Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0008409

Physical Location & Seq

Genomic Coordinates Reverse (-)

14184570 .. 14194763

Gene Structure 10194 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G113600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3075 bp

ATGAAGCCCATGCAGACCATACAAGATCTGATCGAGGAGATTAAGCTCCGAGTGGTTTGGTGGGCCTTGTTTGTCTTCTGCGTTACCTACTTCCTGTCCCATTCGAGTAAATCAATGTGGATGAATATACCAATATCAATTTTGTTGGTTTCCGCATTACGTTTTCTATTAAATAATGTGGAATTCCATTGGAAGGTTCAAAGACCTGTTCGACCGCAGTCATATTTGTCTCATTTGGAGAAGAAACAGTTGTCAGTCAATGATCCACGCCTTTCTACCGGGCCTCCACCACCAAGGTGGAAGAGGAAAATTGGTTCTCCAATCGTAGAGGATGCGATGAGTGATTTCATTGACAAAATTTTAAAGGATTTCGTAATTGATTTATGGTATTCAGATATAACACCAGACAAGGAGGCTCCAGAGCAAATACGAGTGATAATCATGGATGCTCTTGGTGAAGTATCAGGAAGAGTTAAAGAGATAAACCTTGTTGACTTGCTGACAAGGGATATAATTGATTTAATAGGGGATCATATGGAGCTTTTCAGAAAAAACCAAGCTGCTATAGGTGTTGATGTTATGAAAACTTTGTCTTCAGAGGAGAGAGATGATAGGTTAAAACATCATCTCATGGCTTCGAAGGAGCTCCATCCTGCATTGATATCACCTGAGAGTGAGTACAAGGTTCTTCAGCGGCTGATGGGTGGAGTGTTAGCTGTGGTTTTAAGGCCGCGAGAAGCTCAATGTCCAGTGGTGCGATCTATTGCCAGAGAACTTCTTACAAGCTTGGTAATCCAACCTGTTCTGAATTTCGCAAGCCCTGGGTATATCAACGAATTGATTGAATACATTTTGCTAGCCATTAAAGATGAAATCACTAAAGTGGTAGCGGGTGACCAGTCAACTGCAGGGGGTGTACCTGATCATGGTTCTCCATTGAACAAATATGCAACCTTTAATCAAAGAACTGATATGATATTGTCTAAAGTTGACAATCAGAGAGAAAAATCCTCAGATTATAACCCATTCCAGGAAGATCCTTTGCAGCCACGGCCTGCTGATTGGGCAAGAATTTTGGAGGCTGCGACACAGAGAAGGACTGAAGTTCTTGCTCCTGAAAATCTTGAAAACATGTGGACGAAAGGGAGAAATTACAAAAGAAAAGAGCACAAGAAAAAGATAAAAGCAACTCAGGAACATACACCTGTGAGTTCTGGAGTAGATAGTGCTGTACCTGCTAGAAAGCTGGGGAACGAAATGGTAGCTGACAGGCATGAAATTTCTACAGGAATAGAGGATAAATCTATTGTGAAGCTAACACGTGAGACAAGCTTAGATTCTCAGTTGAGTGATGGGACCAAAAAAGAGATGCAGTTCTCTTTGGATCCCAGCAAAAAATCATATGCTGAGGGTGGGAATCTTGTTGATGAATTGGAGGACATTGGAAGCCTTGCTGCTGATGGAAATAAAAGTAGGCTTAAAAGATCAAATAGCACTTCTGCTCTAAAAATCCAACCAGACACAAAAAGGGCATTCACAGAAGGTGGAGGGTCTATCATATCAGAGTTCTATAGCCCTGAGTTTGGGAGGCGCAGAGAAGAGCATATTGGTAAGAGTGCCTCAGATATGGTAGCCCATTGTGTGGGACAACAAGTTCCCAAGCTCAGATGCCGGGTTATGGGCGCATACTTTGAGAAACTTGGGTCAAAATCTTTTGCAGTTTATTCAATTGCTGTTACAGATTCAGAAAACAGAACTTGGTTTGTGAAAAGAAGATATAGGAATTTTGAGCGATTACATCGCCATCTTAAAGAAATTCCAAATTACACTTTACATTTGCCACCCAAAAGAATATTTTCGTCAAGCACAGAGGACGCTTTCGTTCATCAGCGATGTATTCAGCTGGACAAATATCTGCAGGATCTCTTGTCAATAGCTAACGTTGCTGAACAGCATGAAGTGTGGGATTTTTTAAGTGGTTCCTCAAAGAATTACGCTTTTGGAAAATCTCCCTCAGTGATGAGAACTCTTGCAGTCAATGTGGATGATGCTGTGGATGATATTGTACGCCAGTTCAAAGGGGTTTCAGATGGCTTAATGCGTAAAGTTGTTGGTTCTCCCACATCTGAGGCCTCATCTTCAATTTCTGCATGGAACTTGTCCACAAATGCAGATGAGACAGGCGTACGTGCTATTAGGCAAAATACAGTGGAAACAACAAATAGCTTTTCTGATAATGAGGATGGTGATAAAGATAAAAGTTGTGACCCTGAGGAAGCAGGATCTGGTGCACAAGAAAATGGGTGGCATTCAGATAATGAATTGAACTCCAAGGGTTATCCACGTAGGGTTATACATACAAGGAGCTTAGGTTCGGAGAAGAAAGATGATTTAGCTGGGGAGGGTGGCTTTCCTGCAGCAAATTTTACAGCAACCTCCAGAAATTTGGAGGATCCAGTTGGAATGCCACCTGAGTGGACTCCACCCAATGTTAGCGTACCTTTGTTGAATCTAGTGGACAAGGTATTTCAGCTTAAGAGAAGGGGCTGGCTGAGAAGACAGGTCTTTTGGATATCAAAACAAATATTACAGTTAATGATGGAGGATGCTATTGATGACTGGCTCTTGACGCAGATTCATTGGCTTCGGAGGGAGGATACTATTGCTTCGGGAATTCGGTGGCTTAAAGATGTTCTGTGGCCCAATGGCACATTCTTCCTTAGACTCGGAAATGCTCAAGACGGTAATGAAAACCCTTTTCAAAATATAAGTCAATTGGGTGGCAGTAAGGCTGATAAACCGGGGTCTTTTGAGCAGCAGCTTGAGGCTGCTCGTAGAGCTAGTGATATCAAAAAAATGCTCTTTGATGGAACTCCAACTGCCTTAGTCAGCTTAATCGGGCATAAGCAGTACAGACGTTGTGCAAGAGACATTTATTATTTCACTCAGTCTACTATCTGCGTGAAGCAACTTGCATATGCCATACTTGAATTGTCGCTCGTTTCAATTTTTCCTGAGCTGCAAGATCTTGTTCTTGATGTTCATCAGACAATGGGTGTTAATGAAACTGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0006605 GO:0006622 GO:0006623 GO:0006810 GO:0006886 GO:0007034 GO:0007041 GO:0008104 GO:0008150 GO:0008289 GO:0008333 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016482 GO:0019898 GO:0031090 GO:0031312 GO:0031313 GO:0031410 GO:0031982 GO:0033036 GO:0033365 GO:0034613 GO:0035091 GO:0042802 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045022 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061462 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098805 GO:0098927

