Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0001492

Physical Location & Seq

Genomic Coordinates Forward (+)

18974695 .. 18981851

Gene Structure 7157 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom11g16990.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2034 bp

ATGGAACTGGATAAACCCCTCACCCGCCAAACCCCGAAAACTCACACACAAAAAATGGCAGCTCCACTGGAGCTCTTGTGCTACAGAGGAACCACCAGTTCTTCTCCCTCTCTCTCCAAAACTCTCTCCCGCCTCTCTTCCCCTTTCGCAATCCCCAAATCTCTCTCTCCGATTCTCCGCACTCATTGCCCTTCCCTCCACGCGTCTCTTCACTCCCTTCCTCGCTTCGTTTCCGGCCACTCCGCCAATGAATTCAATATATCCTCCGTAGCAGATGACCAACTACAAGAAGAAGACGACGGAGAAGAAGAGGGGGAGCTCGTGGATGAGTCCGACGGCGGCGGCGATTTATTGACGGTCGACGTCGATGACCTCGAAGAAGACGCTCGTTATGTAGTTGAAGAGTTCTCTTCCTCTTTGTCCACCCAACTCAGAATCGATGACAATGATGACCAAGAAAAAGTTAGTCGAAAGCAAAGGAGGCTGACAAGTACCGTTAAAACTATCCCTGACCATCTTCTACCAAGGGTTGCAATTGTTGGAAGGCCGAATGTTGGTAAATCAGCATTATTTAATCGTCTTGTCTCGGGTAACAAGGCAATTGTAGTGGATGAGCCTGGGGTTACTAGGGATCGCCTGTATGGTAGATCCTTTTGGGGTGACCATGAGTTTATGGTGGTGGATACCGGTGGTGTTCTTACAGTTTCAAAGTCCCAGGCAAATGTCATGGAAGAATTAGCTATTTCAACGACCATTGGTATGGATGGAATCCCACTTGCCTCTAGGGAGGCAGCTGTTGCTAGGATGCCCTCAATGATAGAGAAACAAGCTACTGCAGCTGTTGAAGAATCATCTGTCATTATATTCCTCGTTGATGGCCAGGCAGGTCTAACTGCAGCAGATGAGGAAATTTCAGATTGGCTACGTAAAAACTTCTCAGATAAGTACATCATTCTTGCAGTTAACAAGTGTGAATCTCCACGTAAAGGGATCATGCAAGCATCAGAATTTTGGTCATTGGGGTTTTCACCACTTCCTATATCTGCTATATCTGGAACTGGAACCGGAGAGCTTCTCGATCTTTTGTGTTCAGGGCTGAAAAAGAATGAGGACCCGGAGGAATTTGCTGAACAGGAAGACTATGTTCCTGCAATTGCAATTGTGGGCCGACCAAATGTTGGTAAGAGTAGCATTTTGAATGCATTGGTTGGAGAGGACAGGACAATTGTTAGCCCAGTCAGTGGAACGACCCGTGATGCTATTGATATGGAGTTTACTGGACCAGATGGACAGAAGTTCCGGCTAATTGATACTGCTGGAATCAGAAGAAGAGCAGTTGTCGCTTCATCAGGTAGCATGACGGAGGCTTTATCAGTAAATCGAGCATTTCGTGCCATTCGTCGTTCTGATGTTGTGGCACTTGTCATTGAGGCCCTGGCTTGTATCACAGAACAGGATTGCAAGATTGCTGAAAGGATAGAAAGAGAGGGCAAAGGTTGCCTGATTGTTGTAAACAAATGGGATACCATACCAAATAAAAACCAGCAAACTGCAACATATTATGAGGAGGATGTTAGGGAGAAGCTTCGTATTCTTGGTTGGGCACCTATTGTATATTCAACTGCAATAGCTGGTCAGAGTGTCGATAAGATTATCGATGCTGCTAGCACAGTTGAGAAAGAAAGATCAAGAAGGCTTAGTACTTCTGTAGTAAACCAAGTGGTCCAGGAAGCACTAGCTTTTAAATCACCACCGAGGACACGAGGTGGCAAAAGGGGCCGCATTTATTACTGCACTCAGGCAGCTATAAGGCCACCAACATTTGTCTTCTTTGTCAATGATGCAAAACTTTTCCCTGAGACATACCGGCGTTATATGGAGAAGCAACTGCGTTCAGATGCTGGGTTTTTGGGCACTCCAATTCGGCTTCTATGGTCTAACAGGAGGAAATCAGAAAAAGAGGAAGGCAGAGCTGCAACGAGAGCACAAGCAAATCTTGTGCCACGTGAGAGAAAATTGGAGTTGGCTACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

