FvH4_1g30400

KH-domain-like of EngA bacterial GTPase enzymes, C-terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0001492
Physical Location & Seq
Forward (+)
24103125 .. 24112799
9675 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g30400.t22

Sequence Viewer

Length: 1890 bp
ATGGTTATGGCAGCTGAGCTCTTGTGTCTCTCCAAAACCCTATCTCTCGTCTCTTTCCCATTTCCCAAATCAACTCTCCCTCTTCTTCTTCGCGCCACTCCCTACTCCCTTCCCCTCCACCGCCGCCGCCGCTTCCTCTCCCGCCTCTCCGCCGCTGATCATCTCGATGTTTCCGCAACAGAGCCTGACGGAGATGAGTCCGACGTCGATTTCGACTTGGCCGCCCTCGATGAAGAGGCCATTGTCACCGTTGAAGAGTTCTCTTCATCTCTCTCCAAGCTGCTCACAATCGAAGATGAGAAGACTGATCAGGAGGAAATCGGCCGAAAGCAGAGGAGGCGCACAACTCCGATTAAAACTATCCCTGACCATCTTCTTCCCAGAGTTGCAATTGTGGGAAGACCGAATGTTGGTAAATCAGCGTTATTCAATCGACTTGTCTCGGGGAACAAGGCAATTGTAGTTGACGAGCCAGGGGTCACTAGGGATCGGCTGTATGGTAGGTCCTTTTGGGGGGACTTTGAATTTATGGTGGTGGATACTGGTGGTGTTCTTACAGTTTCAAAGTCACAGGCCAATGTCATGGAAGAATTGGCCATTTCAACTACTATTGGCATGGATGGAATTCCTCTTGCCTACAGAGAGGCAGCTGTTGCTAAGATGCCTTCAATGATTGAGAAACAAGCTACCGCAGCTGTCGATGAGTCATCTGTCATTATTTTTCTCGTTGATGGCCAGGCTGGTCTAACTGCAGCTGATGAAGAAATTTCAGATTGGCTACGTAGGAATTACTCAGATAAGTACATCATTCTTGCAGTCAACAAATGTGAATCTCCACGCAAAGGAGTCATGCAAGCATCAGAATTTTGGTCTTTGGGGTTTTCGCCACTTCCTATATCTGCTATATCTGGAACTGGAACTGGAGAGCTTCTCGATCTTGTGTGTTCAGGACTAAAAAAGATCGAGGATCCTGATGAATTTGCTGAAGAAGAAGAATATGTTCCTGCAATTGCAATTGTTGGTCGACCAAATGTTGGTAAAAGTAGCATTTTGAATGCTTTGGTTGGAGAGGACAGGACAATTGTTAGCCCAGTCAGTGGAACCACTCGGGATGCTATTGATATTGAATTCACTGGACCAGATGGACAGAAGTTTCGGCTTATTGACACTGCTGGAATCAGAAGAAAAGCTGTTGTTGCTTCATCAGGTAGCGTGACAGAGGCTTTATCTGTTAATCGAGCATTTCGTGCCATTCGCCGTTCGGATGTTGTGGCTCTTGTCATTGAGGCCATGGCTTGTATCACAGAACAGGATTGCAAGATTGCTGAAAGGATAGAAAAAGAAGGGAAAGGTTGCCTGATAGTTGTAAATAAATGGGATACTATACCGAATAAAAACCAGCAGACTGCAACATACTACGAGCAGGATATTAGGGAAAAACTTCGTATTCTTGATTGGGCTCCGGTTGTATATTCAACTGCACTAGCTGGTCGTAGTGTTGATAAAATTATCATGGCTGCTAGCACCGTTGAGAGAGAACGGTCAAGAAGGCTTACTACTGCCGTAGTGAATCAAGTAGTACAGGAGGCGCTAGCTTTTAAATCACCACCTAGGACACGAGGTGGCAAAAGAGGACGTATATATTACAGCACCCAGGCTGCTATAAGGCCACCGACATTTGTGTTCTTTGTTAATGATGCAAAACTTTTCCCTGAAACTTACCGTCGCTATATGGAGAAGCAACTGCGTTCAGATGCTGGGTTTGCCGGTACTCCACTTCGCCTTCTATGGAGTAACAGGAGGAAGACAGAAAGAGATGAAGGGAGAGCTACAACAAGGCCAAAAGGGAATCTTGTGCCACGTGACAAAAAATTGGAATTAGCTACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_dom-like MMR_HSR1

