MD09G1292400.v1.1

NYN domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr09
OG0011904
Physical Location & Seq
Reverse (-)
37505355 .. 37508610
3256 bp
Loading structure...
UTR
Exon/CDS
Intron
MD09G1292400.v1.1.491

Sequence Viewer

Length: 1971 bp
ATGCGTGGGGATGTGAACGGAAGCACCACGGCGGCGGGGGCGCCCTCCATGGGTATGGCGGAGGCGCAGTACGTGAACGCCAAAACGTCGGTGTGGTGGGACATAGAGAACTGCCAGGTCCCTAAAGGCTGCGATGCCCACGCCATCGCCCAGAACATCAGTTCCGCCCTCGTGAACATGAATTATTGTGGGCCCGTCTCCATCTCCGCCTACGGCGACACCAACGGCATCCCTACTTCTGTTCAGCACTCCCTCTCCAGCACCGGCATCGGCCTTAACCACGTCCCCGCCGGTGTCAAAGATGCAAGCGATAAGAAGATTCTAGTCGATATGTTGTTCTGGGCAGTAGATAACCCTGCACCAGCAAACTACCTGCTTATTTCTGGAGACAGGGATTTCTCCAATGCTCTACACCAGTTGCGCATGAGAAGATACAACATTCTTCTGGCACAACCACAAAAAGCTTCTGCACCCCTCATCGCTGCAGCAAAGAGTGTATGGCTTTGGACAAGCCTCTCAGCTGGAGGGCCCCCACTTTCAAGCGGGGAATCATCTCAGCTTGCAAATGGTAACAATTCTTATAACCCTGAAATGTCGCAGCATTCGATGCCTGAAACATTCCATATAAATCCACCTCCAGTTTATTATGAACATCCTTTGGGAAATCAAAAGCCCTCTACCAACGGAAGGGTTGGTGATACTAAAAACAAGGGGAAATTCAATCGGAAAAACCCAAATCAACCCAACATATCAAAAGCCTCAAGTATGCCAGTTAGGAACCAAGATGACAAGAATACTGATTACTCTTACCAGTCAGAACATGCACAGGCAAAGCAGTTTAAGAAAGCTCCACACGAATTCTTTGGTTCTGGTGACACTCCAGTCTCCACTAGTAGGTCCACTCCCAATTTCTTCCATGGAAATTCTGATCCTTCAGGCAGTGATGGCAATAGTTTCCTAGGTCAACCAAACCAGTATCCTCCTCCTCCTCAGCGGCCGAACAACTTCCACATGCAACCGAATTTTGGACCAGATAGTATGCTCCCTCCTAATTCCCATAGTTATGGTTTACGACCTATTCCTCCCAGACCTGGTGGCCCTAGATTTTCTTCATCCCCACCTACAAATGTGCCTGATATGAGTAAGCTAAATATCTCTGAGTATAACAATTATGCTCAAAATCCACAAAGGTTCCCTCATCGAAATGGGGAAGAGTTTAGTAGGCCAAGGTCTAGCGATTCACTGAATTCAGCTAACTTAAATGTGCCTCATAAAGGCCATAATATGCAGAATGGCCAGGCGTTTCATCATGATTCTATGAACAACAGGTATCCTCGTGGTTCCGAGTATCGGCCTCCTCAAACCTCCCCTGCTGTTGGAAACAACATACCTAGCAATGGTACTTGGGGAGCTCAAGGCTGCACACCACCATCTGAATATGTTCAAGGCCTTATTGGTGTTATTTTACTAGCTTTGAACACCCTGAAAGTTGAAAAAATTATGCCGACTGAAGCAAACATTACCGATTGCATTCGTTATGGTGATCTGAAACACCGCAATACCGATGTAAGGAAGGCCTTGGATTACGCAATAGAGCAACATATGGTGGTCAAGCAGAGCCTGGGTGCAGTTCAGTTGTATGTTGGTAAGAAAGAGAAATTATGGAAGTGTGTGAACCCTATAGGGGGTAATCTTAATCAGTACTCTAAAGCAACATGGGAACGAATACAGAACTTTCTGAGTTCCTCAGATGGACGATCGGCAATAATGGCCTCTCAATGCAGATATGAAGCAGCTATTATTTTGAGGAAAGCATGCTCTGAAGAGCTTGCTTTGGGCAATGTACTTCAGATCTTGAATATGATAGTCAGCATGAAGAAATGGATCATTCATCATCAATCTGGATGGCAACCGATTACTTTTACCCTTGAAGAGACTAAAGCTGAAACGGCTGCTGAAATTGGTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NYN OHA