KH_dom-like MMR_HSR1

Protein Analysis

678

Amino Acids

74.58

Weight (kDa)

5.65

Isoelectric Point (pI)

47.36

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001492)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12080 AT3G12080
fragaria_vesca	FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400 FvH4_1g30400
malus_domestica	MD03G1176500.v1.1 MD11G1197100.v1.1
prunus_persica	Prupe.4G247300_v2.0.a1
pyrus_communis	pycom03g13380 pycom11g16990
rosa_chinensis	RchiOBHm_Chr3g0490621
rosa_laevigata	RLG00000022879
rosa_multiflora	Rmu_co8408199.1_g000001 Rmu_sc0003456.1_g000004 Rmu_sc0007326.1_g000005
rosa_roxburghii	Rroxscaffold_6G00393360
rosa_rugosa	Rorug03G0244800 Rorug04G0071000
rosa_samantha	Rh3AG294100 Rh3BG330300 Rh3DG327200
rosa_wichuraiana	Rw3G026010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	366
Acc36I	ACCTGC	1 cut(s)	875
AccB1I	GGYRCC	1 cut(s)	1603
AccB7I	CCANNNNNTGG	2 cut(s)	1178, 1241
AccI	GTMKAC	1 cut(s)	360
AccII	CGCG	1 cut(s)	203
AciI	CCGC	7 cut(s)	25, 130, 178, 243, 339, 342, 1780
AclWI	GGATC	3 cut(s)	639, 642, 998
AcoI	YGGCCR	2 cut(s)	235, 877
AcsI	RAATTY	4 cut(s)	251, 909, 1007, 1121
AcvI	CACGTG	1 cut(s)	2006
AcyI	GRCGYC	1 cut(s)	363
AdeI	CACNNNGTG	1 cut(s)	1766
AfaI	GTAC	3 cut(s)	493, 947, 1702
AfiI	CCNNNNNNNGG	4 cut(s)	554, 986, 1178, 1241
AflIII	ACRYGT	1 cut(s)	201
AgeI	ACCGGT	1 cut(s)	686
AgsI	TTSAA	7 cut(s)	256, 401, 708, 747, 845, 1198, 1620
AjnI	CCWGG	5 cut(s)	616, 714, 879, 1434, 1725
Alw21I	GWGCWC	3 cut(s)	75, 321, 1987
Alw26I	GTCTC	3 cut(s)	210, 589, 1853
AlwI	GGATC	3 cut(s)	639, 642, 998
AlwNI	CAGNNNCTG	1 cut(s)	1901
Ama87I	CYCGRG	1 cut(s)	586
AoxI	GGCC	7 cut(s)	235, 545, 877, 1165, 1431, 1777, 1811
ApeKI	GCWGC	7 cut(s)	59, 791, 836, 896, 1661, 1802, 1973
ApoI	RAATTY	4 cut(s)	251, 909, 1007, 1121
AsiGI	ACCGGT	1 cut(s)	686
AspS9I	GGNCC	6 cut(s)	1111, 1165, 1280, 1432, 1723, 1777
AsuC2I	CCSGG	1 cut(s)	1115
AsuHPI	GGTGA	4 cut(s)	13, 671, 1020, 1740
AsuNHI	GCTAGC	1 cut(s)	1664
AvaI	CYCGRG	1 cut(s)	586
