC	4 cut(s)	156, 212, 275, 299
BstKTI	GATC	7 cut(s)	46, 400, 537, 939, 1443, 1633, 2055
BstMAI	GTCTC	1 cut(s)	1361
BstMBI	GATC	7 cut(s)	43, 397, 534, 936, 1440, 1630, 2052
BstMWI	GCNNNNNNNGC	6 cut(s)	107, 110, 296, 1154, 1940, 2177
BstNI	CCWGG	1 cut(s)	174
BstNSI	RCATGY	2 cut(s)	1750, 1888
BstSCI	CCNGG	2 cut(s)	172, 553
BstSFI	CTRYAG	3 cut(s)	776, 1501, 1569
BstSLI	GKGCMC	1 cut(s)	342
BstUI	CGCG	1 cut(s)	891
BstV1I	GCAGC	9 cut(s)	55, 88, 132, 135, 279, 768, 779, 1751, 1925
BstV2I	GAAGAC	4 cut(s)	230, 1654, 1675, 2118
BstX2I	RGATCY	3 cut(s)	397, 1440, 2052
BstXI	CCANNNNNNTGG	1 cut(s)	1624
BstYI	RGATCY	3 cut(s)	397, 1440, 2052
BsuI	GTATCC	1 cut(s)	2186
BtgI	CCRYGG	2 cut(s)	889, 2181
BtsCI	GGATG	5 cut(s)	262, 724, 1073, 1172, 1187
BtsI	GCAGTG	5 cut(s)	190, 196, 202, 1566, 1611
Cac8I	GCNNGC	9 cut(s)	152, 301, 342, 409, 1130, 1471, 1849, 1886, 2007
CaiI	CAGNNNCTG	3 cut(s)	1040, 1304, 1988
CfoI	GCGC	4 cut(s)	156, 212, 275, 299
Cfr10I	RCCGGY	2 cut(s)	326, 407
Cfr13I	GGNCC	2 cut(s)	578, 2136
Cfr42I	CCGCGG	1 cut(s)	892
Csp6I	GTAC	5 cut(s)	685, 1259, 1750, 1817, 1863
CspCI	CAANNNNNGTGG	2 cut(s)	628, 663
CviQI	GTAC	5 cut(s)	685, 1259, 1750, 1817, 1863
DdeI	CTNAG	7 cut(s)	714, 847, 1004, 1297, 1859, 1880, 1917
DinI	GGCGCC	1 cut(s)	274
DpnI	GATC	7 cut(s)	45, 399, 536, 938, 1442, 1632, 2054
DpnII	GATC	7 cut(s)	43, 397, 534, 936, 1440, 1630, 2052
Eam1104I	CTCTTC	5 cut(s)	507, 908, 1091, 1416, 1826
EarI	CTCTTC	5 cut(s)	507, 908, 1091, 1416, 1826
Eco130I	CCWWGG	2 cut(s)	1728, 2181
Eco47I	GGWCC	2 cut(s)	578, 2136
Eco47III	AGCGCT	1 cut(s)	298
Eco57I	CTGAAG	3 cut(s)	1451, 1965, 2117
Eco72I	CACGTG	1 cut(s)	1373
Eco88I	CYCGRG	1 cut(s)	292
EcoRII	CCWGG	1 cut(s)	172
EcoT14I	CCWWGG	2 cut(s)	1728, 2181
EcoT22I	ATGCAT	1 cut(s)	1907
EgeI	GGCGCC	1 cut(s)	274
EheI	GGCGCC	1 cut(s)	274
ErhI	CCWWGG	2 cut(s)	1728, 2181
FalI	AAGNNNNNCTT	2 cut(s)	509, 541
FaqI	GGGAC	2 cut(s)	591, 1935
FauI	CCCGC	2 cut(s)	349, 884
FauNDI	CATATG	1 cut(s)	763
FblI	GTMKAC	1 cut(s)	1081
FokI	GGATG	5 cut(s)	269, 731, 1060, 1159, 1194
FspBI	CTAG	5 cut(s)	228, 300, 842, 1223, 1776
GlaI	GCGC	4 cut(s)	155, 211, 274, 298
GsaI	CCCAGC	2 cut(s)	1211, 2013
GsuI	CTGGAG	1 cut(s)	1314
HaeII	RGCGCY	2 cut(s)	276, 300
HapII	CCGG	5 cut(s)	327, 408, 555, 981, 2036
HhaI	GCGC	4 cut(s)	156, 212, 275, 299
Hin1I	GRCGYC	2 cut(s)	86, 273
Hin6I	GCGC	4 cut(s)	154, 210, 273, 297
HinP1I	GCGC	4 cut(s)	154, 210, 273, 297
HindIII	AAGCTT	4 cut(s)	1126, 1397, 2087, 2231
HinfI	GANTC	8 cut(s)	56, 359, 705, 712, 989, 1083, 1108, 1548
