Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0003456.1

Orthogroup ID

OG0001492

Physical Location & Seq

Genomic Coordinates Forward (+)

3813 .. 12120

Gene Structure 8308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0003456.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

atggcagcagctgctgagctcttcttgtctggcggaggaggagcaaccaccgctctgtccaaaaccctatctcttgtttcttccccatttcccaaatcaattcttcatcttctccgcaccactccctcctccccttccctttccctccaccaccaccaccacgcttctcgtcttcctctccgcttgctctccgccactgacgtttccctaacagacgacgacgaagaacaagaactagaaccagaaccagaaccagaagcagagggagatgagtccgacgtcgatttggacgtcgacgccctcgaacaagacgcccttctcgccgtccgagacttctcttcatctctctccaaccagctcacaatcgaagatgagaaaactgatcaagaggcactcggccgaaagcagaggaggcagaaaactccaatcaaaaataaaactatccctgaccatcttcttccgagagttgcaattgttggaagaccaaatgttggtaaatcagcattattcaatcgacttgtctcggggaacaaggcaattgtagttgatgagccaggggtcactagggatcgcctgtatggtagatccttttggggggactttgaatttatggtggtggatactggtggtgttcttacagtttcaaagtcacaggccaacgtcatggaagaactggccatttcaacgaccgttggtatggatggaattccacttgcctccagagaggcagcggttgcacggatgccctcaatgattgagaaacaagctactgcagctgttgaagagtcatctgtcattatttttcttgttgatggccaggctggtctaactgcagctgacgaggaaatttcagattggctacgtaggaacttctcagataagtacatcattcttgcagtcaacaaatgtgaatctccacgtaagggagtcatgcaagcatcagagttttggtccttggggttttcgccgcttcctatatctgctatatctggaactggaaccggagagcttctcgatcttgtgtgttcaggcctaaaaaagattgaggatcctgatgattttgctgaacaagaggattatgttcctgcaattgcaattgttggtcgaccaaatgttggtaaaagtagcattttgaacgcgttggttggagaagacaggacaattgttagcccagtcagtggaactactcgcgatgctattgatattgaattcactggaccagatggacagaagttccggcttattgacactgccggaatcagaagaaaagccgttgttgcttcatcaggtagtgtgacagaggctttatcagttaatcgagcatttcgtgccattcgccgttctgatgttgtggctcttgtcattgaggccatggcttgtataacagaacaggattgcaagattgctgaaaggatagaaagagaagggaaaggttgcctgatagttgtcaacaaatgggacactataccaaataaaaaccagcagactgcaacatactacgagcaggatgtgagggaaaagcttcgtattcttgattgggcgccggttgtatattcaactgcactagctggtcgtagtgttgataaaattatcatggctgctagcactgttgagaaagaacggtcaagaaggcttacgactgctgtggtaaatcaagtggtacaggaggcactagcttttaaatcaccacctaggacacgaggtggcaaaagaggacgtatttattacagcactcaggctgctataaggccaccaacatttgtattctttgttaatgatgcgaaacttttccctgaaacttatcgtcgctatatggagaagcaactgcgttcagatgctgggtttgcgggtactccaattcgccttttatggagcaacaggaggaagacagaaagagatgaagggagagctacaacaaggacaaaagggaatcttgtgccacgtgacaaaaaattggaattagctacatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_dom-like MMR_HSR1

Protein Analysis

656

Amino Acids

71.92

Weight (kDa)

5.9

Isoelectric Point (pI)