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nexin_C PX PXA

Protein Analysis

1025

Amino Acids

115.76

Weight (kDa)

6.79

Isoelectric Point (pI)

46.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008409)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15900
fragaria_vesca	FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180
malus_domestica	MD05G1073000.v1.1 MD10G1087600.v1.1
prunus_persica	Prupe.8G113600_v2.0.a1 Prupe.8G113600_v2.0.a1
pyrus_communis	pycom05g06550 pycom10g06990
rosa_chinensis	RchiOBHm_Chr6g0259621
rosa_laevigata	RLG00000014517
rosa_multiflora	Rmu_sc0000536.1_g000017
rosa_roxburghii	Rroxscaffold_7G00206920
rosa_rugosa	Rorug05G0590000
rosa_samantha	Rh6AG106200 Rh6BG100700 Rh6CG095300 Rh6DG089200
rosa_wichuraiana	Rw6G009180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1020
Acc36I	ACCTGC	1 cut(s)	1243
AccB7I	CCANNNNNTGG	1 cut(s)	1642
AccI	GTMKAC	1 cut(s)	2951
AccII	CGCG	1 cut(s)	733
AciI	CCGC	5 cut(s)	153, 215, 694, 731, 890
AclI	AACGTT	1 cut(s)	1941
AclWI	GGATC	9 cut(s)	257, 537, 1031, 1379, 1392, 1929, 2290, 2447, 2460
AcuI	CTGAAG	3 cut(s)	579, 674, 1122
AcvI	CACGTG	1 cut(s)	1322
AfaI	GTAC	7 cut(s)	680, 918, 1233, 2067, 2187, 2499, 2912
AfiI	CCNNNNNNNGG	6 cut(s)	193, 926, 1030, 1583, 1642, 1678
AflII	CTTAAG	1 cut(s)	2534
AflIII	ACRYGT	2 cut(s)	1131, 1319
AjnI	CCWGG	2 cut(s)	820, 1029
AjuI	GAANNNNNNNTTGG	4 cut(s)	1590, 1622, 2696, 2728
AleI	CACNNNNGTG	3 cut(s)	295, 881, 2473
AloI	GAACNNNNNNTCC	6 cut(s)	298, 330, 1638, 1670, 2356, 2388
Alw21I	GWGCWC	3 cut(s)	648, 1170, 2293
Alw26I	GTCTC	4 cut(s)	234, 1319, 2171, 2922
Alw44I	GTGCAC	1 cut(s)	2289
AlwI	GGATC	9 cut(s)	257, 537, 1031, 1379, 1392, 1929, 2290, 2447, 2460
AlwNI	CAGNNNCTG	2 cut(s)	697, 2285
AoxI	GGCC	6 cut(s)	63, 281, 728, 1052, 2130, 2699
ApaLI	GTGCAC	1 cut(s)	2289
ApeKI	GCWGC	9 cut(s)	560, 1045, 1082, 1454, 2417, 2815, 2818, 2828, 3019
ArsI	GACNNNNNNTTYG	4 cut(s)	2550, 2582, 2755, 2787
Asp700I	GAANNNNTTC	1 cut(s)	1855
AspLEI	GCGC	2 cut(s)	1593, 1685
AspS9I	GGNCC	4 cut(s)	63, 281, 1356, 2700
AsuC2I	CCSGG	3 cut(s)	280, 1673, 2802
AsuHPI	GGTGA	4 cut(s)	467, 657, 905, 2258
AsuII	TTCGAA	1 cut(s)	638
AsuNHI	GCTAGC	1 cut(s)	856
AvaII	GGWCC	1 cut(s)	1356
AxyI	CCTNAGG	1 cut(s)	2271