Protein Analysis

657

Amino Acids

71.91

Weight (kDa)

8.93

Isoelectric Point (pI)

44.16

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NYN PF01936 28 - 164 1.7e-29 NYN domain
DUF7625 PF24620 471 - 564 7.4e-49 Domain of unknown function (DUF7625)
OHA PF14418 592 - 649 1e-07 OST-HTH Associated domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011904)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G62200
fragaria_vesca FvH4_1g26400 FvH4_1g26400 FvH4_1g26400
malus_domestica MD09G1292400.v1.1 MD17G1283700.v1.1
prunus_persica Prupe.3G003800_v2.0.a1
pyrus_communis pycom09g19710 pycom17g27960
rosa_chinensis RchiOBHm_Chr3g0486181
rosa_laevigata RLG00000023095
rosa_multiflora Rmu_sc0000372.1_g000001
rosa_roxburghii Rroxscaffold_6G00396010
rosa_rugosa Rorug03G0223900
rosa_samantha Rh3AG273800 Rh3BG309100 Rh3CG307300 Rh3DG303700
rosa_wichuraiana Rw3G024260

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 582
AasI GACNNNNNNGTC 1 cut(s) 881
Acc16I TGCGCA 1 cut(s) 422
Acc36I ACCTGC 1 cut(s) 381
AccB1I GGYRCC 1 cut(s) 40
AciI CCGC 9 cut(s) 32, 35, 59, 165, 207, 288, 543, 994, 1555
AclWI GGATC 2 cut(s) 923, 1892
AcoI YGGCCR 2 cut(s) 995, 1294
AcsI RAATTY 5 cut(s) 716, 857, 922, 1021, 1246
AcuI CTGAAG 4 cut(s) 918, 1530, 1832, 1842
AcyI GRCGYC 1 cut(s) 41
AfaI GTAC 5 cut(s) 71, 1402, 1703, 1845, 1966
AgsI TTSAA 7 cut(s) 540, 721, 1445, 1477, 1493, 1858, 1931
AhlI ACTAGT 1 cut(s) 890
AjiI CACGTC 1 cut(s) 283
AjnI CCWGG 4 cut(s) 114, 1090, 1296, 1620
AloI GAACNNNNNNTCC 2 cut(s) 146, 178
Alw21I GWGCWC 1 cut(s) 1414
Alw26I GTCTC 4 cut(s) 202, 381, 889, 1928
AlwI GGATC 2 cut(s) 923, 1892
AlwNI CAGNNNCTG 1 cut(s) 1621
ApaI GGGCCC 2 cut(s) 195, 531
ApeKI GCWGC 7 cut(s) 129, 482, 485, 598, 1419, 1793, 1952
ApoI RAATTY 5 cut(s) 716, 857, 922, 1021, 1246
Asp700I GAANNNNTTC 2 cut(s) 1004, 1440
AspA2I CCTAGG 1 cut(s) 958
AspLEI GCGC 3 cut(s) 43, 67, 423
AspS9I GGNCC 8 cut(s) 118, 191, 192, 527, 528, 897, 1028, 1097
AsuHPI GGTGA 3 cut(s) 707, 884, 1553
AvaII GGWCC 3 cut(s) 118, 897, 1028
AvrII CCTAGG 1 cut(s) 958
BaeGI GKGCMC 2 cut(s) 195, 531
BalI TGGCCA 1 cut(s) 1296
BanI GGYRCC 1 cut(s) 40
BanII GRGCYC 3 cut(s) 195, 531, 1414
BauI CACGAG 2 cut(s) 170, 1335
Bbv12I GWGCWC 1 cut(s) 1414
BbvCI CCTCAGC 1 cut(s) 990
BbvI GCAGC 7 cut(s) 116, 469, 497, 610, 1406, 1805, 1939
