MD11G1197100.v1.1

KH-domain-like of EngA bacterial GTPase enzymes, C-terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0001492
Physical Location & Seq
Forward (+)
28316511 .. 28324004
7494 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1197100.v1.1.491

Sequence Viewer

Length: 1980 bp
ATGGCAGCTCCACTGGAGCTCATGTGCTACAGAGGAACTACCAGTTCTTCTCCCTCTCTCTCCAAAACTCTCTCTCTCCTCTCTTCCCCTTTCGCAATCCCCAAATCTCTCTCTCCGATTCTCCGCACTCATTCCCTTTCCCTCCACGCTTCTCTTCACTCCCTTCCTCGCTTCGTTTGCCGCCTCTCCGCCAATGAATTCAAAATATCCTCCATAGCAGATGACCAACTACAAGAAGAAGACGACGGAGAAGAAGAGGGGGAGCTCGTGGATGAGTCCGACGGCGGTGGCGATTTATTGACGGTCGACGTCGATGACCTCGAAGAAGACGCTCGTTATGTAGTTGAAGAGTTCTCTTCCTCTTTGTCCACCCAACTCAGAATCGATGACAATGATGACCAAGAAAAAGTTAGTCGAAAGCAAAGGAGGCTGACAAGTACAGTTAAAACTATCCCTGACCATCTTCTACAAAGGGTTGCAATTGTTGGAAGGCCGAATGTTGGTAAATCAGCATTATTTAATCGTCTTGTCTCGGGGAACAAGGCAATTGTAGTGGATGAGCCTGGGGTTACTAGGGATCGCCTGTATGGTAGATCCTTTTGGGGTGACCATGAGTTTATGGTGGTGGATACTGGTGGTGTTCTTACAGTTTCAAAGTCCCAGGCAAATGTCATGGAAGAATTAGCTATTTCAACGACCATTGGTATGGATGGAATCCCACTTGCCTCCCGGGAGGCAGCTGTTGCTAGGATGCCCTCAATGATAGAGAAACAAGCTACTGCAGCTGTTGAAGAATCATCTGTCATTATATTCCTCGTTGATGGCCAGGCAGGTCTAACTGCAGCAGATGAGGAAATTTCAGATTGGCTACGTAAAAACTTCTCAGATAAGTACATCATTCTTGCAGTTAACAAGTGTGAATCTCCACGTAAAGGGATCATACAAGCATCAGAATTTTGGTCATTGGGGTTTTCACCACTTCCTATATCTGCTATATCTGGAACTGGAACCGGAGAGCTTCTTGATCTTGTGTGTTCAGGGCTGAAAAAGAATGAGGACCCGGAGGAATTTGCTGAACAGGAAGACTATGTTCCTGCAATTGCAATTGTGGGCCGACCAAATGTTGGTAAGAGTAGCATTTTGAATGCCTTGGTTGGAGAGGACAGGACAATTGTTAGCCCAGTCAGTGGAACGACCCGTGATGCTATTGATATGGAGTTTACTGGACCTGATGGACAGAAGTTCCGGCTAATTGACACTGCTGGAATCAGAAGAAGAGCAGTCGTCGCTTCATCAGGTAGCATGACGGAGGCTTTATCGGTAAATCGAGCATTTCGTGCCATTCGTCGTTCCGATGTTGTGGCACTTGTCATTGAGGCCCTCGCTTGTATCACAGAACAGGATTGCAAGATTGCTGAACGGATAGAAAGAGAAGGCAAAGGTTGCCTGATTGTTGTAAACAAATGGGATACCATACCGAATAAAAACCAGCAAACTGCAACATATTATGAGGAGGATGTTAGGGAGAAGCTTCGTATTCTTGGTTGGGCACCTATTGTATATTCAACTGCAATAGCTGGTCAGAGTGTCGATAAGATTATCGATGCTGCTAGCACAGTCGAGAAAGAAAGATCAAGAAGGCTTAGTACTTCTGTAGTAAACCAAGTGGTCCAGGAAGCACTAGCTTTTAAATCACCACCGAGGACACGAGGTGGCAAAAGAGGCCGCATTTATTACTGCACTCAGGCAGCTATAAGGCCACCAACATTTGTCTTCTTTGTCAATGATGCAAAACTTTTCCCTGAGACATACCGGCGTTATATGGAGAAGCAACTGCGTTCAGATGCAGGGTTTTTGGGCACTCCAATTCGGCTTCTATGGTCTAACAGGAGGAAAACAGAAAAAGAGGAAGGCAGAGCTGCAACGAGAGCGCAAGCAAATCTTGTGCCACGTGAGAGAAAATTGGAGTTGGCTACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
