Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0008409

Physical Location & Seq

Genomic Coordinates Reverse (-)

8177419 .. 8187478

Gene Structure 10060 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g06990.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3024 bp

ATGAAGGCCTTGAATAGCATAGAGGATCTGATCGAGGAGATAAAGCTTCGAGTGGTTTGGTGGGCCCTGTTTGTCTTCTGTGTTACCTACTTCCTTTCCTATTCGAGTAAATCAATGTGGATGAATTTACCCTTATCAATTGTATTGGTTTCGATGTTACGTATTCTATTGAATAATGTGGAATTCCGTTGGAAGGGTCAAAAACCTGTTCGCCCACAGTCATACTTGTCTCATCTGGAGAAGAAACAGTTGTCCTTGAATGATCCACGACTTTCTACTGGGCCTCCACCACCAAAGTGGAAAAGGAAAATTGGTTCTCCAATTGTAGAGGACGCAATGAAAGATTTCATTGACAAACTTTTGAAGGATTTCGTGACTGATTTGTGGTACTCAGATATTACTCCGGACAAGGAGGCTCCAGAGCAGATACGCGCGATAATCATGGATGCTCTGGGTGAAGTTTCCAGAAGAGTTAAAGAGATAAACCTTGTTGACTTGCTAACAAGGGATATTATTGATTTAATAGGGGATCATATAGAACTTTTTAGAAGAAACCAAGCAGCTATAGGCGTTGATGTTATGAAAACGTTGTCTTCAGAGGAGAGAGATGAAAGGTTAAAACATCATCTCATGGCTTCAAAGGAGCTCCATCCTGCATTGATTTCACCTGAGAGTGAGTACAAGGTTCTTCAGCGGCTAATGGGTGGGGTATTAGCTGTGGTGCTAAGACCACGAGAAGCTCAATGTCCAGTGAAAGAGAGAGTTAGATCTATTGCCAGAGAACTTCTAACAAGCTTAGTAATTCAACCTATTTTGAATTTTGCGAGCCCTGGGTATATCAATGAATTGATAGAATATATTTTGCTAGCCGTTAAAGAGGAAATCAGTAAAGTGGTAAGTGGGGACCAGTCAGCTGCAGGGAGTGTACATGATCAAGATTCTCCGTTGAGGAAATATGCAACCTTTAATCAAAACACTGATTTGACATTGGCTGAAGTTGACAATCAGAGAGAAGTGTTTTCAGATTATAATAAATCCCCGGAAGATCCTTTGCAGCCACGGCCTGCTGACTGGGCACGAGTTTTGGAGGCTGCAACACAGAGAAGGACTGAAGTTCTTGCTCCTGAAAATCTAGAAAATATGTGGACAAAAGGGAGAAATTACAAACGTAAAGAGCACAAGAAAAAGATAAGAGGAGTTCAGGAACCTATACCTGAGTGTTCTGGAATAGATAGTGCTGTTCCTGCTAGAAATCTGGGGAAAGAAATGGTGGCTGACAGGCATGAAATTTCTACAGGAATAGAAGATAGATCTATTGTGAAGCTAAAATGTGAATTAAGTTTAGACACTCAATTAAGTACTGGGACCAAAAAGGAGATGCAGTTCTCATTGGACCCCAGTAAAGAATCATTTACTGATCCAGGGCATCTTGTTAATAAATTGGAGGACATTGGAAACCTTGCGTCTGATGGAAGTAAAAGTAGGCTTAAAAGATCAAATAGCACTTCTGCTTTGAAAATCCAACAAGACACAAAAATAGCATTGACAGAAGGTGGAGGGTCTATCATATCAGAGTTCTATAGCCCTGGGTTTGGCGGGCATAGAGAAGACCATATTAGTAAGAGTGCCTCAGATATGGTAGTCCACAGTGTGGGACAACAAGTTCCCAAGCTCAGGTGCCGGGTTATGGGAGCATACTTTGAGAAACTTGGGTCAAAATCTTTTGCAGTTTATTCAATTGCAGTTACAGATTCAGAAAACAGAACTTGGTTTGTGAAAAGAAGATATAGAAATTTTGAACGACTGCATCGCCATCTTAAAGACATTCCAAATTACACATTACATCTACCACCCAAAAGAATATTCTCGTCAAGCACAGAGGATGCTTTTGTTCATCAGCGATGTATTCAGCTAGACAAATATCTACAGGATCTATTGTCAATAGCTAATGTTGCTGAACAGCATGAAGTGTGGGATTTTTTAAGTGGTTCGTCAAAGAATTACTCGTTTGGAAAATCCCCCTCCGTGATGAGAACTCTTGCAGTCAATGTGGATGATGCTGTGGATGACATCGTACGCCAGTTCAAAGGGGTTTCAGATGGGTTAATGCGTAAGGTTGTTGGTCCCACAGCCGAGTCCTCGTCTTTAATTCCTGGATGGAACTTGTCCGCGAATGCAGATGAGACAGGTGTACTTGCTTTTAGGCAAAATACAGCAGAGTCAACAAATAGCTTTTCAGATAACGAGGAAGGTGATAAAGATAGAAGTTGTGACCCTGTAGAAAATGGGTGGCATTCAGACAATGAATTGAATTCCAAGAGCTATCCACCTCGGGTTGTACATACAAGGAGCTTAGGTTTGGAGAAAGCTTATTTAGTTGGCGAGGGTGGCTTTCTGGAGGATCCAGTTGGAATGCCACCTGAGTGGACTCCACCCAATGTTAGCGTGCCTCTGTTGAATCTAGTGGACAAGGTGTTTCAACTAAAAAAAAGGGGCTGGCTGAGAAGACAGGTCTTTTGGATGTCAAAACAAATACTGCAGTTAATGATGGAGGATGCTATTGATGACTGGCTCATGAGGCAGATTCATTGGCTTCGGAGGGAGGATGTTATTGCTTCGGGAATTTATTGGCTTAAAGATGTTCTGTGGCCCAATGGCACATTCTTCCTTAGAATCGGCAATGTTCAAGATGACAACCAAAACCCTCTTCATAATGCAAGTCAGCTTGGTGGAAGTAAGGCTGGTAAACCGGGGTCTTTTGAGCAGCAGCTTGAGGCTGCTCGTAGAGCTAGTGACATCAAGAAAATGCTCTTTGATGGAACTCCGACGGCCTTGGTCAGCTTAATTGGGCATAAGCAGTACAGACGTTGTGCAAGAGACATTTATTATTTCACTCAGTCTACTATCTGCATAAAGCAACTTGCATATGCAGTACTTGAACTGTCACTTGTTTCAATTTTCCCTGAGCTGCGGGATCTTGTTGTTGATATTCATCAAAAGATGGGTGTTGATCAAACTGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0006605 GO:0006622 GO:0006623 GO:0006810 GO:0006886 GO:0007034 GO:0007041 GO:0008104 GO:0008150 GO:0008289 GO:0008333 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016482 GO:0019898 GO:0031090 GO:0031312 GO:0031313 GO:0031410 GO:0031982 GO:0033036 GO:0033365 GO:0034613 GO:0035091 GO:0042802 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045022 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061462 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098805 GO:0098927

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nexin_C PX PXA

Protein Analysis

1008

Amino Acids

114.25

Weight (kDa)

7.11

Isoelectric Point (pI)

46.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008409)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15900
fragaria_vesca	FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180
malus_domestica	MD05G1073000.v1.1 MD10G1087600.v1.1
prunus_persica	Prupe.8G113600_v2.0.a1 Prupe.8G113600_v2.0.a1
pyrus_communis	pycom05g06550 pycom10g06990
rosa_chinensis	RchiOBHm_Chr6g0259621
rosa_laevigata	RLG00000014517
rosa_multiflora	Rmu_sc0000536.1_g000017