BccI CCATC 6 cut(s) 152, 209, 938, 1438, 1745, 1899
BceAI ACGGC 4 cut(s) 45, 229, 241, 1965
BcgI CGANNNNNNTGC 2 cut(s) 250, 284
BciT130I CCWGG 4 cut(s) 116, 1092, 1298, 1622
BciVI GTATCC 2 cut(s) 987, 1341
BcoDI GTCTC 4 cut(s) 202, 381, 889, 1928
BcuI ACTAGT 1 cut(s) 890
BfaI CTAG 7 cut(s) 323, 891, 959, 1101, 1233, 1392, 1469
BfmI CTRYAG 2 cut(s) 483, 1680
BfoI RGCGCY 1 cut(s) 44
BfuAI ACCTGC 1 cut(s) 381
BfuI GTATCC 2 cut(s) 987, 1341
BglII AGATCT 1 cut(s) 1851
BisI GCNGC 9 cut(s) 33, 130, 483, 486, 599, 995, 1420, 1794, 1953
BlnI CCTAGG 1 cut(s) 958
BlsI GCNGC 9 cut(s) 34, 131, 484, 487, 600, 996, 1421, 1795, 1954
BmcAI AGTACT 1 cut(s) 1703
Bme1390I CCNGG 4 cut(s) 116, 1092, 1298, 1622
Bme18I GGWCC 3 cut(s) 118, 897, 1028
BmgBI CACGTC 1 cut(s) 283
BmgT120I GGNCC 8 cut(s) 118, 191, 192, 527, 528, 897, 1028, 1097
BmiI GGNNCC 8 cut(s) 42, 120, 193, 529, 530, 779, 1193, 1342
BmrFI CCNGG 4 cut(s) 116, 1092, 1298, 1622
BmsI GCATC 5 cut(s) 124, 237, 276, 292, 597
BpmI CTGGAG 5 cut(s) 241, 405, 543, 621, 864
Bpu10I CCTNAGC 1 cut(s) 990
BpuEI CTTGAG 2 cut(s) 745, 1398
BsaAI YACGTR 1 cut(s) 73
BsaHI GRCGYC 1 cut(s) 41
BsaJI CCNNGG 7 cut(s) 27, 48, 916, 958, 1226, 1578, 1621
BsaXI ACNNNNNCTCC 4 cut(s) 53, 83, 239, 269
Bse118I RCCGGY 2 cut(s) 263, 290
Bse1I ACTGG 6 cut(s) 415, 638, 770, 811, 881, 973
Bse3DI GCAATG 2 cut(s) 1402, 1846
BseBI CCWGG 4 cut(s) 116, 1092, 1298, 1622
BseDI CCNNGG 7 cut(s) 27, 48, 916, 958, 1226, 1578, 1621
BseGI GGATG 5 cut(s) 16, 228, 652, 1112, 1910
BseMI GCAATG 2 cut(s) 1402, 1846
BseMII CTCAG 6 cut(s) 531, 569, 1004, 1149, 1730, 1761
BseNI ACTGG 6 cut(s) 415, 638, 770, 811, 881, 973
BseRI GAGGAG 4 cut(s) 972, 975, 978, 1347
BseSI GKGCMC 2 cut(s) 195, 531
BseX3I CGGCCG 1 cut(s) 995
BseXI GCAGC 7 cut(s) 116, 469, 497, 610, 1406, 1805, 1939
BsgI GTGCAG 4 cut(s) 342, 453, 1405, 1647
Bsh1285I CGRYCG 2 cut(s) 998, 1760
BshNI GGYRCC 1 cut(s) 40
BsiEI CGRYCG 2 cut(s) 998, 1760
BsiHKAI GWGCWC 1 cut(s) 1414
BsiSI CCGG 2 cut(s) 264, 291
BslFI GGGAC 3 cut(s) 104, 113, 269
BsmAI GTCTC 4 cut(s) 202, 381, 889, 1928
BsmBI CGTCTC 1 cut(s) 202
BsmFI GGGAC 3 cut(s) 104, 113, 269
BsmI GAATGC 2 cut(s) 601, 1530
Bsp120I GGGCCC 2 cut(s) 191, 527
Bsp1286I GDGCHC 3 cut(s) 195, 531, 1414
Bsp143I GATC 5 cut(s) 928, 1543, 1757, 1851, 1884
Bsp19I CCATGG 2 cut(s) 48, 916