AvaII	GGWCC	3 cut(s)	1111, 1280, 1723
BaeGI	GKGCMC	2 cut(s)	1606, 1916
BalI	TGGCCA	1 cut(s)	879
BanI	GGYRCC	1 cut(s)	1603
BanII	GRGCYC	2 cut(s)	75, 321
BarI	GAAGNNNNNNTAC	2 cut(s)	1684, 1716
BauI	CACGAG	2 cut(s)	320, 1761
BbrPI	CACGTG	1 cut(s)	2006
BbsI	GAAGAC	4 cut(s)	300, 387, 1143, 1819
Bbv12I	GWGCWC	3 cut(s)	75, 321, 1987
BbvI	GCAGC	7 cut(s)	71, 803, 848, 908, 1648, 1814, 1960
BccI	CCATC	4 cut(s)	522, 758, 869, 1280
BceAI	ACGGC	1 cut(s)	352
BciT130I	CCWGG	5 cut(s)	618, 716, 881, 1436, 1727
BciVI	GTATCC	2 cut(s)	676, 1516
BcnI	CCSGG	1 cut(s)	1115
BcoDI	GTCTC	3 cut(s)	210, 589, 1853
BfaI	CTAG	5 cut(s)	627, 783, 801, 1665, 1736
BfmI	CTRYAG	4 cut(s)	82, 834, 894, 1707
BfuAI	ACCTGC	1 cut(s)	875
BfuI	GTATCC	2 cut(s)	676, 1516
BmcAI	AGTACT	1 cut(s)	1702
Bme1390I	CCNGG	6 cut(s)	618, 716, 881, 1115, 1436, 1727
Bme18I	GGWCC	3 cut(s)	1111, 1280, 1723
BmeT110I	CYCGRG	1 cut(s)	586
BmgT120I	GGNCC	6 cut(s)	1111, 1165, 1280, 1432, 1723, 1777
BmiI	GGNNCC	5 cut(s)	91, 1063, 1113, 1605, 1778
BmrFI	CCNGG	6 cut(s)	618, 716, 881, 1115, 1436, 1727
BmrI	ACTGGG	1 cut(s)	1229
BmsI	GCATC	6 cut(s)	795, 1010, 1246, 1648, 1831, 1888
BmtI	GCTAGC	1 cut(s)	1668
BmuI	ACTGGG	1 cut(s)	1229
BpiI	GAAGAC	4 cut(s)	300, 387, 1143, 1819
BplI	GAGNNNNNCTC	2 cut(s)	1059, 1091
BpmI	CTGGAG	1 cut(s)	89
BpuMI	CCSGG	1 cut(s)	1115
Bsa29I	ATCGAT	2 cut(s)	438, 1656
BsaAI	YACGTR	3 cut(s)	926, 983, 2006
BsaHI	GRCGYC	1 cut(s)	363
BsaJI	CCNNGG	5 cut(s)	524, 617, 714, 1434, 1754
BsaWI	WCCGGW	2 cut(s)	686, 1064
BsaXI	ACNNNNNCTCC	2 cut(s)	62, 92
Bsc4I	CCNNNNNNNGG	4 cut(s)	554, 986, 1178, 1241
Bse118I	RCCGGY	2 cut(s)	686, 1866
Bse1I	ACTGG	6 cut(s)	12, 72, 96, 1063, 1235, 1282
Bse3DI	GCAATG	1 cut(s)	184
BseBI	CCWGG	5 cut(s)	618, 716, 881, 1436, 1727
BseCI	ATCGAT	2 cut(s)	438, 1656
BseDI	CCNNGG	5 cut(s)	524, 617, 714, 1434, 1754
BseGI	GGATG	5 cut(s)	331, 616, 769, 810, 1576
BseLI	CCNNNNNNNGG	4 cut(s)	554, 986, 1178, 1241
BseMI	GCAATG	1 cut(s)	184
BseMII	CTCAG	4 cut(s)	445, 951, 1811, 1848
BseNI	ACTGG	6 cut(s)	12, 72, 96, 1063, 1235, 1282