BaeGI	GKGCMC	1 cut(s)	2293
BamHI	GGATCC	2 cut(s)	1384, 2452
BanII	GRGCYC	1 cut(s)	648
BbrPI	CACGTG	1 cut(s)	1322
BbsI	GAAGAC	3 cut(s)	67, 585, 2563
Bbv12I	GWGCWC	3 cut(s)	648, 1170, 2293
BbvCI	CCTCAGC	1 cut(s)	1407
BbvI	GCAGC	9 cut(s)	547, 1057, 1069, 1441, 2429, 2815, 2827, 2830, 3006
BccI	CCATC	9 cut(s)	657, 694, 1346, 1454, 1812, 2084, 2237, 2593, 2861
BceAI	ACGGC	1 cut(s)	1067
BciT130I	CCWGG	2 cut(s)	822, 1031
BciVI	GTATCC	1 cut(s)	2650
BclI	TGATCA	1 cut(s)	922
BcnI	CCSGG	3 cut(s)	280, 1673, 2802
BcoDI	GTCTC	4 cut(s)	234, 1319, 2171, 2922
BfaI	CTAG	4 cut(s)	857, 1239, 2513, 2841
BfmI	CTRYAG	6 cut(s)	564, 906, 1284, 1570, 1916, 2415
BfrI	CTTAAG	1 cut(s)	2534
BfuAI	ACCTGC	1 cut(s)	1243
BfuI	GTATCC	1 cut(s)	2650
BglII	AGATCT	2 cut(s)	25, 3025
Bme1390I	CCNGG	5 cut(s)	280, 822, 1031, 1673, 2802
Bme18I	GGWCC	1 cut(s)	1356
BmgT120I	GGNCC	4 cut(s)	63, 281, 1356, 2700
BmiI	GGNNCC	5 cut(s)	417, 1357, 1386, 1981, 2454
BmrFI	CCNGG	5 cut(s)	280, 822, 1031, 1673, 2802
BmsI	GCATC	6 cut(s)	322, 436, 1359, 1658, 2038, 2596
BmtI	GCTAGC	1 cut(s)	860
BoxI	GACNNNNGTC	1 cut(s)	217
BpiI	GAAGAC	3 cut(s)	67, 585, 2563
BpmI	CTGGAG	3 cut(s)	402, 1236, 2422
Bpu10I	CCTNAGC	3 cut(s)	1407, 2368, 3015
Bpu14I	TTCGAA	1 cut(s)	638
BpuEI	CTTGAG	2 cut(s)	2721, 2843
BpuMI	CCSGG	3 cut(s)	280, 1673, 2802
BsaAI	YACGTR	3 cut(s)	1322, 2189, 2345
BsaBI	GATNNNNATC	1 cut(s)	3042
BsaJI	CCNNGG	6 cut(s)	293, 820, 821, 1049, 2331, 2801
BsaXI	ACNNNNNCTCC	4 cut(s)	268, 298, 2356, 2386
Bsc4I	CCNNNNNNNGG	6 cut(s)	193, 926, 1030, 1583, 1642, 1678
Bse1I	ACTGG	5 cut(s)	749, 898, 2071, 2456, 2624
Bse21I	CCTNAGG	1 cut(s)	2271
Bse8I	GATNNNNATC	1 cut(s)	3042
BseBI	CCWGG	2 cut(s)	822, 1031
BseDI	CCNNGG	6 cut(s)	293, 820, 821, 1049, 2331, 2801
BseGI	GGATG	8 cut(s)	126, 337, 451, 649, 2050, 2062, 2248, 2611
BseJI	GATNNNNATC	1 cut(s)	3042
BseLI	CCNNNNNNNGG	6 cut(s)	193, 926, 1030, 1583, 1642, 1678
BseNI	ACTGG	5 cut(s)	749, 898, 2071, 2456, 2624
BseRI	GAGGAG	2 cut(s)	50, 614
BseSI	GKGCMC	1 cut(s)	2293
BseXI	GCAGC	9 cut(s)	547, 1057, 1069, 1441, 2429, 2815, 2827, 2830, 3006
BseYI	CCCAGC	3 cut(s)	1246, 1388, 2396
Bsh1236I	CGCG	1 cut(s)	733
Bsh1285I	CGRYCG	1 cut(s)	215
BshFI	GGCC	6 cut(s)	65, 283, 730, 1054, 2132, 2701
BsiEI	CGRYCG	1 cut(s)	215