BspACI CCGC 9 cut(s) 32, 35, 59, 165, 207, 288, 543, 994, 1555
BspCNI CTCAG 6 cut(s) 530, 568, 1003, 1150, 1731, 1760
BspHI TCATGA 1 cut(s) 1309
BspLI GGNNCC 8 cut(s) 42, 120, 193, 529, 530, 779, 1193, 1342
BspMAI CTGCAG 1 cut(s) 487
BspMI ACCTGC 1 cut(s) 381
BspPI GGATC 2 cut(s) 923, 1892
BspQI GCTCTTC 1 cut(s) 1818
BspT107I GGYRCC 1 cut(s) 40
BsrDI GCAATG 2 cut(s) 1402, 1846
BsrFI RCCGGY 2 cut(s) 263, 290
BsrI ACTGG 6 cut(s) 415, 638, 770, 811, 881, 973
BssAI RCCGGY 2 cut(s) 263, 290
BssECI CCNNGG 7 cut(s) 27, 48, 916, 958, 1226, 1578, 1621
BssMI GATC 5 cut(s) 928, 1543, 1757, 1851, 1884
BssNI GRCGYC 1 cut(s) 41
BssSI CACGAG 2 cut(s) 170, 1335
BssT1I CCWWGG 5 cut(s) 48, 916, 958, 1226, 1578
Bst2BI CACGAG 2 cut(s) 170, 1335
Bst2UI CCWGG 4 cut(s) 116, 1092, 1298, 1622
Bst6I CTCTTC 3 cut(s) 1206, 1818, 1926
BstACI GRCGYC 1 cut(s) 41
BstAPI GCANNNNNTGC 1 cut(s) 607
BstBAI YACGTR 1 cut(s) 73
BstC8I GCNNGC 4 cut(s) 307, 561, 1816, 1830
BstDEI CTNAG 6 cut(s) 517, 555, 990, 1158, 1739, 1747
BstDSI CCRYGG 3 cut(s) 27, 48, 916
BstENI CCTNNNNNAGG 1 cut(s) 1272
BstF5I GGATG 5 cut(s) 16, 228, 652, 1112, 1910
BstH2I RGCGCY 1 cut(s) 44
BstHHI GCGC 3 cut(s) 43, 67, 423
BstKTI GATC 5 cut(s) 931, 1546, 1760, 1854, 1887
BstMAI GTCTC 4 cut(s) 202, 381, 889, 1928
BstMBI GATC 5 cut(s) 928, 1543, 1757, 1851, 1884
BstMCI CGRYCG 2 cut(s) 998, 1760
BstMWI GCNNNNNNNGC 5 cut(s) 38, 607, 945, 1769, 1949
BstNI CCWGG 4 cut(s) 116, 1092, 1298, 1622
BstNSI RCATGY 3 cut(s) 824, 1015, 1818
BstSCI CCNGG 4 cut(s) 114, 1090, 1296, 1620
BstSFI CTRYAG 2 cut(s) 483, 1680
BstSLI GKGCMC 2 cut(s) 195, 531
BstV1I GCAGC 7 cut(s) 116, 469, 497, 610, 1406, 1805, 1939
BstX2I RGATCY 1 cut(s) 1851
BstXI CCANNNNNNTGG 2 cut(s) 55, 1064
BstYI RGATCY 1 cut(s) 1851
BstZI CGGCCG 1 cut(s) 995
BsuI GTATCC 2 cut(s) 987, 1341
BtgI CCRYGG 3 cut(s) 27, 48, 916
BtgZI GCGATG 3 cut(s) 130, 147, 463
BtrI CACGTC 1 cut(s) 283
BtsCI GGATG 5 cut(s) 16, 228, 652, 1112, 1910
BtsI GCAGTG 1 cut(s) 946
BtsIMutI CAGTG 2 cut(s) 946, 1241
BveI ACCTGC 1 cut(s) 381
Cac8I GCNNGC 4 cut(s) 307, 561, 1816, 1830
CaiI CAGNNNCTG 1 cut(s) 1621
CciI TCATGA 1 cut(s) 1309
CfoI GCGC 3 cut(s) 43, 67, 423
Cfr10I RCCGGY 2 cut(s) 263, 290
Cfr13I GGNCC 8 cut(s) 118, 191, 192, 527, 528, 897, 1028, 1097
CsiI ACCWGGT 1 cut(s) 1090
Csp6I GTAC 5 cut(s) 70, 1401, 1702, 1844, 1965