KH_dom-like MMR_HSR1

Protein Analysis

660

Amino Acids

72.56

Weight (kDa)

5.46

Isoelectric Point (pI)

46.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MMR_HSR1 PF01926 158 - 305 1.9e-23 50S ribosome-binding GTPase
FeoB_N PF02421 158 - 220 2.2e-08 Ferrous iron transport protein B
MMR_HSR1 PF01926 367 - 488 8.5e-27 50S ribosome-binding GTPase
FeoB_N PF02421 367 - 535 3.1e-09 Ferrous iron transport protein B
KH_dom-like PF14714 547 - 627 9.9e-29 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 312
Acc36I ACCTGC 1 cut(s) 821
AccB1I GGYRCC 1 cut(s) 1549
AccB7I CCANNNNNTGG 2 cut(s) 1124, 1187
AccI GTMKAC 1 cut(s) 306
AciI CCGC 5 cut(s) 124, 181, 189, 285, 1726
AclWI GGATC 3 cut(s) 585, 588, 944
AcoI YGGCCR 1 cut(s) 823
AcsI RAATTY 4 cut(s) 197, 855, 953, 1067
AcvI CACGTG 1 cut(s) 1952
AcyI GRCGYC 1 cut(s) 309
AdeI CACNNNGTG 1 cut(s) 1712
AfaI GTAC 3 cut(s) 439, 893, 1648
AfiI CCNNNNNNNGG 4 cut(s) 500, 932, 1124, 1187
AgsI TTSAA 7 cut(s) 202, 347, 654, 693, 791, 1144, 1566
AjnI CCWGG 4 cut(s) 562, 660, 825, 1671
Alw21I GWGCWC 2 cut(s) 21, 267
Alw26I GTCTC 2 cut(s) 535, 1799
AlwI GGATC 3 cut(s) 585, 588, 944
Ama87I CYCGRG 2 cut(s) 532, 729
AoxI GGCC 6 cut(s) 491, 823, 1111, 1377, 1723, 1757
ApeKI GCWGC 7 cut(s) 5, 737, 782, 842, 1607, 1748, 1919
ApoI RAATTY 4 cut(s) 197, 855, 953, 1067
AspLEI GCGC 1 cut(s) 1933
AspS9I GGNCC 5 cut(s) 1057, 1111, 1226, 1378, 1669
AsuC2I CCSGG 3 cut(s) 730, 731, 1061
AsuHPI GGTGA 3 cut(s) 617, 966, 1686
AsuNHI GCTAGC 1 cut(s) 1610
AvaI CYCGRG 2 cut(s) 532, 729
AvaII GGWCC 3 cut(s) 1057, 1226, 1669
BaeGI GKGCMC 2 cut(s) 1552, 1862
BalI TGGCCA 1 cut(s) 825
BanI GGYRCC 1 cut(s) 1549
BanII GRGCYC 2 cut(s) 21, 267
BarI GAAGNNNNNNTAC 2 cut(s) 1630, 1662
BauI CACGAG 2 cut(s) 266, 1707
BbrPI CACGTG 1 cut(s) 1952
BbsI GAAGAC 4 cut(s) 246, 333, 1089, 1765
Bbv12I GWGCWC 2 cut(s) 21, 267
BbvI GCAGC 7 cut(s) 17, 749, 794, 854, 1594, 1760, 1906
BccI CCATC 4 cut(s) 468, 704, 815, 1226
BceAI ACGGC 1 cut(s) 298
BciT130I CCWGG 4 cut(s) 564, 662, 827, 1673
BciVI GTATCC 2 cut(s) 622, 1462
BcnI CCSGG 3 cut(s) 730, 731, 1061
BcoDI GTCTC 2 cut(s) 535, 1799
BfaI CTAG 4 cut(s) 573, 747, 1611, 1682
