FvH4_2g03080

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
Physical Location & Seq
Forward (+)
2385115 .. 2409354
24240 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g03080.t1

Sequence Viewer

Length: 7380 bp
ATGGCCGTCTCGGCGCAGTCCCTGAGGTTCGGCGGCGGCGGCGGCAGCTTCGACGCCCTCAATCGTATCCTCGCCGACCTCTGCACGCGTGGCAACCCCAAGGAGGGGGCTTCATTGGCTTTGAAGAAGCATCTAGAAGAACAAGCCCGTGACTTAGGTGGAGAAGCATTTTCTCGTTTCATGGATCAGTTGTACGATCGGATTTCTGCTCTTTTGGATAGCAATGATGTTGCAGAAAATTTGGGAGCTCTAAGAGCTATTGATGAGTTGATAGATGTGGCACTTGGAGAAAATGCATCAAAGGTTTCAAAGTTTGCTAATTACATAAGGACTGCCTTTGAGCTAAAACGTGATCCTGATATTTTGGTCCTGGCTAGTAGAGTTTTGGGCCATCTAGCCAGGGCCGGGGGAGCAATGACTGCAGATGAAGTGGAACGCCAGATAAAAATTGCTCTGGAATGGTTACGTGGAGACAGAATTGAGTATCGACGTTTTGCTGCCGTTTTGATCTTGAAAGAAATGGCAGAAAATGCTTCCACAGTGTTCAATGTTCATGTACCTGAGTTTGTTGATGCCATCTGGGTTGCTTTGAGGGATCCAGTATTGCCTATCCGAGAGCGAGCGGTGGAAGCTTTGCGAGCTTGCCTTGGTGTTATTGAGAAACGTGAGACACGATGGCGTGTGCAATGGTATTATCGTATGTTTGAGGCTACACAGGATGGATTGGGTAAAAATGCTTCTGTTCACAGCATACATGGTTCTTTACTTGCAGTTGGAGAGCTTTTAAGGAATACAGGTGAGTTCATGATGTCAAGGTATAGGGAAGTTGCAGAAATTGTCCTTAGATATCTTGACCACAAGGATAGGCTAGTTCGCCTGAGCATAACTTCACTGCTACCTCGAATTGCTCATTTTCTGCGTGATCGATTTGTTACAAACTACTTAGAGACTTGTATGAATCACATCCTCGCTGTTTTACGACAATCAGCTGAACTGCGCTCCAGTGGTTTTATTGCACTTGGGGAGATGGCCGGTGCGTTGGACGGGGAACTTTTTTTCTACTTGGGGCAAATTACACCTCACTTACGTGAAGCAATTGCTCCACGTAGAGGGAGACCCTCACTTGAGGCTTTGGCTTGTGTTGGAAATATTGCAAAAGCGATGGGGCCTGCTATGGAACATGATGTTCGTGGTCTTTTGGATGTTATGTTCGCTGCTGGTCTTTCCTCTACGCTTGTTGAGGCCCTTGAAAAGATAACTACCAGTATACCATCTTTGCTGCCTACTATCCAAGATCGCTTGCTAGAATGCATTTCAGTGGTTCTTTCAAAATCCCAACACCCTCAGGGAAGGTCGGTTGTTGGAATGGGTAGGGGAAATTTGATGAATATCCCTCAGCACGTTTCAGACCTTGGTGGTTCAGCCCTTGTGCAGCTTGCTTTGCAGACTCTATCTCGTTTCAATTTTAAGGGTCACGACCTACTTGAATTTGCAAGAGAGTCAGTTGTTGTATATTTGGATGATGATGATGGAGCCATCCGAAAAGATGCTGCACTATGTTGTTGCAGATTGGTTGCAAATTCCTTTTCTGGTGTACAATATGCTTCTGGTAGATCAAACCGGGGAAAGAGACGGCGTCTTATTGAGGAGATTGTTGAAAAGCTTCTCACCGAGGCTGTTGCAGATGCTGATGTGATTGTTCGCCATTCAATATTTTCTTCTCTACATGGGAACAGAGGCTTTGATGATTTCCTGGCTCAGGCTGATAGTCTCAGTGCAGTGTTTGCTGCTTTAAATGATGAGGATTTTGATGTTCGTGAGTTTGCAATTTCTGTGGCTGGGAGGTTGTCAGAAAAAAATCCTGCTTACGTTCTTCCAGCTCTTCGCCGCCATCTCATACAGTTGTTGACCTACTTGGGTCTGAGTGCAGATAGCAAATGCAGGGAAGAAAGTGCGAAGTTACTGGGTTGTTTGATACGTAACTGTGAAAGACTAATACTTCCATACATTGCTCCTATACACAAGGCACTTGTGGCAAGGCTAATGGATGGCACTGGTGTTGGCACGAATAATGGCATCATTAGTGGAGTTCTTGTAACTGTTGGGGATCTTGCTAGAGTGGGTGGGTTTGCAATGAGAAAATATATACCTGAGCTTATGCCTTTGATTGTTGAGGCTTTATTGGATGGAGCGGCTGTCACAAAACGGGAAGTGGCTGTAGCTACTCTCGGTCAAGTTGTACAGAGCACTGGGTATGTCATAGCTCCATATAATGAATATCCACTCTTACTTGGCCTACTCTTGAAGTTGCTTAATGGTGAGTTGGCATGGTCTACAAGACGTGAAGTACTAAAGGTTCTTGGAATTATGGGTGCTCTAGATCCTCATGTGCATAAACGAAATCAGCAAAGTTTGCCTGGGTCACATGGAGAGGTTACTCGTAATGCCAGTGATTCTGGTCAACATATCCAATCTGTAGATGAACTGCCTATGGACTTGTGGCCATCATTTGCAACATCTGAAGATTATTATTCTACGGTTGCAATCAATTCTCTCATGCGAATACTTAGGGACCCTTCACTTGGTACTTACCACCTAAAGGTTGTCGGATCACTTATGTTCATATTCAAGTCAATGGGTATCGGTTGTGTTCCGTACTTACCAAAGGTTTTGCCTGACCTTTTCCATATAGTTCGCACATGTGATGATGCTTTGAAGGATTTTATAACATGGAAGCTTGGAACTCTAGTGTCCATTGTGCGTCAGCACATACGGAAATATCTGCATGATTTATTGATTCTAATTTCAGAACTATGGTCAACATTTAGTTTCCCAGCTGGTGGCCGTCCTCAACTTGGCTATCCGGTCCTTCATCTTGTGGAGCAGCTTTGTTTGGCCCTGAACGATGAGTTCAGGACATATCTTCATGATATTCTTCCATGCTGTATCCAAGTTCTAAGTGATGCAGAACGGTGTAACAACTACACTTACGTTCTTGACATCCTCCACACCCTTGAAGTGTTTGGTGGAACGTTGGATGAACATATGCATCTTCTTCTTCCCGCTCTAATTCGTTTGTTCAAAGTGGATGCTTCAGTGGAAATAAGACGTGCTGCTATAAAAACTCTGACCAAACTCATCCCTCGAGTGCAGGTTACTGGTCATATATCTTCTCTTGTGCATCACTTGAAGCTAGTCTTAGATGGGAAGAATGATGACCTCCGGAAGGACACAGTTGATGCGCTTTGTTGTCTAGCATATGCCCTTGGGGAGGATTTCACCATCTTCATTCCATCAATACACAAACTTATATTAAAACATCGCTTACGGCACAAGGAATTCGAGGAAATTGAAGCCCGTTTGCAGCGACGTGAACCTTTATGTGTTCCTCAAAGATTAAGTCGACGACTTCCAGAGGTTGTTGCTGACCGTTCAACTGATTTGGAGATTGACCCTTATGATGATGTGGCTGATGTGCAGAAAAAACTTCGAAGTCATCAGGTCAATGATGGTCGATTACGCACTGCTGGGGAGGCTTCTCAACGCAGTACCAAAGAAGATTGGGCAGAATGGATGAGACACTTTAGTATTGAACTTTTGAAGGAATCTCCTTCTCCTGCACTACGAACCTGTGCAAGGCTTGCACAGTTGCAGCCTTTTGTTGGGCGGGAGTTGTTTGCAGCTGGATTTGTTAGCTGTTGGTCACAGCTAAACGAGACTAGTCAGAAACAGTTAGTTCGGAGTTTGGAGATGGCATTTTCATCTCCAAATATTCCTCCTGAAATTTTGGCAACACTGCTAAATCTGGCAGAGTTCATGGAACATGATGAGAAACCTCTTCCTATAGACATTCGTCTACTTGGTGCTCTTGCAGAGAAGTGTCGTGCATTTGCAAAGGCCTTGCATTACAAAGAAATGGAATTCGAAGGAGCACGTTCCAAGAAGATGGATGCCAATCCTGTTGCTGTAGTTGAAGTACTTATACATATAAACAACCAGTTACAACAGCATGAGGCTGCGGTTGGAATATTGACCTATGCTCAACAAAATTTGGATGTTCAACTGAAAGAGTCATGGTACGAGAAGTTGCAGCGGTGGGATGATGCTCTCAAGGCCTACACTGCAAAAGCATCTCAAGCATCAAGTCAACATCTTGTCTTGGATGCTACTTTAGGCCGTATGCGATGCCTTGCTGCCTTGGCTAGATGGGAAGAGCTTAACAACCTGTTTAAGGAATATTGGACCCCAGCTGAGCCTGCTGCTCGACTGGAAATGGCCCCAATGGCTGCAAGTGCTGCTTGGAATATGGGAGAGTGGGATCAAATGGCCGAATATGTGTCTCGATTGGATGATGGTGATGAAACCAAACTTAGGGGCTTGGGGAACACTGCTGCTAGTGGGGATGGAAGCAGTAATGGCACATTCTTTAGAGCTGTTTTGTTAGTTCGAAGAGGAAAGTATGATGAAGCACGCGAGTATGTTGAGAGAGCTAGGAAATGCTTGGCAACAGAGCTTGCTGCTTTGGTTTTGGAGAGCTATGAACGTGCATATATCAATATGGTTCGTGTTCAGCAGCTGTCAGAACTTGAGGAGGTCATCGATTATTGCACACTTCCTCTTGGGAATCCTGTTGCTGAAGGACGACGGGCCCTTATTCGCAATATGTGGAATGAGCGGATACAAGGAGCAAAACGTAATGTTGAGGTATGGCAGGCACTTTTAGCAGTGAGAGCACTTGTTCTGCCTCCTTCTGAAGATGTTGATACTTGGCTAAAGTTTGCTACCCTCTGTCGGAAAAATGGGCGAATTAGTCAGGCCAGATCTACTTTAGTCAAACTCTTACAGTATGACCCTGAGACATCTCATGAAAGCTTGCGATACCATGGGCCTCCGCAAGTGATGCTTGCATATTTGAAATACCAATGGTCACTTGGAGAAGAAGTTAAACGCAAGGAAGCTTTTTCTAGGCTGCAGAATTTGGCAATGGAGCTCTCAACTTTACCTAGTATTGAATCAGTTACACCAACTGGCTTAATGAGCTGTAGTACTCCAAGTGTCCCACTTATTGCCCGTGTGTATCTCAAACTTGGAGCCTGGAATTGGGCTCTTTCTCCTGGATTGGATGATGATTCTGTACAAGAAATTCTTGTTGCCTTCCGAAATGCAACTCAATGTGCAAATAAATGGGCAAAGGCATGGCACACATGGGCATTGTTCAATACAGCTGTTATGTCACTTTATACTGTCAGAGGGTATGCAAGTGCTGCTTCCCAGTTTGTTGTTGCAGCCGTCACTGGATATTTTCACTCAATTGCTTGTTCAGCAAATACTAAAGGCGTTGATGATAGCTTACAGGATATTCTTCGTCTTCTTACATTGTGGTTCAACCACGGAGCTACTGCAGAAGTTCAAATGGCGCTACAAAAAGGGTTTGCACATGTTAATATTAATACATGGCTGGTGGTTTTACCCCAAATAATTGCCAGGATACATTCTAATAATCATGCTGTACGGGAACTCATACAGTCGCTCTTGGTGCGAATTGGACAAAGTCATCCACAGGCTCTTATGTACCCTCTCCTAGTAGCATGTAAATCAATAAGTCCTTTACGCAGAGCTGCCGCTGAAGAAGTGGTTGACAAAGTTCGACAGCATAGTGGTGTACTTGTGGATCAGGCACAACTAGTTTCAACGGAACTTATCCGGGTCGCGATCCTCTGGCATGAAACGTGGCATGAGGCTCTGGAAGAAGCTAGTCGTCTGTATTTTGGTGAACATAACATTGAGGGCATGCTAAAAGTATTGGAGCCATTGCATGTTTCCCTCGAGGAAGGGGCTATGAGGAATAATACTACAATAAAGGAGACAACATTCATTGAGGCCTATCGTCATGAATTGCTGGAGGCCTATGAATGTTGCATGAAATATAAGAGAACTGGAAAAGATGCTGAGCTTACACAGGCATGGGATCTTTACTATCATGTATTCAGACGAATAGATAAGCAGCTGCAAAGTCTTACTACTCTGGACTTGGAGTCTGTCTCGCCAGAGTTGTTAGAATGTCGTGATTTAGAGCTGGCTGTTCCTGGTACCTATCGAGCAGAATCTCCGGTGGTGACAATTGCATCATTTGCACGGCAGCTTGTTGTCATAACATCCAAACAGCGACCAAGGAAATTAACAATTCATGGGAGTGATGGTGAGGATTATGCCTTCTTGCTGAAGGGACATGAAGACTTGCGCCAAGATGAACGCGTCATGCAGCTTTTTGGTTTGGTGAACACGCTACTGGAGAATTCTAGAAAAACTCAAGAGAAGGATCTGTCCATTCAACGATATTCTGTCATTCCTTTATCACCAAACAGTGGACTGATTGGTTGGGTCCCAAATTGTGACACCCTTCACCATCTCATTAGGGAGTACAGGGATGCCAGAAAGATCACTCTTAATCAAGAACACAAATATATGCTCAGTTTTGCTCCGGATTATGATCATTTGCCGCTCATAGCTAAAGTGGAAGTATTTGAGTATGCCCTGCACAATACAGAGGGAAATGACCTTTCAAGGGTTCTTTGGCTTAAAAGTCGCACTTCAGAGGTATGGCTGGAGAGGAGGACAAACTACACGAGAAGTTTGGCGGTCATGAGCATGGTCGGTTACCTTCTTGGCCTTGGTGATCGTCATCCAAGCAATCTTATGCTGCACCGTTCTAGTGGGAAGATCTTGCACATCGACTTTGGGGATTGCTTTGAAGCATCTATGAACCGCGAAAAGTTTCCTGAGAAGGTCCCCTTTCGATTGACTAGAATGCTTGTGAAAGCAATGGAGGTTAGTGGTATAGAGGGCAACTTCCGTTCAACTTGTGAAAATGTCATGCAAGTTCTGCGAACACATAAAGATAGTGTTATGGCTATGATGGAGGCCTTTGTTCATGATCCTCTCATCAACTGGCGTCTCTTCAACTTCAATGAAGTTCCACAAGTGGCTACATTAGCAAATAGTCATGCTCCTCCTGTTGTGGAGGCCGAAGAACCAACTCCAGCTAGAGAGCTTCTCCAACCTCAACGTGGTGCTCGTGAAAGGGAACTTCTTCAGGCTGTTAATCAACTTGGTGATGCTAATGAGGTCTTGAATGAGCGCGCTGTTGTTGTAATGGCTCGGATGAGTAATAAGCTTACTGGGCGTGATTTTTCCACCAGTTCTTCCGTATCATCTAGTTCTATTCAGCATGTTGTAGACCACAGCACGCTGATTTCTGGAGATTCTCGAGAAGTTGATCATGGTTTATCTGTTAAGCTGCAAGTTCAAAAGTTGATTGGCCAGGCGACATCTCATGAAAATTTGTGCCAGAATTATGTCGGGTGGTGTCCTTTTTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0001067 GO:0001558 GO:0002682 GO:0002683 GO:0002697 GO:0002698 GO:0002831 GO:0002832 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003824 GO:0004672 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005844 GO:0006139 GO:0006259 GO:0006281 GO:0006351 GO:0006355 GO:0006464 GO:0006468 GO:0006629 GO:0006644 GO:0006650 GO:0006661 GO:0006725 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006974 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009059 GO:0009303 GO:0009605 GO:0009606 GO:0009607 GO:0009615 GO:0009628 GO:0009629 GO:0009630 GO:0009719 GO:0009725 GO:0009733 GO:0009743 GO:0009744 GO:0009745 GO:0009756 GO:0009790 GO:0009791 GO:0009793 GO:0009889 GO:0009891 GO:0009892 GO:0009893 GO:0009894 GO:0009895 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010115 GO:0010116 GO:0010154 GO:0010182 GO:0010243 GO:0010467 GO:0010468 GO:0010506 GO:0010507 GO:0010556 GO:0010557 GO:0010565 GO:0010604 GO:0010628 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0014070 GO:0016070 GO:0016072 GO:0016301 GO:0016303 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0018130 GO:0019216 GO:0019219 GO:0019222 GO:0019438 GO:0019538 GO:0019637 GO:0019747 GO:0022414 GO:0023051 GO:0023052 GO:0023056 GO:0030258 GO:0030307 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031330 GO:0031347 GO:0031348 GO:0032101 GO:0032102 GO:0032501 GO:0032502 GO:0032774 GO:0032991 GO:0033554 GO:0034285 GO:0034641 GO:0034645 GO:0034654 GO:0034660 GO:0035004 GO:0036092 GO:0036211 GO:0040008 GO:0040019 GO:0042221 GO:0042493 GO:0042802 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043455 GO:0043621 GO:0043900 GO:0043901 GO:0044087 GO:0044089 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044271 GO:0044424 GO:0044464 GO:0045017 GO:0045472 GO:0045828 GO:0045834 GO:0045893 GO:0045927 GO:0045935 GO:0045995 GO:0046474 GO:0046483 GO:0046486 GO:0046488 GO:0046677 GO:0046834 GO:0046854 GO:0046889 GO:0046890 GO:0048316 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050687 GO:0050688 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051128 