CviQI GTAC 5 cut(s) 70, 1401, 1702, 1844, 1965
DdeI CTNAG 6 cut(s) 517, 555, 990, 1158, 1739, 1747
DinI GGCGCC 1 cut(s) 42
DpnI GATC 5 cut(s) 930, 1545, 1759, 1853, 1886
DpnII GATC 5 cut(s) 928, 1543, 1757, 1851, 1884
DrdI GACNNNNNNGTC 1 cut(s) 881
DseDI GACNNNNNNGTC 1 cut(s) 881
EaeI YGGCCR 2 cut(s) 995, 1294
EagI CGGCCG 1 cut(s) 995
Eam1104I CTCTTC 3 cut(s) 1206, 1818, 1926
EarI CTCTTC 3 cut(s) 1206, 1818, 1926
EciI GGCGGA 3 cut(s) 74, 154, 196
Ecl136II GAGCTC 1 cut(s) 1412
EclXI CGGCCG 1 cut(s) 995
Eco130I CCWWGG 5 cut(s) 48, 916, 958, 1226, 1578
Eco147I AGGCCT 2 cut(s) 1449, 1577
Eco24I GRGCYC 3 cut(s) 195, 531, 1414
Eco47I GGWCC 3 cut(s) 118, 897, 1028
Eco52I CGGCCG 1 cut(s) 995
Eco53kI GAGCTC 1 cut(s) 1412
Eco57I CTGAAG 4 cut(s) 918, 1530, 1832, 1842
EcoICRI GAGCTC 1 cut(s) 1412
EcoNI CCTNNNNNAGG 1 cut(s) 1272
EcoO109I RGGNCCY 3 cut(s) 118, 527, 528
EcoRI GAATTC 2 cut(s) 857, 1246
EcoRII CCWGG 4 cut(s) 114, 1090, 1296, 1620
EcoT14I CCWWGG 5 cut(s) 48, 916, 958, 1226, 1578
EcoT38I GRGCYC 3 cut(s) 195, 531, 1414
EgeI GGCGCC 1 cut(s) 42
EheI GGCGCC 1 cut(s) 42
ErhI CCWWGG 5 cut(s) 48, 916, 958, 1226, 1578
Esp3I CGTCTC 1 cut(s) 202
FaqI GGGAC 3 cut(s) 104, 113, 269
FauI CCCGC 3 cut(s) 28, 295, 536
FauNDI CATATG 1 cut(s) 1602
Fnu4HI GCNGC 9 cut(s) 33, 130, 483, 486, 599, 995, 1420, 1794, 1953
FokI GGATG 5 cut(s) 23, 215, 639, 1099, 1917
FriOI GRGCYC 3 cut(s) 195, 531, 1414
Fsp4HI GCNGC 9 cut(s) 33, 130, 483, 486, 599, 995, 1420, 1794, 1953
FspBI CTAG 7 cut(s) 323, 891, 959, 1101, 1233, 1392, 1469
FspI TGCGCA 1 cut(s) 422
GlaI GCGC 3 cut(s) 42, 66, 422
GluI GCNGC 9 cut(s) 33, 130, 483, 486, 599, 995, 1420, 1794, 1953
GsuI CTGGAG 5 cut(s) 241, 405, 543, 621, 864
HaeII RGCGCY 1 cut(s) 44
HapII CCGG 2 cut(s) 264, 291
HhaI GCGC 3 cut(s) 43, 67, 423
Hin1I GRCGYC 1 cut(s) 41
Hin6I GCGC 3 cut(s) 41, 65, 421
HinP1I GCGC 3 cut(s) 41, 65, 421
HincII GTYRAC 1 cut(s) 965
HindII GTYRAC 1 cut(s) 965
HindIII AAGCTT 1 cut(s) 462
HinfI GANTC 4 cut(s) 319, 548, 1238, 1313
HpaII CCGG 2 cut(s) 264, 291
HphI GGTGA 3 cut(s) 707, 884, 1553
Hpy166II GTNNAC 7 cut(s) 16, 76, 175, 900, 965, 1070, 1675
Hpy188III TCNNGA 5 cut(s) 172, 384, 1310, 1855, 1902
Hpy8I GTNNAC 7 cut(s) 16, 76, 175, 900, 965, 1070, 1675
Hpy99I CGWCG 1 cut(s) 91
HpyAV CCTTC 3 cut(s) 681, 942, 1567