47.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12080 AT3G12080
fragaria_vesca	FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400
malus_domestica	MD03G1176500.v1.1 MD11G1197100.v1.1
prunus_persica	Prupe.4G247300_v2.0.a1
pyrus_communis	pycom03g13380 pycom11g16990
rosa_chinensis	RchiOBHm_Chr3g0490621
rosa_laevigata	RLG00000022879
rosa_multiflora	Rmu_co8408199.1_g000001 Rmu_sc0003456.1_g000004 Rmu_sc0007326.1_g000005
rosa_roxburghii	Rroxscaffold_6G00393360
rosa_rugosa	Rorug03G0244800 Rorug04G0071000
rosa_samantha	Rh3AG294100 Rh3BG330300 Rh3DG327200
rosa_wichuraiana	Rw3G026010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	282, 294
AccB1I	GGYRCC	1 cut(s)	1540
AccB7I	CCANNNNNTGG	3 cut(s)	491, 1115, 1178
AccBSI	CCGCTC	1 cut(s)	53
AccI	GTMKAC	2 cut(s)	294, 1105
AccII	CGCG	2 cut(s)	1139, 1191
AciI	CCGC	8 cut(s)	33, 51, 115, 181, 192, 731, 968, 1847
AclWI	GGATC	4 cut(s)	576, 579, 1043, 1056
AcoI	YGGCCR	3 cut(s)	397, 675, 814
AcsI	RAATTY	4 cut(s)	605, 705, 846, 1208
AcvI	CACGTG	1 cut(s)	1943
AcyI	GRCGYC	5 cut(s)	279, 291, 297, 312, 1541
AdeI	CACNNNGTG	1 cut(s)	1703
AfaI	GTAC	3 cut(s)	884, 1662, 1852
AfiI	CCNNNNNNNGG	5 cut(s)	491, 594, 923, 1115, 1178
AflIII	ACRYGT	1 cut(s)	1137
AgsI	TTSAA	8 cut(s)	511, 605, 645, 684, 782, 1135, 1208, 1557
AjnI	CCWGG	2 cut(s)	553, 816
Alw21I	GWGCWC	1 cut(s)	21
Alw26I	GTCTC	2 cut(s)	324, 526
AlwI	GGATC	4 cut(s)	576, 579, 1043, 1056
AlwNI	CAGNNNCTG	3 cut(s)	11, 14, 1838
Ama87I	CYCGRG	1 cut(s)	523
AoxI	GGCC	7 cut(s)	397, 654, 675, 814, 1030, 1368, 1748
ApeKI	GCWGC	8 cut(s)	5, 8, 11, 728, 773, 833, 1598, 1739
ApoI	RAATTY	4 cut(s)	605, 705, 846, 1208
Asp700I	GAANNNNTTC	2 cut(s)	1521, 1787
AspA2I	CCTAGG	1 cut(s)	1691
AspLEI	GCGC	1 cut(s)	1543
AspS9I	GGNCC	2 cut(s)	951, 1217
AsuHPI	GGTGA	1 cut(s)	1677
AsuNHI	GCTAGC	1 cut(s)	1601
AvaI	CYCGRG	1 cut(s)	523
AvaII	GGWCC	2 cut(s)	951, 1217
AvrII	CCTAGG	1 cut(s)	1691
BalI	TGGCCA	2 cut(s)	677, 816
BamHI	GGATCC	1 cut(s)	1048
BanI	GGYRCC	1 cut(s)	1540
BanII	GRGCYC	1 cut(s)	21
BauI	CACGAG	1 cut(s)	1698
