Rh3DG314200
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
Physical Location & Seq
Reverse (-)
33803244 .. 33804602
1359 bp
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UTR
Exon/CDS
Intron
Rh3DG314200.1

Sequence Viewer

Length: 234 bp
ATGGACAATCTTATGGCAGGGGAAGTGAGCTGCTTCAGCTATTGTGATGAAGATGATATGCATAATGCAACTGGCAATGGAGGTGCTTACATGATGAAAAATCCTGCAAGTTCGTATGGAACAGTATATTATGGGGTACTTAAAAGCAGGGAGCATACAGCAATCAAGAAGCTAGATGCCAGCAAACAACCTGATGAGTTCGACTATGCTTTGGGTTTGAAAAAGATGCAATAG

Protein Analysis

77

Amino Acids

8.54

Weight (kDa)

5.13

Isoelectric Point (pI)

42.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcuI CTGAAG 1 cut(s) 19
AfaI GTAC 1 cut(s) 138
AgsI TTSAA 1 cut(s) 220
AluBI AGCT 3 cut(s) 30, 39, 172
AluI AGCT 3 cut(s) 30, 39, 172
ApeKI GCWGC 1 cut(s) 30
BbvI GCAGC 1 cut(s) 17
BfaI CTAG 1 cut(s) 173
BisI GCNGC 1 cut(s) 31
BlsI GCNGC 1 cut(s) 32
BmsI GCATC 2 cut(s) 166, 216
Bse1I ACTGG 1 cut(s) 76
Bse3DI GCAATG 1 cut(s) 82
BseMI GCAATG 1 cut(s) 82
BseNI ACTGG 1 cut(s) 76
BseXI GCAGC 1 cut(s) 17
BsrDI GCAATG 1 cut(s) 82
BsrI ACTGG 1 cut(s) 76
Bst4CI ACNGT 1 cut(s) 124
BstC8I GCNNGC 1 cut(s) 181
BstMWI GCNNNNNNNGC 1 cut(s) 36
BstV1I GCAGC 1 cut(s) 17
Cac8I GCNNGC 1 cut(s) 181
Csp6I GTAC 1 cut(s) 137
CviAII CATG 1 cut(s) 91
CviJI RGCY 3 cut(s) 30, 39, 172
CviKI_1 RGCY 3 cut(s) 30, 39, 172
CviQI GTAC 1 cut(s) 137
Eco57I CTGAAG 1 cut(s) 19
EcoT22I ATGCAT 1 cut(s) 63
FaeI CATG 1 cut(s) 94
FaiI YATR 9 cut(s) 14, 59, 63, 92, 117, 127, 132, 156, 207
FatI CATG 1 cut(s) 90
Fnu4HI GCNGC 1 cut(s) 31
Fsp4HI GCNGC 1 cut(s) 31
FspBI CTAG 1 cut(s) 173
GluI GCNGC 1 cut(s) 31
Hin1II CATG 1 cut(s) 94
Hpy188III TCNNGA 1 cut(s) 166
HpyCH4III ACNGT 1 cut(s) 124
HpyCH4V TGCA 4 cut(s) 61, 68, 107, 229
HpyF10VI GCNNNNNNNGC 1 cut(s) 36
Hsp92II CATG 1 cut(s) 94
LmnI GCTCC 1 cut(s) 151
LpnPI CCDG 6 cut(s) 3, 57, 117, 133, 193, 204
Lsp1109I GCAGC 1 cut(s) 17
LweI GCATC 2 cut(s) 166, 216
MaeI CTAG 1 cut(s) 173
MboII GAAGA 1 cut(s) 62
MnlI CCTC 1 cut(s) 74
Mph1103I ATGCAT 1 cut(s) 63
MseI TTAA 1 cut(s) 141
MwoI GCNNNNNNNGC 1 cut(s) 36
NlaIII CATG 1 cut(s) 94
NsiI ATGCAT 1 cut(s) 63
PkrI GCNGC 1 cut(s) 32
RsaI GTAC 1 cut(s) 138
RsaNI GTAC 1 cut(s) 137
SaqAI TTAA 1 cut(s) 141
SatI GCNGC 1 cut(s) 31
SetI ASST 5 cut(s) 32, 41, 85, 174, 193
SfaNI GCATC 2 cut(s) 166, 216
SspMI CTAG 1 cut(s) 173
TaaI ACNGT 1 cut(s) 124
TaqI TCGA 1 cut(s) 201
Tru1I TTAA 1 cut(s) 141
Tru9I TTAA 1 cut(s) 141
TseI GCWGC 1 cut(s) 30
TspDTI ATGAA 2 cut(s) 63, 110
XspI CTAG 1 cut(s) 173
Zsp2I ATGCAT 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.