Protein Analysis

630

Amino Acids

69.55

Weight (kDa)

7.53

Isoelectric Point (pI)

49.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 128 - 275 6.9e-23 50S ribosome-binding GTPase
FeoB_N PF02421 128 - 190 1.5e-07 Ferrous iron transport protein B
MMR_HSR1 PF01926 337 - 458 2.6e-27 50S ribosome-binding GTPase
FeoB_N PF02421 337 - 503 1.5e-09 Ferrous iron transport protein B
KH_dom-like PF14714 517 - 597 1.6e-27 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 207
AccB7I CCANNNNNTGG 2 cut(s) 1034, 1097
AccI GTMKAC 1 cut(s) 1024
AccII CGCG 1 cut(s) 93
AclWI GGATC 3 cut(s) 495, 962, 975
AcoI YGGCCR 4 cut(s) 219, 322, 594, 733
AcsI RAATTY 6 cut(s) 524, 624, 765, 863, 977, 1127
AcuI CTGAAG 1 cut(s) 1005
AcvI CACGTG 1 cut(s) 1862
AcyI GRCGYC 1 cut(s) 204
AdeI CACNNNGTG 1 cut(s) 1622
AfaI GTAC 3 cut(s) 803, 1581, 1771
AfiI CCNNNNNNNGG 5 cut(s) 410, 513, 842, 1034, 1097
AgsI TTSAA 9 cut(s) 254, 430, 524, 564, 603, 669, 1054, 1127, 1476
AjnI CCWGG 3 cut(s) 472, 735, 1653
Alw21I GWGCWC 1 cut(s) 21
Alw26I GTCTC 3 cut(s) 32, 55, 445
AlwI GGATC 3 cut(s) 495, 962, 975
AlwNI CAGNNNCTG 2 cut(s) 185, 1757
Ama87I CYCGRG 2 cut(s) 442, 1107
AoxI GGCC 9 cut(s) 219, 237, 322, 573, 594, 733, 1287, 1667, 1838
ApeKI GCWGC 7 cut(s) 11, 280, 647, 692, 752, 1517, 1658
ApoI RAATTY 6 cut(s) 524, 624, 765, 863, 977, 1127
ArsI GACNNNNNNTTYG 4 cut(s) 194, 226, 1137, 1169
Asp700I GAANNNNTTC 2 cut(s) 999, 1440
AspA2I CCTAGG 1 cut(s) 1610
AspLEI GCGC 3 cut(s) 95, 342, 1591
AspS9I GGNCC 2 cut(s) 504, 1136
AsuHPI GGTGA 2 cut(s) 238, 1596
AsuNHI GCTAGC 2 cut(s) 1520, 1591
AvaI CYCGRG 2 cut(s) 442, 1107
AvaII GGWCC 2 cut(s) 504, 1136
AvrII CCTAGG 1 cut(s) 1610
BalI TGGCCA 2 cut(s) 596, 735
BamHI GGATCC 1 cut(s) 967
BanII GRGCYC 2 cut(s) 21, 1462
BarI GAAGNNNNNNTAC 2 cut(s) 1540, 1572
BauI CACGAG 1 cut(s) 1617
BbrPI CACGTG 1 cut(s) 1862
BbsI GAAGAC 3 cut(s) 308, 406, 1811
Bbv12I GWGCWC 1 cut(s) 21
BbvI GCAGC 7 cut(s) 23, 267, 659, 704, 764, 1504, 1645
BccI CCATC 4 cut(s) 378, 614, 725, 1136
