Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb2

Orthogroup ID

OG0008409

Physical Location & Seq

Genomic Coordinates Forward (+)

5939211 .. 5948514

Gene Structure 9304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_2g07180.t5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3075 bp

ATGAAGAAGGCGATAAGGAGCATAGAGGATCTGATCGAGGAGGTTCAGCTTCGCTTCGTGTGGTGGGCGCTGTTCGTCTTCGCTGTTTCCTACTTCTTGACGCATACAAGCAAATCAATGTGGATGAATCTGCCCATAGCAATCTTACTCGTTGCGGTATTACGCATGCTGTTAAATGAGGTGGAGTTTCGTTGGAAGGCTCCGAAGCCTGTTCGTCCGAAAACTTATTTGGCTCATTTGGAGAAGAAGCAGTTGTCTGTGAATGATTCGCGGCTTTCTACTTCACTGCCACCACCAAAATGGAAACGGAAGATTGGTTCTCCGATCGTGGAGGAGGCGATGAAAGATTTCATTGACAAGATTTTGAAGGATTTTGTGATTGATTTATGGTATTCGGATATAACACCGGACAAGGAGGCTCCGGAGCATATACGCGCAATTGTCATGGATGCTCTTGGTGAAGTATCAGGAAGAGTTAAAGAGATAAACCTTGTTGATTTGCTAACAAGGGATATAATAGATTTAATTGGAGATCATATAGAGCTTTTCAGAAGAAACCAAGCTGCCATAGGTGTTGATGTTATGAAAACATTGTCTTCAGAGGAGAGAGATGAAAGGTTAAAACATCATCTTATGGCTTCGAAGGAGCTTCATCCTGCGTTGATATCACCTGAGAGTGAGTACAAGTTTCTTCAGCGACTAATGGGTGGAGTGATAGCTGTGGTGCTCAGACCACGAGAAGCTCAATGTCCAGTTGTTCGATCCATTGCCAGAGAACTATTAACAAGCTTGGTGATCGAACCTGTTATGAATTTTGCAAGCCCTGGGTACATCAATGAGTTGATTGAATACGTTTTGGAAATCGTTAAAGATTATATCTTTAAAGATGTAGTTGGGGACCAGTCTACTTCAGGGGGAGTACATGATCATGATTCTCCGTTGAGAAAATATGCTACCTTTAATCAGACGACTGATATGACCTTGGCTAAAATTGAAAATCAGGGAGAAGCATCCTCGGATTATAACACATTCCAGGATGATCCTTTGCAGCCGCGGCCGGCTGTTTGGGCACGAGGGTTGGAGGCTGCGACACAGAGAAGGACTGAAGTTCTTACTCCTGAAAATCTAGAAAACATGTGGACAAAAGGAAGAAACTATAAAAAGAAAGAACACAAGAAAAAAATAACAAAGGGTTCAGGAGCAGATAGTGGTATACCAACTGGAAAGTTGGGGAATGAATTGCTAGCTAACAGGCATGACATTTCTACCGGACAGGAAGATAGATCTAATGTAAAGCTAACTCATGGGGCAAGTGTTGACACCCATTTTAGTGATGCAACTAAAAAGGAGTTACGGTTCTCTTCAGATGTCAATAAGGAATCAATTTCTAAGGAAGAGGATTTTTTTGATGAGTTGGATAAAAATAGAGATCTTGCTTCCAATGGAACTAAAAGTAGGCTTAAACGATCAAATAGCACTTCCGCTTTGAGAATCCAACCTGACACAAAAAAAGCATCGTCACAAGGAGGAGGTTCCATCATTTCAGAGTTTTATAGTCCTGAATTTGGCAGGCATGCAGAAAGGCGTGCTGGTAAGAGTACCTCGGATATGGTAGTCCGCAGTGTGGGACAACAAATTCCCAAGCTGAGGTCCCGGGTTATGGGAGCATACTTTGAGAAACTTGGGTCAAAATCTTTTGCAGTTTATTCAATTGCAGTGACGGATGCAGAAAACCGAACTTGGTTTGTGAAACGAAGATATAGGAATTTTGAGCGACTACACCGCCATCTCAAAGAAATTCCAAATTACACCTTACATTTGCCCCCCAAAAGGATATTCTCATCAAGCACTGAGGATGCTTTTGTTCATCAGCGATGTATCCAGCTTGACAGATATCTCCAGGATCTTTTGTCAATAGCGAACGTTGCTGAACAGCATGAAGTTTGGGATTTTTTAAGTGCTACCTCAAAGAATTACTCGTTTGGAAAATCTCCCTCGGTGATGAGAACTCTTGCAGTGAATGTGGATGAAGCTGTGGACGATATTGTTCGCCAGTTCAAAGGGGTTTCAGATGGCTTAATTCGTGCTGTTGCTGGTCCATCCACTTATGAGGGCTCATCTTCAGTTCCTGGATTGAACTTAACCTGGAATGGAGAAGAGACAAGTGAAAATGTTTCTAGGCAAAGTACTGGGGAAACACTGAACAGCTTTTCTGATGATGAGCCTGCCGAAAAAGATGCAACTGGTGACCCTGCAGGAGTCAGATTTAATATCCAGGATAGTGGGTGGCATTCAGACAATGAATTGGACTTTAAGGGTTCTTCCCCTCAAATTAAGCATTCAAAGAGCTTAGGGTTGGAGAAGAAAGATGTTTTGGTTTTGAAATCTGGGGCTGGTAATTATATCTTTCCTGGAGCAAGTGGTCCAGTGACCTCCAATCCTTTGGAACTGGAGGATCCAGTTGGAATGCCACCTGAGTGGACTCCACCCAATGTTAGTGTGCCTCTGTTGAATCTAGTGGACAAGGTATTTCAGCTTAAGAGAAGGGGATGGCTAAGAAGACAAGTCTTTTGGATGTCAAAACAAATACTACAGTTGATGATGGAAGATGCTATTGATGACTGGCTCTTGAGGCAGATTCAATTGCTTCGTAGGGAGGACACTATAGCTTCAGGAATTCGATGGCTTCAAGATGTCCTATGGCCCAATGGCACATTCTTCCTTAGAGTTGGTAATGCTAATGACAATCAAGACCCTCATTCAACCATGAACCAATTTGGTGGAAGCAAGGTTGGTAAACCAGGTTCTTTTGAGCAGCAACTAGAGGCTGCTCGCAGAGCTAGTGATCTGAAGAAACTGCTCTTTGATGGAGCTCCAACAGCCTTAGTCAGCTTAGTTGGATATAACCAGTACAGACGTTGTGCAAGAGATATTTATTTCTTCACTCAGTCTAATATATGTGTGAAGCAACTCGCGTATGCGATACTCGAGTTGTGTCTCGTATCAATATTCCCTGAACTTCGAGATCTTATTGTTGATATTCATGAGAAGACGCACTTTGATCAAACTGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0006605 GO:0006622 GO:0006623 GO:0006810 GO:0006886 GO:0007034 GO:0007041 GO:0008104 GO:0008150 GO:0008289 GO:0008333 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016482 GO:0019898 GO:0031090 GO:0031312 GO:0031313 GO:0031410 GO:0031982 GO:0033036 GO:0033365 GO:0034613 GO:0035091 GO:0042802 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045022 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061462 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098805 GO:0098927