BsiHKAI	GWGCWC	3 cut(s)	648, 1170, 2293
BsiSI	CCGG	3 cut(s)	279, 1672, 2801
BsiWI	CGTACG	1 cut(s)	2185
BslFI	GGGAC	3 cut(s)	82, 1369, 1659
BslI	CCNNNNNNNGG	6 cut(s)	193, 926, 1030, 1583, 1642, 1678
BsmAI	GTCTC	4 cut(s)	234, 1319, 2171, 2922
BsmFI	GGGAC	3 cut(s)	82, 1369, 1659
BsmI	GAATGC	3 cut(s)	1532, 2308, 2469
BsnI	GGCC	6 cut(s)	65, 283, 730, 1054, 2132, 2701
Bsp119I	TTCGAA	1 cut(s)	638
Bsp1286I	GDGCHC	3 cut(s)	648, 1170, 2293
BspACI	CCGC	5 cut(s)	153, 215, 694, 731, 890
BspANI	GGCC	6 cut(s)	65, 283, 730, 1054, 2132, 2701
BspFNI	CGCG	1 cut(s)	733
BspLI	GGNNCC	5 cut(s)	417, 1357, 1386, 1981, 2454
BspMAI	CTGCAG	3 cut(s)	910, 1920, 2419
BspMI	ACCTGC	1 cut(s)	1243
BspOI	GCTAGC	1 cut(s)	860
BspPI	GGATC	9 cut(s)	257, 537, 1031, 1379, 1392, 1929, 2290, 2447, 2460
BspQI	GCTCTTC	1 cut(s)	1593
BspT104I	TTCGAA	1 cut(s)	638
BspTI	CTTAAG	1 cut(s)	2534
BsrI	ACTGG	5 cut(s)	749, 898, 2071, 2456, 2624
BssECI	CCNNGG	6 cut(s)	293, 820, 821, 1049, 2331, 2801
BssT1I	CCWWGG	2 cut(s)	293, 2331
Bst2UI	CCWGG	2 cut(s)	822, 1031
Bst4CI	ACNGT	5 cut(s)	249, 2209, 2592, 2744, 3070
Bst6I	CTCTTC	3 cut(s)	296, 463, 1593
BstAFI	CTTAAG	1 cut(s)	2534
BstBAI	YACGTR	3 cut(s)	1322, 2189, 2345
BstBI	TTCGAA	1 cut(s)	638
BstC8I	GCNNGC	4 cut(s)	817, 858, 1056, 2549
BstDSI	CCRYGG	1 cut(s)	1049
BstEII	GGTNACC	1 cut(s)	893
BstF5I	GGATG	8 cut(s)	126, 337, 451, 649, 2050, 2062, 2248, 2611
BstFNI	CGCG	1 cut(s)	733
BstHHI	GCGC	2 cut(s)	1593, 1685
BstMAI	GTCTC	4 cut(s)	234, 1319, 2171, 2922
BstMCI	CGRYCG	1 cut(s)	215
BstMWI	GCNNNNNNNGC	6 cut(s)	1051, 1064, 1235, 1943, 2629, 2837
BstNI	CCWGG	2 cut(s)	822, 1031
BstNSI	RCATGY	1 cut(s)	1135
BstPAI	GACNNNNGTC	1 cut(s)	217
BstPI	GGTNACC	1 cut(s)	893
BstSCI	CCNGG	5 cut(s)	278, 820, 1029, 1671, 2800
BstSFI	CTRYAG	6 cut(s)	564, 906, 1284, 1570, 1916, 2415
BstSLI	GKGCMC	1 cut(s)	2293
BstUI	CGCG	1 cut(s)	733
BstV1I	GCAGC	9 cut(s)	547, 1057, 1069, 1441, 2429, 2815, 2827, 2830, 3006
BstV2I	GAAGAC	3 cut(s)	67, 585, 2563
BstX2I	RGATCY	7 cut(s)	25, 1036, 1384, 1921, 2282, 2452, 3025
BstXI	CCANNNNNNTGG	3 cut(s)	297, 2446, 2475
BstYI	RGATCY	7 cut(s)	25, 1036, 1384, 1921, 2282, 2452, 3025
Bsu36I	CCTNAGG	1 cut(s)	2271
BsuI	GTATCC	1 cut(s)	2650
BsuRI	GGCC	6 cut(s)	65, 283, 730, 1054, 2132, 2701
BtgI	CCRYGG	1 cut(s)	1049
