Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr6

Orthogroup ID

OG0008409

Physical Location & Seq

Genomic Coordinates Forward (+)

15434878 .. 15443990

Gene Structure 9113 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw6G009180.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3084 bp

ATGAAGAGGGCGATAAGGAGCGTAGAGGATCTGATCGAGGAGGTTCAGCTTCGATTCGTTTGGTGGGCGCTGTTTGTCTTCGCTGTTTCCTACTTCTTGACGCATACAAGCAAATCGATGTGGATGAATCTGCCCATAGCAATCTTACTTGTCGCGGTATTACGCATGCTATTAAATGAGGTGGAATTTCACTGGAAGGTTCATAAGCCTGTTCGTCCGAAATCATATTTGTCTCATTTGGAGAAGAAACAGTTGTCTGTGAACGACTCACGCCTTTCTACTTCACTGCCACCGCCAAAATGGAAAAGGAAAATTGGTTCTCCAATCGTAGAGGATGCAATGAGAGATTTCATTGACAAAATTTTGAAGGATTTTGTGATTGATTTATGGTATTCGGATATAACACCGGACAAGGAGGCTCCAGAGCAGATACGCGCAATTATCATGGATGCTCTTGGTGAAGTATCAGGAAGAGCTAAAGAGATAAACCTTGTTGATTTGCTAACAAGGGATATAATAGATTTAATAGCAGAACATTTAGAGCTTTTCAGAAGAAACCAAGCTGCTATAGGTGTTGATGTTATGAAAACATTGTCTTCAGAGGAGAGAGATGAAAGGTTGAAACATCATCTTATGACTTCAAAGGAGCTCCATCCTGCGTTGATATCACCTGAGAGTGAGTACAAGTTTCTTCAGCGGGTAATGGGTGGAGTGATAGCGGTGGTGCTCAGACCACGAGAAGCTCAATGTCCAGTGGTTCGATCCATTGCCAGAGAACTATTAACAAGCTTGGTAATTGAACCTGTTATGAATTTCGCAAGCCCTGGGTACATCAATGAGTTGATTGAATATGTTTTGGAAATTGTTAAAGATTATATCTTTAAAGAGGCAGATGGGGACCAGTCTACTGCAGGGGGTGTACATGATCATGATTCTCCGCTGAAATATGCTACCTTTAATCAGAGGACTGATACCTTGGCTAAAATTGAAAATCAGGGAGAAGCATCCTCGGACTATAACACATTCCAGGAAGATCCTTTGCAGTCGCAGCCTGCTGTTTGGGCACGAGGGTTGGAGGCTGCGACACAGAGAAGGACTGAAGTTCTTACTCCTGAAAATCTAGAAAACATGTGGACAAAAGGAAGAAACTATAAAAAGAAAGAACACAAGAGAAAAATAACAGGAGTTCAGGAACCTGTACCAAAGGGTTCAGGAGCGCATAGTGCTGTACCTGCAAAAAAGTTGGGGAATGAAATGCTAGCTAACAGGCATGATATTTCTACAGGAGAGGAAGATAGATCTATTGTAAATCTAACCCAGGGGGCAAGTTTTGACACCCATTTTAGTGATGCGACTAAAAAGGAGTTGCGGTTCTCTTCAGATGTCAACAAGGAATCAATTTCTAAGGAAGGGCATCTTGTTGATGAGTCGGATGACGATAGAGATCTTGCTGCTAATGGAGTTAAAAGTAGCCTTAAACGATCAAATAGCACTTCTGCTTTGAAAATCCAACCTGACGCAAAAAAAGCTTCGACACAAGGTGGAGGTTCCATCATTTCAGAGTTCTATAGTCCTGAATTTGGCAGGCATGTAGAAGGGCATATTGGTAAGAGTGCCTCAGATATGGTAGTCCGCAGTGTGGGACAAGTTCCCAAGCTCAGGTGCCGGGTTATGGGAGCATACTTTGAGAAACTTGGGTCAAAATCTTTTGCAGTTTATTCAATTGCAGTGACAGATGCAGAAAACAGAACTTGGTTTGTGAAACGAAGATATAGGAATTTTGAGCGACTACACCGCTATCTCAAAGAAATTCCAAATTACACCTTACATTTGCCCCCCAAAAGGATATTCTCATCAAGCACAGAGGATGCTTTTGTTCATCAGCGATGTATCCAGCTCGACAGATATCTCCAGGATCTTTTGTCAATAGCGAACGTTGCTGAACAGCATGAAGTTTGGGATTTTTTAAGTGCTACCTCGAAGAATTACTCATTTGGAAAATCTCCCTCAGTGATGAGAACTCTTGCAGTGAATGTGGATGATGCTGTGGACGATATTGTTCGCCAGTTCAAAGGGGTTTCAGATGGCTTAATGCGTGCCGTTGTTGGTCCATCCACTTCTGAGGGCTCATCTTCAATTCCTGTGTTGAACTTGTCCTGGAATGCCGAAGAGACAAGTGAAAATGTTTCTAGGCAAAATACAGGGGACACACTGAGTAGCTTTTCTGATAATGAGCCTGCCGAAAATGATCAAAGTTGTGACCCTGTGGAAGTCAGATCTAATGCGCAGGATAGTGGGTGGCATTCAGACAATGAATTGGACTTTAAGGGCGGACAACCTTGGATTAAACATTCGAGAAGCATAGGGTTGCAGAAGAAAGTGGTTGTGGATTCTGGGGGTGGCAATGATGTCTTTCCTAGAGCAATTGGTCCAGTAACCTTCAATCCTTTGGAACTGGAGGATCCAGTTGGAATGCCACCTGAGTGGACTCCACCCAATGTTAGTGTACCTCTGTTGAATCTAGTGGACAAGGTATTTCAGCTTAAGAGAAGGGGATGGCTAAGAAGACAAGTGTTTTGGATGTCAAAACAAATACTACAGTTGATGATGGAAGACGCTATTGATGACTGGCTCTTGAGGCATATTCAATTGCTTCGGAGGGAGGATATTATAGCTTCAGGAATTCGATGGCTTCAAGATGTTCTATGGCCCAATGGCACATTCTTCCTTAAGGTTGGTAATGCTAAAGACGATCAAAACTCTCTTCCAACTACGAACCAATTTGGTGGTAGTAAGGTTGGTAAACCAGGTTCTTTTGAGCAGCAGCTTGAGGCTGCTCGGAGAGCTAGTGATCTGAAGAAACTGCTCTTTGATGGAGCTCCAACAGCCTTAGTCAGCTTAGTCGGATATAAGCAATACAGACGTTGTGCAAGAGATATTTATTATTTCACTCAGTCTACTATATGCGTGAAGCAACTTGCATATGCAATACTTGAGTTATGTCTTGTATCAATATTCCCTGAGCTACGGGATCTTATTGTTGATATTCACGAGAAGACGCACATCGATCAAACTGTACGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005543 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005769 GO:0005770 GO:0006605 GO:0006622 GO:0006623 GO:0006810 GO:0006886 GO:0007034 GO:0007041 GO:0008104 GO:0008150 GO:0008289 GO:0008333 GO:0010008 GO:0012505 GO:0015031 GO:0015833 GO:0016020 GO:0016192 GO:0016482 GO:0019898 GO:0031090 GO:0031312 GO:0031313 GO:0031410 GO:0031982 GO:0033036 GO:0033365 GO:0034613 GO:0035091 GO:0042802 GO:0042886 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045022 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0061462 GO:0070727 GO:0071702 GO:0071705 GO:0072594 GO:0072665 GO:0072666 GO:0097708 GO:0098588 GO:0098805 GO:0098927