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nexin_C PX PXA

Protein Analysis

1025

Amino Acids

115.88

Weight (kDa)

7.13

Isoelectric Point (pI)

46.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PXA	PF02194	107 - 285	1.1e-41	PXA domain
PX	PF00787	577 - 653	1.3e-13	PX domain
Nexin_C	PF08628	851 - 927	3.4e-15	Sorting nexin C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008409)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15900
fragaria_vesca	FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180
malus_domestica	MD05G1073000.v1.1 MD10G1087600.v1.1
prunus_persica	Prupe.8G113600_v2.0.a1 Prupe.8G113600_v2.0.a1
pyrus_communis	pycom05g06550 pycom10g06990
rosa_chinensis	RchiOBHm_Chr6g0259621
rosa_laevigata	RLG00000014517
rosa_multiflora	Rmu_sc0000536.1_g000017
rosa_roxburghii	Rroxscaffold_7G00206920
rosa_rugosa	Rorug05G0590000
rosa_samantha	Rh6AG106200 Rh6BG100700 Rh6CG095300 Rh6DG089200
rosa_wichuraiana	Rw6G009180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1023
AccI	GTMKAC	2 cut(s)	905, 1213
AccII	CGCG	4 cut(s)	271, 435, 1054, 2975
AccIII	TCCGGA	1 cut(s)	421
AciI	CCGC	7 cut(s)	155, 271, 1052, 1054, 1482, 1618, 1783
AclI	AACGTT	1 cut(s)	1923
AclWI	GGATC	6 cut(s)	36, 756, 1034, 1911, 2450, 2463
AcoI	YGGCCR	1 cut(s)	1055
AcsI	RAATTY	6 cut(s)	811, 1562, 1635, 1765, 1797, 2676
AcuI	CTGAAG	8 cut(s)	582, 677, 894, 1125, 1347, 2106, 2655, 2870
AfaI	GTAC	6 cut(s)	683, 830, 921, 1600, 2188, 2912
AfiI	CCNNNNNNNGG	5 cut(s)	1565, 1624, 1647, 1660, 1830
AflII	CTTAAG	1 cut(s)	2537
AflIII	ACRYGT	1 cut(s)	1134
AjnI	CCWGG	8 cut(s)	823, 1032, 1899, 2128, 2144, 2274, 2410, 2800
AjuI	GAANNNNNNNTTGG	8 cut(s)	212, 244, 1820, 1852, 2357, 2389, 2699, 2731
AleI	CACNNNNGTG	1 cut(s)	2476
AloI	GAACNNNNNNTCC	4 cut(s)	301, 333, 1340, 1372
Alw21I	GWGCWC	2 cut(s)	729, 2875
Alw26I	GTCTC	2 cut(s)	2153, 3002
AlwI	GGATC	6 cut(s)	36, 756, 1034, 1911, 2450, 2463
AlwNI	CAGNNNCTG	1 cut(s)	2129
Ama87I	CYCGRG	2 cut(s)	1653, 2987
Aor13HI	TCCGGA	1 cut(s)	421
AoxI	GGCC	2 cut(s)	1055, 2702
ApeKI	GCWGC	5 cut(s)	563, 1048, 1085, 2815, 2828
ApoI	RAATTY	6 cut(s)	811, 1562, 1635, 1765, 1797, 2676
ArsI	GACNNNNNNTTYG	2 cut(s)	2553, 2585
Asp700I	GAANNNNTTC	1 cut(s)	347
AspLEI	GCGC	2 cut(s)	70, 437
AspS9I	GGNCC	5 cut(s)	898, 1650, 2096, 2423, 2703
AsuC2I	CCSGG	2 cut(s)	1654, 1655
AsuHPI	GGTGA	5 cut(s)	470, 660, 805, 2011, 2258
AsuII	TTCGAA	1 cut(s)	641
AsuNHI	GCTAGC	1 cut(s)	1243
AvaI	CYCGRG	2 cut(s)	1653, 2987
AvaII	GGWCC	4 cut(s)	898, 1650, 2096, 2423