BbrPI	CACGTG	1 cut(s)	1943
BbsI	GAAGAC	4 cut(s)	164, 487, 1158, 1892
Bbv12I	GWGCWC	1 cut(s)	21
BbvI	GCAGC	7 cut(s)	17, 20, 740, 785, 845, 1585, 1726
BccI	CCATC	4 cut(s)	459, 695, 806, 1217
BceAI	ACGGC	3 cut(s)	308, 1256, 1323
BciT130I	CCWGG	2 cut(s)	555, 818
BciVI	GTATCC	1 cut(s)	613
BclI	TGATCA	1 cut(s)	382
BcoDI	GTCTC	2 cut(s)	324, 526
BfaI	CTAG	6 cut(s)	236, 564, 1565, 1602, 1673, 1692
BfmI	CTRYAG	2 cut(s)	771, 831
BfoI	RGCGCY	1 cut(s)	1544
BfuI	GTATCC	1 cut(s)	613
BisI	GCNGC	9 cut(s)	6, 9, 12, 729, 774, 834, 968, 1599, 1740
BlnI	CCTAGG	1 cut(s)	1691
BlpI	GCTNAGC	1 cut(s)	15
BlsI	GCNGC	9 cut(s)	7, 10, 13, 730, 775, 835, 969, 1600, 1741
Bme1390I	CCNGG	2 cut(s)	555, 818
Bme18I	GGWCC	2 cut(s)	951, 1217
BmeT110I	CYCGRG	1 cut(s)	523
BmgT120I	GGNCC	2 cut(s)	951, 1217
BmiI	GGNNCC	3 cut(s)	1000, 1050, 1542
BmrFI	CCNGG	2 cut(s)	555, 818
BmrI	ACTGGG	1 cut(s)	1166
BmsI	GCATC	5 cut(s)	732, 947, 1183, 1768, 1825
BmtI	GCTAGC	1 cut(s)	1605
BmuI	ACTGGG	1 cut(s)	1166
BpiI	GAAGAC	4 cut(s)	164, 487, 1158, 1892
BplI	GAGNNNNNCTC	2 cut(s)	996, 1028
BpmI	CTGGAG	1 cut(s)	703
Bpu1102I	GCTNAGC	1 cut(s)	15
BsaAI	YACGTR	3 cut(s)	863, 920, 1943
BsaHI	GRCGYC	5 cut(s)	279, 291, 297, 312, 1541
BsaJI	CCNNGG	4 cut(s)	554, 954, 1371, 1691
BsaWI	WCCGGW	1 cut(s)	1001
Bsc4I	CCNNNNNNNGG	5 cut(s)	491, 594, 923, 1115, 1178
Bse118I	RCCGGY	1 cut(s)	1543
Bse1I	ACTGG	5 cut(s)	628, 678, 1000, 1172, 1219
BseBI	CCWGG	2 cut(s)	555, 818
BseDI	CCNNGG	4 cut(s)	554, 954, 1371, 1691
BseGI	GGATG	3 cut(s)	706, 747, 1513
BseLI	CCNNNNNNNGG	5 cut(s)	491, 594, 923, 1115, 1178
BseMII	CTCAG	3 cut(s)	6, 888, 1748
BseNI	ACTGG	5 cut(s)	628, 678, 1000, 1172, 1219
BseRI	GAGGAG	4 cut(s)	51, 54, 118, 424
BseX3I	CGGCCG	1 cut(s)	397
BseXI	GCAGC	7 cut(s)	17, 20, 740, 785, 845, 1585, 1726
BseYI	CCCAGC	1 cut(s)	1838
BsgI	GTGCAG	1 cut(s)	1545
Bsh1236I	CGCG	2 cut(s)	1139, 1191
Bsh1285I	CGRYCG	2 cut(s)	400, 690
BshFI	GGCC	7 cut(s)	399, 656, 677, 816, 1032, 1370, 1750
BshNI	GGYRCC	1 cut(s)	1540
BsiEI	CGRYCG	2 cut(s)	400, 690