GO:0051171 GO:0051173 GO:0051239 GO:0051240 GO:0051252 GO:0051254 GO:0051704 GO:0051707 GO:0051716 GO:0052742 GO:0060255 GO:0061458 GO:0062012 GO:0062013 GO:0065007 GO:0065008 GO:0070887 GO:0071310 GO:0071322 GO:0071324 GO:0071329 GO:0071704 GO:0080090 GO:0080134 GO:0090069 GO:0090070 GO:0090304 GO:0090407 GO:0097159 GO:0097305 GO:0097327 GO:0097659 GO:0098781 GO:0140096 GO:1900457 GO:1900459 GO:1901355 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901576 GO:1901654 GO:1901698 GO:1901700 GO:1901701 GO:1902659 GO:1902661 GO:1902680 GO:1902930 GO:1902932 GO:1903506 GO:1903508 GO:1990904 GO:2000026 GO:2000112 GO:2000232 GO:2000234 GO:2001141

Protein Analysis

2460

Amino Acids

276.28

Weight (kDa)

6.51

Isoelectric Point (pI)

43.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
mTOR_dom PF11865 753 - 921 1.7e-51 Serine/threonine-protein kinase mTOR domain
FAT PF02259 1426 - 1792 1.6e-95 FAT domain
HEAT_ATR PF23593 1807 - 1886 1e-10 Serine/threonine-protein kinase ATR-like, HEAT repeats
FRB_dom PF08771 1899 - 2001 2.8e-36 FKBP12-rapamycin binding domain
PI3_PI4_kinase PF00454 2070 - 2318 1.7e-82 Phosphatidylinositol 3- and 4-kinase
FATC PF02260 2429 - 2459 1.8e-14 FATC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2726
AbsI CCTCGAGG 1 cut(s) 5825
Acc36I ACCTGC 1 cut(s) 3142
Acc65I GGTACC 1 cut(s) 6089
AccB1I GGYRCC 1 cut(s) 6089
AccB7I CCANNNNNTGG 2 cut(s) 2840, 6365
AccBSI CCGCTC 5 cut(s) 623, 2192, 3065, 4675, 6502
AccI GTMKAC 5 cut(s) 1267, 2333, 3403, 3856, 7236
AccII CGCG 6 cut(s) 88, 4473, 5711, 6255, 6768, 7140
AccIII TCCGGA 2 cut(s) 3222, 6481
AclI AACGTT 1 cut(s) 3032
AcoI YGGCCR 6 cut(s) 3, 1029, 2501, 2842, 4326, 7318
AcuI CTGAAG 8 cut(s) 2541, 3078, 4656, 4773, 5646, 6242, 6576, 7076
AcyI GRCGYC 3 cut(s) 54, 1636, 6952
AflIII ACRYGT 4 cut(s) 86, 2699, 5437, 6253
AhdI GACNNNNNGTC 1 cut(s) 6034
AhlI ACTAGT 2 cut(s) 3719, 5683
AjiI CACGTC 3 cut(s) 2342, 3110, 3371
AjnI CCWGG 9 cut(s) 369, 398, 1752, 2416, 5093, 5113, 5483, 6085, 7320
AleI CACNNNNGTG 1 cut(s) 1086
AloI GAACNNNNNNTCC 2 cut(s) 1193, 1225
Alw21I GWGCWC 8 cut(s) 250, 2249, 2377, 3868, 3934, 4735, 4992, 7075
AlwNI CAGNNNCTG 3 cut(s) 22, 1688, 4576
Ama87I CYCGRG 3 cut(s) 3144, 5825, 7266
Aor13HI TCCGGA 2 cut(s) 3222, 6481
ApaI GGGCCC 1 cut(s) 4651
ArsI GACNNNNNNTTYG 2 cut(s) 3385, 3417
AseI ATTAAT 1 cut(s) 5448
Asp700I GAANNNNTTC 3 cut(s) 1662, 6774, 7089
Asp718I GGTACC 1 cut(s) 6089
AspLEI GCGC 7 cut(s) 16, 999, 3244, 5419, 6243, 7140, 7142
AsuC2I CCSGG 3 cut(s) 406, 1622, 5705
AsuII TTCGAA 3 cut(s) 3490, 3924, 4447
AvaI CYCGRG 3 cut(s) 3144, 5825, 7266
AvaII GGWCC 6 cut(s) 367, 2572, 2866, 4242, 6382, 6787
AxyI CCTNAGG 2 cut(s) 23, 1344
BaeGI GKGCMC 1 cut(s) 4651
BalI TGGCCA 2 cut(s) 2503, 7320
BamHI GGATCC 1 cut(s) 595
BanI GGYRCC 1 cut(s) 6089
BanII GRGCYC 4 cut(s) 250, 4651, 4992, 5107
BarI GAAGNNNNNNTAC 4 cut(s) 721, 753, 3966, 3998
BauI CACGAG 2 cut(s) 6625, 7074
BbsI GAAGAC 2 cut(s) 5360, 6240
Bbv12I GWGCWC 8 cut(s) 250, 2249, 2377, 3868, 3934, 4735, 4992, 7075
BbvCI CCTCAGC 1 cut(s) 1395
BceAI ACGGC 7 cut(s) 485, 1649, 2829, 3344, 4161, 5273, 6152
BcgI CGANNNNNNTGC 2 cut(s) 1661, 1695
BciT130I CCWGG 9 cut(s) 371, 400, 1754, 2418, 5095, 5115, 5485, 6087, 7322