BaeGI	GKGCMC	1 cut(s)	1072
BaeI	ACNNNNGTAYC	2 cut(s)	2975, 3008
BamHI	GGATCC	1 cut(s)	2455
BanII	GRGCYC	2 cut(s)	2117, 2875
BauI	CACGAG	2 cut(s)	735, 1071
BbsI	GAAGAC	4 cut(s)	70, 588, 2566, 3056
Bbv12I	GWGCWC	2 cut(s)	729, 2875
BbvCI	CCTCAGC	1 cut(s)	1646
BbvI	GCAGC	5 cut(s)	550, 1060, 1072, 2815, 2827
BccI	CCATC	8 cut(s)	1544, 1794, 2066, 2107, 2544, 2596, 2676, 2861
BcgI	CGANNNNNNTGC	2 cut(s)	2219, 2253
BciT130I	CCWGG	8 cut(s)	825, 1034, 1901, 2130, 2146, 2276, 2412, 2802
BciVI	GTATCC	1 cut(s)	1889
BclI	TGATCA	2 cut(s)	925, 3061
BcnI	CCSGG	2 cut(s)	1654, 1655
BcoDI	GTCTC	2 cut(s)	2153, 3002
BfaI	CTAG	6 cut(s)	1127, 1244, 2178, 2516, 2822, 2841
BfmI	CTRYAG	3 cut(s)	2253, 2591, 2664
BfoI	RGCGCY	1 cut(s)	71
BfrI	CTTAAG	1 cut(s)	2537
BfuI	GTATCC	1 cut(s)	1889
BglII	AGATCT	3 cut(s)	1283, 1429, 3025
BisI	GCNGC	8 cut(s)	272, 564, 1049, 1052, 1055, 1086, 2816, 2829
BlsI	GCNGC	8 cut(s)	273, 565, 1050, 1053, 1056, 1087, 2817, 2830
BmcAI	AGTACT	1 cut(s)	2188
Bme18I	GGWCC	4 cut(s)	898, 1650, 2096, 2423
BmeT110I	CYCGRG	2 cut(s)	1653, 2987
BmgT120I	GGNCC	5 cut(s)	898, 1650, 2096, 2423, 2703
BmiI	GGNNCC	6 cut(s)	201, 420, 899, 1534, 1652, 2457
BmrI	ACTGGG	1 cut(s)	2199
BmsI	GCATC	8 cut(s)	439, 1019, 1324, 1523, 1714, 1846, 2227, 2599
BmtI	GCTAGC	1 cut(s)	1247
BmuI	ACTGGG	1 cut(s)	2199
BpiI	GAAGAC	4 cut(s)	70, 588, 2566, 3056
BpmI	CTGGAG	3 cut(s)	1883, 2433, 2471
Bpu10I	CCTNAGC	2 cut(s)	1646, 2350
Bpu14I	TTCGAA	1 cut(s)	641
BpuEI	CTTGAG	1 cut(s)	2650
BpuMI	CCSGG	2 cut(s)	1654, 1655
BsaJI	CCNNGG	8 cut(s)	823, 824, 981, 1014, 1052, 1602, 1653, 1995
BsaWI	WCCGGW	3 cut(s)	406, 421, 1268
BsaXI	ACNNNNNCTCC	2 cut(s)	1340, 1370
Bsc4I	CCNNNNNNNGG	5 cut(s)	1565, 1624, 1647, 1660, 1830
Bse118I	RCCGGY	1 cut(s)	1057
Bse3DI	GCAATG	1 cut(s)	765
BseAI	TCCGGA	1 cut(s)	421
BseBI	CCWGG	8 cut(s)	825, 1034, 1901, 2130, 2146, 2276, 2412, 2802
BseDI	CCNNGG	8 cut(s)	823, 824, 981, 1014, 1052, 1602, 1653, 1995
BseLI	CCNNNNNNNGG	5 cut(s)	1565, 1624, 1647, 1660, 1830
BseMI	GCAATG	1 cut(s)	765
BseMII	CTCAG	6 cut(s)	663, 742, 1637, 1842, 2466, 2960
BseRI	GAGGAG	4 cut(s)	53, 347, 617, 1542
BseSI	GKGCMC	1 cut(s)	1072
BseX3I	CGGCCG	1 cut(s)	1055
BseXI	GCAGC	5 cut(s)	550, 1060, 1072, 2815, 2827
Bsh1236I	CGCG	4 cut(s)	271, 435, 1054, 2975
Bsh1285I	CGRYCG	2 cut(s)	327, 1058
BshFI	GGCC	2 cut(s)	1057, 2704
BsiEI	CGRYCG	2 cut(s)	327, 1058
BsiHKAI	GWGCWC	2 cut(s)	729, 2875
BsiHKCI	CYCGRG	2 cut(s)	1653, 2987
BsiSI	CCGG	5 cut(s)	407, 422, 1058, 1269, 1654
BslFI	GGGAC	3 cut(s)	911, 1636, 1641