BtgZI	GCGATG	3 cut(s)	350, 1784, 1906
BtsCI	GGATG	8 cut(s)	126, 337, 451, 649, 2050, 2062, 2248, 2611
BtsIMutI	CAGTG	3 cut(s)	756, 2022, 2214
BveI	ACCTGC	1 cut(s)	1243
Cac8I	GCNNGC	4 cut(s)	817, 858, 1056, 2549
CaiI	CAGNNNCTG	2 cut(s)	697, 2285
CfoI	GCGC	2 cut(s)	1593, 1685
Cfr13I	GGNCC	4 cut(s)	63, 281, 1356, 2700
CseI	GACGC	2 cut(s)	1883, 2638
Csp6I	GTAC	7 cut(s)	679, 917, 1232, 2066, 2186, 2498, 2911
CviAII	CATG	8 cut(s)	10, 442, 631, 926, 1132, 1274, 1955, 2151
CviQI	GTAC	7 cut(s)	679, 917, 1232, 2066, 2186, 2498, 2911
DraI	TTTAAA	1 cut(s)	363
Eam1104I	CTCTTC	3 cut(s)	296, 463, 1593
EarI	CTCTTC	3 cut(s)	296, 463, 1593
Ecl136II	GAGCTC	1 cut(s)	646
Eco130I	CCWWGG	2 cut(s)	293, 2331
Eco147I	AGGCCT	1 cut(s)	2132
Eco24I	GRGCYC	1 cut(s)	648
Eco32I	GATATC	3 cut(s)	663, 2574, 2848
Eco47I	GGWCC	1 cut(s)	1356
Eco53kI	GAGCTC	1 cut(s)	646
Eco57I	CTGAAG	3 cut(s)	579, 674, 1122
Eco72I	CACGTG	1 cut(s)	1322
Eco81I	CCTNAGG	1 cut(s)	2271
Eco91I	GGTNACC	1 cut(s)	893
EcoICRI	GAGCTC	1 cut(s)	646
EcoO65I	GGTNACC	1 cut(s)	893
EcoRI	GAATTC	2 cut(s)	182, 2673
EcoRII	CCWGG	2 cut(s)	820, 1029
EcoRV	GATATC	3 cut(s)	663, 2574, 2848
EcoT14I	CCWWGG	2 cut(s)	293, 2331
EcoT38I	GRGCYC	1 cut(s)	648
ErhI	CCWWGG	2 cut(s)	293, 2331
FaeI	CATG	8 cut(s)	13, 445, 634, 929, 1135, 1277, 1958, 2154
FaqI	GGGAC	3 cut(s)	82, 1369, 1659
FatI	CATG	8 cut(s)	9, 441, 630, 925, 1131, 1273, 1954, 2150
FauI	CCCGC	1 cut(s)	883
FauNDI	CATATG	3 cut(s)	534, 1402, 2977
FbaI	TGATCA	1 cut(s)	922
FblI	GTMKAC	1 cut(s)	2951
FokI	GGATG	8 cut(s)	133, 344, 458, 636, 2057, 2069, 2255, 2618
FriOI	GRGCYC	1 cut(s)	648
FspBI	CTAG	4 cut(s)	857, 1239, 2513, 2841
GlaI	GCGC	2 cut(s)	1592, 1684
GsaI	CCCAGC	3 cut(s)	1250, 1392, 2400
GsuI	CTGGAG	3 cut(s)	402, 1236, 2422
HaeIII	GGCC	6 cut(s)	65, 283, 730, 1054, 2132, 2701
HapII	CCGG	3 cut(s)	279, 1672, 2801
HgaI	GACGC	2 cut(s)	1883, 2638
HhaI	GCGC	2 cut(s)	1593, 1685
Hin1II	CATG	8 cut(s)	13, 445, 634, 929, 1135, 1277, 1958, 2154
Hin6I	GCGC	2 cut(s)	1591, 1683
HinP1I	GCGC	2 cut(s)	1591, 1683
HincII	GTYRAC	3 cut(s)	493, 903, 991
HindII	GTYRAC	3 cut(s)	493, 903, 991
HindIII	AAGCTT	2 cut(s)	784, 1330
HinfI	GANTC	7 cut(s)	1337, 1417, 1742, 2479, 2509, 2635, 2724
HpaII	CCGG	3 cut(s)	279, 1672, 2801