BseRI	GAGGAG	1 cut(s)	1580
BseSI	GKGCMC	2 cut(s)	1606, 1916
BseXI	GCAGC	7 cut(s)	71, 803, 848, 908, 1648, 1814, 1960
BseYI	CCCAGC	1 cut(s)	1901
BsgI	GTGCAG	1 cut(s)	1777
Bsh1236I	CGCG	1 cut(s)	203
Bsh1285I	CGRYCG	1 cut(s)	360
BshFI	GGCC	7 cut(s)	237, 547, 879, 1167, 1433, 1779, 1813
BshNI	GGYRCC	1 cut(s)	1603
BshTI	ACCGGT	1 cut(s)	686
BshVI	ATCGAT	2 cut(s)	438, 1656
BsiEI	CGRYCG	1 cut(s)	360
BsiHKAI	GWGCWC	3 cut(s)	75, 321, 1987
BsiHKCI	CYCGRG	1 cut(s)	586
BsiSI	CCGG	6 cut(s)	234, 687, 1065, 1115, 1300, 1867
BslFI	GGGAC	1 cut(s)	697
BslI	CCNNNNNNNGG	4 cut(s)	554, 986, 1178, 1241
BsmAI	GTCTC	3 cut(s)	210, 589, 1853
BsmBI	CGTCTC	1 cut(s)	210
BsmFI	GGGAC	1 cut(s)	697
BsmI	GAATGC	1 cut(s)	1204
BsnI	GGCC	7 cut(s)	237, 547, 879, 1167, 1433, 1779, 1813
BsoBI	CYCGRG	1 cut(s)	586
Bsp1286I	GDGCHC	5 cut(s)	75, 321, 1606, 1916, 1987
Bsp143I	GATC	5 cut(s)	631, 647, 990, 1078, 1685
BspACI	CCGC	7 cut(s)	25, 130, 178, 243, 339, 342, 1780
BspANI	GGCC	7 cut(s)	237, 547, 879, 1167, 1433, 1779, 1813
BspCNI	CTCAG	4 cut(s)	444, 950, 1810, 1849
BspDI	ATCGAT	2 cut(s)	438, 1656
BspFNI	CGCG	1 cut(s)	203
BspLI	GGNNCC	5 cut(s)	91, 1063, 1113, 1605, 1778
BspMAI	CTGCAG	2 cut(s)	838, 898
BspMI	ACCTGC	1 cut(s)	875
BspOI	GCTAGC	1 cut(s)	1668
BspPI	GGATC	3 cut(s)	639, 642, 998
BspQI	GCTCTTC	1 cut(s)	1324
BspT107I	GGYRCC	1 cut(s)	1603
BsrDI	GCAATG	1 cut(s)	184
BsrFI	RCCGGY	2 cut(s)	686, 1866
BsrI	ACTGG	6 cut(s)	12, 72, 96, 1063, 1235, 1282
BssAI	RCCGGY	2 cut(s)	686, 1866
BssECI	CCNNGG	5 cut(s)	524, 617, 714, 1434, 1754
BssMI	GATC	5 cut(s)	631, 647, 990, 1078, 1685
BssNI	GRCGYC	1 cut(s)	363
BssSI	CACGAG	2 cut(s)	320, 1761
BssT1I	CCWWGG	1 cut(s)	524
Bst2BI	CACGAG	2 cut(s)	320, 1761
Bst2UI	CCWGG	5 cut(s)	618, 716, 881, 1436, 1727
Bst4CI	ACNGT	4 cut(s)	358, 496, 703, 1672
Bst6I	CTCTTC	6 cut(s)	142, 213, 303, 396, 415, 1324
BstACI	GRCGYC	1 cut(s)	363
BstAPI	GCANNNNNTGC	4 cut(s)	186, 797, 1391, 1497
BstBAI	YACGTR	3 cut(s)	926, 983, 2006
BstC8I	GCNNGC	2 cut(s)	999, 1666