BslI	CCNNNNNNNGG	5 cut(s)	1565, 1624, 1647, 1660, 1830
BsmAI	GTCTC	2 cut(s)	2153, 3002
BsmFI	GGGAC	3 cut(s)	911, 1636, 1641
BsmI	GAATGC	3 cut(s)	2290, 2338, 2472
BsnI	GGCC	2 cut(s)	1057, 2704
BsoBI	CYCGRG	2 cut(s)	1653, 2987
Bsp119I	TTCGAA	1 cut(s)	641
Bsp1286I	GDGCHC	4 cut(s)	729, 1072, 2117, 2875
Bsp13I	TCCGGA	1 cut(s)	421
BspACI	CCGC	7 cut(s)	155, 271, 1052, 1054, 1482, 1618, 1783
BspANI	GGCC	2 cut(s)	1057, 2704
BspCNI	CTCAG	6 cut(s)	664, 741, 1638, 1843, 2467, 2959
BspEI	TCCGGA	1 cut(s)	421
BspFNI	CGCG	4 cut(s)	271, 435, 1054, 2975
BspHI	TCATGA	2 cut(s)	928, 3043
BspLI	GGNNCC	6 cut(s)	201, 420, 899, 1534, 1652, 2457
BspMAI	CTGCAG	1 cut(s)	2257
BspOI	GCTAGC	1 cut(s)	1247
BspPI	GGATC	6 cut(s)	36, 756, 1034, 1911, 2450, 2463
BspT104I	TTCGAA	1 cut(s)	641
BspTI	CTTAAG	1 cut(s)	2537
BsrDI	GCAATG	1 cut(s)	765
BsrFI	RCCGGY	1 cut(s)	1057
BssAI	RCCGGY	1 cut(s)	1057
BssECI	CCNNGG	8 cut(s)	823, 824, 981, 1014, 1052, 1602, 1653, 1995
BssNAI	GTATAC	1 cut(s)	1214
BssSI	CACGAG	2 cut(s)	735, 1071
BssT1I	CCWWGG	1 cut(s)	981
Bst1107I	GTATAC	1 cut(s)	1214
Bst2BI	CACGAG	2 cut(s)	735, 1071
Bst2UI	CCWGG	8 cut(s)	825, 1034, 1901, 2130, 2146, 2276, 2412, 2802
Bst4CI	ACNGT	3 cut(s)	1356, 2595, 3070
Bst6I	CTCTTC	4 cut(s)	466, 1366, 1389, 2151
BstAFI	CTTAAG	1 cut(s)	2537
BstBI	TTCGAA	1 cut(s)	641
BstC8I	GCNNGC	9 cut(s)	167, 820, 1059, 1245, 1571, 1575, 1587, 2226, 2833
BstDSI	CCRYGG	1 cut(s)	1052
BstEII	GGTNACC	1 cut(s)	2246
BstFNI	CGCG	4 cut(s)	271, 435, 1054, 2975
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	2 cut(s)	70, 437
BstMAI	GTCTC	2 cut(s)	2153, 3002
BstMCI	CGRYCG	2 cut(s)	327, 1058
BstMWI	GCNNNNNNNGC	6 cut(s)	1054, 1067, 1925, 2632, 2837, 2879
BstNI	CCWGG	8 cut(s)	825, 1034, 1901, 2130, 2146, 2276, 2412, 2802
BstNSI	RCATGY	3 cut(s)	169, 1138, 1577
BstPI	GGTNACC	1 cut(s)	2246
BstSFI	CTRYAG	3 cut(s)	2253, 2591, 2664
BstSLI	GKGCMC	1 cut(s)	1072
BstUI	CGCG	4 cut(s)	271, 435, 1054, 2975
BstV1I	GCAGC	5 cut(s)	550, 1060, 1072, 2815, 2827
BstV2I	GAAGAC	4 cut(s)	70, 588, 2566, 3056
BstX2I	RGATCY	6 cut(s)	28, 1283, 1429, 1903, 2455, 3025
BstXI	CCANNNNNNTGG	5 cut(s)	300, 2282, 2443, 2478, 2780
BstYI	RGATCY	6 cut(s)	28, 1283, 1429, 1903, 2455, 3025
BstZ17I	GTATAC	1 cut(s)	1214
BstZI	CGGCCG	1 cut(s)	1055
BsuI	GTATCC	1 cut(s)	1889
BsuRI	GGCC	2 cut(s)	1057, 2704
BtgI	CCRYGG	1 cut(s)	1052
BtgZI	GCGATG	2 cut(s)	353, 1888
BtsI	GCAGTG	4 cut(s)	284, 1627, 1722, 2022
BtsIMutI	CAGTG	7 cut(s)	284, 1627, 1722, 1848, 2022, 2198, 2433
Cac8I	GCNNGC	9 cut(s)	167, 820, 1059, 1245, 1571, 1575, 1587, 2226, 2833