HpyCH4IV ACGT 3 cut(s) 72, 86, 282
HpyF10VI GCNNNNNNNGC 5 cut(s) 38, 607, 945, 1769, 1949
HpyF3I CTNAG 6 cut(s) 517, 555, 990, 1158, 1739, 1747
HpySE526I ACGT 3 cut(s) 72, 86, 282
Hsp92I GRCGYC 1 cut(s) 41
HspAI GCGC 3 cut(s) 41, 65, 421
KasI GGCGCC 1 cut(s) 40
Kzo9I GATC 5 cut(s) 928, 1543, 1757, 1851, 1884
LguI GCTCTTC 1 cut(s) 1818
LmnI GCTCC 3 cut(s) 853, 1047, 1409
Lsp1109I GCAGC 7 cut(s) 116, 469, 497, 610, 1406, 1805, 1939
LweI GCATC 5 cut(s) 124, 237, 276, 292, 597
MabI ACCWGGT 1 cut(s) 1090
MaeI CTAG 7 cut(s) 323, 891, 959, 1101, 1233, 1392, 1469
MaeII ACGT 3 cut(s) 72, 86, 282
MaeIII GTNAC 2 cut(s) 569, 872
MalI GATC 5 cut(s) 930, 1545, 1759, 1853, 1886
MboI GATC 5 cut(s) 928, 1543, 1757, 1851, 1884
MboII GAAGA 9 cut(s) 328, 434, 441, 904, 1101, 1223, 1835, 1888, 1943
MflI RGATCY 1 cut(s) 1851
MhlI GDGCHC 3 cut(s) 195, 531, 1414
MlsI TGGCCA 1 cut(s) 1296
MluNI TGGCCA 1 cut(s) 1296
Mly113I GGCGCC 1 cut(s) 41
MmeI TCCRAC 1 cut(s) 1357
Mox20I TGGCCA 1 cut(s) 1296
MroXI GAANNNNTTC 2 cut(s) 1004, 1440
MscI TGGCCA 1 cut(s) 1296
MseI TTAA 4 cut(s) 276, 840, 1259, 1695
MslI CAYNNNNRTG 3 cut(s) 53, 1062, 1203
Msp20I TGGCCA 1 cut(s) 1296
MspA1I CMGCKG 2 cut(s) 521, 994
MspI CCGG 2 cut(s) 264, 291
MspR9I CCNGG 4 cut(s) 116, 1092, 1298, 1622
Mva1269I GAATGC 2 cut(s) 601, 1530
MvaI CCWGG 4 cut(s) 116, 1092, 1298, 1622
MwoI GCNNNNNNNGC 5 cut(s) 38, 607, 945, 1769, 1949
NarI GGCGCC 1 cut(s) 41
NcoI CCATGG 2 cut(s) 48, 916
NdeI CATATG 1 cut(s) 1602
NdeII GATC 5 cut(s) 928, 1543, 1757, 1851, 1884
NlaIV GGNNCC 8 cut(s) 42, 120, 193, 529, 530, 779, 1193, 1342
NmuCI GTSAC 1 cut(s) 872
NsbI TGCGCA 1 cut(s) 422
NspI RCATGY 3 cut(s) 824, 1015, 1818
PaeI GCATGC 1 cut(s) 1818
PagI TCATGA 1 cut(s) 1309
PceI AGGCCT 2 cut(s) 1449, 1577
PciSI GCTCTTC 1 cut(s) 1818
PcsI WCGNNNNNNNCGW 1 cut(s) 602
PctI GAATGC 2 cut(s) 601, 1530
PdmI GAANNNNTTC 2 cut(s) 1004, 1440
PfeI GAWTC 4 cut(s) 319, 548, 1238, 1313
PkrI GCNGC 9 cut(s) 34, 131, 484, 487, 600, 996, 1421, 1795, 1954
Ple19I CGATCG 1 cut(s) 1760
PluTI GGCGCC 1 cut(s) 44
Ppu21I YACGTR 1 cut(s) 73
PpuMI RGGWCCY 1 cut(s) 118
PsiI TTATAA 1 cut(s) 582
Psp124BI GAGCTC 1 cut(s) 1414
Psp5II RGGWCCY 1 cut(s) 118
Psp6I CCWGG 4 cut(s) 114, 1090, 1296, 1620
PspGI CCWGG 4 cut(s) 114, 1090, 1296, 1620
PspN4I GGNNCC 8 cut(s) 42, 120, 193, 529, 530, 779, 1193, 1342