BceAI ACGGC 2 cut(s) 1242, 1547
BciT130I CCWGG 3 cut(s) 474, 737, 1655
BciVI GTATCC 2 cut(s) 532, 1372
BclI TGATCA 2 cut(s) 157, 307
BcoDI GTCTC 3 cut(s) 32, 55, 445
BfaI CTAG 5 cut(s) 483, 1484, 1521, 1592, 1611
BfmI CTRYAG 2 cut(s) 637, 750
BfoI RGCGCY 1 cut(s) 1592
BfuI GTATCC 2 cut(s) 532, 1372
BlnI CCTAGG 1 cut(s) 1610
BlpI GCTNAGC 1 cut(s) 15
Bme1390I CCNGG 3 cut(s) 474, 737, 1655
Bme18I GGWCC 2 cut(s) 504, 1136
BmeT110I CYCGRG 2 cut(s) 442, 1107
BmgT120I GGNCC 2 cut(s) 504, 1136
BmiI GGNNCC 3 cut(s) 969, 1102, 1461
BmrFI CCNGG 3 cut(s) 474, 737, 1655
BmrI ACTGGG 1 cut(s) 1085
BmsI GCATC 5 cut(s) 651, 866, 1102, 1687, 1744
BmtI GCTAGC 2 cut(s) 1524, 1595
BmuI ACTGGG 1 cut(s) 1085
BpiI GAAGAC 3 cut(s) 308, 406, 1811
BplI GAGNNNNNCTC 2 cut(s) 915, 947
BpmI CTGGAG 1 cut(s) 942
Bpu1102I GCTNAGC 1 cut(s) 15
BsaAI YACGTR 3 cut(s) 782, 1862, 1887
BsaHI GRCGYC 1 cut(s) 204
BsaJI CCNNGG 4 cut(s) 473, 1290, 1610, 1653
BsaWI WCCGGW 1 cut(s) 1462
Bsc4I CCNNNNNNNGG 5 cut(s) 410, 513, 842, 1034, 1097
Bse118I RCCGGY 1 cut(s) 1766
Bse1I ACTGG 5 cut(s) 547, 919, 925, 1091, 1138
BseBI CCWGG 3 cut(s) 474, 737, 1655
BseDI CCNNGG 4 cut(s) 473, 1290, 1610, 1653
BseGI GGATG 3 cut(s) 625, 1117, 1270
BseLI CCNNNNNNNGG 5 cut(s) 410, 513, 842, 1034, 1097
BseMII CTCAG 2 cut(s) 6, 807
BseNI ACTGG 5 cut(s) 547, 919, 925, 1091, 1138
BseRI GAGGAG 1 cut(s) 349
BseX3I CGGCCG 1 cut(s) 322
BseXI GCAGC 7 cut(s) 23, 267, 659, 704, 764, 1504, 1645
BseYI CCCAGC 1 cut(s) 1757
BsgI GTGCAG 1 cut(s) 1464
Bsh1236I CGCG 1 cut(s) 93
Bsh1285I CGRYCG 1 cut(s) 325
BshFI GGCC 9 cut(s) 221, 239, 324, 575, 596, 735, 1289, 1669, 1840
BsiEI CGRYCG 1 cut(s) 325
BsiHKAI GWGCWC 1 cut(s) 21
BsiHKCI CYCGRG 2 cut(s) 442, 1107
BsiSI CCGG 2 cut(s) 1463, 1767
BslFI GGGAC 1 cut(s) 530
BslI CCNNNNNNNGG 5 cut(s) 410, 513, 842, 1034, 1097
BsmAI GTCTC 3 cut(s) 32, 55, 445
BsmBI CGTCTC 1 cut(s) 55
BsmFI GGGAC 1 cut(s) 530
BsmI GAATGC 1 cut(s) 1060
BsnI GGCC 9 cut(s) 221, 239, 324, 575, 596, 735, 1289, 1669, 1840
BsoBI CYCGRG 2 cut(s) 442, 1107
Bsp1286I GDGCHC 2 cut(s) 21, 1462
Bsp143I GATC 6 cut(s) 157, 307, 487, 934, 960, 967
Bsp1720I GCTNAGC 1 cut(s) 15