BsiHKAI	GWGCWC	1 cut(s)	21
BsiHKCI	CYCGRG	1 cut(s)	523
BsiSI	CCGG	4 cut(s)	1002, 1237, 1254, 1544
BslFI	GGGAC	2 cut(s)	611, 1472
BslI	CCNNNNNNNGG	5 cut(s)	491, 594, 923, 1115, 1178
BsmAI	GTCTC	2 cut(s)	324, 526
BsmFI	GGGAC	2 cut(s)	611, 1472
BsnI	GGCC	7 cut(s)	399, 656, 677, 816, 1032, 1370, 1750
BsoBI	CYCGRG	1 cut(s)	523
Bsp1286I	GDGCHC	1 cut(s)	21
Bsp143I	GATC	5 cut(s)	382, 568, 584, 1015, 1048
Bsp1720I	GCTNAGC	1 cut(s)	15
Bsp19I	CCATGG	1 cut(s)	1371
Bsp68I	TCGCGA	1 cut(s)	1191
BspACI	CCGC	8 cut(s)	33, 51, 115, 181, 192, 731, 968, 1847
BspANI	GGCC	7 cut(s)	399, 656, 677, 816, 1032, 1370, 1750
BspCNI	CTCAG	3 cut(s)	7, 887, 1747
BspFNI	CGCG	2 cut(s)	1139, 1191
BspLI	GGNNCC	3 cut(s)	1000, 1050, 1542
BspMAI	CTGCAG	2 cut(s)	775, 835
BspOI	GCTAGC	1 cut(s)	1605
BspPI	GGATC	4 cut(s)	576, 579, 1043, 1056
BspQI	GCTCTTC	1 cut(s)	26
BspT107I	GGYRCC	1 cut(s)	1540
BsrBI	CCGCTC	1 cut(s)	53
BsrFI	RCCGGY	1 cut(s)	1543
BsrI	ACTGG	5 cut(s)	628, 678, 1000, 1172, 1219
BssAI	RCCGGY	1 cut(s)	1543
BssECI	CCNNGG	4 cut(s)	554, 954, 1371, 1691
BssMI	GATC	5 cut(s)	382, 568, 584, 1015, 1048
BssNI	GRCGYC	5 cut(s)	279, 291, 297, 312, 1541
BssSI	CACGAG	1 cut(s)	1698
BssT1I	CCWWGG	3 cut(s)	954, 1371, 1691
Bst2BI	CACGAG	1 cut(s)	1698
Bst2UI	CCWGG	2 cut(s)	555, 818
Bst4CI	ACNGT	4 cut(s)	640, 691, 1609, 1623
Bst6I	CTCTTC	3 cut(s)	26, 343, 777
BstACI	GRCGYC	5 cut(s)	279, 291, 297, 312, 1541
BstAPI	GCANNNNNTGC	3 cut(s)	11, 734, 1328
BstBAI	YACGTR	3 cut(s)	863, 920, 1943
BstC8I	GCNNGC	3 cut(s)	185, 936, 1603
BstDEI	CTNAG	3 cut(s)	15, 874, 1734
BstDSI	CCRYGG	1 cut(s)	1371
BstF5I	GGATG	3 cut(s)	706, 747, 1513
BstFNI	CGCG	2 cut(s)	1139, 1191
BstH2I	RGCGCY	1 cut(s)	1544
BstHHI	GCGC	1 cut(s)	1543
BstKTI	GATC	5 cut(s)	385, 571, 587, 1018, 1051
BstMAI	GTCTC	2 cut(s)	324, 526
BstMBI	GATC	5 cut(s)	382, 568, 584, 1015, 1048
BstMCI	CGRYCG	2 cut(s)	400, 690
BstMWI	GCNNNNNNNGC	9 cut(s)	11, 50, 320, 412, 734, 773, 1277, 1328, 1844
BstNI	CCWGG	2 cut(s)	555, 818
BstSCI	CCNGG	2 cut(s)	553, 816
BstSFI	CTRYAG	2 cut(s)	771, 831