BfmI CTRYAG 4 cut(s) 28, 780, 840, 1653
BfuAI ACCTGC 1 cut(s) 821
BfuI GTATCC 2 cut(s) 622, 1462
BisI GCNGC 9 cut(s) 6, 181, 738, 783, 843, 1608, 1726, 1749, 1920
BlsI GCNGC 9 cut(s) 7, 182, 739, 784, 844, 1609, 1727, 1750, 1921
BmcAI AGTACT 1 cut(s) 1648
Bme1390I CCNGG 7 cut(s) 564, 662, 730, 731, 827, 1061, 1673
Bme18I GGWCC 3 cut(s) 1057, 1226, 1669
BmeT110I CYCGRG 2 cut(s) 532, 729
BmgT120I GGNCC 5 cut(s) 1057, 1111, 1226, 1378, 1669
BmiI GGNNCC 3 cut(s) 1009, 1059, 1551
BmrFI CCNGG 7 cut(s) 564, 662, 730, 731, 827, 1061, 1673
BmrI ACTGGG 1 cut(s) 1175
BmsI GCATC 6 cut(s) 741, 956, 1192, 1594, 1777, 1834
BmtI GCTAGC 1 cut(s) 1614
BmuI ACTGGG 1 cut(s) 1175
BpiI GAAGAC 4 cut(s) 246, 333, 1089, 1765
BpmI CTGGAG 1 cut(s) 35
BpuMI CCSGG 3 cut(s) 730, 731, 1061
Bsa29I ATCGAT 2 cut(s) 384, 1602
BsaAI YACGTR 3 cut(s) 872, 929, 1952
BsaHI GRCGYC 1 cut(s) 309
BsaJI CCNNGG 5 cut(s) 563, 660, 729, 1149, 1700
BsaWI WCCGGW 1 cut(s) 1010
BsaXI ACNNNNNCTCC 2 cut(s) 8, 38
Bsc4I CCNNNNNNNGG 4 cut(s) 500, 932, 1124, 1187
Bse118I RCCGGY 1 cut(s) 1812
Bse1I ACTGG 6 cut(s) 18, 42, 637, 1009, 1181, 1228
BseBI CCWGG 4 cut(s) 564, 662, 827, 1673
BseCI ATCGAT 2 cut(s) 384, 1602
BseDI CCNNGG 5 cut(s) 563, 660, 729, 1149, 1700
BseGI GGATG 5 cut(s) 277, 562, 715, 756, 1522
BseLI CCNNNNNNNGG 4 cut(s) 500, 932, 1124, 1187
BseMII CTCAG 4 cut(s) 391, 897, 1757, 1794
BseNI ACTGG 6 cut(s) 18, 42, 637, 1009, 1181, 1228
BseRI GAGGAG 2 cut(s) 68, 1526
BseSI GKGCMC 2 cut(s) 1552, 1862
BseXI GCAGC 7 cut(s) 17, 749, 794, 854, 1594, 1760, 1906
BsgI GTGCAG 1 cut(s) 1723
Bsh1285I CGRYCG 1 cut(s) 306
BshFI GGCC 6 cut(s) 493, 825, 1113, 1379, 1725, 1759
BshNI GGYRCC 1 cut(s) 1549
BshVI ATCGAT 2 cut(s) 384, 1602
BsiEI CGRYCG 1 cut(s) 306
BsiHKAI GWGCWC 2 cut(s) 21, 267
BsiHKCI CYCGRG 2 cut(s) 532, 729
BsiSI CCGG 5 cut(s) 730, 1011, 1061, 1246, 1813
BslFI GGGAC 1 cut(s) 643
BslI CCNNNNNNNGG 4 cut(s) 500, 932, 1124, 1187
BsmAI GTCTC 2 cut(s) 535, 1799
BsmFI GGGAC 1 cut(s) 643
BsmI GAATGC 1 cut(s) 1150
BsnI GGCC 6 cut(s) 493, 825, 1113, 1379, 1725, 1759
BsoBI CYCGRG 2 cut(s) 532, 729
Bsp1286I GDGCHC 4 cut(s) 21, 267, 1552, 1862
Bsp143I GATC 5 cut(s) 577, 593, 936, 1024, 1631
BspACI CCGC 5 cut(s) 124, 181, 189, 285, 1726
BspANI GGCC 6 cut(s) 493, 825, 1113, 1379, 1725, 1759
