Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0008409

Physical Location & Seq

Genomic Coordinates Reverse (-)

9031580 .. 9039671

Gene Structure 8092 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g06550.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2421 bp

ATGAAAACGTTGTCTTCAGAGGAGAGAGATGAAAGGTTAAAACATCATCTCATGGCTTCGAAGGAGCTCCATCCTGCATTGATTTCACCCGAGAGCGAGTACAAGGTTCTTCAGCGGCTAATGGGTGGGGTATTAGCTGTGGTGCTAAGACCACGAGAAGCACAATGTCCAGTGGTTAGATCGATTGCCAGAGAACTTCTAACAAGCTTAGTAATTCAACCTGTTTTGAATTTTGCAAGCCCTGGGTATATCAATGAATTGATTGAACACATTTTGCTAGCCATTAAAGAGGAAATCAGTAAAGTGGTAAGTGGGGACCGATCAGCTGCAGGGGTTGTACATGATCAAGATTCTTCACTGAGGAAATATGCAACCTTTAACCAAAGCACTGTTATGACATTGGCTAAAGGTGACCATCAGAGAGAAGCGTATTCAGATTATAATAAAGTCCAGGAAGATCCTTTGCAGTCACGGCCTGCTGATTGGGCACGAGTTTTAGAGGCTGCAACACAGAGAAGGACTGAAGTTCTTGCTCCTGAAAATCTTGAAAATATGTGGACAAAAGGGAGAAATTACAAAAAAAAAGAGCACACGAAAAAGATAAGAAGAGTTCAGGAACCTATATCTGAGTGTTCTGGAATAGATAGTGCTGTACCTGCTAAAAATCTGGGCAATGAAATGGTAGCCGACAGGCATGAAATTTCTACAGGAAAGGAAGATAGATCTATTGTGAAGCTGAGAAGTGAATTAAGTTTAGATACTCAATTAAGTGGTGGGACCAAAATGGAACTACACTTCTCTTTAGATCCCAGTGAAGAATCATATGCGGATCAAGGGCATCTTGTTAATAAATTGGAGGACATTGGAAACCTTGCTGCCGATGGAAATAAAAGTAGGCTTAAAAGATCAAATAGTACTTCTGCTTTGAAAATCCAGCCGGACACAAAAAGAACATTGACAGAAGGTGGAGGGTCTATCATATCAGAATTCTATAGCCCTGAGTTTGGCAGGCATAAAGAAGACCATATTAGTAAGAGTGCCTCGGATATGTTAGTCCACTGTGTGGGACAACAAGTTCCCAAGCTCAGGTGCCGGGTTATGGGAGCCTACTTTGAGAAACTTGGGTCAAAATCTTTTGCAGTTTATTCAATTGCAGTTACAGATTCGGAAAACAGAACTTGGTTTGTGAAAAGAAGATATAGGAATTTTGAACGACTGCATCGCCATCTTAAAGACATTCCAAATTACACTTTACATCTACCACCCAAAAGAATATTCTCGTCAAGCACAGAGGATGCTTTTGTTCATCAGCGATGTATTCAGCTAGACAAATATCTACAGGATCTGTTGTCAATAGCTAATGTTGCCGAACAACATGAAGTCTGGGATTTTTTAAGTGGTTCATCAAAGAATTACTCTTTTGGAAAATCTCCTTCAGTGATGAGAACTCTTGCAGTCAATGTGGATGACGCTGTGGATGACATTGTACGCCAGTTCAAAGGGGTTTCAGATGGGTTAATGCGTAAGGTTGTTGGTTCTCCCACATCCGAGGCCTCATCTTTATTTCCTGGATGGAACTTATCCGGGAATGCAGATGAGACAGGTGTCCTTGCTTTTAGCCAAAATACAGCAGAGTCAACAAATAGCTTTTCAGATAACGAGGAAGGTACCCTAGAAATTGGGTGGCATTCAGACAATGAATTGAACTATAAGGGTTATCCACCTCGGGTTGTACATACAAGGACCTTAGGTTTGGAGAAGAAAGCTGATTTAGTTGGCAAGGGTGGCTTTCTGGAGGATCCAATTGGAATGCCACCTGAGTGGACTCCACCCAATGTTAGCGTGCCTCTGTTGAATCTAGTGGACAAGGTATTTCAACTTAAGAGAAGGGGCTGGCTGAGACGACAGGTCTTTTGGATGTCAAAACAAATATTGCAGTTAATGATGGACGATGCTATTGATGACTGGCTCATGAGGCAGATTCATTGGCTTCGAAGGGAGGATATTATTGCTTCGGGAATTTATTGGCTTAAAGATGGTCTATGGCCAAATGGCACATTCTTCCTTAGAGTCGGCAATGTTCAAGACGGCAATCAAAACCCTCTTCAAAATATAAGTCAATTTGGCGGCAGCAAGGCTGGTAAACAGGGGTCTTTTGAGCACCAGCTTGAGGCTGCTCGCAGAGCTAGTGATATCAAGAAAATGCTCTTTGATGGAACTCCGGCGCCTTTGGTTAGCTTAATTGGGCATAAGCAGTACAGACGTTGTGCAAGAGACATCTATTATTTCATTCAGTCTACCACCTGCATAAAGCAACTTACTTACGCAATACTTGAACTGTCACTCGTTTCAATTTTTCCTGAGCTGCGGGATCTTATTGTTGATGTTCATCAAAAGATGGGTGTTGATCAAACTGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0006605 GO:0006622 GO:0006623 GO:0006810 GO:0006886 GO:0007034 GO:0007041 GO:0008104 GO:0008150 GO:0008289 GO:0008333 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016482 GO:0019898 GO:0031090 GO:0031312 GO:0031313 GO:0031410 GO:0031982 GO:0033036 GO:0033365 GO:0034613 GO:0035091 GO:0042802 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045022 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061462 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098805 GO:0098927