HpaII	CCGG	5 cut(s)	327, 408, 555, 981, 2036
HphI	GGTGA	5 cut(s)	72, 316, 728, 1066, 1543
Hpy166II	GTNNAC	4 cut(s)	465, 550, 1082, 1586
Hpy188I	TCNGA	9 cut(s)	43, 432, 1017, 1153, 1267, 1300, 1603, 2097, 2192
Hpy188III	TCNNGA	8 cut(s)	392, 401, 526, 585, 709, 716, 965, 2023
Hpy8I	GTNNAC	4 cut(s)	465, 550, 1082, 1586
Hpy99I	CGWCG	2 cut(s)	88, 380
HpyAV	CCTTC	8 cut(s)	82, 331, 511, 690, 960, 965, 1957, 2092
HpyCH4III	ACNGT	4 cut(s)	337, 745, 1051, 1990
HpyCH4IV	ACGT	2 cut(s)	86, 1372
HpyF10VI	GCNNNNNNNGC	6 cut(s)	107, 110, 296, 1154, 1940, 2177
HpyF3I	CTNAG	7 cut(s)	714, 847, 1004, 1297, 1859, 1880, 1917
HpySE526I	ACGT	2 cut(s)	86, 1372
Hsp92I	GRCGYC	2 cut(s)	86, 273
HspAI	GCGC	4 cut(s)	154, 210, 273, 297
KasI	GGCGCC	1 cut(s)	272
KroI	GCCGGC	1 cut(s)	407
KroNI	GCCGGC	1 cut(s)	409
KspI	CCGCGG	1 cut(s)	892
Kzo9I	GATC	7 cut(s)	43, 397, 534, 936, 1440, 1630, 2052
LmnI	GCTCC	4 cut(s)	164, 1466, 1940, 2243
Lsp1109I	GCAGC	9 cut(s)	55, 88, 132, 135, 279, 768, 779, 1751, 1925
LweI	GCATC	1 cut(s)	1157
MaeI	CTAG	5 cut(s)	228, 300, 842, 1223, 1776
MaeII	ACGT	2 cut(s)	86, 1372
MaeIII	GTNAC	6 cut(s)	78, 472, 709, 1020, 1054, 1984
MalI	GATC	7 cut(s)	45, 399, 536, 938, 1442, 1632, 2054
MboI	GATC	7 cut(s)	43, 397, 534, 936, 1440, 1630, 2052
MflI	RGATCY	3 cut(s)	397, 1440, 2052
MhlI	GDGCHC	3 cut(s)	238, 342, 2173
MluCI	AATT	9 cut(s)	13, 260, 351, 387, 654, 1008, 1094, 1484, 1509
Mly113I	GGCGCC	1 cut(s)	273
MlyI	GAGTC	4 cut(s)	65, 353, 706, 1077
MmeI	TCCRAC	1 cut(s)	1251
Mph1103I	ATGCAT	1 cut(s)	1907
MroNI	GCCGGC	1 cut(s)	407
MslI	CAYNNNNRTG	1 cut(s)	470
MspA1I	CMGCKG	8 cut(s)	101, 126, 270, 344, 781, 891, 1539, 1742
MspCI	CTTAAG	1 cut(s)	1852
MspI	CCGG	5 cut(s)	327, 408, 555, 981, 2036
MspR9I	CCNGG	2 cut(s)	174, 555
MvaI	CCWGG	1 cut(s)	174
MvnI	CGCG	1 cut(s)	891
MwoI	GCNNNNNNNGC	6 cut(s)	107, 110, 296, 1154, 1940, 2177
NaeI	GCCGGC	1 cut(s)	409
NarI	GGCGCC	1 cut(s)	273
NciI	CCSGG	1 cut(s)	555
NcoI	CCATGG	1 cut(s)	2181
NdeI	CATATG	1 cut(s)	763
NdeII	GATC	7 cut(s)	43, 397, 534, 936, 1440, 1630, 2052
NgoMIV	GCCGGC	1 cut(s)	407
NheI	GCTAGC	1 cut(s)	299
NlaIV	GGNNCC	7 cut(s)	130, 274, 579, 857, 1407, 2054, 2137
NmuCI	GTSAC	4 cut(s)	78, 472, 709, 1054
NsiI	ATGCAT	1 cut(s)	1907
NspI	RCATGY	2 cut(s)	1750, 1888
OliI	CACNNNNGTG	1 cut(s)	470
PaeI	GCATGC	1 cut(s)	1888
PaeR7I	CTCGAG	1 cut(s)	292
PciI	ACATGT	1 cut(s)	1746
PdiI	GCCGGC	1 cut(s)	409
PfeI	GAWTC	4 cut(s)	705, 989, 1108, 1548
PflMI	CCANNNNNTGG	1 cut(s)	179