BstDEI	CTNAG	5 cut(s)	431, 937, 1697, 1797, 1857
BstEII	GGTNACC	1 cut(s)	659
BstF5I	GGATG	5 cut(s)	331, 616, 769, 810, 1576
BstFNI	CGCG	1 cut(s)	203
BstKTI	GATC	5 cut(s)	634, 650, 993, 1081, 1688
BstMAI	GTCTC	3 cut(s)	210, 589, 1853
BstMBI	GATC	5 cut(s)	631, 647, 990, 1078, 1685
BstMCI	CGRYCG	1 cut(s)	360
BstMWI	GCNNNNNNNGC	9 cut(s)	186, 481, 797, 836, 1340, 1391, 1497, 1776, 1982
BstNI	CCWGG	5 cut(s)	618, 716, 881, 1436, 1727
BstPI	GGTNACC	1 cut(s)	659
BstSCI	CCNGG	6 cut(s)	616, 714, 879, 1113, 1434, 1725
BstSFI	CTRYAG	4 cut(s)	82, 834, 894, 1707
BstSLI	GKGCMC	2 cut(s)	1606, 1916
BstSNI	TACGTA	1 cut(s)	926
BstUI	CGCG	1 cut(s)	203
BstV1I	GCAGC	7 cut(s)	71, 803, 848, 908, 1648, 1814, 1960
BstV2I	GAAGAC	4 cut(s)	300, 387, 1143, 1819
BstX2I	RGATCY	1 cut(s)	647
BstXI	CCANNNNNNTGG	1 cut(s)	760
BstYI	RGATCY	1 cut(s)	647
Bsu15I	ATCGAT	2 cut(s)	438, 1656
BsuI	GTATCC	2 cut(s)	676, 1516
BsuRI	GGCC	7 cut(s)	237, 547, 879, 1167, 1433, 1779, 1813
BsuTUI	ATCGAT	2 cut(s)	438, 1656
BtsCI	GGATG	5 cut(s)	331, 616, 769, 810, 1576
BtsIMutI	CAGTG	2 cut(s)	65, 1246
BveI	ACCTGC	1 cut(s)	875
Cac8I	GCNNGC	2 cut(s)	999, 1666
CaiI	CAGNNNCTG	1 cut(s)	1901
Cfr10I	RCCGGY	2 cut(s)	686, 1866
Cfr13I	GGNCC	6 cut(s)	1111, 1165, 1280, 1432, 1723, 1777
ClaI	ATCGAT	2 cut(s)	438, 1656
CseI	GACGC	2 cut(s)	192, 392
Csp6I	GTAC	3 cut(s)	492, 946, 1701
CspAI	ACCGGT	1 cut(s)	686
CspCI	CAANNNNNGTGG	2 cut(s)	588, 623
CviAII	CATG	4 cut(s)	665, 727, 994, 1357
CviQI	GTAC	3 cut(s)	492, 946, 1701
DdeI	CTNAG	5 cut(s)	431, 937, 1697, 1797, 1857
DpnI	GATC	5 cut(s)	633, 649, 992, 1080, 1687
DpnII	GATC	5 cut(s)	631, 647, 990, 1078, 1685
DraI	TTTAAA	1 cut(s)	1744
DraIII	CACNNNGTG	1 cut(s)	1766
EaeI	YGGCCR	2 cut(s)	235, 877
Eam1104I	CTCTTC	6 cut(s)	142, 213, 303, 396, 415, 1324
EarI	CTCTTC	6 cut(s)	142, 213, 303, 396, 415, 1324
EciI	GGCGGA	1 cut(s)	232
Ecl136II	GAGCTC	2 cut(s)	73, 319
Eco105I	TACGTA	1 cut(s)	926
Eco130I	CCWWGG	1 cut(s)	524
Eco24I	GRGCYC	2 cut(s)	75, 321
Eco47I	GGWCC	3 cut(s)	1111, 1280, 1723
Eco53kI	GAGCTC	2 cut(s)	73, 319