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Nexin_C PX PXA

Protein Analysis

1027

Amino Acids

116.19

Weight (kDa)

6.47

Isoelectric Point (pI)

46.61

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PXA	PF02194	107 - 285	4e-42	PXA domain
PX	PF00787	581 - 657	7.7e-14	PX domain
Nexin_C	PF08628	853 - 986	1.1e-23	Sorting nexin C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008409)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G15900
fragaria_vesca	FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180 FvH4_2g07180
malus_domestica	MD05G1073000.v1.1 MD10G1087600.v1.1
prunus_persica	Prupe.8G113600_v2.0.a1 Prupe.8G113600_v2.0.a1
pyrus_communis	pycom05g06550 pycom10g06990
rosa_chinensis	RchiOBHm_Chr6g0259621
rosa_laevigata	RLG00000014517
rosa_multiflora	Rmu_sc0000536.1_g000017
rosa_roxburghii	Rroxscaffold_7G00206920
rosa_rugosa	Rorug05G0590000
rosa_samantha	Rh6AG106200 Rh6BG100700 Rh6CG095300 Rh6DG089200
rosa_wichuraiana	Rw6G009180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2286
Acc36I	ACCTGC	1 cut(s)	1240
AccB1I	GGYRCC	1 cut(s)	1662
AccI	GTMKAC	2 cut(s)	905, 2957
AccII	CGCG	2 cut(s)	155, 435
AciI	CCGC	9 cut(s)	155, 293, 697, 719, 938, 1369, 1633, 1795, 2331
AclI	AACGTT	1 cut(s)	1935
AclWI	GGATC	7 cut(s)	36, 756, 1028, 1923, 2456, 2469, 3039
AcsI	RAATTY	7 cut(s)	185, 360, 811, 1577, 1777, 1809, 2682
AcuI	CTGAAG	6 cut(s)	582, 677, 1119, 1362, 2661, 2876
AdeI	CACNNNGTG	1 cut(s)	1541
AfaI	GTAC	7 cut(s)	683, 830, 921, 1200, 1230, 2508, 3078
AfiI	CCNNNNNNNGG	5 cut(s)	1580, 1639, 1659, 1672, 1842
AflII	CTTAAG	2 cut(s)	2543, 2729
AflIII	ACRYGT	1 cut(s)	1128
AjnI	CCWGG	6 cut(s)	823, 1026, 1317, 1911, 2156, 2806
AjuI	GAANNNNNNNTTGG	6 cut(s)	1587, 1619, 1832, 1864, 2705, 2737
AleI	CACNNNNGTG	1 cut(s)	2482
AloI	GAACNNNNNNTCC	4 cut(s)	301, 333, 1355, 1387
Alw21I	GWGCWC	3 cut(s)	651, 729, 2881
Alw26I	GTCTC	2 cut(s)	237, 2165
AlwI	GGATC	7 cut(s)	36, 756, 1028, 1923, 2456, 2469, 3039
AoxI	GGCC	1 cut(s)	2708
ApeKI	GCWGC	7 cut(s)	563, 1048, 1079, 1451, 2821, 2824, 2834
ApoI	RAATTY	7 cut(s)	185, 360, 811, 1577, 1777, 1809, 2682
ArsI	GACNNNNNNTTYG	2 cut(s)	2559, 2591
AspLEI	GCGC	4 cut(s)	70, 437, 1219, 2287
AspS9I	GGNCC	4 cut(s)	898, 2108, 2429, 2709
