Rh1AG084600
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
Physical Location & Seq
Forward (+)
14466843 .. 14468057
1215 bp
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UTR
Exon/CDS
Intron
Rh1AG084600.1

Sequence Viewer

Length: 315 bp
ATGGACAATCTTATGGCAGGGGAAGTGAGCTGCTTCAGCTGTTGTGATGAAGATGATATGCATAAAGCAACTGACAATGGAGGTGCTTACATGATGAAAAATCCTGCAAGAAATGAGGGAAGTCATCATGCCTCCAGTTGGTATGGAAGAGCATATTATGGGGTACTTAAAAGCAGGGAGCATGCAGCAATCAAGAAGCTAGATGCCAGCAAACAACCTGATGAGGTATCTTGCACAGATGGGACCTATCTTGCAAAAAACTGTAAATTCATTACACCTTCTCCCTCCCACAGAAAAATATGTTCCTCCATTTAA

Protein Analysis

104

Amino Acids

11.47

Weight (kDa)

6.94

Isoelectric Point (pI)

51.38

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 266
AcuI CTGAAG 1 cut(s) 19
AfaI GTAC 1 cut(s) 165
AfiI CCNNNNNNNGG 1 cut(s) 138
AluBI AGCT 3 cut(s) 30, 39, 199
AluI AGCT 3 cut(s) 30, 39, 199
ApeKI GCWGC 2 cut(s) 30, 185
ApoI RAATTY 1 cut(s) 266
AspS9I GGNCC 1 cut(s) 243
AvaII GGWCC 1 cut(s) 243
BbvI GCAGC 2 cut(s) 17, 197
BccI CCATC 1 cut(s) 233
BfaI CTAG 1 cut(s) 200
BisI GCNGC 2 cut(s) 31, 186
BlsI GCNGC 2 cut(s) 32, 187
Bme18I GGWCC 1 cut(s) 243
BmgT120I GGNCC 1 cut(s) 243
BmiI GGNNCC 1 cut(s) 244
BmsI GCATC 1 cut(s) 193
BpmI CTGGAG 1 cut(s) 118
BsaXI ACNNNNNCTCC 2 cut(s) 265, 295
Bsc4I CCNNNNNNNGG 1 cut(s) 138
Bse1I ACTGG 1 cut(s) 135
BseLI CCNNNNNNNGG 1 cut(s) 138
BseNI ACTGG 1 cut(s) 135
BseXI GCAGC 2 cut(s) 17, 197
BslFI GGGAC 1 cut(s) 256
BslI CCNNNNNNNGG 1 cut(s) 138
BsmFI GGGAC 1 cut(s) 256
BspLI GGNNCC 1 cut(s) 244
BspQI GCTCTTC 1 cut(s) 142
BsrI ACTGG 1 cut(s) 135
Bst4CI ACNGT 1 cut(s) 263
Bst6I CTCTTC 1 cut(s) 142
BstC8I GCNNGC 2 cut(s) 183, 208
BstMWI GCNNNNNNNGC 1 cut(s) 36
BstNSI RCATGY 1 cut(s) 185
BstV1I GCAGC 2 cut(s) 17, 197
Cac8I GCNNGC 2 cut(s) 183, 208
Cfr13I GGNCC 1 cut(s) 243
Csp6I GTAC 1 cut(s) 164
CviAII CATG 3 cut(s) 91, 128, 182
CviJI RGCY 3 cut(s) 30, 39, 199
CviKI_1 RGCY 3 cut(s) 30, 39, 199
CviQI GTAC 1 cut(s) 164
Eam1104I CTCTTC 1 cut(s) 142
EarI CTCTTC 1 cut(s) 142
Eco47I GGWCC 1 cut(s) 243
Eco57I CTGAAG 1 cut(s) 19
EcoO109I RGGNCCY 1 cut(s) 243
EcoT22I ATGCAT 1 cut(s) 63
FaeI CATG 3 cut(s) 94, 131, 185
FaqI GGGAC 1 cut(s) 256
FatI CATG 3 cut(s) 90, 127, 181
Fnu4HI GCNGC 2 cut(s) 31, 186
Fsp4HI GCNGC 2 cut(s) 31, 186
FspBI CTAG 1 cut(s) 200
GluI GCNGC 2 cut(s) 31, 186
GsuI CTGGAG 1 cut(s) 118
Hin1II CATG 3 cut(s) 94, 131, 185
Hpy188III TCNNGA 1 cut(s) 193
HpyAV CCTTC 1 cut(s) 288
HpyCH4III ACNGT 1 cut(s) 263
HpyCH4V TGCA 5 cut(s) 61, 107, 185, 234, 254
HpyF10VI GCNNNNNNNGC 1 cut(s) 36
Hsp92II CATG 3 cut(s) 94, 131, 185
LguI GCTCTTC 1 cut(s) 142
LmnI GCTCC 1 cut(s) 178
LpnPI CCDG 6 cut(s) 3, 117, 148, 160, 220, 231
Lsp1109I GCAGC 2 cut(s) 17, 197
LweI GCATC 1 cut(s) 193
MaeI CTAG 1 cut(s) 200
MboII GAAGA 2 cut(s) 62, 159
MluCI AATT 1 cut(s) 266
MnlI CCTC 5 cut(s) 74, 109, 142, 217, 295
Mph1103I ATGCAT 1 cut(s) 63
MseI TTAA 2 cut(s) 168, 313
MspA1I CMGCKG 1 cut(s) 39
MwoI GCNNNNNNNGC 1 cut(s) 36
NlaIII CATG 3 cut(s) 94, 131, 185
NlaIV GGNNCC 1 cut(s) 244
NsiI ATGCAT 1 cut(s) 63
NspI RCATGY 1 cut(s) 185
PaeI GCATGC 1 cut(s) 185
PciSI GCTCTTC 1 cut(s) 142
PkrI GCNGC 2 cut(s) 32, 187
PpuMI RGGWCCY 1 cut(s) 243
Psp5II RGGWCCY 1 cut(s) 243
PspN4I GGNNCC 1 cut(s) 244
PspPI GGNCC 1 cut(s) 243
PspPPI RGGWCCY 1 cut(s) 243
PvuII CAGCTG 1 cut(s) 39
RsaI GTAC 1 cut(s) 165
RsaNI GTAC 1 cut(s) 164
SapI GCTCTTC 1 cut(s) 142
SaqAI TTAA 2 cut(s) 168, 313
SatI GCNGC 2 cut(s) 31, 186
Sau96I GGNCC 1 cut(s) 243
SetI ASST 8 cut(s) 32, 41, 85, 201, 220, 228, 248, 280
SfaNI GCATC 1 cut(s) 193
SinI GGWCC 1 cut(s) 243
SphI GCATGC 1 cut(s) 185
Sse9I AATT 1 cut(s) 266
SspMI CTAG 1 cut(s) 200
TaaI ACNGT 1 cut(s) 263
TasI AATT 1 cut(s) 266
Tru1I TTAA 2 cut(s) 168, 313
Tru9I TTAA 2 cut(s) 168, 313
TseI GCWGC 2 cut(s) 30, 185
TspDTI ATGAA 3 cut(s) 63, 110, 259
VpaK11BI GGWCC 1 cut(s) 243
XapI RAATTY 1 cut(s) 266
XceI RCATGY 1 cut(s) 185
XspI CTAG 1 cut(s) 200
Zsp2I ATGCAT 1 cut(s) 63
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.