HphI	GGTGA	4 cut(s)	467, 657, 905, 2258
HpyAV	CCTTC	5 cut(s)	187, 634, 1089, 1535, 2535
HpyCH4III	ACNGT	5 cut(s)	249, 2209, 2592, 2744, 3070
HpyCH4IV	ACGT	6 cut(s)	160, 1321, 1941, 2188, 2344, 2917
HpyF10VI	GCNNNNNNNGC	6 cut(s)	1051, 1064, 1235, 1943, 2629, 2837
HpySE526I	ACGT	6 cut(s)	160, 1321, 1941, 2188, 2344, 2917
Hsp92II	CATG	8 cut(s)	13, 445, 634, 929, 1135, 1277, 1958, 2154
HspAI	GCGC	2 cut(s)	1591, 1683
Ksp22I	TGATCA	1 cut(s)	922
LguI	GCTCTTC	1 cut(s)	1593
LmnI	GCTCC	7 cut(s)	51, 421, 538, 643, 651, 1117, 2364
Lsp1109I	GCAGC	9 cut(s)	547, 1057, 1069, 1441, 2429, 2815, 2827, 2830, 3006
LweI	GCATC	6 cut(s)	322, 436, 1359, 1658, 2038, 2596
MaeI	CTAG	4 cut(s)	857, 1239, 2513, 2841
MaeII	ACGT	6 cut(s)	160, 1321, 1941, 2188, 2344, 2917
MaeIII	GTNAC	4 cut(s)	82, 893, 1735, 2264
MfeI	CAATTG	2 cut(s)	1728, 2774
MflI	RGATCY	7 cut(s)	25, 1036, 1384, 1921, 2282, 2452, 3025
MhlI	GDGCHC	3 cut(s)	648, 1170, 2293
MlyI	GAGTC	2 cut(s)	2473, 2718
MmeI	TCCRAC	4 cut(s)	820, 1537, 2440, 2900
MroXI	GAANNNNTTC	1 cut(s)	1855
MslI	CAYNNNNRTG	3 cut(s)	295, 881, 2473
MspA1I	CMGCKG	2 cut(s)	694, 1903
MspCI	CTTAAG	1 cut(s)	2534
MspI	CCGG	3 cut(s)	279, 1672, 2801
MspR9I	CCNGG	5 cut(s)	280, 822, 1031, 1673, 2802
MunI	CAATTG	2 cut(s)	1728, 2774
Mva1269I	GAATGC	3 cut(s)	1532, 2308, 2469
MvaI	CCWGG	2 cut(s)	822, 1031
MvnI	CGCG	1 cut(s)	733
MwoI	GCNNNNNNNGC	6 cut(s)	1051, 1064, 1235, 1943, 2629, 2837
NciI	CCSGG	3 cut(s)	280, 1673, 2802
NdeI	CATATG	3 cut(s)	534, 1402, 2977
NheI	GCTAGC	1 cut(s)	856
NlaIII	CATG	8 cut(s)	13, 445, 634, 929, 1135, 1277, 1958, 2154
NlaIV	GGNNCC	5 cut(s)	417, 1357, 1386, 1981, 2454
NmuCI	GTSAC	2 cut(s)	893, 2264
NspI	RCATGY	1 cut(s)	1135
NspV	TTCGAA	1 cut(s)	638
OliI	CACNNNNGTG	3 cut(s)	295, 881, 2473
PasI	CCCWGGG	1 cut(s)	821
PceI	AGGCCT	1 cut(s)	2132
PciI	ACATGT	1 cut(s)	1131
PciSI	GCTCTTC	1 cut(s)	1593
PctI	GAATGC	3 cut(s)	1532, 2308, 2469
PdmI	GAANNNNTTC	1 cut(s)	1855
PfeI	GAWTC	5 cut(s)	1337, 1417, 1742, 2509, 2635
Pfl23II	CGTACG	1 cut(s)	2185
PflMI	CCANNNNNTGG	1 cut(s)	1642
PfoI	TCCNGGA	1 cut(s)	1029
PleI	GAGTC	2 cut(s)	2473, 2718
PmaCI	CACGTG	1 cut(s)	1322
PmlI	CACGTG	1 cut(s)	1322
PpsI	GAGTC	2 cut(s)	2473, 2718
Ppu21I	YACGTR	3 cut(s)	1322, 2189, 2345
PscI	ACATGT	1 cut(s)	1131
PshAI	GACNNNNGTC	1 cut(s)	217