BspCNI CTCAG 4 cut(s) 390, 896, 1756, 1795
BspDI ATCGAT 2 cut(s) 384, 1602
BspLI GGNNCC 3 cut(s) 1009, 1059, 1551
BspMAI CTGCAG 2 cut(s) 784, 844
BspMI ACCTGC 1 cut(s) 821
BspOI GCTAGC 1 cut(s) 1614
BspPI GGATC 3 cut(s) 585, 588, 944
BspQI GCTCTTC 1 cut(s) 1270
BspT107I GGYRCC 1 cut(s) 1549
BsrFI RCCGGY 1 cut(s) 1812
BsrI ACTGG 6 cut(s) 18, 42, 637, 1009, 1181, 1228
BssAI RCCGGY 1 cut(s) 1812
BssECI CCNNGG 5 cut(s) 563, 660, 729, 1149, 1700
BssMI GATC 5 cut(s) 577, 593, 936, 1024, 1631
BssNI GRCGYC 1 cut(s) 309
BssSI CACGAG 2 cut(s) 266, 1707
BssT1I CCWWGG 1 cut(s) 1149
Bst2BI CACGAG 2 cut(s) 266, 1707
Bst2UI CCWGG 4 cut(s) 564, 662, 827, 1673
Bst4CI ACNGT 4 cut(s) 304, 442, 649, 1618
Bst6I CTCTTC 6 cut(s) 88, 159, 249, 342, 361, 1270
BstACI GRCGYC 1 cut(s) 309
BstAPI GCANNNNNTGC 3 cut(s) 743, 1337, 1443
BstBAI YACGTR 3 cut(s) 872, 929, 1952
BstC8I GCNNGC 2 cut(s) 1612, 1935
BstDEI CTNAG 5 cut(s) 377, 883, 1643, 1743, 1803
BstEII GGTNACC 1 cut(s) 605
BstF5I GGATG 5 cut(s) 277, 562, 715, 756, 1522
BstHHI GCGC 1 cut(s) 1933
BstKTI GATC 5 cut(s) 580, 596, 939, 1027, 1634
BstMAI GTCTC 2 cut(s) 535, 1799
BstMBI GATC 5 cut(s) 577, 593, 936, 1024, 1631
BstMCI CGRYCG 1 cut(s) 306
BstMWI GCNNNNNNNGC 9 cut(s) 177, 427, 743, 782, 1286, 1337, 1443, 1722, 1928
BstNI CCWGG 4 cut(s) 564, 662, 827, 1673
BstPI GGTNACC 1 cut(s) 605
BstSCI CCNGG 7 cut(s) 562, 660, 728, 729, 825, 1059, 1671
BstSFI CTRYAG 4 cut(s) 28, 780, 840, 1653
BstSLI GKGCMC 2 cut(s) 1552, 1862
BstSNI TACGTA 1 cut(s) 872
BstV1I GCAGC 7 cut(s) 17, 749, 794, 854, 1594, 1760, 1906
BstV2I GAAGAC 4 cut(s) 246, 333, 1089, 1765
BstX2I RGATCY 1 cut(s) 593
BstXI CCANNNNNNTGG 1 cut(s) 706
BstYI RGATCY 1 cut(s) 593
Bsu15I ATCGAT 2 cut(s) 384, 1602
BsuI GTATCC 2 cut(s) 622, 1462
BsuRI GGCC 6 cut(s) 493, 825, 1113, 1379, 1725, 1759
BsuTUI ATCGAT 2 cut(s) 384, 1602
BtsCI GGATG 5 cut(s) 277, 562, 715, 756, 1522
BtsI GCAGTG 1 cut(s) 1257
BtsIMutI CAGTG 3 cut(s) 11, 1192, 1257
BveI ACCTGC 1 cut(s) 821
Cac8I GCNNGC 2 cut(s) 1612, 1935
CfoI GCGC 1 cut(s) 1933
Cfr10I RCCGGY 1 cut(s) 1812
Cfr13I GGNCC 5 cut(s) 1057, 1111, 1226, 1378, 1669
Cfr9I CCCGGG 1 cut(s) 729
ClaI ATCGAT 2 cut(s) 384, 1602
CseI GACGC 1 cut(s) 338
Csp6I GTAC 3 cut(s) 438, 892, 1647