AsuC2I	CCSGG	1 cut(s)	1667
AsuHPI	GGTGA	2 cut(s)	470, 660
AsuNHI	GCTAGC	1 cut(s)	1258
AvaII	GGWCC	3 cut(s)	898, 2108, 2429
BaeGI	GKGCMC	1 cut(s)	1066
BamHI	GGATCC	1 cut(s)	2461
BanI	GGYRCC	1 cut(s)	1662
BanII	GRGCYC	3 cut(s)	651, 2129, 2881
BauI	CACGAG	3 cut(s)	735, 1065, 3050
BbsI	GAAGAC	5 cut(s)	70, 588, 2572, 2619, 3062
Bbv12I	GWGCWC	3 cut(s)	651, 729, 2881
BbvI	GCAGC	7 cut(s)	550, 1060, 1066, 1438, 2821, 2833, 2836
BccI	CCATC	9 cut(s)	660, 887, 1559, 2078, 2119, 2550, 2602, 2682, 2867
BceAI	ACGGC	1 cut(s)	2084
BciT130I	CCWGG	6 cut(s)	825, 1028, 1319, 1913, 2158, 2808
BciVI	GTATCC	1 cut(s)	1901
BclI	TGATCA	2 cut(s)	925, 2248
BcnI	CCSGG	1 cut(s)	1667
BcoDI	GTCTC	2 cut(s)	237, 2165
BfaI	CTAG	6 cut(s)	1121, 1259, 2190, 2418, 2522, 2847
BfmI	CTRYAG	5 cut(s)	567, 909, 1281, 1567, 2597
BfoI	RGCGCY	1 cut(s)	71
BfrI	CTTAAG	2 cut(s)	2543, 2729
BfuAI	ACCTGC	1 cut(s)	1240
BfuI	GTATCC	1 cut(s)	1901
BglII	AGATCT	3 cut(s)	1298, 1444, 2276
BisI	GCNGC	7 cut(s)	564, 1049, 1080, 1452, 2822, 2825, 2835
BlsI	GCNGC	7 cut(s)	565, 1050, 1081, 1453, 2823, 2826, 2836
Bme1390I	CCNGG	7 cut(s)	825, 1028, 1319, 1667, 1913, 2158, 2808
Bme18I	GGWCC	3 cut(s)	898, 2108, 2429
BmgT120I	GGNCC	4 cut(s)	898, 2108, 2429, 2709
BmiI	GGNNCC	6 cut(s)	420, 899, 1194, 1549, 1664, 2463
BmrFI	CCNGG	7 cut(s)	825, 1028, 1319, 1667, 1913, 2158, 2808
BmsI	GCATC	8 cut(s)	325, 439, 1013, 1339, 1423, 1726, 1858, 2032
BmtI	GCTAGC	1 cut(s)	1262
BpiI	GAAGAC	5 cut(s)	70, 588, 2572, 2619, 3062
BpmI	CTGGAG	3 cut(s)	405, 1895, 2477
Bpu10I	CCTNAGC	2 cut(s)	1658, 3021
BpuEI	CTTGAG	3 cut(s)	2656, 2849, 3014
BpuMI	CCSGG	1 cut(s)	1667
Bsa29I	ATCGAT	2 cut(s)	116, 3066
BsaBI	GATNNNNATC	1 cut(s)	1443
BsaJI	CCNNGG	7 cut(s)	823, 824, 975, 1008, 1317, 1318, 2339
BsaWI	WCCGGW	1 cut(s)	406
BsaXI	ACNNNNNCTCC	4 cut(s)	1355, 1385, 2833, 2863
Bsc4I	CCNNNNNNNGG	5 cut(s)	1580, 1639, 1659, 1672, 1842
Bse1I	ACTGG	8 cut(s)	197, 752, 901, 2065, 2432, 2460, 2465, 2633
Bse3DI	GCAATG	3 cut(s)	345, 765, 2410
Bse8I	GATNNNNATC	1 cut(s)	1443
BseBI	CCWGG	6 cut(s)	825, 1028, 1319, 1913, 2158, 2808
BseCI	ATCGAT	2 cut(s)	116, 3066
BseDI	CCNNGG	7 cut(s)	823, 824, 975, 1008, 1317, 1318, 2339
BseJI	GATNNNNATC	1 cut(s)	1443
BseLI	CCNNNNNNNGG	5 cut(s)	1580, 1639, 1659, 1672, 1842