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nexin_C PX PXA

Protein Analysis

807

Amino Acids

91.08

Weight (kDa)

7.99

Isoelectric Point (pI)

50.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0008409)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15900
fragaria_vesca	FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180
malus_domestica	MD05G1073000.v1.1 MD10G1087600.v1.1
prunus_persica	Prupe.8G113600_v2.0.a1 Prupe.8G113600_v2.0.a1
pyrus_communis	pycom05g06550 pycom10g06990
rosa_chinensis	RchiOBHm_Chr6g0259621
rosa_laevigata	RLG00000014517
rosa_multiflora	Rmu_sc0000536.1_g000017
rosa_roxburghii	Rroxscaffold_7G00206920
rosa_rugosa	Rorug05G0590000
rosa_samantha	Rh6AG106200 Rh6BG100700 Rh6CG095300 Rh6DG089200
rosa_wichuraiana	Rw6G009180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	441
AarI	CACCTGC	1 cut(s)	2312
Acc36I	ACCTGC	2 cut(s)	664, 2312
Acc65I	GGTACC	1 cut(s)	1667
AccB1I	GGYRCC	3 cut(s)	1089, 1667, 2224
AccB7I	CCANNNNNTGG	1 cut(s)	1063
AccI	GTMKAC	1 cut(s)	2297
AciI	CCGC	4 cut(s)	115, 827, 2127, 2368
AclI	AACGTT	1 cut(s)	8
AclWI	GGATC	7 cut(s)	452, 800, 837, 1350, 1793, 1806, 2379
AcoI	YGGCCR	1 cut(s)	2045
AcsI	RAATTY	5 cut(s)	229, 699, 986, 1204, 2019
AcuI	CTGAAG	3 cut(s)	95, 543, 1419
AcyI	GRCGYC	1 cut(s)	2225
AdeI	CACNNNGTG	1 cut(s)	1063
AfaI	GTAC	8 cut(s)	101, 339, 654, 916, 1488, 1669, 1734, 2258
AfiI	CCNNNNNNNGG	5 cut(s)	1004, 1063, 1086, 1099, 2170
AflII	CTTAAG	1 cut(s)	1880
AhdI	GACNNNNNGTC	1 cut(s)	1907
AjnI	CCWGG	3 cut(s)	241, 450, 1567
AjuI	GAANNNNNNNTTGG	2 cut(s)	1259, 1291
AleI	CACNNNNGTG	1 cut(s)	1819
AloI	GAACNNNNNNTCC	2 cut(s)	1059, 1091
Alw21I	GWGCWC	3 cut(s)	69, 591, 2163
Alw26I	GTCTC	3 cut(s)	1592, 1894, 2268
AlwI	GGATC	7 cut(s)	452, 800, 837, 1350, 1793, 1806, 2379
AlwNI	CAGNNNCTG	1 cut(s)	1345
Ama87I	CYCGRG	2 cut(s)	89, 1725
AoxI	GGCC	3 cut(s)	473, 1551, 2045
ApeKI	GCWGC	6 cut(s)	326, 503, 875, 2130, 2174, 2365
ApoI	RAATTY	5 cut(s)	229, 699, 986, 1204, 2019
ArsI	GACNNNNNNTTYG	6 cut(s)	1735, 1767, 1896, 1928, 2101, 2133