BstSNI	TACGTA	1 cut(s)	863
BstUI	CGCG	2 cut(s)	1139, 1191
BstV1I	GCAGC	7 cut(s)	17, 20, 740, 785, 845, 1585, 1726
BstV2I	GAAGAC	4 cut(s)	164, 487, 1158, 1892
BstX2I	RGATCY	2 cut(s)	584, 1048
BstXI	CCANNNNNNTGG	1 cut(s)	664
BstYI	RGATCY	2 cut(s)	584, 1048
BstZI	CGGCCG	1 cut(s)	397
BsuI	GTATCC	1 cut(s)	613
BsuRI	GGCC	7 cut(s)	399, 656, 677, 816, 1032, 1370, 1750
BtgI	CCRYGG	1 cut(s)	1371
BtgZI	GCGATG	1 cut(s)	1206
BtsCI	GGATG	3 cut(s)	706, 747, 1513
BtsI	GCAGTG	1 cut(s)	1248
BtsIMutI	CAGTG	5 cut(s)	195, 1183, 1212, 1248, 1605
BtuMI	TCGCGA	1 cut(s)	1191
Cac8I	GCNNGC	3 cut(s)	185, 936, 1603
CaiI	CAGNNNCTG	3 cut(s)	11, 14, 1838
CfoI	GCGC	1 cut(s)	1543
Cfr10I	RCCGGY	1 cut(s)	1543
Cfr13I	GGNCC	2 cut(s)	951, 1217
CseI	GACGC	2 cut(s)	305, 320
Csp6I	GTAC	3 cut(s)	883, 1661, 1851
CviAII	CATG	5 cut(s)	664, 931, 1372, 1594, 1968
CviQI	GTAC	3 cut(s)	883, 1661, 1851
DdeI	CTNAG	3 cut(s)	15, 874, 1734
DinI	GGCGCC	1 cut(s)	1542
DpnI	GATC	5 cut(s)	384, 570, 586, 1017, 1050
DpnII	GATC	5 cut(s)	382, 568, 584, 1015, 1048
DraI	TTTAAA	1 cut(s)	1681
DraIII	CACNNNGTG	1 cut(s)	1703
EaeI	YGGCCR	3 cut(s)	397, 675, 814
EagI	CGGCCG	1 cut(s)	397
Eam1104I	CTCTTC	3 cut(s)	26, 343, 777
EarI	CTCTTC	3 cut(s)	26, 343, 777
EciI	GGCGGA	2 cut(s)	48, 181
Ecl136II	GAGCTC	1 cut(s)	19
EclXI	CGGCCG	1 cut(s)	397
Eco105I	TACGTA	1 cut(s)	863
Eco130I	CCWWGG	3 cut(s)	954, 1371, 1691
Eco147I	AGGCCT	1 cut(s)	1032
Eco24I	GRGCYC	1 cut(s)	21
Eco47I	GGWCC	2 cut(s)	951, 1217
Eco52I	CGGCCG	1 cut(s)	397
Eco53kI	GAGCTC	1 cut(s)	19
Eco72I	CACGTG	1 cut(s)	1943
Eco88I	CYCGRG	1 cut(s)	523
EcoICRI	GAGCTC	1 cut(s)	19
EcoRI	GAATTC	2 cut(s)	705, 1208
EcoRII	CCWGG	2 cut(s)	553, 816
EcoT14I	CCWWGG	3 cut(s)	954, 1371, 1691
EcoT38I	GRGCYC	1 cut(s)	21
EgeI	GGCGCC	1 cut(s)	1542
EheI	GGCGCC	1 cut(s)	1542
ErhI	CCWWGG	3 cut(s)	954, 1371, 1691
FaeI	CATG	5 cut(s)	667, 934, 1375, 1597, 1971
FalI	AAGNNNNNCTT	4 cut(s)	300, 332, 1917, 1949
FaqI	GGGAC	2 cut(s)	611, 1472
FatI	CATG	5 cut(s)	663, 930, 1371, 1593, 1967
FauI	CCCGC	1 cut(s)	1840
FbaI	TGATCA	1 cut(s)	382