BciVI GTATCC 4 cut(s) 77, 2957, 4671, 5481
BclI TGATCA 2 cut(s) 6490, 7276
BcnI CCSGG 3 cut(s) 406, 1622, 5705
BcuI ACTAGT 2 cut(s) 3719, 5683
BfmI CTRYAG 8 cut(s) 420, 2217, 2475, 3843, 3966, 4970, 5041, 5400
BfoI RGCGCY 1 cut(s) 5420
BfuAI ACCTGC 1 cut(s) 3142
BfuI GTATCC 4 cut(s) 77, 2957, 4671, 5481
BglI GCCNNNNNGGC 2 cut(s) 11, 4283
BglII AGATCT 2 cut(s) 4820, 6720
BlpI GCTNAGC 2 cut(s) 4251, 5949
BmcAI AGTACT 3 cut(s) 2349, 3978, 5047
Bme18I GGWCC 6 cut(s) 367, 2572, 2866, 4242, 6382, 6787
BmeRI GACNNNNNGTC 1 cut(s) 6034
BmeT110I CYCGRG 3 cut(s) 3144, 5825, 7266
BmgBI CACGTC 3 cut(s) 2342, 3110, 3371
BmrI ACTGGG 4 cut(s) 1973, 2259, 5266, 7188
BmuI ACTGGG 4 cut(s) 1973, 2259, 5266, 7188
BoxI GACNNNNGTC 1 cut(s) 3852
BpiI GAAGAC 2 cut(s) 5360, 6240
BplI GAGNNNNNCTC 4 cut(s) 6026, 6058, 7038, 7070
BpmI CTGGAG 6 cut(s) 985, 5921, 6311, 6626, 7023, 7278
Bpu10I CCTNAGC 4 cut(s) 878, 1395, 1758, 2151
Bpu1102I GCTNAGC 2 cut(s) 4251, 5949
Bpu14I TTCGAA 3 cut(s) 3490, 3924, 4447
BpuEI CTTGAG 5 cut(s) 1145, 4094, 4119, 4607, 6294
BpuMI CCSGG 3 cut(s) 406, 1622, 5705
Bsa29I ATCGAT 2 cut(s) 925, 4599
BsaAI YACGTR 4 cut(s) 467, 1088, 1106, 1979
BsaBI GATNNNNATC 4 cut(s) 1388, 3954, 6489, 6681
BsaHI GRCGYC 3 cut(s) 54, 1636, 6952
BsaI GGTCTC 1 cut(s) 1108
BsaWI WCCGGW 4 cut(s) 2863, 3222, 6109, 6481
BsaXI ACNNNNNCTCC 8 cut(s) 2079, 2109, 2181, 2211, 4926, 4956, 6184, 6214
Bse118I RCCGGY 1 cut(s) 1031
Bse21I CCTNAGG 2 cut(s) 23, 1344
Bse3DI GCAATG 8 cut(s) 229, 420, 692, 2007, 2139, 4989, 5810, 6828
Bse8I GATNNNNATC 4 cut(s) 1388, 3954, 6489, 6681
BseAI TCCGGA 2 cut(s) 3222, 6481
BseBI CCWGG 9 cut(s) 371, 400, 1754, 2418, 5095, 5115, 5485, 6087, 7322
BseCI ATCGAT 2 cut(s) 925, 4599
BseJI GATNNNNATC 4 cut(s) 1388, 3954, 6489, 6681
BseMI GCAATG 8 cut(s) 229, 420, 692, 2007, 2139, 4989, 5810, 6828
BsePI GCGCGC 1 cut(s) 7138
BseRI GAGGAG 4 cut(s) 1661, 4604, 6625, 6999
BseSI GKGCMC 1 cut(s) 4651
BseYI CCCAGC 4 cut(s) 1838, 2833, 3527, 4246
Bsh1236I CGCG 6 cut(s) 88, 4473, 5711, 6255, 6768, 7140
Bsh1285I CGRYCG 1 cut(s) 199
BshNI GGYRCC 1 cut(s) 6089
BshVI ATCGAT 2 cut(s) 925, 4599
BsiEI CGRYCG 1 cut(s) 199
BsiHKAI GWGCWC 8 cut(s) 250, 2249, 2377, 3868, 3934, 4735, 4992, 7075
BsiHKCI CYCGRG 3 cut(s) 3144, 5825, 7266
BsiSI CCGG 8 cut(s) 405, 1032, 1621, 2864, 3223, 5704, 6110, 6482
BslFI GGGAC 6 cut(s) 4, 2585, 5042, 6240, 6368, 6773
BsmBI CGTCTC 3 cut(s) 13, 1624, 6959
BsmFI GGGAC 6 cut(s) 4, 2585, 5042, 6240, 6368, 6773
BsmI GAATGC 2 cut(s) 1313, 6813
Bso31I GGTCTC 1 cut(s) 1108
BsoBI CYCGRG 3 cut(s) 3144, 5825, 7266
Bsp119I TTCGAA 3 cut(s) 3490, 3924, 4447
Bsp120I GGGCCC 1 cut(s) 4647
Bsp13I TCCGGA 2 cut(s) 3222, 6481
Bsp1407I TGTACA 3 cut(s) 1594, 2239, 5134
Bsp1720I GCTNAGC 2 cut(s) 4251, 5949
Bsp19I CCATGG 1 cut(s) 4882
Bsp68I TCGCGA 1 cut(s) 5711
BspDI ATCGAT 2 cut(s) 925, 4599
BspEI TCCGGA 2 cut(s) 3222, 6481
BspFNI CGCG 6 cut(s) 88, 4473, 5711, 6255, 6768, 7140
BspHI TCATGA 7 cut(s) 804, 2926, 4864, 5890, 6642, 6931, 7333
BspMAI CTGCAG 3 cut(s) 424, 4974, 5404
BspMI ACCTGC 1 cut(s) 3142
BspQI GCTCTTC 2 cut(s) 1887, 4206
BspT104I TTCGAA 3 cut(s) 3490, 3924, 4447
BspT107I GGYRCC 1 cut(s) 6089
BspTNI GGTCTC 1 cut(s) 1108
BsrBI CCGCTC 5 cut(s) 623, 2192, 3065, 4675, 6502