rosa_roxburghii	Rroxscaffold_7G00206920
rosa_rugosa	Rorug05G0590000
rosa_samantha	Rh6AG106200 Rh6BG100700 Rh6CG095300 Rh6DG089200
rosa_wichuraiana	Rw6G009180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1029
AccB1I	GGYRCC	1 cut(s)	1677
AccB7I	CCANNNNNTGG	1 cut(s)	1651
AccI	GTMKAC	1 cut(s)	2900
AccII	CGCG	3 cut(s)	432, 434, 2171
AccIII	TCCGGA	1 cut(s)	403
AciI	CCGC	4 cut(s)	694, 1596, 2169, 2971
AclI	AACGTT	1 cut(s)	587
AclWI	GGATC	9 cut(s)	33, 257, 537, 1040, 1412, 1938, 2396, 2409, 2982
AcsI	RAATTY	7 cut(s)	124, 182, 817, 1287, 1792, 2311, 2622
AcuI	CTGAAG	4 cut(s)	579, 674, 1014, 1131
AdeI	CACNNNGTG	1 cut(s)	1651
AfaI	GTAC	9 cut(s)	389, 680, 927, 1360, 2076, 2193, 2340, 2861, 2934
AfiI	CCNNNNNNNGG	5 cut(s)	193, 1592, 1651, 1674, 1687
AjnI	CCWGG	4 cut(s)	829, 1420, 1585, 2152
AjuI	GAANNNNNNNTTGG	6 cut(s)	1847, 1879, 2645, 2677, 2691, 2723
AleI	CACNNNNGTG	2 cut(s)	295, 2422
AloI	GAACNNNNNNTCC	6 cut(s)	298, 330, 1367, 1399, 1647, 1679
Alw21I	GWGCWC	2 cut(s)	648, 1179
Alw26I	GTCTC	3 cut(s)	234, 2177, 2871
AlwI	GGATC	9 cut(s)	33, 257, 537, 1040, 1412, 1938, 2396, 2409, 2982
Ama87I	CYCGRG	1 cut(s)	2331
Aor13HI	TCCGGA	1 cut(s)	403
AoxI	GGCC	6 cut(s)	6, 63, 281, 1061, 2648, 2829
ApaI	GGGCCC	1 cut(s)	67
ApeKI	GCWGC	8 cut(s)	560, 914, 1054, 1091, 2764, 2767, 2777, 2968
ApoI	RAATTY	7 cut(s)	124, 182, 817, 1287, 1792, 2311, 2622
ArsI	GACNNNNNNTTYG	2 cut(s)	2499, 2531
Asp700I	GAANNNNTTC	2 cut(s)	344, 368
AspLEI	GCGC	1 cut(s)	434
AspS9I	GGNCC	8 cut(s)	63, 64, 281, 904, 1365, 1393, 2123, 2649
AsuC2I	CCSGG	3 cut(s)	1040, 1682, 2751
AsuHPI	GGTGA	3 cut(s)	467, 657, 2264
AsuNHI	GCTAGC	1 cut(s)	865
AvaI	CYCGRG	1 cut(s)	2331
AvaII	GGWCC	4 cut(s)	904, 1365, 1393, 2123
BaeGI	GKGCMC	2 cut(s)	67, 1078
BamHI	GGATCC	1 cut(s)	2401
BanI	GGYRCC	1 cut(s)	1677
BanII	GRGCYC	3 cut(s)	67, 648, 830
BauI	CACGAG	2 cut(s)	732, 1077
BbsI	GAAGAC	4 cut(s)	67, 585, 1614, 2512
Bbv12I	GWGCWC	2 cut(s)	648, 1179
BbvI	GCAGC	8 cut(s)	572, 901, 1066, 1078, 2764, 2776, 2779, 2955
BccI	CCATC	8 cut(s)	657, 1463, 1821, 2093, 2151, 2542, 2810, 2995
BceAI	ACGGC	3 cut(s)	854, 1076, 2844
BciT130I	CCWGG	4 cut(s)	831, 1422, 1587, 2154
BclI	TGATCA	2 cut(s)	931, 3010
BcnI	CCSGG	3 cut(s)	1040, 1682, 2751
BcoDI	GTCTC	3 cut(s)	234, 2177, 2871