FblI	GTMKAC	2 cut(s)	294, 1105
Fnu4HI	GCNGC	9 cut(s)	6, 9, 12, 729, 774, 834, 968, 1599, 1740
FokI	GGATG	3 cut(s)	713, 754, 1520
FriOI	GRGCYC	1 cut(s)	21
Fsp4HI	GCNGC	9 cut(s)	6, 9, 12, 729, 774, 834, 968, 1599, 1740
FspBI	CTAG	6 cut(s)	236, 564, 1565, 1602, 1673, 1692
GlaI	GCGC	1 cut(s)	1542
GluI	GCNGC	9 cut(s)	6, 9, 12, 729, 774, 834, 968, 1599, 1740
GsaI	CCCAGC	1 cut(s)	1842
GsuI	CTGGAG	1 cut(s)	703
HaeII	RGCGCY	1 cut(s)	1544
HaeIII	GGCC	7 cut(s)	399, 656, 677, 816, 1032, 1370, 1750
HapII	CCGG	4 cut(s)	1002, 1237, 1254, 1544
HgaI	GACGC	2 cut(s)	305, 320
HhaI	GCGC	1 cut(s)	1543
Hin1I	GRCGYC	5 cut(s)	279, 291, 297, 312, 1541
Hin1II	CATG	5 cut(s)	667, 934, 1375, 1597, 1971
Hin6I	GCGC	1 cut(s)	1541
HinP1I	GCGC	1 cut(s)	1541
HincII	GTYRAC	4 cut(s)	295, 901, 1106, 1450
HindII	GTYRAC	4 cut(s)	295, 901, 1106, 1450
HindIII	AAGCTT	1 cut(s)	1520
HinfI	GANTC	6 cut(s)	272, 785, 911, 927, 1257, 1930
HpaII	CCGG	4 cut(s)	1002, 1237, 1254, 1544
HphI	GGTGA	1 cut(s)	1677
Hpy166II	GTNNAC	4 cut(s)	295, 901, 1106, 1450
Hpy188I	TCNGA	9 cut(s)	277, 329, 462, 853, 877, 943, 1262, 1345, 1834
Hpy188III	TCNNGA	8 cut(s)	386, 720, 990, 1013, 1052, 1190, 1532, 1626
Hpy8I	GTNNAC	4 cut(s)	295, 901, 1106, 1450
Hpy99I	CGWCG	7 cut(s)	221, 224, 281, 284, 296, 299, 1809
HpyAV	CCTTC	5 cut(s)	144, 326, 1418, 1623, 1895
HpyCH4III	ACNGT	4 cut(s)	640, 691, 1609, 1623
HpyCH4IV	ACGT	8 cut(s)	201, 279, 291, 660, 862, 919, 1717, 1942
HpyF10VI	GCNNNNNNNGC	9 cut(s)	11, 50, 320, 412, 734, 773, 1277, 1328, 1844
HpyF3I	CTNAG	3 cut(s)	15, 874, 1734
HpySE526I	ACGT	8 cut(s)	201, 279, 291, 660, 862, 919, 1717, 1942
Hsp92I	GRCGYC	5 cut(s)	279, 291, 297, 312, 1541
Hsp92II	CATG	5 cut(s)	667, 934, 1375, 1597, 1971
HspAI	GCGC	1 cut(s)	1541
KasI	GGCGCC	1 cut(s)	1540
Ksp22I	TGATCA	1 cut(s)	382
Kzo9I	GATC	5 cut(s)	382, 568, 584, 1015, 1048
LguI	GCTCTTC	1 cut(s)	26
LmnI	GCTCC	2 cut(s)	41, 1872
Lsp1109I	GCAGC	7 cut(s)	17, 20, 740, 785, 845, 1585, 1726
LweI	GCATC	5 cut(s)	732, 947, 1183, 1768, 1825