PspOMI GGGCCC 2 cut(s) 191, 527
PspPI GGNCC 8 cut(s) 118, 191, 192, 527, 528, 897, 1028, 1097
PspPPI RGGWCCY 1 cut(s) 118
PstI CTGCAG 1 cut(s) 487
PstNI CAGNNNCTG 1 cut(s) 1621
PsuI RGATCY 1 cut(s) 1851
PvuI CGATCG 1 cut(s) 1760
PvuII CAGCTG 1 cut(s) 521
RsaI GTAC 5 cut(s) 71, 1402, 1703, 1845, 1966
RsaNI GTAC 5 cut(s) 70, 1401, 1702, 1844, 1965
RseI CAYNNNNRTG 3 cut(s) 53, 1062, 1203
SacI GAGCTC 1 cut(s) 1414
SapI GCTCTTC 1 cut(s) 1818
SaqAI TTAA 4 cut(s) 276, 840, 1259, 1695
SatI GCNGC 9 cut(s) 33, 130, 483, 486, 599, 995, 1420, 1794, 1953
Sau3AI GATC 5 cut(s) 928, 1543, 1757, 1851, 1884
Sau96I GGNCC 8 cut(s) 118, 191, 192, 527, 528, 897, 1028, 1097
ScaI AGTACT 1 cut(s) 1703
ScrFI CCNGG 4 cut(s) 116, 1092, 1298, 1622
SduI GDGCHC 3 cut(s) 195, 531, 1414
SexAI ACCWGGT 1 cut(s) 1090
SfaNI GCATC 5 cut(s) 124, 237, 276, 292, 597
SfcI CTRYAG 2 cut(s) 483, 1680
SfoI GGCGCC 1 cut(s) 42
SgrAI CRCCGGYG 1 cut(s) 290
SinI GGWCC 3 cut(s) 118, 897, 1028
SmiMI CAYNNNNRTG 3 cut(s) 53, 1062, 1203
SmlI CTYRAG 2 cut(s) 760, 1413
SmoI CTYRAG 2 cut(s) 760, 1413
SpeI ACTAGT 1 cut(s) 890
SphI GCATGC 1 cut(s) 1818
SseBI AGGCCT 2 cut(s) 1449, 1577
SsiI CCGC 9 cut(s) 32, 35, 59, 165, 207, 288, 543, 994, 1555
SspDI GGCGCC 1 cut(s) 40
SspMI CTAG 7 cut(s) 323, 891, 959, 1101, 1233, 1392, 1469
SstI GAGCTC 1 cut(s) 1414
StuI AGGCCT 2 cut(s) 1449, 1577
StyD4I CCNGG 4 cut(s) 114, 1090, 1296, 1620
StyI CCWWGG 5 cut(s) 48, 916, 958, 1226, 1578
TaiI ACGT 3 cut(s) 75, 89, 285
TaqI TCGA 3 cut(s) 327, 605, 1201
TatI WGTACW 2 cut(s) 1701, 1843
TauI GCSGC 2 cut(s) 35, 997
TfiI GAWTC 4 cut(s) 319, 548, 1238, 1313
Tru1I TTAA 4 cut(s) 276, 840, 1259, 1695
Tru9I TTAA 4 cut(s) 276, 840, 1259, 1695
TscAI CASTG 2 cut(s) 946, 1248
TseFI GTSAC 1 cut(s) 872
TseI GCWGC 7 cut(s) 129, 482, 485, 598, 1419, 1793, 1952
Tsp45I GTSAC 1 cut(s) 872
TspDTI ATGAA 8 cut(s) 194, 663, 1101, 1295, 1334, 1803, 1880, 1889
TspGWI ACGGA 2 cut(s) 33, 699
TspRI CASTG 2 cut(s) 946, 1248
VpaK11BI GGWCC 3 cut(s) 118, 897, 1028
XagI CCTNNNNNAGG 1 cut(s) 1272
XapI RAATTY 5 cut(s) 716, 857, 922, 1021, 1246
XceI RCATGY 3 cut(s) 824, 1015, 1818
XmaJI CCTAGG 1 cut(s) 958
XmnI GAANNNNTTC 2 cut(s) 1004, 1440
XspI CTAG 7 cut(s) 323, 891, 959, 1101, 1233, 1392, 1469
ZrmI AGTACT 1 cut(s) 1703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.