BsrDI GCAATG 8 cut(s) 229, 420, 692, 2007, 2139, 4989, 5810, 6828
BsrFI RCCGGY 1 cut(s) 1031
BsrGI TGTACA 3 cut(s) 1594, 2239, 5134
BssAI RCCGGY 1 cut(s) 1031
BssHII GCGCGC 1 cut(s) 7138
BssNAI GTATAC 1 cut(s) 1268
BssNI GRCGYC 3 cut(s) 54, 1636, 6952
BssSI CACGAG 2 cut(s) 6625, 7074
BssT1I CCWWGG 8 cut(s) 99, 646, 1411, 3265, 4197, 4882, 6170, 6670
Bst1107I GTATAC 1 cut(s) 1268
Bst2BI CACGAG 2 cut(s) 6625, 7074
Bst2UI CCWGG 9 cut(s) 371, 400, 1754, 2418, 5095, 5115, 5485, 6087, 7322
Bst6I CTCTTC 5 cut(s) 1887, 3843, 4206, 4444, 6962
BstACI GRCGYC 3 cut(s) 54, 1636, 6952
BstAUI TGTACA 3 cut(s) 1594, 2239, 5134
BstBAI YACGTR 4 cut(s) 467, 1088, 1106, 1979
BstBI TTCGAA 3 cut(s) 3490, 3924, 4447
BstDSI CCRYGG 2 cut(s) 4882, 5389
BstEII GGTNACC 1 cut(s) 6656
BstENI CCTNNNNNAGG 5 cut(s) 1757, 3224, 3269, 3634, 4229
BstFNI CGCG 6 cut(s) 88, 4473, 5711, 6255, 6768, 7140
BstH2I RGCGCY 1 cut(s) 5420
BstHHI GCGC 7 cut(s) 16, 999, 3244, 5419, 6243, 7140, 7142
BstMCI CGRYCG 1 cut(s) 199
BstNI CCWGG 9 cut(s) 371, 400, 1754, 2418, 5095, 5115, 5485, 6087, 7322
BstNSI RCATGY 6 cut(s) 2703, 5441, 5592, 5794, 5819, 7232
BstPAI GACNNNNGTC 1 cut(s) 3852
BstPI GGTNACC 1 cut(s) 6656
BstSFI CTRYAG 8 cut(s) 420, 2217, 2475, 3843, 3966, 4970, 5041, 5400
BstSLI GKGCMC 1 cut(s) 4651
BstSNI TACGTA 1 cut(s) 1979
BstUI CGCG 6 cut(s) 88, 4473, 5711, 6255, 6768, 7140
BstV2I GAAGAC 2 cut(s) 5360, 6240
BstX2I RGATCY 7 cut(s) 595, 2107, 2380, 4820, 5968, 6319, 6720
BstXI CCANNNNNNTGG 1 cut(s) 3946
BstYI RGATCY 7 cut(s) 595, 2107, 2380, 4820, 5968, 6319, 6720
BstZ17I GTATAC 1 cut(s) 1268
Bsu15I ATCGAT 2 cut(s) 925, 4599
Bsu36I CCTNAGG 2 cut(s) 23, 1344
BsuI GTATCC 4 cut(s) 77, 2957, 4671, 5481
BsuTUI ATCGAT 2 cut(s) 925, 4599
BtgI CCRYGG 2 cut(s) 4882, 5389
BtgZI GCGATG 3 cut(s) 1175, 3305, 4198
BtrI CACGTC 3 cut(s) 2342, 3110, 3371
BtsI GCAGTG 7 cut(s) 890, 1785, 3522, 3794, 4119, 4386, 4731
BtuMI TCGCGA 1 cut(s) 5711
BveI ACCTGC 1 cut(s) 3142
CaiI CAGNNNCTG 3 cut(s) 22, 1688, 4576
CciI TCATGA 7 cut(s) 804, 2926, 4864, 5890, 6642, 6931, 7333
CfoI GCGC 7 cut(s) 16, 999, 3244, 5419, 6243, 7140, 7142
Cfr10I RCCGGY 1 cut(s) 1031
ClaI ATCGAT 2 cut(s) 925, 4599
CseI GACGC 5 cut(s) 62, 1625, 2750, 6244, 6941
CspCI CAANNNNNGTGG 2 cut(s) 1815, 1850
DraI TTTAAA 1 cut(s) 1794
DriI GACNNNNNGTC 1 cut(s) 6034
EaeI YGGCCR 6 cut(s) 3, 1029, 2501, 2842, 4326, 7318
Eam1104I CTCTTC 5 cut(s) 1887, 3843, 4206, 4444, 6962
Eam1105I GACNNNNNGTC 1 cut(s) 6034
EarI CTCTTC 5 cut(s) 1887, 3843, 4206, 4444, 6962
Ecl136II GAGCTC 2 cut(s) 248, 4990
Eco105I TACGTA 1 cut(s) 1979
Eco130I CCWWGG 8 cut(s) 99, 646, 1411, 3265, 4197, 4882, 6170, 6670
Eco147I AGGCCT 5 cut(s) 3899, 4115, 5882, 5906, 6923
Eco24I GRGCYC 4 cut(s) 250, 4651, 4992, 5107
Eco31I GGTCTC 1 cut(s) 1108
Eco32I GATATC 1 cut(s) 848
Eco47I GGWCC 6 cut(s) 367, 2572, 2866, 4242, 6382, 6787
Eco53kI GAGCTC 2 cut(s) 248, 4990
Eco57I CTGAAG 8 cut(s) 2541, 3078, 4656, 4773, 5646, 6242, 6576, 7076
Eco81I CCTNAGG 2 cut(s) 23, 1344
Eco88I CYCGRG 3 cut(s) 3144, 5825, 7266
Eco91I GGTNACC 1 cut(s) 6656
EcoICRI GAGCTC 2 cut(s) 248, 4990
EcoNI CCTNNNNNAGG 5 cut(s) 1757, 3224, 3269, 3634, 4229
EcoO109I RGGNCCY 6 cut(s) 1166, 1243, 2572, 4648, 6382, 6787
EcoO65I GGTNACC 1 cut(s) 6656