Asp718I	GGTACC	1 cut(s)	1667
AspLEI	GCGC	1 cut(s)	2227
AspS9I	GGNCC	3 cut(s)	316, 777, 1743
AsuC2I	CCSGG	2 cut(s)	1094, 1585
AsuHPI	GGTGA	2 cut(s)	78, 422
AsuII	TTCGAA	2 cut(s)	59, 1993
AsuNHI	GCTAGC	1 cut(s)	277
AvaI	CYCGRG	2 cut(s)	89, 1725
AvaII	GGWCC	3 cut(s)	316, 777, 1743
AxyI	CCTNAGG	1 cut(s)	1747
BaeGI	GKGCMC	1 cut(s)	490
BalI	TGGCCA	1 cut(s)	2047
BamHI	GGATCC	1 cut(s)	1798
BanI	GGYRCC	3 cut(s)	1089, 1667, 2224
BanII	GRGCYC	1 cut(s)	69
BauI	CACGAG	2 cut(s)	153, 489
BbsI	GAAGAC	2 cut(s)	6, 1026
Bbv12I	GWGCWC	3 cut(s)	69, 591, 2163
BbvI	GCAGC	6 cut(s)	313, 490, 862, 2142, 2161, 2352
BceAI	ACGGC	2 cut(s)	488, 2104
BciT130I	CCWGG	3 cut(s)	243, 452, 1569
BclI	TGATCA	2 cut(s)	343, 2407
BcnI	CCSGG	2 cut(s)	1094, 1585
BcoDI	GTCTC	3 cut(s)	1592, 1894, 2268
BfaI	CTAG	5 cut(s)	278, 1325, 1673, 1859, 2187
BfmI	CTRYAG	4 cut(s)	327, 705, 991, 1337
BfoI	RGCGCY	1 cut(s)	2228
BfrI	CTTAAG	1 cut(s)	1880
BfuAI	ACCTGC	2 cut(s)	664, 2312
BglII	AGATCT	1 cut(s)	722
BisI	GCNGC	8 cut(s)	116, 327, 504, 876, 2128, 2131, 2175, 2366
BlsI	GCNGC	8 cut(s)	117, 328, 505, 877, 2129, 2132, 2176, 2367
BmcAI	AGTACT	1 cut(s)	916
Bme1390I	CCNGG	5 cut(s)	243, 452, 1094, 1569, 1585
Bme18I	GGWCC	3 cut(s)	316, 777, 1743
BmeRI	GACNNNNNGTC	1 cut(s)	1907
BmeT110I	CYCGRG	2 cut(s)	89, 1725
BmgT120I	GGNCC	3 cut(s)	316, 777, 1743
BmiI	GGNNCC	8 cut(s)	317, 618, 778, 1091, 1105, 1669, 1800, 2226
BmrFI	CCNGG	5 cut(s)	243, 452, 1094, 1569, 1585
BmrI	ACTGGG	1 cut(s)	804
BmsI	GCATC	4 cut(s)	847, 1228, 1285, 1942
BmtI	GCTAGC	1 cut(s)	281
BmuI	ACTGGG	1 cut(s)	804
BoxI	GACNNNNGTC	1 cut(s)	1604
BpiI	GAAGAC	2 cut(s)	6, 1026
BpmI	CTGGAG	1 cut(s)	1814
Bpu10I	CCTNAGC	2 cut(s)	1085, 2361
Bpu14I	TTCGAA	2 cut(s)	59, 1993
BpuEI	CTTGAG	1 cut(s)	2189
BpuMI	CCSGG	2 cut(s)	1094, 1585
Bsa29I	ATCGAT	1 cut(s)	182
BsaBI	GATNNNNATC	1 cut(s)	2388
BsaHI	GRCGYC	1 cut(s)	2225
BsaJI	CCNNGG	5 cut(s)	241, 242, 1041, 1548, 1724
Bsc4I	CCNNNNNNNGG	5 cut(s)	1004, 1063, 1086, 1099, 2170
Bse1I	ACTGG	4 cut(s)	170, 810, 1492, 1970
Bse21I	CCTNAGG	1 cut(s)	1747