Bsp19I CCATGG 1 cut(s) 1290
BspANI GGCC 9 cut(s) 221, 239, 324, 575, 596, 735, 1289, 1669, 1840
BspCNI CTCAG 2 cut(s) 7, 806
BspFNI CGCG 1 cut(s) 93
BspLI GGNNCC 3 cut(s) 969, 1102, 1461
BspMAI CTGCAG 1 cut(s) 754
BspOI GCTAGC 2 cut(s) 1524, 1595
BspPI GGATC 3 cut(s) 495, 962, 975
BsrFI RCCGGY 1 cut(s) 1766
BsrI ACTGG 5 cut(s) 547, 919, 925, 1091, 1138
BssAI RCCGGY 1 cut(s) 1766
BssECI CCNNGG 4 cut(s) 473, 1290, 1610, 1653
BssMI GATC 6 cut(s) 157, 307, 487, 934, 960, 967
BssNI GRCGYC 1 cut(s) 204
BssSI CACGAG 1 cut(s) 1617
BssT1I CCWWGG 2 cut(s) 1290, 1610
Bst2BI CACGAG 1 cut(s) 1617
Bst2UI CCWGG 3 cut(s) 474, 737, 1655
Bst4CI ACNGT 5 cut(s) 250, 559, 1528, 1542, 1724
Bst6I CTCTTC 4 cut(s) 87, 228, 249, 268
BstACI GRCGYC 1 cut(s) 204
BstAPI GCANNNNNTGC 2 cut(s) 653, 1247
BstBAI YACGTR 3 cut(s) 782, 1862, 1887
BstC8I GCNNGC 3 cut(s) 855, 1522, 1593
BstDEI CTNAG 3 cut(s) 15, 657, 793
BstDSI CCRYGG 1 cut(s) 1290
BstF5I GGATG 3 cut(s) 625, 1117, 1270
BstFNI CGCG 1 cut(s) 93
BstH2I RGCGCY 1 cut(s) 1592
BstHHI GCGC 3 cut(s) 95, 342, 1591
BstKTI GATC 6 cut(s) 160, 310, 490, 937, 963, 970
BstMAI GTCTC 3 cut(s) 32, 55, 445
BstMBI GATC 6 cut(s) 157, 307, 487, 934, 960, 967
BstMCI CGRYCG 1 cut(s) 325
BstMWI GCNNNNNNNGC 7 cut(s) 129, 337, 653, 692, 1196, 1247, 1763
BstNI CCWGG 3 cut(s) 474, 737, 1655
BstSCI CCNGG 3 cut(s) 472, 735, 1653
BstSFI CTRYAG 2 cut(s) 637, 750
BstSNI TACGTA 1 cut(s) 782
BstUI CGCG 1 cut(s) 93
BstV1I GCAGC 7 cut(s) 23, 267, 659, 704, 764, 1504, 1645
BstV2I GAAGAC 3 cut(s) 308, 406, 1811
BstX2I RGATCY 1 cut(s) 967
BstXI CCANNNNNNTGG 1 cut(s) 583
BstYI RGATCY 1 cut(s) 967
BstZI CGGCCG 1 cut(s) 322
BsuI GTATCC 2 cut(s) 532, 1372
BsuRI GGCC 9 cut(s) 221, 239, 324, 575, 596, 735, 1289, 1669, 1840
BtgI CCRYGG 1 cut(s) 1290
BtsCI GGATG 3 cut(s) 625, 1117, 1270
BtsI GCAGTG 1 cut(s) 1167
BtsIMutI CAGTG 3 cut(s) 1102, 1131, 1167
Cac8I GCNNGC 3 cut(s) 855, 1522, 1593
CaiI CAGNNNCTG 2 cut(s) 185, 1757
CfoI GCGC 3 cut(s) 95, 342, 1591
Cfr10I RCCGGY 1 cut(s) 1766
Cfr13I GGNCC 2 cut(s) 504, 1136
Csp6I GTAC 3 cut(s) 802, 1580, 1770
CviAII CATG 5 cut(s) 583, 616, 850, 1291, 1513
CviQI GTAC 3 cut(s) 802, 1580, 1770