EcoRI GAATTC 3 cut(s) 3338, 3920, 6295
EcoRII CCWGG 9 cut(s) 369, 398, 1752, 2416, 5093, 5113, 5483, 6085, 7320
EcoRV GATATC 1 cut(s) 848
EcoT14I CCWWGG 8 cut(s) 99, 646, 1411, 3265, 4197, 4882, 6170, 6670
EcoT22I ATGCAT 3 cut(s) 298, 1313, 3051
EcoT38I GRGCYC 4 cut(s) 250, 4651, 4992, 5107
ErhI CCWWGG 8 cut(s) 99, 646, 1411, 3265, 4197, 4882, 6170, 6670
Esp3I CGTCTC 3 cut(s) 13, 1624, 6959
FaqI GGGAC 6 cut(s) 4, 2585, 5042, 6240, 6368, 6773
FauI CCCGC 2 cut(s) 3070, 3660
FauNDI CATATG 2 cut(s) 3045, 3259
FbaI TGATCA 2 cut(s) 6490, 7276
FblI GTMKAC 5 cut(s) 1267, 2333, 3403, 3856, 7236
FriOI GRGCYC 4 cut(s) 250, 4651, 4992, 5107
GlaI GCGC 7 cut(s) 15, 998, 3243, 5418, 6242, 7139, 7141
GsaI CCCAGC 4 cut(s) 1842, 2837, 3531, 4250
GsuI CTGGAG 6 cut(s) 985, 5921, 6311, 6626, 7023, 7278
HaeII RGCGCY 1 cut(s) 5420
HapII CCGG 8 cut(s) 405, 1032, 1621, 2864, 3223, 5704, 6110, 6482
HgaI GACGC 5 cut(s) 62, 1625, 2750, 6244, 6941
HhaI GCGC 7 cut(s) 16, 999, 3244, 5419, 6243, 7140, 7142
Hin1I GRCGYC 3 cut(s) 54, 1636, 6952
Hin6I GCGC 7 cut(s) 14, 997, 3242, 5417, 6241, 7138, 7140
HinP1I GCGC 7 cut(s) 14, 997, 3242, 5417, 6241, 7138, 7140
HincII GTYRAC 6 cut(s) 1908, 2462, 2820, 3404, 4148, 5638
HindII GTYRAC 6 cut(s) 1908, 2462, 2820, 3404, 4148, 5638
HindIII AAGCTT 6 cut(s) 630, 1661, 2735, 4870, 4956, 7172
HpaII CCGG 8 cut(s) 405, 1032, 1621, 2864, 3223, 5704, 6110, 6482
Hpy99I CGWCG 5 cut(s) 56, 492, 3372, 3408, 4647
Hsp92I GRCGYC 3 cut(s) 54, 1636, 6952
HspAI GCGC 7 cut(s) 14, 997, 3242, 5417, 6241, 7138, 7140
KflI GGGWCCC 2 cut(s) 2572, 6382
Kpn2I TCCGGA 2 cut(s) 3222, 6481
KpnI GGTACC 1 cut(s) 6093
Ksp22I TGATCA 2 cut(s) 6490, 7276
LguI GCTCTTC 2 cut(s) 1887, 4206
MbiI CCGCTC 5 cut(s) 623, 2192, 3065, 4675, 6502
MfeI CAATTG 3 cut(s) 1095, 5310, 6120
MflI RGATCY 7 cut(s) 595, 2107, 2380, 4820, 5968, 6319, 6720
MlsI TGGCCA 2 cut(s) 2503, 7320
MluI ACGCGT 2 cut(s) 86, 6253
MluNI TGGCCA 2 cut(s) 2503, 7320
MlyI GAGTC 4 cut(s) 1441, 1508, 4079, 6044
MmeI TCCRAC 9 cut(s) 754, 1020, 1123, 1342, 2587, 3015, 4003, 4772, 7081
Mox20I TGGCCA 2 cut(s) 2503, 7320
Mph1103I ATGCAT 3 cut(s) 298, 1313, 3051
MroI TCCGGA 2 cut(s) 3222, 6481
MroXI GAANNNNTTC 3 cut(s) 1662, 6774, 7089
MscI TGGCCA 2 cut(s) 2503, 7320
MslI CAYNNNNRTG 6 cut(s) 1086, 1316, 5658, 5962, 6192, 6647
Msp20I TGGCCA 2 cut(s) 2503, 7320
MspA1I CMGCKG 9 cut(s) 989, 2837, 3683, 4093, 4250, 4576, 5225, 5624, 6007
MspI CCGG 8 cut(s) 405, 1032, 1621, 2864, 3223, 5704, 6110, 6482
MunI CAATTG 3 cut(s) 1095, 5310, 6120
Mva1269I GAATGC 2 cut(s) 1313, 6813
MvaI CCWGG 9 cut(s) 371, 400, 1754, 2418, 5095, 5115, 5485, 6087, 7322
MvnI CGCG 6 cut(s) 88, 4473, 5711, 6255, 6768, 7140
NciI CCSGG 3 cut(s) 406, 1622, 5705
NcoI CCATGG 1 cut(s) 4882
NdeI CATATG 2 cut(s) 3045, 3259
NruI TCGCGA 1 cut(s) 5711
NsiI ATGCAT 3 cut(s) 298, 1313, 3051
NspI RCATGY 6 cut(s) 2703, 5441, 5592, 5794, 5819, 7232
NspV TTCGAA 3 cut(s) 3490, 3924, 4447
OliI CACNNNNGTG 1 cut(s) 1086
PaeI GCATGC 1 cut(s) 5794
PaeR7I CTCGAG 3 cut(s) 3144, 5825, 7266
PagI TCATGA 7 cut(s) 804, 2926, 4864, 5890, 6642, 6931, 7333
PauI GCGCGC 1 cut(s) 7138
PceI AGGCCT 5 cut(s) 3899, 4115, 5882, 5906, 6923
PciI ACATGT 2 cut(s) 2699, 5437
PciSI GCTCTTC 2 cut(s) 1887, 4206
PcsI WCGNNNNNNNCGW 2 cut(s) 670, 7072