Eco72I	CACGTG	1 cut(s)	2006
Eco88I	CYCGRG	1 cut(s)	586
Eco91I	GGTNACC	1 cut(s)	659
EcoICRI	GAGCTC	2 cut(s)	73, 319
EcoO109I	RGGNCCY	2 cut(s)	1111, 1432
EcoO65I	GGTNACC	1 cut(s)	659
EcoRI	GAATTC	1 cut(s)	251
EcoRII	CCWGG	5 cut(s)	616, 714, 879, 1434, 1725
EcoT14I	CCWWGG	1 cut(s)	524
EcoT22I	ATGCAT	1 cut(s)	1204
EcoT38I	GRGCYC	2 cut(s)	75, 321
ErhI	CCWWGG	1 cut(s)	524
Esp3I	CGTCTC	1 cut(s)	210
FaeI	CATG	4 cut(s)	668, 730, 997, 1360
FalI	AAGNNNNNCTT	2 cut(s)	1980, 2012
FaqI	GGGAC	1 cut(s)	697
FatI	CATG	4 cut(s)	664, 726, 993, 1356
FauI	CCCGC	2 cut(s)	32, 137
FblI	GTMKAC	1 cut(s)	360
FokI	GGATG	5 cut(s)	338, 623, 776, 817, 1583
FriOI	GRGCYC	2 cut(s)	75, 321
FspBI	CTAG	5 cut(s)	627, 783, 801, 1665, 1736
GsaI	CCCAGC	1 cut(s)	1905
GsuI	CTGGAG	1 cut(s)	89
HaeIII	GGCC	7 cut(s)	237, 547, 879, 1167, 1433, 1779, 1813
HapII	CCGG	6 cut(s)	234, 687, 1065, 1115, 1300, 1867
HgaI	GACGC	2 cut(s)	192, 392
Hin1I	GRCGYC	1 cut(s)	363
Hin1II	CATG	4 cut(s)	668, 730, 997, 1360
HincII	GTYRAC	2 cut(s)	361, 964
HindII	GTYRAC	2 cut(s)	361, 964
HindIII	AAGCTT	1 cut(s)	1583
HinfI	GANTC	7 cut(s)	172, 329, 435, 768, 848, 974, 1320
HpaI	GTTAAC	1 cut(s)	964
HpaII	CCGG	6 cut(s)	234, 687, 1065, 1115, 1300, 1867
HphI	GGTGA	4 cut(s)	13, 671, 1020, 1740
Hpy166II	GTNNAC	6 cut(s)	361, 423, 964, 1275, 1513, 1714
Hpy188III	TCNNGA	3 cut(s)	1053, 1076, 1689
Hpy8I	GTNNAC	6 cut(s)	361, 423, 964, 1275, 1513, 1714
Hpy99I	CGWCG	5 cut(s)	302, 338, 365, 368, 1404
HpyAV	CCTTC	5 cut(s)	201, 227, 537, 1686, 1958
HpyCH4III	ACNGT	4 cut(s)	358, 496, 703, 1672
HpyCH4IV	ACGT	4 cut(s)	363, 925, 982, 2005
HpyF10VI	GCNNNNNNNGC	9 cut(s)	186, 481, 797, 836, 1340, 1391, 1497, 1776, 1982
HpyF3I	CTNAG	5 cut(s)	431, 937, 1697, 1797, 1857
HpySE526I	ACGT	4 cut(s)	363, 925, 982, 2005
Hsp92I	GRCGYC	1 cut(s)	363
Hsp92II	CATG	4 cut(s)	668, 730, 997, 1360
KspAI	GTTAAC	1 cut(s)	964
Kzo9I	GATC	5 cut(s)	631, 647, 990, 1078, 1685
LguI	GCTCTTC	1 cut(s)	1324
LmnI	GCTCC	3 cut(s)	67, 70, 316
Lsp1109I	GCAGC	7 cut(s)	71, 803, 848, 908, 1648, 1814, 1960