BfaI	CTAG	6 cut(s)	866, 1133, 1248, 1913, 2462, 2790
BfmI	CTRYAG	7 cut(s)	564, 915, 1293, 1579, 1925, 2277, 2537
BglII	AGATCT	2 cut(s)	767, 1310
BisI	GCNGC	9 cut(s)	561, 695, 915, 1055, 1092, 2765, 2768, 2778, 2969
BlsI	GCNGC	9 cut(s)	562, 696, 916, 1056, 1093, 2766, 2769, 2779, 2970
BmcAI	AGTACT	2 cut(s)	1360, 2934
Bme1390I	CCNGG	7 cut(s)	831, 1040, 1422, 1587, 1682, 2154, 2751
Bme18I	GGWCC	4 cut(s)	904, 1365, 1393, 2123
BmeT110I	CYCGRG	1 cut(s)	2331
BmgT120I	GGNCC	8 cut(s)	63, 64, 281, 904, 1365, 1393, 2123, 2649
BmiI	GGNNCC	9 cut(s)	65, 417, 905, 1206, 1366, 1395, 1679, 2125, 2403
BmrFI	CCNGG	7 cut(s)	831, 1040, 1422, 1587, 1682, 2154, 2751
BmrI	ACTGGG	4 cut(s)	288, 1081, 1371, 1392
BmsI	GCATC	7 cut(s)	436, 1368, 1435, 1816, 1873, 2047, 2545
BmtI	GCTAGC	1 cut(s)	869
BmuI	ACTGGG	4 cut(s)	288, 1081, 1371, 1392
BpiI	GAAGAC	4 cut(s)	67, 585, 1614, 2512
BpmI	CTGGAG	3 cut(s)	257, 402, 2417
Bpu10I	CCTNAGC	3 cut(s)	1673, 2353, 2964
BpuEI	CTTGAG	1 cut(s)	2792
BpuMI	CCSGG	3 cut(s)	1040, 1682, 2751
BsaAI	YACGTR	1 cut(s)	161
BsaBI	GATNNNNATC	1 cut(s)	2991
BsaWI	WCCGGW	1 cut(s)	403
BsaXI	ACNNNNNCTCC	6 cut(s)	268, 298, 1367, 1397, 2341, 2371
Bsc4I	CCNNNNNNNGG	5 cut(s)	193, 1592, 1651, 1674, 1687
Bse1I	ACTGG	9 cut(s)	283, 749, 907, 1076, 1366, 1398, 2080, 2405, 2573
Bse3DI	GCAATG	2 cut(s)	342, 2686
Bse8I	GATNNNNATC	1 cut(s)	2991
BseAI	TCCGGA	1 cut(s)	403
BseBI	CCWGG	4 cut(s)	831, 1422, 1587, 2154
BseJI	GATNNNNATC	1 cut(s)	2991
BseLI	CCNNNNNNNGG	5 cut(s)	193, 1592, 1651, 1674, 1687
BseMI	GCAATG	2 cut(s)	342, 2686
BseMII	CTCAG	9 cut(s)	405, 660, 1206, 1644, 1687, 2412, 2492, 2909, 2955
BseNI	ACTGG	9 cut(s)	283, 749, 907, 1076, 1366, 1398, 2080, 2405, 2573
BseRI	GAGGAG	3 cut(s)	50, 614, 1209
BseSI	GKGCMC	2 cut(s)	67, 1078
BseXI	GCAGC	8 cut(s)	572, 901, 1066, 1078, 2764, 2776, 2779, 2955
Bsh1236I	CGCG	3 cut(s)	432, 434, 2171
BshFI	GGCC	6 cut(s)	8, 65, 283, 1063, 2650, 2831
BshNI	GGYRCC	1 cut(s)	1677
BsiHKAI	GWGCWC	2 cut(s)	648, 1179
BsiHKCI	CYCGRG	1 cut(s)	2331
BsiSI	CCGG	4 cut(s)	404, 1040, 1681, 2750
BsiWI	CGTACG	1 cut(s)	2074
BslFI	GGGAC	4 cut(s)	917, 1378, 1668, 2109
BslI	CCNNNNNNNGG	5 cut(s)	193, 1592, 1651, 1674, 1687
BsmAI	GTCTC	3 cut(s)	234, 2177, 2871
BsmFI	GGGAC	4 cut(s)	917, 1378, 1668, 2109