CaiI	CAGNNNCTG	1 cut(s)	2129
CciI	TCATGA	2 cut(s)	928, 3043
CfoI	GCGC	2 cut(s)	70, 437
Cfr10I	RCCGGY	1 cut(s)	1057
Cfr13I	GGNCC	5 cut(s)	898, 1650, 2096, 2423, 2703
Cfr42I	CCGCGG	1 cut(s)	1055
Cfr9I	CCCGGG	1 cut(s)	1653
CseI	GACGC	2 cut(s)	109, 3061
CsiI	ACCWGGT	1 cut(s)	2800
Csp6I	GTAC	6 cut(s)	682, 829, 920, 1599, 2187, 2911
CviQI	GTAC	6 cut(s)	682, 829, 920, 1599, 2187, 2911
DraI	TTTAAA	1 cut(s)	883
EaeI	YGGCCR	1 cut(s)	1055
EagI	CGGCCG	1 cut(s)	1055
Eam1104I	CTCTTC	4 cut(s)	466, 1366, 1389, 2151
EarI	CTCTTC	4 cut(s)	466, 1366, 1389, 2151
Ecl136II	GAGCTC	1 cut(s)	2873
EclXI	CGGCCG	1 cut(s)	1055
Eco130I	CCWWGG	1 cut(s)	981
Eco24I	GRGCYC	2 cut(s)	2117, 2875
Eco32I	GATATC	2 cut(s)	666, 1895
Eco47I	GGWCC	4 cut(s)	898, 1650, 2096, 2423
Eco52I	CGGCCG	1 cut(s)	1055
Eco53kI	GAGCTC	1 cut(s)	2873
Eco57I	CTGAAG	8 cut(s)	582, 677, 894, 1125, 1347, 2106, 2655, 2870
Eco88I	CYCGRG	2 cut(s)	1653, 2987
Eco91I	GGTNACC	1 cut(s)	2246
EcoICRI	GAGCTC	1 cut(s)	2873
EcoO109I	RGGNCCY	1 cut(s)	1650
EcoO65I	GGTNACC	1 cut(s)	2246
EcoRI	GAATTC	1 cut(s)	2676
EcoRII	CCWGG	8 cut(s)	823, 1032, 1899, 2128, 2144, 2274, 2410, 2800
EcoRV	GATATC	2 cut(s)	666, 1895
EcoT14I	CCWWGG	1 cut(s)	981
EcoT38I	GRGCYC	2 cut(s)	2117, 2875
ErhI	CCWWGG	1 cut(s)	981
FalI	AAGNNNNNCTT	2 cut(s)	3041, 3073
FaqI	GGGAC	3 cut(s)	911, 1636, 1641
FbaI	TGATCA	2 cut(s)	925, 3061
FblI	GTMKAC	2 cut(s)	905, 1213
Fnu4HI	GCNGC	8 cut(s)	272, 564, 1049, 1052, 1055, 1086, 2816, 2829
FriOI	GRGCYC	2 cut(s)	2117, 2875
Fsp4HI	GCNGC	8 cut(s)	272, 564, 1049, 1052, 1055, 1086, 2816, 2829
FspBI	CTAG	6 cut(s)	1127, 1244, 2178, 2516, 2822, 2841
GlaI	GCGC	2 cut(s)	69, 436
GluI	GCNGC	8 cut(s)	272, 564, 1049, 1052, 1055, 1086, 2816, 2829
GsuI	CTGGAG	3 cut(s)	1883, 2433, 2471
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	2 cut(s)	1057, 2704
HapII	CCGG	5 cut(s)	407, 422, 1058, 1269, 1654
HgaI	GACGC	2 cut(s)	109, 3061
HhaI	GCGC	2 cut(s)	70, 437
Hin6I	GCGC	2 cut(s)	68, 435
HinP1I	GCGC	2 cut(s)	68, 435
HincII	GTYRAC	1 cut(s)	1318
HindII	GTYRAC	1 cut(s)	1318
HindIII	AAGCTT	1 cut(s)	787
HinfI	GANTC	9 cut(s)	127, 266, 932, 1379, 1491, 2259, 2482, 2512, 2638
HpaII	CCGG	5 cut(s)	407, 422, 1058, 1269, 1654
HphI	GGTGA	5 cut(s)	470, 660, 805, 2011, 2258
Hpy166II	GTNNAC	8 cut(s)	906, 1140, 1214, 1318, 2038, 2481, 2521, 2798
Hpy8I	GTNNAC	8 cut(s)	906, 1140, 1214, 1318, 2038, 2481, 2521, 2798
HpyAV	CCTTC	5 cut(s)	190, 361, 637, 1092, 2538
HpyCH4III	ACNGT	3 cut(s)	1356, 2595, 3070
HpyCH4IV	ACGT	3 cut(s)	852, 1923, 2917