LweI	GCATC	6 cut(s)	795, 1010, 1246, 1648, 1831, 1888
MaeI	CTAG	5 cut(s)	627, 783, 801, 1665, 1736
MaeII	ACGT	4 cut(s)	363, 925, 982, 2005
MaeIII	GTNAC	3 cut(s)	590, 622, 659
MalI	GATC	5 cut(s)	633, 649, 992, 1080, 1687
MboI	GATC	5 cut(s)	631, 647, 990, 1078, 1685
MfeI	CAATTG	5 cut(s)	534, 600, 1152, 1158, 1224
MflI	RGATCY	1 cut(s)	647
MhlI	GDGCHC	5 cut(s)	75, 321, 1606, 1916, 1987
MlsI	TGGCCA	1 cut(s)	879
MluI	ACGCGT	1 cut(s)	201
MluNI	TGGCCA	1 cut(s)	879
MlyI	GAGTC	1 cut(s)	338
MmeI	TCCRAC	3 cut(s)	357, 520, 1189
Mox20I	TGGCCA	1 cut(s)	879
Mph1103I	ATGCAT	1 cut(s)	1204
MscI	TGGCCA	1 cut(s)	879
MseI	TTAA	4 cut(s)	498, 573, 963, 1743
MslI	CAYNNNNRTG	1 cut(s)	758
Msp20I	TGGCCA	1 cut(s)	879
MspA1I	CMGCKG	2 cut(s)	794, 839
MspI	CCGG	6 cut(s)	234, 687, 1065, 1115, 1300, 1867
MspR9I	CCNGG	6 cut(s)	618, 716, 881, 1115, 1436, 1727
MunI	CAATTG	5 cut(s)	534, 600, 1152, 1158, 1224
Mva1269I	GAATGC	1 cut(s)	1204
MvaI	CCWGG	5 cut(s)	618, 716, 881, 1436, 1727
MvnI	CGCG	1 cut(s)	203
MwoI	GCNNNNNNNGC	9 cut(s)	186, 481, 797, 836, 1340, 1391, 1497, 1776, 1982
NciI	CCSGG	1 cut(s)	1115
NdeII	GATC	5 cut(s)	631, 647, 990, 1078, 1685
NheI	GCTAGC	1 cut(s)	1664
NlaIII	CATG	4 cut(s)	668, 730, 997, 1360
NlaIV	GGNNCC	5 cut(s)	91, 1063, 1113, 1605, 1778
NmuCI	GTSAC	1 cut(s)	659
NsiI	ATGCAT	1 cut(s)	1204
PciSI	GCTCTTC	1 cut(s)	1324
PcsI	WCGNNNNNNNCGW	4 cut(s)	342, 372, 1387, 1396
PctI	GAATGC	1 cut(s)	1204
PfeI	GAWTC	6 cut(s)	172, 435, 768, 848, 974, 1320
PflMI	CCANNNNNTGG	2 cut(s)	1178, 1241
PfoI	TCCNGGA	1 cut(s)	1725
PinAI	ACCGGT	1 cut(s)	686
PleI	GAGTC	1 cut(s)	337
PmaCI	CACGTG	1 cut(s)	2006
PmlI	CACGTG	1 cut(s)	2006
PpsI	GAGTC	1 cut(s)	337
Ppu21I	YACGTR	3 cut(s)	926, 983, 2006
PpuMI	RGGWCCY	1 cut(s)	1111
Psp124BI	GAGCTC	2 cut(s)	75, 321
Psp5II	RGGWCCY	1 cut(s)	1111
Psp6I	CCWGG	5 cut(s)	616, 714, 879, 1434, 1725
PspCI	CACGTG	1 cut(s)	2006
PspEI	GGTNACC	1 cut(s)	659
PspFI	CCCAGC	1 cut(s)	1901
PspGI	CCWGG	5 cut(s)	616, 714, 879, 1434, 1725
PspN4I	GGNNCC	5 cut(s)	91, 1063, 1113, 1605, 1778