PctI GAATGC 2 cut(s) 1313, 6813
PdmI GAANNNNTTC 3 cut(s) 1662, 6774, 7089
PfeI GAWTC 9 cut(s) 958, 2453, 2797, 3605, 4624, 5012, 5129, 6104, 7262
PflFI GACNNNGTC 2 cut(s) 1635, 5550
PflMI CCANNNNNTGG 2 cut(s) 2840, 6365
PfoI TCCNGGA 1 cut(s) 5113
Ple19I CGATCG 1 cut(s) 199
PleI GAGTC 4 cut(s) 1441, 1507, 4078, 6043
PpsI GAGTC 4 cut(s) 1441, 1507, 4078, 6043
Ppu21I YACGTR 4 cut(s) 467, 1088, 1106, 1979
PpuMI RGGWCCY 3 cut(s) 2572, 6382, 6787
PscI ACATGT 2 cut(s) 2699, 5437
PshAI GACNNNNGTC 1 cut(s) 3852
PshBI ATTAAT 1 cut(s) 5448
PsiI TTATAA 1 cut(s) 2726
Psp124BI GAGCTC 2 cut(s) 250, 4992
Psp1406I AACGTT 1 cut(s) 3032
Psp5II RGGWCCY 3 cut(s) 2572, 6382, 6787
Psp6I CCWGG 9 cut(s) 369, 398, 1752, 2416, 5093, 5113, 5483, 6085, 7320
PspEI GGTNACC 1 cut(s) 6656
PspFI CCCAGC 4 cut(s) 1838, 2833, 3527, 4246
PspGI CCWGG 9 cut(s) 369, 398, 1752, 2416, 5093, 5113, 5483, 6085, 7320
PspOMI GGGCCC 1 cut(s) 4647
PspPPI RGGWCCY 3 cut(s) 2572, 6382, 6787
PspXI VCTCGAGB 2 cut(s) 3144, 5825
PsrI GAACNNNNNNTAC 2 cut(s) 2340, 2372
PstI CTGCAG 3 cut(s) 424, 4974, 5404
PstNI CAGNNNCTG 3 cut(s) 22, 1688, 4576
PsuI RGATCY 7 cut(s) 595, 2107, 2380, 4820, 5968, 6319, 6720
PsyI GACNNNGTC 2 cut(s) 1635, 5550
PteI GCGCGC 1 cut(s) 7138
PvuI CGATCG 1 cut(s) 199
PvuII CAGCTG 7 cut(s) 989, 2837, 3683, 4250, 4576, 5225, 6007
RruI TCGCGA 1 cut(s) 5711
RseI CAYNNNNRTG 6 cut(s) 1086, 1316, 5658, 5962, 6192, 6647
SacI GAGCTC 2 cut(s) 250, 4992
SalI GTCGAC 1 cut(s) 3402
SapI GCTCTTC 2 cut(s) 1887, 4206
ScaI AGTACT 3 cut(s) 2349, 3978, 5047
SchI GAGTC 4 cut(s) 1441, 1508, 4079, 6044
SfcI CTRYAG 8 cut(s) 420, 2217, 2475, 3843, 3966, 4970, 5041, 5400
Sfr274I CTCGAG 3 cut(s) 3144, 5825, 7266
SfuI TTCGAA 3 cut(s) 3490, 3924, 4447
SinI GGWCC 6 cut(s) 367, 2572, 2866, 4242, 6382, 6787
SlaI CTCGAG 3 cut(s) 3144, 5825, 7266
SmiMI CAYNNNNRTG 6 cut(s) 1086, 1316, 5658, 5962, 6192, 6647
SmlI CTYRAG 8 cut(s) 1124, 3144, 4109, 4134, 4586, 5825, 6309, 7266
SmoI CTYRAG 8 cut(s) 1124, 3144, 4109, 4134, 4586, 5825, 6309, 7266
SnaBI TACGTA 1 cut(s) 1979
SpeI ACTAGT 2 cut(s) 3719, 5683
SphI GCATGC 1 cut(s) 5794
SseBI AGGCCT 5 cut(s) 3899, 4115, 5882, 5906, 6923
SspI AATATT 6 cut(s) 1150, 1713, 3772, 4029, 4238, 5446
SstI GAGCTC 2 cut(s) 250, 4992
StuI AGGCCT 5 cut(s) 3899, 4115, 5882, 5906, 6923
StyI CCWWGG 8 cut(s) 99, 646, 1411, 3265, 4197, 4882, 6170, 6670
TaqII GACCGA 1 cut(s) 2219
TatI WGTACW 8 cut(s) 1594, 2239, 2347, 3976, 5045, 5134, 5662, 6420
TauI GCSGC 8 cut(s) 36, 39, 42, 45, 1890, 2195, 5624, 6502
TfiI GAWTC 9 cut(s) 958, 2453, 2797, 3605, 4624, 5012, 5129, 6104, 7262
TspGWI ACGGA 6 cut(s) 2643, 2788, 5406, 5708, 6842, 7195
Tth111I GACNNNGTC 2 cut(s) 1635, 5550
Van91I CCANNNNNTGG 2 cut(s) 2840, 6365
VpaK11BI GGWCC 6 cut(s) 367, 2572, 2866, 4242, 6382, 6787
VspI ATTAAT 1 cut(s) 5448
XagI CCTNNNNNAGG 5 cut(s) 1757, 3224, 3269, 3634, 4229
XbaI TCTAGA 3 cut(s) 133, 2377, 6299
XceI RCATGY 6 cut(s) 2703, 5441, 5592, 5794, 5819, 7232
XcmI CCANNNNNNNNNTGG 2 cut(s) 4928, 7064
XhoI CTCGAG 3 cut(s) 3144, 5825, 7266
XmiI GTMKAC 5 cut(s) 1267, 2333, 3403, 3856, 7236
XmnI GAANNNNTTC 3 cut(s) 1662, 6774, 7089
ZrmI AGTACT 3 cut(s) 2349, 3978, 5047
Zsp2I ATGCAT 3 cut(s) 298, 1313, 3051
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.