CspCI CAANNNNNGTGG 2 cut(s) 534, 569
CviAII CATG 4 cut(s) 22, 611, 673, 1303
CviQI GTAC 3 cut(s) 438, 892, 1647
DdeI CTNAG 5 cut(s) 377, 883, 1643, 1743, 1803
DpnI GATC 5 cut(s) 579, 595, 938, 1026, 1633
DpnII GATC 5 cut(s) 577, 593, 936, 1024, 1631
DraI TTTAAA 1 cut(s) 1690
DraIII CACNNNGTG 1 cut(s) 1712
EaeI YGGCCR 1 cut(s) 823
Eam1104I CTCTTC 6 cut(s) 88, 159, 249, 342, 361, 1270
EarI CTCTTC 6 cut(s) 88, 159, 249, 342, 361, 1270
EciI GGCGGA 1 cut(s) 178
Ecl136II GAGCTC 2 cut(s) 19, 265
Eco105I TACGTA 1 cut(s) 872
Eco130I CCWWGG 1 cut(s) 1149
Eco24I GRGCYC 2 cut(s) 21, 267
Eco47I GGWCC 3 cut(s) 1057, 1226, 1669
Eco53kI GAGCTC 2 cut(s) 19, 265
Eco72I CACGTG 1 cut(s) 1952
Eco88I CYCGRG 2 cut(s) 532, 729
Eco91I GGTNACC 1 cut(s) 605
EcoICRI GAGCTC 2 cut(s) 19, 265
EcoO109I RGGNCCY 2 cut(s) 1057, 1378
EcoO65I GGTNACC 1 cut(s) 605
EcoRI GAATTC 1 cut(s) 197
EcoRII CCWGG 4 cut(s) 562, 660, 825, 1671
EcoT14I CCWWGG 1 cut(s) 1149
EcoT38I GRGCYC 2 cut(s) 21, 267
ErhI CCWWGG 1 cut(s) 1149
FaeI CATG 4 cut(s) 25, 614, 676, 1306
FalI AAGNNNNNCTT 2 cut(s) 1926, 1958
FaqI GGGAC 1 cut(s) 643
FatI CATG 4 cut(s) 21, 610, 672, 1302
FblI GTMKAC 1 cut(s) 306
Fnu4HI GCNGC 9 cut(s) 6, 181, 738, 783, 843, 1608, 1726, 1749, 1920
FokI GGATG 5 cut(s) 284, 569, 722, 763, 1529
FriOI GRGCYC 2 cut(s) 21, 267
Fsp4HI GCNGC 9 cut(s) 6, 181, 738, 783, 843, 1608, 1726, 1749, 1920
FspBI CTAG 4 cut(s) 573, 747, 1611, 1682
GlaI GCGC 1 cut(s) 1932
GluI GCNGC 9 cut(s) 6, 181, 738, 783, 843, 1608, 1726, 1749, 1920
GsuI CTGGAG 1 cut(s) 35
HaeIII GGCC 6 cut(s) 493, 825, 1113, 1379, 1725, 1759
HapII CCGG 5 cut(s) 730, 1011, 1061, 1246, 1813
HgaI GACGC 1 cut(s) 338
HhaI GCGC 1 cut(s) 1933
Hin1I GRCGYC 1 cut(s) 309
Hin1II CATG 4 cut(s) 25, 614, 676, 1306
Hin6I GCGC 1 cut(s) 1931
HinP1I GCGC 1 cut(s) 1931
HincII GTYRAC 2 cut(s) 307, 910
HindII GTYRAC 2 cut(s) 307, 910
HindIII AAGCTT 1 cut(s) 1529
HinfI GANTC 7 cut(s) 118, 275, 381, 714, 794, 920, 1266
HpaI GTTAAC 1 cut(s) 910
HpaII CCGG 5 cut(s) 730, 1011, 1061, 1246, 1813
HphI GGTGA 3 cut(s) 617, 966, 1686
Hpy166II GTNNAC 6 cut(s) 307, 369, 910, 1221, 1459, 1660
Hpy188III TCNNGA 4 cut(s) 999, 1022, 1621, 1635
Hpy8I GTNNAC 6 cut(s) 307, 369, 910, 1221, 1459, 1660
Hpy99I CGWCG 6 cut(s) 248, 284, 311, 314, 1289, 1350