BseMI	GCAATG	3 cut(s)	345, 765, 2410
BseNI	ACTGG	8 cut(s)	197, 752, 901, 2065, 2432, 2460, 2465, 2633
BseRI	GAGGAG	2 cut(s)	53, 617
BseSI	GKGCMC	1 cut(s)	1066
BseXI	GCAGC	7 cut(s)	550, 1060, 1066, 1438, 2821, 2833, 2836
Bsh1236I	CGCG	2 cut(s)	155, 435
BshFI	GGCC	1 cut(s)	2710
BshNI	GGYRCC	1 cut(s)	1662
BshVI	ATCGAT	2 cut(s)	116, 3066
BsiHKAI	GWGCWC	3 cut(s)	651, 729, 2881
BsiSI	CCGG	2 cut(s)	407, 1666
BslFI	GGGAC	3 cut(s)	911, 1656, 2219
BslI	CCNNNNNNNGG	5 cut(s)	1580, 1639, 1659, 1672, 1842
BsmAI	GTCTC	2 cut(s)	237, 2165
BsmFI	GGGAC	3 cut(s)	911, 1656, 2219
BsmI	GAATGC	3 cut(s)	2167, 2302, 2478
BsnI	GGCC	1 cut(s)	2710
Bsp1286I	GDGCHC	5 cut(s)	651, 729, 1066, 2129, 2881
Bsp1407I	TGTACA	1 cut(s)	919
BspACI	CCGC	9 cut(s)	155, 293, 697, 719, 938, 1369, 1633, 1795, 2331
BspANI	GGCC	1 cut(s)	2710
BspDI	ATCGAT	2 cut(s)	116, 3066
BspFNI	CGCG	2 cut(s)	155, 435
BspHI	TCATGA	1 cut(s)	928
BspLI	GGNNCC	6 cut(s)	420, 899, 1194, 1549, 1664, 2463
BspMAI	CTGCAG	1 cut(s)	913
BspMI	ACCTGC	1 cut(s)	1240
BspOI	GCTAGC	1 cut(s)	1262
BspPI	GGATC	7 cut(s)	36, 756, 1028, 1923, 2456, 2469, 3039
BspQI	GCTCTTC	1 cut(s)	466
BspT107I	GGYRCC	1 cut(s)	1662
BspTI	CTTAAG	2 cut(s)	2543, 2729
BsrDI	GCAATG	3 cut(s)	345, 765, 2410
BsrGI	TGTACA	1 cut(s)	919
BsrI	ACTGG	8 cut(s)	197, 752, 901, 2065, 2432, 2460, 2465, 2633
BssECI	CCNNGG	7 cut(s)	823, 824, 975, 1008, 1317, 1318, 2339
BssSI	CACGAG	3 cut(s)	735, 1065, 3050
BssT1I	CCWWGG	2 cut(s)	975, 2339
Bst2BI	CACGAG	3 cut(s)	735, 1065, 3050
Bst2UI	CCWGG	6 cut(s)	825, 1028, 1319, 1913, 2158, 2808
Bst4CI	ACNGT	4 cut(s)	252, 2601, 3076, 3081
Bst6I	CTCTTC	4 cut(s)	466, 1381, 2163, 2769
BstAFI	CTTAAG	2 cut(s)	2543, 2729
BstAUI	TGTACA	1 cut(s)	919
BstC8I	GCNNGC	7 cut(s)	167, 820, 1053, 1260, 1586, 2097, 2238
BstFNI	CGCG	2 cut(s)	155, 435
BstH2I	RGCGCY	1 cut(s)	71
BstHHI	GCGC	4 cut(s)	70, 437, 1219, 2287
BstMAI	GTCTC	2 cut(s)	237, 2165
BstMWI	GCNNNNNNNGC	9 cut(s)	1048, 1061, 1223, 1232, 1526, 1937, 2638, 2843, 2885
BstNI	CCWGG	6 cut(s)	825, 1028, 1319, 1913, 2158, 2808
BstNSI	RCATGY	3 cut(s)	169, 1132, 1592
BstSCI	CCNGG	7 cut(s)	823, 1026, 1317, 1665, 1911, 2156, 2806
BstSFI	CTRYAG	5 cut(s)	567, 909, 1281, 1567, 2597
BstSLI	GKGCMC	1 cut(s)	1066