PspPI	GGNCC	6 cut(s)	1111, 1165, 1280, 1432, 1723, 1777
PspPPI	RGGWCCY	1 cut(s)	1111
PstI	CTGCAG	2 cut(s)	838, 898
PstNI	CAGNNNCTG	1 cut(s)	1901
PsuI	RGATCY	1 cut(s)	647
PvuII	CAGCTG	2 cut(s)	794, 839
RsaI	GTAC	3 cut(s)	493, 947, 1702
RsaNI	GTAC	3 cut(s)	492, 946, 1701
RseI	CAYNNNNRTG	1 cut(s)	758
SacI	GAGCTC	2 cut(s)	75, 321
SalI	GTCGAC	1 cut(s)	359
SapI	GCTCTTC	1 cut(s)	1324
SaqAI	TTAA	4 cut(s)	498, 573, 963, 1743
Sau3AI	GATC	5 cut(s)	631, 647, 990, 1078, 1685
Sau96I	GGNCC	6 cut(s)	1111, 1165, 1280, 1432, 1723, 1777
ScaI	AGTACT	1 cut(s)	1702
SchI	GAGTC	1 cut(s)	338
ScrFI	CCNGG	6 cut(s)	618, 716, 881, 1115, 1436, 1727
SduI	GDGCHC	5 cut(s)	75, 321, 1606, 1916, 1987
SfaNI	GCATC	6 cut(s)	795, 1010, 1246, 1648, 1831, 1888
SfcI	CTRYAG	4 cut(s)	82, 834, 894, 1707
SinI	GGWCC	3 cut(s)	1111, 1280, 1723
SmiMI	CAYNNNNRTG	1 cut(s)	758
SnaBI	TACGTA	1 cut(s)	926
SsiI	CCGC	7 cut(s)	25, 130, 178, 243, 339, 342, 1780
SspMI	CTAG	5 cut(s)	627, 783, 801, 1665, 1736
SstI	GAGCTC	2 cut(s)	75, 321
StyD4I	CCNGG	6 cut(s)	616, 714, 879, 1113, 1434, 1725
StyI	CCWWGG	1 cut(s)	524
TaaI	ACNGT	4 cut(s)	358, 496, 703, 1672
TaiI	ACGT	4 cut(s)	366, 928, 985, 2008
TaqI	TCGA	9 cut(s)	360, 366, 375, 438, 469, 1077, 1381, 1644, 1656
TatI	WGTACW	2 cut(s)	945, 1700
TauI	GCSGC	3 cut(s)	342, 345, 1782
TfiI	GAWTC	6 cut(s)	172, 435, 768, 848, 974, 1320
Tru1I	TTAA	4 cut(s)	498, 573, 963, 1743
Tru9I	TTAA	4 cut(s)	498, 573, 963, 1743
TscAI	CASTG	2 cut(s)	72, 1246
TseFI	GTSAC	1 cut(s)	659
TseI	GCWGC	7 cut(s)	59, 791, 836, 896, 1661, 1802, 1973
Tsp45I	GTSAC	1 cut(s)	659
TspDTI	ATGAA	2 cut(s)	264, 1335
TspGWI	ACGGA	3 cut(s)	256, 315, 1376
TspRI	CASTG	2 cut(s)	72, 1246
Van91I	CCANNNNNTGG	2 cut(s)	1178, 1241
VpaK11BI	GGWCC	3 cut(s)	1111, 1280, 1723
XapI	RAATTY	4 cut(s)	251, 909, 1007, 1121
XmiI	GTMKAC	1 cut(s)	360
XspI	CTAG	5 cut(s)	627, 783, 801, 1665, 1736
ZraI	GACGTC	1 cut(s)	364
ZrmI	AGTACT	1 cut(s)	1702
Zsp2I	ATGCAT	1 cut(s)	1204

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.