MaeI	CTAG	6 cut(s)	236, 564, 1565, 1602, 1673, 1692
MaeII	ACGT	8 cut(s)	201, 279, 291, 660, 862, 919, 1717, 1942
MaeIII	GTNAC	4 cut(s)	559, 648, 1294, 1943
MalI	GATC	5 cut(s)	384, 570, 586, 1017, 1050
MbiI	CCGCTC	1 cut(s)	53
MboI	GATC	5 cut(s)	382, 568, 584, 1015, 1048
MfeI	CAATTG	5 cut(s)	471, 537, 1089, 1095, 1161
MflI	RGATCY	2 cut(s)	584, 1048
MhlI	GDGCHC	1 cut(s)	21
MlsI	TGGCCA	2 cut(s)	677, 816
MluI	ACGCGT	1 cut(s)	1137
MluNI	TGGCCA	2 cut(s)	677, 816
Mly113I	GGCGCC	1 cut(s)	1541
MlyI	GAGTC	3 cut(s)	281, 794, 936
MmeI	TCCRAC	4 cut(s)	300, 375, 457, 1126
Mox20I	TGGCCA	2 cut(s)	677, 816
MroXI	GAANNNNTTC	2 cut(s)	1521, 1787
MscI	TGGCCA	2 cut(s)	677, 816
MseI	TTAA	3 cut(s)	1314, 1680, 1773
Msp20I	TGGCCA	2 cut(s)	677, 816
MspA1I	CMGCKG	4 cut(s)	11, 731, 776, 836
MspI	CCGG	4 cut(s)	1002, 1237, 1254, 1544
MspR9I	CCNGG	2 cut(s)	555, 818
MunI	CAATTG	5 cut(s)	471, 537, 1089, 1095, 1161
MvaI	CCWGG	2 cut(s)	555, 818
MvnI	CGCG	2 cut(s)	1139, 1191
MwoI	GCNNNNNNNGC	9 cut(s)	11, 50, 320, 412, 734, 773, 1277, 1328, 1844
NarI	GGCGCC	1 cut(s)	1541
NcoI	CCATGG	1 cut(s)	1371
NdeII	GATC	5 cut(s)	382, 568, 584, 1015, 1048
NheI	GCTAGC	1 cut(s)	1601
NlaIII	CATG	5 cut(s)	667, 934, 1375, 1597, 1971
NlaIV	GGNNCC	3 cut(s)	1000, 1050, 1542
NmeAIII	GCCGAG	1 cut(s)	375
NmuCI	GTSAC	4 cut(s)	559, 648, 1294, 1943
NruI	TCGCGA	1 cut(s)	1191
PceI	AGGCCT	1 cut(s)	1032
PciSI	GCTCTTC	1 cut(s)	26
PcsI	WCGNNNNNNNCGW	3 cut(s)	288, 300, 1324
PdmI	GAANNNNTTC	2 cut(s)	1521, 1787
PfeI	GAWTC	3 cut(s)	911, 1257, 1930
PflMI	CCANNNNNTGG	3 cut(s)	491, 1115, 1178
PkrI	GCNGC	9 cut(s)	7, 10, 13, 730, 775, 835, 969, 1600, 1741
PleI	GAGTC	3 cut(s)	280, 793, 935
PluTI	GGCGCC	1 cut(s)	1544
PmaCI	CACGTG	1 cut(s)	1943
PmlI	CACGTG	1 cut(s)	1943
PpsI	GAGTC	3 cut(s)	280, 793, 935
Ppu21I	YACGTR	3 cut(s)	863, 920, 1943
Psp124BI	GAGCTC	1 cut(s)	21
Psp6I	CCWGG	2 cut(s)	553, 816
PspCI	CACGTG	1 cut(s)	1943
PspFI	CCCAGC	1 cut(s)	1838
PspGI	CCWGG	2 cut(s)	553, 816
PspN4I	GGNNCC	3 cut(s)	1000, 1050, 1542
PspPI	GGNCC	2 cut(s)	951, 1217
PstI	CTGCAG	2 cut(s)	775, 835