BsmI	GAATGC	3 cut(s)	2179, 2293, 2418
BsnI	GGCC	6 cut(s)	8, 65, 283, 1063, 2650, 2831
BsoBI	CYCGRG	1 cut(s)	2331
Bsp120I	GGGCCC	1 cut(s)	63
Bsp1286I	GDGCHC	5 cut(s)	67, 648, 830, 1078, 1179
Bsp13I	TCCGGA	1 cut(s)	403
Bsp1407I	TGTACA	2 cut(s)	925, 2338
BspACI	CCGC	4 cut(s)	694, 1596, 2169, 2971
BspANI	GGCC	6 cut(s)	8, 65, 283, 1063, 2650, 2831
BspCNI	CTCAG	9 cut(s)	404, 661, 1207, 1643, 1686, 2413, 2493, 2908, 2956
BspEI	TCCGGA	1 cut(s)	403
BspFNI	CGCG	3 cut(s)	432, 434, 2171
BspHI	TCATGA	1 cut(s)	2574
BspLI	GGNNCC	9 cut(s)	65, 417, 905, 1206, 1366, 1395, 1679, 2125, 2403
BspMAI	CTGCAG	2 cut(s)	919, 2541
BspOI	GCTAGC	1 cut(s)	869
BspPI	GGATC	9 cut(s)	33, 257, 537, 1040, 1412, 1938, 2396, 2409, 2982
BspT107I	GGYRCC	1 cut(s)	1677
BsrDI	GCAATG	2 cut(s)	342, 2686
BsrGI	TGTACA	2 cut(s)	925, 2338
BsrI	ACTGG	9 cut(s)	283, 749, 907, 1076, 1366, 1398, 2080, 2405, 2573
BssSI	CACGAG	2 cut(s)	732, 1077
BssT1I	CCWWGG	1 cut(s)	2832
Bst2BI	CACGAG	2 cut(s)	732, 1077
Bst2UI	CCWGG	4 cut(s)	831, 1422, 1587, 2154
Bst4CI	ACNGT	5 cut(s)	219, 249, 1649, 2943, 3019
Bst6I	CTCTTC	2 cut(s)	463, 2712
BstAUI	TGTACA	2 cut(s)	925, 2338
BstBAI	YACGTR	1 cut(s)	161
BstC8I	GCNNGC	6 cut(s)	826, 867, 1065, 1598, 2447, 2498
BstDSI	CCRYGG	1 cut(s)	1058
BstFNI	CGCG	3 cut(s)	432, 434, 2171
BstHHI	GCGC	1 cut(s)	434
BstMAI	GTCTC	3 cut(s)	234, 2177, 2871
BstMWI	GCNNNNNNNGC	7 cut(s)	1060, 1073, 1244, 1952, 2388, 2578, 2786
BstNI	CCWGG	4 cut(s)	831, 1422, 1587, 2154
BstSCI	CCNGG	7 cut(s)	829, 1038, 1420, 1585, 1680, 2152, 2749
BstSFI	CTRYAG	7 cut(s)	564, 915, 1293, 1579, 1925, 2277, 2537
BstSLI	GKGCMC	2 cut(s)	67, 1078
BstSNI	TACGTA	1 cut(s)	161
BstUI	CGCG	3 cut(s)	432, 434, 2171
BstV1I	GCAGC	8 cut(s)	572, 901, 1066, 1078, 2764, 2776, 2779, 2955
BstV2I	GAAGAC	4 cut(s)	67, 585, 1614, 2512
BstX2I	RGATCY	7 cut(s)	25, 767, 1045, 1310, 1930, 2401, 2974
BstXI	CCANNNNNNTGG	2 cut(s)	297, 2424
BstYI	RGATCY	7 cut(s)	25, 767, 1045, 1310, 1930, 2401, 2974
BsuRI	GGCC	6 cut(s)	8, 65, 283, 1063, 2650, 2831
BtgI	CCRYGG	1 cut(s)	1058
BtgZI	GCGATG	2 cut(s)	1793, 1915
BtsIMutI	CAGTG	3 cut(s)	756, 975, 1654
Cac8I	GCNNGC	6 cut(s)	826, 867, 1065, 1598, 2447, 2498
CciI	TCATGA	1 cut(s)	2574
CfoI	GCGC	1 cut(s)	434
Cfr13I	GGNCC	8 cut(s)	63, 64, 281, 904, 1365, 1393, 2123, 2649