PsiI	TTATAA	1 cut(s)	1020
Psp124BI	GAGCTC	1 cut(s)	648
Psp1406I	AACGTT	1 cut(s)	1941
Psp6I	CCWGG	2 cut(s)	820, 1029
PspCI	CACGTG	1 cut(s)	1322
PspEI	GGTNACC	1 cut(s)	893
PspFI	CCCAGC	3 cut(s)	1246, 1388, 2396
PspGI	CCWGG	2 cut(s)	820, 1029
PspLI	CGTACG	1 cut(s)	2185
PspN4I	GGNNCC	5 cut(s)	417, 1357, 1386, 1981, 2454
PspPI	GGNCC	4 cut(s)	63, 281, 1356, 2700
PstI	CTGCAG	3 cut(s)	910, 1920, 2419
PstNI	CAGNNNCTG	2 cut(s)	697, 2285
PsuI	RGATCY	7 cut(s)	25, 1036, 1384, 1921, 2282, 2452, 3025
PvuII	CAGCTG	1 cut(s)	1903
RsaI	GTAC	7 cut(s)	680, 918, 1233, 2067, 2187, 2499, 2912
RsaNI	GTAC	7 cut(s)	679, 917, 1232, 2066, 2186, 2498, 2911
RseI	CAYNNNNRTG	3 cut(s)	295, 881, 2473
SacI	GAGCTC	1 cut(s)	648
SapI	GCTCTTC	1 cut(s)	1593
Sau96I	GGNCC	4 cut(s)	63, 281, 1356, 2700
SchI	GAGTC	2 cut(s)	2473, 2718
ScrFI	CCNGG	5 cut(s)	280, 822, 1031, 1673, 2802
SduI	GDGCHC	3 cut(s)	648, 1170, 2293
SfaNI	GCATC	6 cut(s)	322, 436, 1359, 1658, 2038, 2596
SfcI	CTRYAG	6 cut(s)	564, 906, 1284, 1570, 1916, 2415
SfuI	TTCGAA	1 cut(s)	638
SinI	GGWCC	1 cut(s)	1356
SmiMI	CAYNNNNRTG	3 cut(s)	295, 881, 2473
SmlI	CTYRAG	3 cut(s)	2534, 2736, 2822
SmoI	CTYRAG	3 cut(s)	2534, 2736, 2822
SseBI	AGGCCT	1 cut(s)	2132
SsiI	CCGC	5 cut(s)	153, 215, 694, 731, 890
SspI	AATATT	2 cut(s)	1854, 2586
SspMI	CTAG	4 cut(s)	857, 1239, 2513, 2841
SstI	GAGCTC	1 cut(s)	648
StuI	AGGCCT	1 cut(s)	2132
StyD4I	CCNGG	5 cut(s)	278, 820, 1029, 1671, 2800
StyI	CCWWGG	2 cut(s)	293, 2331
TaaI	ACNGT	5 cut(s)	249, 2209, 2592, 2744, 3070
TaiI	ACGT	6 cut(s)	163, 1324, 1944, 2191, 2347, 2920
TaqI	TCGA	4 cut(s)	33, 104, 211, 638
TatI	WGTACW	2 cut(s)	678, 2910
TauI	GCSGC	2 cut(s)	697, 733
TfiI	GAWTC	5 cut(s)	1337, 1417, 1742, 2509, 2635
TscAI	CASTG	3 cut(s)	756, 2022, 2214
TseFI	GTSAC	2 cut(s)	893, 2264
TseI	GCWGC	9 cut(s)	560, 1045, 1082, 1454, 2417, 2815, 2818, 2828, 3019
Tsp45I	GTSAC	2 cut(s)	893, 2264
TspRI	CASTG	3 cut(s)	756, 2022, 2214
Van91I	CCANNNNNTGG	1 cut(s)	1642
Vha464I	CTTAAG	1 cut(s)	2534
VneI	GTGCAC	1 cut(s)	2289
VpaK11BI	GGWCC	1 cut(s)	1356
XceI	RCATGY	1 cut(s)	1135
XcmI	CCANNNNNNNNNTGG	1 cut(s)	294
XmiI	GTMKAC	1 cut(s)	2951
XmnI	GAANNNNTTC	1 cut(s)	1855
XspI	CTAG	4 cut(s)	857, 1239, 2513, 2841

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.