HpyAV CCTTC 5 cut(s) 173, 483, 1427, 1632, 1904
HpyCH4III ACNGT 4 cut(s) 304, 442, 649, 1618
HpyCH4IV ACGT 4 cut(s) 309, 871, 928, 1951
HpyF10VI GCNNNNNNNGC 9 cut(s) 177, 427, 743, 782, 1286, 1337, 1443, 1722, 1928
HpyF3I CTNAG 5 cut(s) 377, 883, 1643, 1743, 1803
HpySE526I ACGT 4 cut(s) 309, 871, 928, 1951
Hsp92I GRCGYC 1 cut(s) 309
Hsp92II CATG 4 cut(s) 25, 614, 676, 1306
HspAI GCGC 1 cut(s) 1931
KspAI GTTAAC 1 cut(s) 910
Kzo9I GATC 5 cut(s) 577, 593, 936, 1024, 1631
LguI GCTCTTC 1 cut(s) 1270
LmnI GCTCC 3 cut(s) 13, 16, 262
Lsp1109I GCAGC 7 cut(s) 17, 749, 794, 854, 1594, 1760, 1906
LweI GCATC 6 cut(s) 741, 956, 1192, 1594, 1777, 1834
MaeI CTAG 4 cut(s) 573, 747, 1611, 1682
MaeII ACGT 4 cut(s) 309, 871, 928, 1951
MaeIII GTNAC 2 cut(s) 568, 605
MalI GATC 5 cut(s) 579, 595, 938, 1026, 1633
MboI GATC 5 cut(s) 577, 593, 936, 1024, 1631
MfeI CAATTG 5 cut(s) 480, 546, 1098, 1104, 1170
MflI RGATCY 1 cut(s) 593
MhlI GDGCHC 4 cut(s) 21, 267, 1552, 1862
MlsI TGGCCA 1 cut(s) 825
MluNI TGGCCA 1 cut(s) 825
MlyI GAGTC 1 cut(s) 284
MmeI TCCRAC 3 cut(s) 303, 466, 1135
Mox20I TGGCCA 1 cut(s) 825
MscI TGGCCA 1 cut(s) 825
MseI TTAA 4 cut(s) 444, 519, 909, 1689
MslI CAYNNNNRTG 1 cut(s) 704
Msp20I TGGCCA 1 cut(s) 825
MspA1I CMGCKG 2 cut(s) 740, 785
MspI CCGG 5 cut(s) 730, 1011, 1061, 1246, 1813
MspR9I CCNGG 7 cut(s) 564, 662, 730, 731, 827, 1061, 1673
MunI CAATTG 5 cut(s) 480, 546, 1098, 1104, 1170
Mva1269I GAATGC 1 cut(s) 1150
MvaI CCWGG 4 cut(s) 564, 662, 827, 1673
MwoI GCNNNNNNNGC 9 cut(s) 177, 427, 743, 782, 1286, 1337, 1443, 1722, 1928
NciI CCSGG 3 cut(s) 730, 731, 1061
NdeII GATC 5 cut(s) 577, 593, 936, 1024, 1631
NheI GCTAGC 1 cut(s) 1610
NlaIII CATG 4 cut(s) 25, 614, 676, 1306
NlaIV GGNNCC 3 cut(s) 1009, 1059, 1551
NmuCI GTSAC 1 cut(s) 605
PciSI GCTCTTC 1 cut(s) 1270
PcsI WCGNNNNNNNCGW 4 cut(s) 288, 318, 1333, 1342
PctI GAATGC 1 cut(s) 1150
PfeI GAWTC 6 cut(s) 118, 381, 714, 794, 920, 1266
PflMI CCANNNNNTGG 2 cut(s) 1124, 1187
PfoI TCCNGGA 1 cut(s) 1671
PkrI GCNGC 9 cut(s) 7, 182, 739, 784, 844, 1609, 1727, 1750, 1921
PleI GAGTC 1 cut(s) 283
PmaCI CACGTG 1 cut(s) 1952
PmlI CACGTG 1 cut(s) 1952
PpsI GAGTC 1 cut(s) 283
Ppu21I YACGTR 3 cut(s) 872, 929, 1952
PpuMI RGGWCCY 1 cut(s) 1057
Psp124BI GAGCTC 2 cut(s) 21, 267