DdeI CTNAG 3 cut(s) 15, 657, 793
DpnI GATC 6 cut(s) 159, 309, 489, 936, 962, 969
DpnII GATC 6 cut(s) 157, 307, 487, 934, 960, 967
DraI TTTAAA 1 cut(s) 1600
DraIII CACNNNGTG 1 cut(s) 1622
EaeI YGGCCR 4 cut(s) 219, 322, 594, 733
EagI CGGCCG 1 cut(s) 322
Eam1104I CTCTTC 4 cut(s) 87, 228, 249, 268
EarI CTCTTC 4 cut(s) 87, 228, 249, 268
EciI GGCGGA 1 cut(s) 139
Ecl136II GAGCTC 1 cut(s) 19
EclXI CGGCCG 1 cut(s) 322
Eco105I TACGTA 1 cut(s) 782
Eco130I CCWWGG 2 cut(s) 1290, 1610
Eco24I GRGCYC 2 cut(s) 21, 1462
Eco47I GGWCC 2 cut(s) 504, 1136
Eco52I CGGCCG 1 cut(s) 322
Eco53kI GAGCTC 1 cut(s) 19
Eco57I CTGAAG 1 cut(s) 1005
Eco72I CACGTG 1 cut(s) 1862
Eco88I CYCGRG 2 cut(s) 442, 1107
EcoICRI GAGCTC 1 cut(s) 19
EcoO109I RGGNCCY 1 cut(s) 504
EcoRI GAATTC 2 cut(s) 624, 1127
EcoRII CCWGG 3 cut(s) 472, 735, 1653
EcoT14I CCWWGG 2 cut(s) 1290, 1610
EcoT38I GRGCYC 2 cut(s) 21, 1462
ErhI CCWWGG 2 cut(s) 1290, 1610
Esp3I CGTCTC 1 cut(s) 55
FaeI CATG 5 cut(s) 586, 619, 853, 1294, 1516
FalI AAGNNNNNCTT 2 cut(s) 1836, 1868
FaqI GGGAC 1 cut(s) 530
FatI CATG 5 cut(s) 582, 615, 849, 1290, 1512
FauI CCCGC 1 cut(s) 149
FbaI TGATCA 2 cut(s) 157, 307
FblI GTMKAC 1 cut(s) 1024
FokI GGATG 3 cut(s) 632, 1124, 1277
FriOI GRGCYC 2 cut(s) 21, 1462
FspBI CTAG 5 cut(s) 483, 1484, 1521, 1592, 1611
GlaI GCGC 3 cut(s) 94, 341, 1590
GsaI CCCAGC 1 cut(s) 1761
GsuI CTGGAG 1 cut(s) 942
HaeII RGCGCY 1 cut(s) 1592
HaeIII GGCC 9 cut(s) 221, 239, 324, 575, 596, 735, 1289, 1669, 1840
HapII CCGG 2 cut(s) 1463, 1767
HhaI GCGC 3 cut(s) 95, 342, 1591
Hin1I GRCGYC 1 cut(s) 204
Hin1II CATG 5 cut(s) 586, 619, 853, 1294, 1516
Hin6I GCGC 3 cut(s) 93, 340, 1589
HinP1I GCGC 3 cut(s) 93, 340, 1589
HincII GTYRAC 3 cut(s) 466, 820, 1025
HindII GTYRAC 3 cut(s) 466, 820, 1025
HinfI GANTC 7 cut(s) 197, 704, 830, 846, 1176, 1570, 1849
HpaII CCGG 2 cut(s) 1463, 1767
HphI GGTGA 2 cut(s) 238, 1596
Hpy166II GTNNAC 3 cut(s) 466, 820, 1025
Hpy188I TCNGA 8 cut(s) 202, 351, 772, 796, 862, 1181, 1264, 1753
Hpy188III TCNNGA 9 cut(s) 164, 311, 909, 932, 948, 971, 1109, 1451, 1545
Hpy8I GTNNAC 3 cut(s) 466, 820, 1025
Hpy99I CGWCG 3 cut(s) 206, 209, 1728