PstNI	CAGNNNCTG	3 cut(s)	11, 14, 1838
PsuI	RGATCY	2 cut(s)	584, 1048
PvuII	CAGCTG	3 cut(s)	11, 776, 836
RruI	TCGCGA	1 cut(s)	1191
RsaI	GTAC	3 cut(s)	884, 1662, 1852
RsaNI	GTAC	3 cut(s)	883, 1661, 1851
SacI	GAGCTC	1 cut(s)	21
SalI	GTCGAC	2 cut(s)	293, 1104
SapI	GCTCTTC	1 cut(s)	26
SaqAI	TTAA	3 cut(s)	1314, 1680, 1773
SatI	GCNGC	9 cut(s)	6, 9, 12, 729, 774, 834, 968, 1599, 1740
Sau3AI	GATC	5 cut(s)	382, 568, 584, 1015, 1048
Sau96I	GGNCC	2 cut(s)	951, 1217
SchI	GAGTC	3 cut(s)	281, 794, 936
ScrFI	CCNGG	2 cut(s)	555, 818
SduI	GDGCHC	1 cut(s)	21
SfaNI	GCATC	5 cut(s)	732, 947, 1183, 1768, 1825
SfcI	CTRYAG	2 cut(s)	771, 831
SfoI	GGCGCC	1 cut(s)	1542
SgrDI	CGTCGACG	1 cut(s)	293
SinI	GGWCC	2 cut(s)	951, 1217
SnaBI	TACGTA	1 cut(s)	863
SseBI	AGGCCT	1 cut(s)	1032
SsiI	CCGC	8 cut(s)	33, 51, 115, 181, 192, 731, 968, 1847
SspDI	GGCGCC	1 cut(s)	1540
SspMI	CTAG	6 cut(s)	236, 564, 1565, 1602, 1673, 1692
SstI	GAGCTC	1 cut(s)	21
StuI	AGGCCT	1 cut(s)	1032
StyD4I	CCNGG	2 cut(s)	553, 816
StyI	CCWWGG	3 cut(s)	954, 1371, 1691
TaaI	ACNGT	4 cut(s)	640, 691, 1609, 1623
TaiI	ACGT	8 cut(s)	204, 282, 294, 663, 865, 922, 1720, 1945
TaqI	TCGA	8 cut(s)	282, 294, 303, 366, 514, 1014, 1105, 1318
TatI	WGTACW	1 cut(s)	882
TauI	GCSGC	1 cut(s)	970
TfiI	GAWTC	3 cut(s)	911, 1257, 1930
Tru1I	TTAA	3 cut(s)	1314, 1680, 1773
Tru9I	TTAA	3 cut(s)	1314, 1680, 1773
TscAI	CASTG	5 cut(s)	202, 1183, 1219, 1255, 1612
TseFI	GTSAC	4 cut(s)	559, 648, 1294, 1943
TseI	GCWGC	8 cut(s)	5, 8, 11, 728, 773, 833, 1598, 1739
Tsp45I	GTSAC	4 cut(s)	559, 648, 1294, 1943
TspDTI	ATGAA	4 cut(s)	95, 330, 1272, 1914
TspGWI	ACGGA	1 cut(s)	754
TspRI	CASTG	5 cut(s)	202, 1183, 1219, 1255, 1612
Van91I	CCANNNNNTGG	3 cut(s)	491, 1115, 1178
VpaK11BI	GGWCC	2 cut(s)	951, 1217
XapI	RAATTY	4 cut(s)	605, 705, 846, 1208
XmaJI	CCTAGG	1 cut(s)	1691
XmiI	GTMKAC	2 cut(s)	294, 1105
XmnI	GAANNNNTTC	2 cut(s)	1521, 1787
XspI	CTAG	6 cut(s)	236, 564, 1565, 1602, 1673, 1692
ZraI	GACGTC	2 cut(s)	280, 292

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.