Bse3DI	GCAATG	2 cut(s)	679, 2083
Bse8I	GATNNNNATC	1 cut(s)	2388
BseBI	CCWGG	3 cut(s)	243, 452, 1569
BseCI	ATCGAT	1 cut(s)	182
BseDI	CCNNGG	5 cut(s)	241, 242, 1041, 1548, 1724
BseGI	GGATG	7 cut(s)	70, 1300, 1471, 1483, 1544, 1577, 1923
BseJI	GATNNNNATC	1 cut(s)	2388
BseLI	CCNNNNNNNGG	5 cut(s)	1004, 1063, 1086, 1099, 2170
BseMI	GCAATG	2 cut(s)	679, 2083
BseMII	CTCAG	8 cut(s)	350, 618, 728, 990, 1099, 1809, 1889, 2352
BseNI	ACTGG	4 cut(s)	170, 810, 1492, 1970
BseRI	GAGGAG	1 cut(s)	35
BseSI	GKGCMC	1 cut(s)	490
BseXI	GCAGC	6 cut(s)	313, 490, 862, 2142, 2161, 2352
BshFI	GGCC	3 cut(s)	475, 1553, 2047
BshNI	GGYRCC	3 cut(s)	1089, 1667, 2224
BshVI	ATCGAT	1 cut(s)	182
BsiHKAI	GWGCWC	3 cut(s)	69, 591, 2163
BsiHKCI	CYCGRG	2 cut(s)	89, 1725
BsiSI	CCGG	4 cut(s)	938, 1093, 1584, 2222
BslFI	GGGAC	3 cut(s)	329, 790, 1080
BslI	CCNNNNNNNGG	5 cut(s)	1004, 1063, 1086, 1099, 2170
BsmAI	GTCTC	3 cut(s)	1592, 1894, 2268
BsmBI	CGTCTC	1 cut(s)	1894
BsmFI	GGGAC	3 cut(s)	329, 790, 1080
BsmI	GAATGC	3 cut(s)	1594, 1687, 1815
BsnI	GGCC	3 cut(s)	475, 1553, 2047
BsoBI	CYCGRG	2 cut(s)	89, 1725
Bsp119I	TTCGAA	2 cut(s)	59, 1993
Bsp1286I	GDGCHC	4 cut(s)	69, 490, 591, 2163
Bsp1407I	TGTACA	2 cut(s)	337, 1732
BspACI	CCGC	4 cut(s)	115, 827, 2127, 2368
BspANI	GGCC	3 cut(s)	475, 1553, 2047
BspCNI	CTCAG	8 cut(s)	351, 619, 729, 991, 1098, 1810, 1890, 2353
BspDI	ATCGAT	1 cut(s)	182
BspHI	TCATGA	1 cut(s)	1971
BspLI	GGNNCC	8 cut(s)	317, 618, 778, 1091, 1105, 1669, 1800, 2226
BspMAI	CTGCAG	1 cut(s)	331
BspMI	ACCTGC	2 cut(s)	664, 2312
BspOI	GCTAGC	1 cut(s)	281
BspPI	GGATC	7 cut(s)	452, 800, 837, 1350, 1793, 1806, 2379
BspT104I	TTCGAA	2 cut(s)	59, 1993
BspT107I	GGYRCC	3 cut(s)	1089, 1667, 2224
BspTI	CTTAAG	1 cut(s)	1880
BsrDI	GCAATG	2 cut(s)	679, 2083
BsrGI	TGTACA	2 cut(s)	337, 1732
BsrI	ACTGG	4 cut(s)	170, 810, 1492, 1970
BssECI	CCNNGG	5 cut(s)	241, 242, 1041, 1548, 1724
BssNI	GRCGYC	1 cut(s)	2225
BssSI	CACGAG	2 cut(s)	153, 489
Bst2BI	CACGAG	2 cut(s)	153, 489
Bst2UI	CCWGG	3 cut(s)	243, 452, 1569
Bst4CI	ACNGT	4 cut(s)	391, 1061, 2340, 2416