HpyAV CCTTC 6 cut(s) 119, 675, 1337, 1542, 1793, 1814
HpyCH4III ACNGT 5 cut(s) 250, 559, 1528, 1542, 1724
HpyCH4IV ACGT 5 cut(s) 204, 781, 1636, 1861, 1886
HpyF10VI GCNNNNNNNGC 7 cut(s) 129, 337, 653, 692, 1196, 1247, 1763
HpyF3I CTNAG 3 cut(s) 15, 657, 793
HpySE526I ACGT 5 cut(s) 204, 781, 1636, 1861, 1886
Hsp92I GRCGYC 1 cut(s) 204
Hsp92II CATG 5 cut(s) 586, 619, 853, 1294, 1516
HspAI GCGC 3 cut(s) 93, 340, 1589
Ksp22I TGATCA 2 cut(s) 157, 307
Kzo9I GATC 6 cut(s) 157, 307, 487, 934, 960, 967
LmnI GCTCC 1 cut(s) 1465
Lsp1109I GCAGC 7 cut(s) 23, 267, 659, 704, 764, 1504, 1645
LweI GCATC 5 cut(s) 651, 866, 1102, 1687, 1744
MaeI CTAG 5 cut(s) 483, 1484, 1521, 1592, 1611
MaeII ACGT 5 cut(s) 204, 781, 1636, 1861, 1886
MaeIII GTNAC 6 cut(s) 244, 478, 567, 1213, 1793, 1862
MalI GATC 6 cut(s) 159, 309, 489, 936, 962, 969
MboI GATC 6 cut(s) 157, 307, 487, 934, 960, 967
MfeI CAATTG 5 cut(s) 390, 456, 1008, 1014, 1080
MflI RGATCY 1 cut(s) 967
MhlI GDGCHC 2 cut(s) 21, 1462
MlsI TGGCCA 2 cut(s) 596, 735
MluNI TGGCCA 2 cut(s) 596, 735
MlyI GAGTC 3 cut(s) 206, 713, 855
MmeI TCCRAC 2 cut(s) 225, 1045
Mox20I TGGCCA 2 cut(s) 596, 735
MroXI GAANNNNTTC 2 cut(s) 999, 1440
MscI TGGCCA 2 cut(s) 596, 735
MseI TTAA 4 cut(s) 354, 1233, 1599, 1692
MslI CAYNNNNRTG 1 cut(s) 165
Msp20I TGGCCA 2 cut(s) 596, 735
MspA1I CMGCKG 5 cut(s) 14, 155, 650, 695, 755
MspI CCGG 2 cut(s) 1463, 1767
MspR9I CCNGG 3 cut(s) 474, 737, 1655
MunI CAATTG 5 cut(s) 390, 456, 1008, 1014, 1080
Mva1269I GAATGC 1 cut(s) 1060
MvaI CCWGG 3 cut(s) 474, 737, 1655
MvnI CGCG 1 cut(s) 93
MwoI GCNNNNNNNGC 7 cut(s) 129, 337, 653, 692, 1196, 1247, 1763
NcoI CCATGG 1 cut(s) 1290
NdeII GATC 6 cut(s) 157, 307, 487, 934, 960, 967
NheI GCTAGC 2 cut(s) 1520, 1591
NlaIII CATG 5 cut(s) 586, 619, 853, 1294, 1516
NlaIV GGNNCC 3 cut(s) 969, 1102, 1461
NmuCI GTSAC 5 cut(s) 244, 478, 567, 1213, 1862
PcsI WCGNNNNNNNCGW 2 cut(s) 210, 1243
PctI GAATGC 1 cut(s) 1060
PdmI GAANNNNTTC 2 cut(s) 999, 1440
PfeI GAWTC 4 cut(s) 830, 1176, 1570, 1849
PflMI CCANNNNNTGG 2 cut(s) 1034, 1097
PleI GAGTC 3 cut(s) 205, 712, 854
PmaCI CACGTG 1 cut(s) 1862
PmlI CACGTG 1 cut(s) 1862
PpsI GAGTC 3 cut(s) 205, 712, 854