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1054, 1067, 1925, 2632, 2837, 2879
HpySE526I	ACGT	3 cut(s)	852, 1923, 2917
HspAI	GCGC	2 cut(s)	68, 435
Kpn2I	TCCGGA	1 cut(s)	421
KroI	GCCGGC	1 cut(s)	1057
KroNI	GCCGGC	1 cut(s)	1059
Ksp22I	TGATCA	2 cut(s)	925, 3061
KspI	CCGCGG	1 cut(s)	1055
Lsp1109I	GCAGC	5 cut(s)	550, 1060, 1072, 2815, 2827
LweI	GCATC	8 cut(s)	439, 1019, 1324, 1523, 1714, 1846, 2227, 2599
MabI	ACCWGGT	1 cut(s)	2800
MaeI	CTAG	6 cut(s)	1127, 1244, 2178, 2516, 2822, 2841
MaeII	ACGT	3 cut(s)	852, 1923, 2917
MaeIII	GTNAC	5 cut(s)	1350, 1518, 1717, 2246, 2428
MfeI	CAATTG	3 cut(s)	438, 1710, 2642
MflI	RGATCY	6 cut(s)	28, 1283, 1429, 1903, 2455, 3025
MhlI	GDGCHC	4 cut(s)	729, 1072, 2117, 2875
MlyI	GAGTC	2 cut(s)	2268, 2476
MmeI	TCCRAC	8 cut(s)	173, 1059, 1395, 1519, 2337, 2443, 2878, 2900
MroI	TCCGGA	1 cut(s)	421
MroNI	GCCGGC	1 cut(s)	1057
MroXI	GAANNNNTTC	1 cut(s)	347
MslI	CAYNNNNRTG	4 cut(s)	298, 927, 1329, 2476
MspA1I	CMGCKG	1 cut(s)	1054
MspCI	CTTAAG	1 cut(s)	2537
MspI	CCGG	5 cut(s)	407, 422, 1058, 1269, 1654
MunI	CAATTG	3 cut(s)	438, 1710, 2642
Mva1269I	GAATGC	3 cut(s)	2290, 2338, 2472
MvaI	CCWGG	8 cut(s)	825, 1034, 1901, 2130, 2146, 2276, 2412, 2802
MvnI	CGCG	4 cut(s)	271, 435, 1054, 2975
MwoI	GCNNNNNNNGC	6 cut(s)	1054, 1067, 1925, 2632, 2837, 2879
NaeI	GCCGGC	1 cut(s)	1059
NciI	CCSGG	2 cut(s)	1654, 1655
NgoMIV	GCCGGC	1 cut(s)	1057
NheI	GCTAGC	1 cut(s)	1243
NlaIV	GGNNCC	6 cut(s)	201, 420, 899, 1534, 1652, 2457
NmuCI	GTSAC	4 cut(s)	1518, 1717, 2246, 2428
NspI	RCATGY	3 cut(s)	169, 1138, 1577
NspV	TTCGAA	1 cut(s)	641
OliI	CACNNNNGTG	1 cut(s)	2476
PaeI	GCATGC	2 cut(s)	169, 1577
PaeR7I	CTCGAG	1 cut(s)	2987
PagI	TCATGA	2 cut(s)	928, 3043
PasI	CCCWGGG	1 cut(s)	824
PciI	ACATGT	1 cut(s)	1134
PctI	GAATGC	3 cut(s)	2290, 2338, 2472
PdiI	GCCGGC	1 cut(s)	1059
PdmI	GAANNNNTTC	1 cut(s)	347
PfeI	GAWTC	7 cut(s)	127, 266, 932, 1379, 1491, 2512, 2638
PfoI	TCCNGGA	5 cut(s)	1032, 1899, 2128, 2274, 2410
PkrI	GCNGC	8 cut(s)	273, 565, 1050, 1053, 1056, 1087, 2817, 2830
Ple19I	CGATCG	1 cut(s)	327
PleI	GAGTC	2 cut(s)	2267, 2476
PpsI	GAGTC	2 cut(s)	2267, 2476
PpuMI	RGGWCCY	1 cut(s)	1650
PscI	ACATGT	1 cut(s)	1134
PsiI	TTATAA	1 cut(s)	1023
Psp124BI	GAGCTC	1 cut(s)	2875
Psp1406I	AACGTT	1 cut(s)	1923
Psp5II	RGGWCCY	1 cut(s)	1650
Psp6I	CCWGG	8 cut(s)	823, 1032, 1899, 2128, 2144, 2274, 2410, 2800
PspEI	GGTNACC	1 cut(s)	2246
PspGI	CCWGG	8 cut(s)	823, 1032, 1899, 2128, 2144, 2274, 2410, 2800
PspN4I	GGNNCC	6 cut(s)	201, 420, 899, 1534, 1652, 2457
PspPI	GGNCC	5 cut(s)	898, 1650, 2096, 2423, 2703