Psp5II RGGWCCY 1 cut(s) 1057
Psp6I CCWGG 4 cut(s) 562, 660, 825, 1671
PspCI CACGTG 1 cut(s) 1952
PspEI GGTNACC 1 cut(s) 605
PspGI CCWGG 4 cut(s) 562, 660, 825, 1671
PspN4I GGNNCC 3 cut(s) 1009, 1059, 1551
PspPI GGNCC 5 cut(s) 1057, 1111, 1226, 1378, 1669
PspPPI RGGWCCY 1 cut(s) 1057
PstI CTGCAG 2 cut(s) 784, 844
PsuI RGATCY 1 cut(s) 593
PvuII CAGCTG 2 cut(s) 740, 785
RsaI GTAC 3 cut(s) 439, 893, 1648
RsaNI GTAC 3 cut(s) 438, 892, 1647
RseI CAYNNNNRTG 1 cut(s) 704
SacI GAGCTC 2 cut(s) 21, 267
SalI GTCGAC 1 cut(s) 305
SapI GCTCTTC 1 cut(s) 1270
SaqAI TTAA 4 cut(s) 444, 519, 909, 1689
SatI GCNGC 9 cut(s) 6, 181, 738, 783, 843, 1608, 1726, 1749, 1920
Sau3AI GATC 5 cut(s) 577, 593, 936, 1024, 1631
Sau96I GGNCC 5 cut(s) 1057, 1111, 1226, 1378, 1669
ScaI AGTACT 1 cut(s) 1648
SchI GAGTC 1 cut(s) 284
ScrFI CCNGG 7 cut(s) 564, 662, 730, 731, 827, 1061, 1673
SduI GDGCHC 4 cut(s) 21, 267, 1552, 1862
SfaNI GCATC 6 cut(s) 741, 956, 1192, 1594, 1777, 1834
SfcI CTRYAG 4 cut(s) 28, 780, 840, 1653
SinI GGWCC 3 cut(s) 1057, 1226, 1669
SmaI CCCGGG 1 cut(s) 731
SmiMI CAYNNNNRTG 1 cut(s) 704
SnaBI TACGTA 1 cut(s) 872
SsiI CCGC 5 cut(s) 124, 181, 189, 285, 1726
SspMI CTAG 4 cut(s) 573, 747, 1611, 1682
SstI GAGCTC 2 cut(s) 21, 267
StyD4I CCNGG 7 cut(s) 562, 660, 728, 729, 825, 1059, 1671
StyI CCWWGG 1 cut(s) 1149
TaaI ACNGT 4 cut(s) 304, 442, 649, 1618
TaiI ACGT 4 cut(s) 312, 874, 931, 1954
TaqI TCGA 9 cut(s) 306, 312, 321, 384, 415, 1327, 1590, 1602, 1620
TatI WGTACW 3 cut(s) 437, 891, 1646
TauI GCSGC 2 cut(s) 183, 1728
TfiI GAWTC 6 cut(s) 118, 381, 714, 794, 920, 1266
Tru1I TTAA 4 cut(s) 444, 519, 909, 1689
Tru9I TTAA 4 cut(s) 444, 519, 909, 1689
TscAI CASTG 3 cut(s) 18, 1192, 1264
TseFI GTSAC 1 cut(s) 605
TseI GCWGC 7 cut(s) 5, 737, 782, 842, 1607, 1748, 1919
Tsp45I GTSAC 1 cut(s) 605
TspDTI ATGAA 2 cut(s) 210, 1281
TspGWI ACGGA 3 cut(s) 261, 1322, 1435
TspMI CCCGGG 1 cut(s) 729
TspRI CASTG 3 cut(s) 18, 1192, 1264
Van91I CCANNNNNTGG 2 cut(s) 1124, 1187
VpaK11BI GGWCC 3 cut(s) 1057, 1226, 1669
XapI RAATTY 4 cut(s) 197, 855, 953, 1067
XmaI CCCGGG 1 cut(s) 729
XmiI GTMKAC 1 cut(s) 306
XspI CTAG 4 cut(s) 573, 747, 1611, 1682
ZraI GACGTC 1 cut(s) 310
ZrmI AGTACT 1 cut(s) 1648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.