Ppu21I YACGTR 3 cut(s) 782, 1862, 1887
PpuMI RGGWCCY 1 cut(s) 504
Psp124BI GAGCTC 1 cut(s) 21
Psp5II RGGWCCY 1 cut(s) 504
Psp6I CCWGG 3 cut(s) 472, 735, 1653
PspCI CACGTG 1 cut(s) 1862
PspFI CCCAGC 1 cut(s) 1757
PspGI CCWGG 3 cut(s) 472, 735, 1653
PspN4I GGNNCC 3 cut(s) 969, 1102, 1461
PspPI GGNCC 2 cut(s) 504, 1136
PspPPI RGGWCCY 1 cut(s) 504
PstI CTGCAG 1 cut(s) 754
PstNI CAGNNNCTG 2 cut(s) 185, 1757
PsuI RGATCY 1 cut(s) 967
PvuII CAGCTG 4 cut(s) 14, 650, 695, 755
RsaI GTAC 3 cut(s) 803, 1581, 1771
RsaNI GTAC 3 cut(s) 802, 1580, 1770
RseI CAYNNNNRTG 1 cut(s) 165
SacI GAGCTC 1 cut(s) 21
SalI GTCGAC 1 cut(s) 1023
SaqAI TTAA 4 cut(s) 354, 1233, 1599, 1692
Sau3AI GATC 6 cut(s) 157, 307, 487, 934, 960, 967
Sau96I GGNCC 2 cut(s) 504, 1136
SchI GAGTC 3 cut(s) 206, 713, 855
ScrFI CCNGG 3 cut(s) 474, 737, 1655
SduI GDGCHC 2 cut(s) 21, 1462
SfaNI GCATC 5 cut(s) 651, 866, 1102, 1687, 1744
SfcI CTRYAG 2 cut(s) 637, 750
SinI GGWCC 2 cut(s) 504, 1136
SmiMI CAYNNNNRTG 1 cut(s) 165
SnaBI TACGTA 1 cut(s) 782
SspMI CTAG 5 cut(s) 483, 1484, 1521, 1592, 1611
SstI GAGCTC 1 cut(s) 21
StyD4I CCNGG 3 cut(s) 472, 735, 1653
StyI CCWWGG 2 cut(s) 1290, 1610
TaaI ACNGT 5 cut(s) 250, 559, 1528, 1542, 1724
TaiI ACGT 5 cut(s) 207, 784, 1639, 1864, 1889
TaqII GACCGA 1 cut(s) 418
TatI WGTACW 2 cut(s) 801, 1579
TauI GCSGC 5 cut(s) 126, 129, 132, 155, 224
TfiI GAWTC 4 cut(s) 830, 1176, 1570, 1849
Tru1I TTAA 4 cut(s) 354, 1233, 1599, 1692
Tru9I TTAA 4 cut(s) 354, 1233, 1599, 1692
TscAI CASTG 3 cut(s) 1102, 1138, 1174
TseFI GTSAC 5 cut(s) 244, 478, 567, 1213, 1862
TseI GCWGC 7 cut(s) 11, 280, 647, 692, 752, 1517, 1658
Tsp45I GTSAC 5 cut(s) 244, 478, 567, 1213, 1862
TspDTI ATGAA 6 cut(s) 246, 255, 774, 990, 1191, 1833
TspGWI ACGGA 1 cut(s) 204
TspRI CASTG 3 cut(s) 1102, 1138, 1174
Van91I CCANNNNNTGG 2 cut(s) 1034, 1097
VpaK11BI GGWCC 2 cut(s) 504, 1136
XapI RAATTY 6 cut(s) 524, 624, 765, 863, 977, 1127
XmaJI CCTAGG 1 cut(s) 1610
XmiI GTMKAC 1 cut(s) 1024
XmnI GAANNNNTTC 2 cut(s) 999, 1440
XspI CTAG 5 cut(s) 483, 1484, 1521, 1592, 1611
ZraI GACGTC 1 cut(s) 205
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.