PleI	GAGTC	4 cut(s)	64, 353, 706, 1077
PluTI	GGCGCC	1 cut(s)	276
PmaCI	CACGTG	1 cut(s)	1373
PmlI	CACGTG	1 cut(s)	1373
PpsI	GAGTC	4 cut(s)	64, 353, 706, 1077
Ppu21I	YACGTR	1 cut(s)	1373
PscI	ACATGT	1 cut(s)	1746
PshBI	ATTAAT	1 cut(s)	2130
Psp6I	CCWGG	1 cut(s)	172
PspCI	CACGTG	1 cut(s)	1373
PspFI	CCCAGC	2 cut(s)	1207, 2009
PspGI	CCWGG	1 cut(s)	172
PspN4I	GGNNCC	7 cut(s)	130, 274, 579, 857, 1407, 2054, 2137
PspPI	GGNCC	2 cut(s)	578, 2136
PspXI	VCTCGAGB	1 cut(s)	292
PstI	CTGCAG	2 cut(s)	1505, 1573
PstNI	CAGNNNCTG	3 cut(s)	1040, 1304, 1988
PsuI	RGATCY	3 cut(s)	397, 1440, 2052
PvuII	CAGCTG	3 cut(s)	781, 1539, 1742
RsaI	GTAC	5 cut(s)	686, 1260, 1751, 1818, 1864
RsaNI	GTAC	5 cut(s)	685, 1259, 1750, 1817, 1863
RseI	CAYNNNNRTG	1 cut(s)	470
SacII	CCGCGG	1 cut(s)	892
Sau3AI	GATC	7 cut(s)	43, 397, 534, 936, 1440, 1630, 2052
Sau96I	GGNCC	2 cut(s)	578, 2136
ScaI	AGTACT	1 cut(s)	1864
SchI	GAGTC	4 cut(s)	65, 353, 706, 1077
ScrFI	CCNGG	2 cut(s)	174, 555
SduI	GDGCHC	3 cut(s)	238, 342, 2173
SfaNI	GCATC	1 cut(s)	1157
SfcI	CTRYAG	3 cut(s)	776, 1501, 1569
SfoI	GGCGCC	1 cut(s)	274
Sfr274I	CTCGAG	1 cut(s)	292
Sfr303I	CCGCGG	1 cut(s)	892
SgrBI	CCGCGG	1 cut(s)	892
SinI	GGWCC	2 cut(s)	578, 2136
SlaI	CTCGAG	1 cut(s)	292
SmiMI	CAYNNNNRTG	1 cut(s)	470
SmlI	CTYRAG	4 cut(s)	136, 292, 458, 1852
SmoI	CTYRAG	4 cut(s)	136, 292, 458, 1852
SphI	GCATGC	1 cut(s)	1888
Sse9I	AATT	9 cut(s)	13, 260, 351, 387, 654, 1008, 1094, 1484, 1509
SspDI	GGCGCC	1 cut(s)	272
SspI	AATATT	1 cut(s)	1695
SspMI	CTAG	5 cut(s)	228, 300, 842, 1223, 1776
StyD4I	CCNGG	2 cut(s)	172, 553
StyI	CCWWGG	2 cut(s)	1728, 2181
TaaI	ACNGT	4 cut(s)	337, 745, 1051, 1990
TaiI	ACGT	2 cut(s)	89, 1375
TaqI	TCGA	2 cut(s)	293, 825
TaqII	GACCGA	1 cut(s)	449
TasI	AATT	9 cut(s)	13, 260, 351, 387, 654, 1008, 1094, 1484, 1509
TatI	WGTACW	3 cut(s)	1749, 1816, 1862
TauI	GCSGC	4 cut(s)	101, 113, 273, 278
TfiI	GAWTC	4 cut(s)	705, 989, 1108, 1548
TseFI	GTSAC	4 cut(s)	78, 472, 709, 1054
TseI	GCWGC	9 cut(s)	68, 101, 120, 123, 267, 767, 781, 1739, 1913
Tsp45I	GTSAC	4 cut(s)	78, 472, 709, 1054
TspGWI	ACGGA	2 cut(s)	1251, 1534
Van91I	CCANNNNNTGG	1 cut(s)	179
Vha464I	CTTAAG	1 cut(s)	1852
VpaK11BI	GGWCC	2 cut(s)	578, 2136
VspI	ATTAAT	1 cut(s)	2130
XapI	RAATTY	3 cut(s)	13, 387, 1094
XceI	RCATGY	2 cut(s)	1750, 1888
XhoI	CTCGAG	1 cut(s)	292
XmiI	GTMKAC	1 cut(s)	1081
XspI	CTAG	5 cut(s)	228, 300, 842, 1223, 1776
ZraI	GACGTC	1 cut(s)	87
ZrmI	AGTACT	1 cut(s)	1864
Zsp2I	ATGCAT	1 cut(s)	1907

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.