Bst6I	CTCTTC	2 cut(s)	601, 2109
BstACI	GRCGYC	1 cut(s)	2225
BstAFI	CTTAAG	1 cut(s)	1880
BstAUI	TGTACA	2 cut(s)	337, 1732
BstBI	TTCGAA	2 cut(s)	59, 1993
BstC8I	GCNNGC	7 cut(s)	238, 279, 477, 1010, 1844, 1895, 2179
BstEII	GGTNACC	1 cut(s)	410
BstF5I	GGATG	7 cut(s)	70, 1300, 1471, 1483, 1544, 1577, 1923
BstH2I	RGCGCY	1 cut(s)	2228
BstHHI	GCGC	1 cut(s)	2227
BstMAI	GTCTC	3 cut(s)	1592, 1894, 2268
BstMWI	GCNNNNNNNGC	7 cut(s)	472, 485, 656, 1364, 1785, 1975, 2183
BstNI	CCWGG	3 cut(s)	243, 452, 1569
BstPAI	GACNNNNGTC	1 cut(s)	1604
BstPI	GGTNACC	1 cut(s)	410
BstSCI	CCNGG	5 cut(s)	241, 450, 1092, 1567, 1583
BstSFI	CTRYAG	4 cut(s)	327, 705, 991, 1337
BstSLI	GKGCMC	1 cut(s)	490
BstV1I	GCAGC	6 cut(s)	313, 490, 862, 2142, 2161, 2352
BstV2I	GAAGAC	2 cut(s)	6, 1026
BstX2I	RGATCY	6 cut(s)	457, 722, 805, 1342, 1798, 2371
BstXI	CCANNNNNNTGG	1 cut(s)	1821
BstYI	RGATCY	6 cut(s)	457, 722, 805, 1342, 1798, 2371
Bsu15I	ATCGAT	1 cut(s)	182
Bsu36I	CCTNAGG	1 cut(s)	1747
BsuRI	GGCC	3 cut(s)	475, 1553, 2047
BsuTUI	ATCGAT	1 cut(s)	182
BtgZI	GCGATG	2 cut(s)	1205, 1327
BtsCI	GGATG	7 cut(s)	70, 1300, 1471, 1483, 1544, 1577, 1923
BtsIMutI	CAGTG	6 cut(s)	177, 356, 387, 817, 1057, 1443
BveI	ACCTGC	2 cut(s)	664, 2312
Cac8I	GCNNGC	7 cut(s)	238, 279, 477, 1010, 1844, 1895, 2179
CaiI	CAGNNNCTG	1 cut(s)	1345
CciI	TCATGA	1 cut(s)	1971
CfoI	GCGC	1 cut(s)	2227
Cfr13I	GGNCC	3 cut(s)	316, 777, 1743
ClaI	ATCGAT	1 cut(s)	182
CseI	GACGC	1 cut(s)	1478
Csp6I	GTAC	8 cut(s)	100, 338, 653, 915, 1487, 1668, 1733, 2257
CviAII	CATG	5 cut(s)	52, 341, 695, 1376, 1972
CviQI	GTAC	8 cut(s)	100, 338, 653, 915, 1487, 1668, 1733, 2257
DinI	GGCGCC	1 cut(s)	2226
DraIII	CACNNNGTG	1 cut(s)	1063
DriI	GACNNNNNGTC	1 cut(s)	1907
EaeI	YGGCCR	1 cut(s)	2045
Eam1104I	CTCTTC	2 cut(s)	601, 2109
Eam1105I	GACNNNNNGTC	1 cut(s)	1907
EarI	CTCTTC	2 cut(s)	601, 2109
Ecl136II	GAGCTC	1 cut(s)	67
Eco147I	AGGCCT	1 cut(s)	1553
Eco24I	GRGCYC	1 cut(s)	69
Eco32I	GATATC	1 cut(s)	2194
Eco47I	GGWCC	3 cut(s)	316, 777, 1743
Eco53kI	GAGCTC	1 cut(s)	67
Eco57I	CTGAAG	3 cut(s)	95, 543, 1419