CseI	GACGC	2 cut(s)	341, 1452
Csp6I	GTAC	9 cut(s)	388, 679, 926, 1359, 2075, 2192, 2339, 2860, 2933
CviAII	CATG	6 cut(s)	442, 631, 929, 1283, 1964, 2575
CviQI	GTAC	9 cut(s)	388, 679, 926, 1359, 2075, 2192, 2339, 2860, 2933
DraIII	CACNNNGTG	1 cut(s)	1651
Eam1104I	CTCTTC	2 cut(s)	463, 2712
EarI	CTCTTC	2 cut(s)	463, 2712
Ecl136II	GAGCTC	1 cut(s)	646
Eco105I	TACGTA	1 cut(s)	161
Eco130I	CCWWGG	1 cut(s)	2832
Eco147I	AGGCCT	1 cut(s)	8
Eco24I	GRGCYC	3 cut(s)	67, 648, 830
Eco47I	GGWCC	4 cut(s)	904, 1365, 1393, 2123
Eco53kI	GAGCTC	1 cut(s)	646
Eco57I	CTGAAG	4 cut(s)	579, 674, 1014, 1131
Eco88I	CYCGRG	1 cut(s)	2331
EcoICRI	GAGCTC	1 cut(s)	646
EcoO109I	RGGNCCY	1 cut(s)	64
EcoRI	GAATTC	2 cut(s)	182, 2311
EcoRII	CCWGG	4 cut(s)	829, 1420, 1585, 2152
EcoT14I	CCWWGG	1 cut(s)	2832
EcoT38I	GRGCYC	3 cut(s)	67, 648, 830
ErhI	CCWWGG	1 cut(s)	2832
FaeI	CATG	6 cut(s)	445, 634, 932, 1286, 1967, 2578
FaqI	GGGAC	4 cut(s)	917, 1378, 1668, 2109
FatI	CATG	6 cut(s)	441, 630, 928, 1282, 1963, 2574
FauI	CCCGC	2 cut(s)	1589, 2964
FauNDI	CATATG	1 cut(s)	2926
FbaI	TGATCA	2 cut(s)	931, 3010
FblI	GTMKAC	1 cut(s)	2900
Fnu4HI	GCNGC	9 cut(s)	561, 695, 915, 1055, 1092, 2765, 2768, 2778, 2969
FriOI	GRGCYC	3 cut(s)	67, 648, 830
Fsp4HI	GCNGC	9 cut(s)	561, 695, 915, 1055, 1092, 2765, 2768, 2778, 2969
FspBI	CTAG	6 cut(s)	866, 1133, 1248, 1913, 2462, 2790
GlaI	GCGC	1 cut(s)	433
GluI	GCNGC	9 cut(s)	561, 695, 915, 1055, 1092, 2765, 2768, 2778, 2969
GsuI	CTGGAG	3 cut(s)	257, 402, 2417
HaeIII	GGCC	6 cut(s)	8, 65, 283, 1063, 2650, 2831
HapII	CCGG	4 cut(s)	404, 1040, 1681, 2750
HgaI	GACGC	2 cut(s)	341, 1452
HhaI	GCGC	1 cut(s)	434
Hin1II	CATG	6 cut(s)	445, 634, 932, 1286, 1967, 2578
Hin6I	GCGC	1 cut(s)	432
HinP1I	GCGC	1 cut(s)	432
HincII	GTYRAC	3 cut(s)	493, 1000, 2223
HindII	GTYRAC	3 cut(s)	493, 1000, 2223
HindIII	AAGCTT	3 cut(s)	44, 793, 2367
HinfI	GANTC	9 cut(s)	938, 1406, 1751, 2135, 2219, 2428, 2458, 2584, 2673
HpaII	CCGG	4 cut(s)	404, 1040, 1681, 2750
HphI	GGTGA	3 cut(s)	467, 657, 2264
Hpy99I	CGWCG	1 cut(s)	2830
HpyAV	CCTTC	5 cut(s)	187, 358, 1098, 1544, 2243
HpyCH4III	ACNGT	5 cut(s)	219, 249, 1649, 2943, 3019
HpyCH4IV	ACGT	4 cut(s)	160, 587, 1168, 2866
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1060, 1073, 1244, 1952, 2388, 2578, 2786