PspPPI	RGGWCCY	1 cut(s)	1650
PspXI	VCTCGAGB	1 cut(s)	2987
PsrI	GAACNNNNNNTAC	2 cut(s)	2788, 2820
PstI	CTGCAG	1 cut(s)	2257
PstNI	CAGNNNCTG	1 cut(s)	2129
PsuI	RGATCY	6 cut(s)	28, 1283, 1429, 1903, 2455, 3025
PvuI	CGATCG	1 cut(s)	327
RsaI	GTAC	6 cut(s)	683, 830, 921, 1600, 2188, 2912
RsaNI	GTAC	6 cut(s)	682, 829, 920, 1599, 2187, 2911
RseI	CAYNNNNRTG	4 cut(s)	298, 927, 1329, 2476
SacI	GAGCTC	1 cut(s)	2875
SacII	CCGCGG	1 cut(s)	1055
SatI	GCNGC	8 cut(s)	272, 564, 1049, 1052, 1055, 1086, 2816, 2829
Sau96I	GGNCC	5 cut(s)	898, 1650, 2096, 2423, 2703
SbfI	CCTGCAGG	1 cut(s)	2257
ScaI	AGTACT	1 cut(s)	2188
SchI	GAGTC	2 cut(s)	2268, 2476
SdaI	CCTGCAGG	1 cut(s)	2257
SduI	GDGCHC	4 cut(s)	729, 1072, 2117, 2875
SexAI	ACCWGGT	1 cut(s)	2800
SfaNI	GCATC	8 cut(s)	439, 1019, 1324, 1523, 1714, 1846, 2227, 2599
SfcI	CTRYAG	3 cut(s)	2253, 2591, 2664
Sfr274I	CTCGAG	1 cut(s)	2987
Sfr303I	CCGCGG	1 cut(s)	1055
SfuI	TTCGAA	1 cut(s)	641
SgrBI	CCGCGG	1 cut(s)	1055
SinI	GGWCC	4 cut(s)	898, 1650, 2096, 2423
SlaI	CTCGAG	1 cut(s)	2987
SmaI	CCCGGG	1 cut(s)	1655
SmiMI	CAYNNNNRTG	4 cut(s)	298, 927, 1329, 2476
SmlI	CTYRAG	3 cut(s)	2537, 2629, 2987
SmoI	CTYRAG	3 cut(s)	2537, 2629, 2987
SphI	GCATGC	2 cut(s)	169, 1577
Sse8387I	CCTGCAGG	1 cut(s)	2257
SsiI	CCGC	7 cut(s)	155, 271, 1052, 1054, 1482, 1618, 1783
SspI	AATATT	1 cut(s)	3009
SspMI	CTAG	6 cut(s)	1127, 1244, 2178, 2516, 2822, 2841
SstI	GAGCTC	1 cut(s)	2875
StyI	CCWWGG	1 cut(s)	981
TaaI	ACNGT	3 cut(s)	1356, 2595, 3070
TaiI	ACGT	3 cut(s)	855, 1926, 2920
TaqI	TCGA	7 cut(s)	36, 641, 760, 798, 2680, 2988, 3022
TatI	WGTACW	4 cut(s)	681, 919, 2186, 2910
TauI	GCSGC	3 cut(s)	274, 1054, 1057
TfiI	GAWTC	7 cut(s)	127, 266, 932, 1379, 1491, 2512, 2638
TscAI	CASTG	7 cut(s)	291, 1627, 1722, 1855, 2022, 2205, 2433
TseFI	GTSAC	4 cut(s)	1518, 1717, 2246, 2428
TseI	GCWGC	5 cut(s)	563, 1048, 1085, 2815, 2828
Tsp45I	GTSAC	4 cut(s)	1518, 1717, 2246, 2428
TspGWI	ACGGA	3 cut(s)	322, 927, 1736
TspMI	CCCGGG	1 cut(s)	1653
TspRI	CASTG	7 cut(s)	291, 1627, 1722, 1855, 2022, 2205, 2433
Vha464I	CTTAAG	1 cut(s)	2537
VpaK11BI	GGWCC	4 cut(s)	898, 1650, 2096, 2423
XapI	RAATTY	6 cut(s)	811, 1562, 1635, 1765, 1797, 2676
XbaI	TCTAGA	1 cut(s)	1126
XceI	RCATGY	3 cut(s)	169, 1138, 1577
XcmI	CCANNNNNNNNNTGG	1 cut(s)	297
XhoI	CTCGAG	1 cut(s)	2987
XmaI	CCCGGG	1 cut(s)	1653
XmiI	GTMKAC	2 cut(s)	905, 1213
XmnI	GAANNNNTTC	1 cut(s)	347
XspI	CTAG	6 cut(s)	1127, 1244, 2178, 2516, 2822, 2841
ZrmI	AGTACT	1 cut(s)	2188

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.