Eco81I	CCTNAGG	1 cut(s)	1747
Eco88I	CYCGRG	2 cut(s)	89, 1725
Eco91I	GGTNACC	1 cut(s)	410
EcoICRI	GAGCTC	1 cut(s)	67
EcoO109I	RGGNCCY	1 cut(s)	1743
EcoO65I	GGTNACC	1 cut(s)	410
EcoRI	GAATTC	1 cut(s)	986
EcoRII	CCWGG	3 cut(s)	241, 450, 1567
EcoRV	GATATC	1 cut(s)	2194
EcoT38I	GRGCYC	1 cut(s)	69
EgeI	GGCGCC	1 cut(s)	2226
EheI	GGCGCC	1 cut(s)	2226
Esp3I	CGTCTC	1 cut(s)	1894
FaeI	CATG	5 cut(s)	55, 344, 698, 1379, 1975
FalI	AAGNNNNNCTT	4 cut(s)	825, 857, 1772, 1804
FaqI	GGGAC	3 cut(s)	329, 790, 1080
FatI	CATG	5 cut(s)	51, 340, 694, 1375, 1971
FauI	CCCGC	1 cut(s)	2361
FauNDI	CATATG	1 cut(s)	823
FbaI	TGATCA	2 cut(s)	343, 2407
FblI	GTMKAC	1 cut(s)	2297
Fnu4HI	GCNGC	8 cut(s)	116, 327, 504, 876, 2128, 2131, 2175, 2366
FokI	GGATG	7 cut(s)	57, 1307, 1478, 1490, 1531, 1584, 1930
FriOI	GRGCYC	1 cut(s)	69
Fsp4HI	GCNGC	8 cut(s)	116, 327, 504, 876, 2128, 2131, 2175, 2366
FspBI	CTAG	5 cut(s)	278, 1325, 1673, 1859, 2187
GlaI	GCGC	1 cut(s)	2226
GluI	GCNGC	8 cut(s)	116, 327, 504, 876, 2128, 2131, 2175, 2366
GsuI	CTGGAG	1 cut(s)	1814
HaeII	RGCGCY	1 cut(s)	2228
HaeIII	GGCC	3 cut(s)	475, 1553, 2047
HapII	CCGG	4 cut(s)	938, 1093, 1584, 2222
HgaI	GACGC	1 cut(s)	1478
HhaI	GCGC	1 cut(s)	2227
Hin1I	GRCGYC	1 cut(s)	2225
Hin1II	CATG	5 cut(s)	55, 344, 698, 1379, 1975
Hin6I	GCGC	1 cut(s)	2225
HinP1I	GCGC	1 cut(s)	2225
HincII	GTYRAC	1 cut(s)	1638
HindII	GTYRAC	1 cut(s)	1638
HindIII	AAGCTT	1 cut(s)	205
HinfI	GANTC	8 cut(s)	350, 818, 1163, 1634, 1825, 1855, 1981, 2070
HpaII	CCGG	4 cut(s)	938, 1093, 1584, 2222
HphI	GGTGA	2 cut(s)	78, 422
Hpy166II	GTNNAC	7 cut(s)	558, 1057, 1638, 1824, 1864, 2144, 2298
Hpy8I	GTNNAC	7 cut(s)	558, 1057, 1638, 1824, 1864, 2144, 2298
HpyAV	CCTTC	7 cut(s)	55, 510, 956, 1443, 1658, 1881, 1989
HpyCH4III	ACNGT	4 cut(s)	391, 1061, 2340, 2416
HpyCH4IV	ACGT	2 cut(s)	8, 2263
HpyF10VI	GCNNNNNNNGC	7 cut(s)	472, 485, 656, 1364, 1785, 1975, 2183
HpySE526I	ACGT	2 cut(s)	8, 2263
Hsp92I	GRCGYC	1 cut(s)	2225
Hsp92II	CATG	5 cut(s)	55, 344, 698, 1379, 1975
HspAI	GCGC	1 cut(s)	2225
KasI	GGCGCC	1 cut(s)	2224