HpySE526I	ACGT	4 cut(s)	160, 587, 1168, 2866
Hsp92II	CATG	6 cut(s)	445, 634, 932, 1286, 1967, 2578
HspAI	GCGC	1 cut(s)	432
Kpn2I	TCCGGA	1 cut(s)	403
Ksp22I	TGATCA	2 cut(s)	931, 3010
LmnI	GCTCC	6 cut(s)	421, 643, 651, 1126, 1691, 2349
Lsp1109I	GCAGC	8 cut(s)	572, 901, 1066, 1078, 2764, 2776, 2779, 2955
LweI	GCATC	7 cut(s)	436, 1368, 1435, 1816, 1873, 2047, 2545
MaeI	CTAG	6 cut(s)	866, 1133, 1248, 1913, 2462, 2790
MaeII	ACGT	4 cut(s)	160, 587, 1168, 2866
MaeIII	GTNAC	7 cut(s)	82, 156, 373, 1744, 2270, 2792, 2943
MfeI	CAATTG	3 cut(s)	138, 321, 1737
MflI	RGATCY	7 cut(s)	25, 767, 1045, 1310, 1930, 2401, 2974
MhlI	GDGCHC	5 cut(s)	67, 648, 830, 1078, 1179
MlyI	GAGTC	3 cut(s)	2144, 2228, 2422
MmeI	TCCRAC	4 cut(s)	170, 1546, 2389, 2849
MroI	TCCGGA	1 cut(s)	403
MroXI	GAANNNNTTC	2 cut(s)	344, 368
MslI	CAYNNNNRTG	2 cut(s)	295, 2422
MspA1I	CMGCKG	2 cut(s)	694, 914
MspI	CCGG	4 cut(s)	404, 1040, 1681, 2750
MspR9I	CCNGG	7 cut(s)	831, 1040, 1422, 1587, 1682, 2154, 2751
MunI	CAATTG	3 cut(s)	138, 321, 1737
Mva1269I	GAATGC	3 cut(s)	2179, 2293, 2418
MvaI	CCWGG	4 cut(s)	831, 1422, 1587, 2154
MvnI	CGCG	3 cut(s)	432, 434, 2171
MwoI	GCNNNNNNNGC	7 cut(s)	1060, 1073, 1244, 1952, 2388, 2578, 2786
NciI	CCSGG	3 cut(s)	1040, 1682, 2751
NdeI	CATATG	1 cut(s)	2926
NheI	GCTAGC	1 cut(s)	865
NlaIII	CATG	6 cut(s)	445, 634, 932, 1286, 1967, 2578
NlaIV	GGNNCC	9 cut(s)	65, 417, 905, 1206, 1366, 1395, 1679, 2125, 2403
NmeAIII	GCCGAG	1 cut(s)	2158
NmuCI	GTSAC	4 cut(s)	373, 2270, 2792, 2943
OliI	CACNNNNGTG	2 cut(s)	295, 2422
PagI	TCATGA	1 cut(s)	2574
PasI	CCCWGGG	2 cut(s)	830, 1586
PceI	AGGCCT	1 cut(s)	8
PctI	GAATGC	3 cut(s)	2179, 2293, 2418
PdmI	GAANNNNTTC	2 cut(s)	344, 368
PfeI	GAWTC	6 cut(s)	938, 1406, 1751, 2458, 2584, 2673
Pfl23II	CGTACG	1 cut(s)	2074
PflMI	CCANNNNNTGG	1 cut(s)	1651
PfoI	TCCNGGA	1 cut(s)	2152
PkrI	GCNGC	9 cut(s)	562, 696, 916, 1056, 1093, 2766, 2769, 2779, 2970
PleI	GAGTC	3 cut(s)	2143, 2227, 2422
PpsI	GAGTC	3 cut(s)	2143, 2227, 2422
Ppu21I	YACGTR	1 cut(s)	161
PsiI	TTATAA	1 cut(s)	1029
Psp124BI	GAGCTC	1 cut(s)	648
Psp1406I	AACGTT	1 cut(s)	587
Psp6I	CCWGG	4 cut(s)	829, 1420, 1585, 2152
PspGI	CCWGG	4 cut(s)	829, 1420, 1585, 2152
PspLI	CGTACG	1 cut(s)	2074