KpnI	GGTACC	1 cut(s)	1671
Ksp22I	TGATCA	2 cut(s)	343, 2407
LmnI	GCTCC	4 cut(s)	64, 72, 538, 1103
Lsp1109I	GCAGC	6 cut(s)	313, 490, 862, 2142, 2161, 2352
LweI	GCATC	4 cut(s)	847, 1228, 1285, 1942
MaeI	CTAG	5 cut(s)	278, 1325, 1673, 1859, 2187
MaeII	ACGT	2 cut(s)	8, 2263
MaeIII	GTNAC	4 cut(s)	410, 468, 1156, 2340
MfeI	CAATTG	2 cut(s)	1149, 1803
MflI	RGATCY	6 cut(s)	457, 722, 805, 1342, 1798, 2371
MhlI	GDGCHC	4 cut(s)	69, 490, 591, 2163
MlsI	TGGCCA	1 cut(s)	2047
MluNI	TGGCCA	1 cut(s)	2047
Mly113I	GGCGCC	1 cut(s)	2225
MlyI	GAGTC	3 cut(s)	1643, 1819, 2079
Mox20I	TGGCCA	1 cut(s)	2047
MscI	TGGCCA	1 cut(s)	2047
MslI	CAYNNNNRTG	2 cut(s)	392, 1819
Msp20I	TGGCCA	1 cut(s)	2047
MspA1I	CMGCKG	2 cut(s)	115, 326
MspCI	CTTAAG	1 cut(s)	1880
MspI	CCGG	4 cut(s)	938, 1093, 1584, 2222
MspR9I	CCNGG	5 cut(s)	243, 452, 1094, 1569, 1585
MunI	CAATTG	2 cut(s)	1149, 1803
Mva1269I	GAATGC	3 cut(s)	1594, 1687, 1815
MvaI	CCWGG	3 cut(s)	243, 452, 1569
MwoI	GCNNNNNNNGC	7 cut(s)	472, 485, 656, 1364, 1785, 1975, 2183
NarI	GGCGCC	1 cut(s)	2225
NciI	CCSGG	2 cut(s)	1094, 1585
NdeI	CATATG	1 cut(s)	823
NheI	GCTAGC	1 cut(s)	277
NlaIII	CATG	5 cut(s)	55, 344, 698, 1379, 1975
NlaIV	GGNNCC	8 cut(s)	317, 618, 778, 1091, 1105, 1669, 1800, 2226
NmuCI	GTSAC	3 cut(s)	410, 468, 2340
NspV	TTCGAA	2 cut(s)	59, 1993
OliI	CACNNNNGTG	1 cut(s)	1819
PagI	TCATGA	1 cut(s)	1971
PaqCI	CACCTGC	1 cut(s)	2312
PasI	CCCWGGG	1 cut(s)	242
PceI	AGGCCT	1 cut(s)	1553
PctI	GAATGC	3 cut(s)	1594, 1687, 1815
PfeI	GAWTC	5 cut(s)	350, 818, 1163, 1855, 1981
PflMI	CCANNNNNTGG	1 cut(s)	1063
PfoI	TCCNGGA	3 cut(s)	450, 1567, 1583
PkrI	GCNGC	8 cut(s)	117, 328, 505, 877, 2129, 2132, 2176, 2367
PleI	GAGTC	3 cut(s)	1642, 1819, 2078
PluTI	GGCGCC	1 cut(s)	2228
PpsI	GAGTC	3 cut(s)	1642, 1819, 2078
PpuMI	RGGWCCY	1 cut(s)	1743
PshAI	GACNNNNGTC	1 cut(s)	1604
PsiI	TTATAA	1 cut(s)	441
Psp124BI	GAGCTC	1 cut(s)	69
Psp1406I	AACGTT	1 cut(s)	8
Psp5II	RGGWCCY	1 cut(s)	1743
Psp6I	CCWGG	3 cut(s)	241, 450, 1567
PspEI	GGTNACC	1 cut(s)	410
PspGI	CCWGG	3 cut(s)	241, 450, 1567
PspN4I	GGNNCC	8 cut(s)	317, 618, 778, 1091, 1105, 1669, 1800, 2226
PspPI	GGNCC	3 cut(s)	316, 777, 1743
PspPPI	RGGWCCY	1 cut(s)	1743
PstI	CTGCAG	1 cut(s)	331
PstNI	CAGNNNCTG	1 cut(s)	1345
PsuI	RGATCY	6 cut(s)	457, 722, 805, 1342, 1798, 2371
PvuII	CAGCTG	1 cut(s)	326
RsaI	GTAC	8 cut(s)	101, 339, 654, 916, 1488, 1669, 1734, 2258
RsaNI	GTAC	8 cut(s)	100, 338, 653, 915, 1487, 1668, 1733, 2257
RseI	CAYNNNNRTG	2 cut(s)	392, 1819
SacI	GAGCTC	1 cut(s)	69
SatI	GCNGC	8 cut(s)	116, 327, 504, 876, 2128, 2131, 2175, 2366
Sau96I	GGNCC	3 cut(s)	316, 777, 1743
ScaI	AGTACT	1 cut(s)	916
SchI	GAGTC	3 cut(s)	1643, 1819, 2079
ScrFI	CCNGG	5 cut(s)	243, 452, 1094, 1569, 1585
SduI	GDGCHC	4 cut(s)	69, 490, 591, 2163
SfaNI	GCATC	4 cut(s)	847, 1228, 1285, 1942
SfcI	CTRYAG	4 cut(s)	327, 705, 991, 1337
SfoI	GGCGCC	1 cut(s)	2226
SfuI	TTCGAA	2 cut(s)	59, 1993
SinI	GGWCC	3 cut(s)	316, 777, 1743
SmiMI	CAYNNNNRTG	2 cut(s)	392, 1819
SmlI	CTYRAG	2 cut(s)	1880, 2168
SmoI	CTYRAG	2 cut(s)	1880, 2168
SseBI	AGGCCT	1 cut(s)	1553
SsiI	CCGC	4 cut(s)	115, 827, 2127, 2368
SspDI	GGCGCC	1 cut(s)	2224
SspI	AATATT	2 cut(s)	1275, 1932
SspMI	CTAG	5 cut(s)	278, 1325, 1673, 1859, 2187
SstI	GAGCTC	1 cut(s)	69
StuI	AGGCCT	1 cut(s)	1553
StyD4I	CCNGG	5 cut(s)	241, 450, 1092, 1567, 1583
TaaI	ACNGT	4 cut(s)	391, 1061, 2340, 2416
TaiI	ACGT	2 cut(s)	11, 2266
TaqI	TCGA	3 cut(s)	59, 182, 1993
TaqII	GACCGA	1 cut(s)	333
TatI	WGTACW	5 cut(s)	99, 337, 914, 1732, 2256
TauI	GCSGC	2 cut(s)	118, 2130
TfiI	GAWTC	5 cut(s)	350, 818, 1163, 1855, 1981
TscAI	CASTG	6 cut(s)	177, 363, 394, 817, 1064, 1443
TseFI	GTSAC	3 cut(s)	410, 468, 2340
TseI	GCWGC	6 cut(s)	326, 503, 875, 2130, 2174, 2365
Tsp45I	GTSAC	3 cut(s)	410, 468, 2340
TspRI	CASTG	6 cut(s)	177, 363, 394, 817, 1064, 1443
Van91I	CCANNNNNTGG	1 cut(s)	1063
Vha464I	CTTAAG	1 cut(s)	1880
VpaK11BI	GGWCC	3 cut(s)	316, 777, 1743
XapI	RAATTY	5 cut(s)	229, 699, 986, 1204, 2019
XmiI	GTMKAC	1 cut(s)	2297
XspI	CTAG	5 cut(s)	278, 1325, 1673, 1859, 2187
ZrmI	AGTACT	1 cut(s)	916

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.