PspN4I	GGNNCC	9 cut(s)	65, 417, 905, 1206, 1366, 1395, 1679, 2125, 2403
PspOMI	GGGCCC	1 cut(s)	63
PspPI	GGNCC	8 cut(s)	63, 64, 281, 904, 1365, 1393, 2123, 2649
PstI	CTGCAG	2 cut(s)	919, 2541
PsuI	RGATCY	7 cut(s)	25, 767, 1045, 1310, 1930, 2401, 2974
PvuII	CAGCTG	1 cut(s)	914
RsaI	GTAC	9 cut(s)	389, 680, 927, 1360, 2076, 2193, 2340, 2861, 2934
RsaNI	GTAC	9 cut(s)	388, 679, 926, 1359, 2075, 2192, 2339, 2860, 2933
RseI	CAYNNNNRTG	2 cut(s)	295, 2422
SacI	GAGCTC	1 cut(s)	648
SatI	GCNGC	9 cut(s)	561, 695, 915, 1055, 1092, 2765, 2768, 2778, 2969
Sau96I	GGNCC	8 cut(s)	63, 64, 281, 904, 1365, 1393, 2123, 2649
ScaI	AGTACT	2 cut(s)	1360, 2934
SchI	GAGTC	3 cut(s)	2144, 2228, 2422
ScrFI	CCNGG	7 cut(s)	831, 1040, 1422, 1587, 1682, 2154, 2751
SduI	GDGCHC	5 cut(s)	67, 648, 830, 1078, 1179
SfaNI	GCATC	7 cut(s)	436, 1368, 1435, 1816, 1873, 2047, 2545
SfcI	CTRYAG	7 cut(s)	564, 915, 1293, 1579, 1925, 2277, 2537
SinI	GGWCC	4 cut(s)	904, 1365, 1393, 2123
SmiMI	CAYNNNNRTG	2 cut(s)	295, 2422
SmlI	CTYRAG	1 cut(s)	2771
SmoI	CTYRAG	1 cut(s)	2771
SnaBI	TACGTA	1 cut(s)	161
SseBI	AGGCCT	1 cut(s)	8
SsiI	CCGC	4 cut(s)	694, 1596, 2169, 2971
SspI	AATATT	1 cut(s)	1863
SspMI	CTAG	6 cut(s)	866, 1133, 1248, 1913, 2462, 2790
SstI	GAGCTC	1 cut(s)	648
StuI	AGGCCT	1 cut(s)	8
StyD4I	CCNGG	7 cut(s)	829, 1038, 1420, 1585, 1680, 2152, 2749
StyI	CCWWGG	1 cut(s)	2832
TaaI	ACNGT	5 cut(s)	219, 249, 1649, 2943, 3019
TaiI	ACGT	4 cut(s)	163, 590, 1171, 2869
TaqI	TCGA	4 cut(s)	33, 49, 104, 152
TatI	WGTACW	7 cut(s)	678, 925, 1358, 2191, 2338, 2859, 2932
TauI	GCSGC	1 cut(s)	697
TfiI	GAWTC	6 cut(s)	938, 1406, 1751, 2458, 2584, 2673
TscAI	CASTG	3 cut(s)	756, 982, 1654
TseFI	GTSAC	4 cut(s)	373, 2270, 2792, 2943
TseI	GCWGC	8 cut(s)	560, 914, 1054, 1091, 2764, 2767, 2777, 2968
Tsp45I	GTSAC	4 cut(s)	373, 2270, 2792, 2943
TspGWI	ACGGA	3 cut(s)	176, 933, 2014
TspRI	CASTG	3 cut(s)	756, 982, 1654
Van91I	CCANNNNNTGG	1 cut(s)	1651
VpaK11BI	GGWCC	4 cut(s)	904, 1365, 1393, 2123
XapI	RAATTY	7 cut(s)	124, 182, 817, 1287, 1792, 2311, 2622
XbaI	TCTAGA	1 cut(s)	1132
XcmI	CCANNNNNNNNNTGG	1 cut(s)	294
XmiI	GTMKAC	1 cut(s)	2900
XmnI	GAANNNNTTC	2 cut(s)	344, 368
XspI	CTAG	6 cut(s)	866, 1133, 1248, 1913, 2462, 2790
ZrmI	AGTACT	2 cut(s)	1360, 2934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.