BstUI	CGCG	2 cut(s)	155, 435
BstV1I	GCAGC	7 cut(s)	550, 1060, 1066, 1438, 2821, 2833, 2836
BstV2I	GAAGAC	5 cut(s)	70, 588, 2572, 2619, 3062
BstX2I	RGATCY	8 cut(s)	28, 1033, 1298, 1444, 1915, 2276, 2461, 3031
BstXI	CCANNNNNNTGG	2 cut(s)	2484, 2786
BstYI	RGATCY	8 cut(s)	28, 1033, 1298, 1444, 1915, 2276, 2461, 3031
Bsu15I	ATCGAT	2 cut(s)	116, 3066
BsuI	GTATCC	1 cut(s)	1901
BsuRI	GGCC	1 cut(s)	2710
BsuTUI	ATCGAT	2 cut(s)	116, 3066
BtgZI	GCGATG	1 cut(s)	1900
BtsI	GCAGTG	4 cut(s)	284, 1642, 1734, 2034
BtsIMutI	CAGTG	8 cut(s)	190, 284, 759, 1642, 1734, 2016, 2034, 2210
BveI	ACCTGC	1 cut(s)	1240
Cac8I	GCNNGC	7 cut(s)	167, 820, 1053, 1260, 1586, 2097, 2238
CciI	TCATGA	1 cut(s)	928
CfoI	GCGC	4 cut(s)	70, 437, 1219, 2287
Cfr13I	GGNCC	4 cut(s)	898, 2108, 2429, 2709
ClaI	ATCGAT	2 cut(s)	116, 3066
CseI	GACGC	4 cut(s)	109, 1526, 2624, 3067
CsiI	ACCWGGT	1 cut(s)	2806
Csp6I	GTAC	7 cut(s)	682, 829, 920, 1199, 1229, 2507, 3077
CviAII	CATG	8 cut(s)	166, 445, 923, 929, 1129, 1271, 1589, 1949
CviQI	GTAC	7 cut(s)	682, 829, 920, 1199, 1229, 2507, 3077
DraI	TTTAAA	1 cut(s)	883
DraIII	CACNNNGTG	1 cut(s)	1541
Eam1104I	CTCTTC	4 cut(s)	466, 1381, 2163, 2769
EarI	CTCTTC	4 cut(s)	466, 1381, 2163, 2769
EciI	GGCGGA	1 cut(s)	2346
Ecl136II	GAGCTC	2 cut(s)	649, 2879
Eco130I	CCWWGG	2 cut(s)	975, 2339
Eco24I	GRGCYC	3 cut(s)	651, 2129, 2881
Eco32I	GATATC	2 cut(s)	666, 1907
Eco47I	GGWCC	3 cut(s)	898, 2108, 2429
Eco53kI	GAGCTC	2 cut(s)	649, 2879
Eco57I	CTGAAG	6 cut(s)	582, 677, 1119, 1362, 2661, 2876
EcoICRI	GAGCTC	2 cut(s)	649, 2879
EcoRI	GAATTC	1 cut(s)	2682
EcoRII	CCWGG	6 cut(s)	823, 1026, 1317, 1911, 2156, 2806
EcoRV	GATATC	2 cut(s)	666, 1907
EcoT14I	CCWWGG	2 cut(s)	975, 2339
EcoT38I	GRGCYC	3 cut(s)	651, 2129, 2881
ErhI	CCWWGG	2 cut(s)	975, 2339
FaeI	CATG	8 cut(s)	169, 448, 926, 932, 1132, 1274, 1592, 1952
FalI	AAGNNNNNCTT	2 cut(s)	1401, 1433
FaqI	GGGAC	3 cut(s)	911, 1656, 2219
FatI	CATG	8 cut(s)	165, 444, 922, 928, 1128, 1270, 1588, 1948
FauI	CCCGC	1 cut(s)	690
FauNDI	CATATG	1 cut(s)	2983
FbaI	TGATCA	2 cut(s)	925, 2248
FblI	GTMKAC	2 cut(s)	905, 2957
Fnu4HI	GCNGC	7 cut(s)	564, 1049, 1080, 1452, 2822, 2825, 2835
FriOI	GRGCYC	3 cut(s)	651, 2129, 2881
Fsp4HI	GCNGC	7 cut(s)	564, 1049, 1080, 1452, 2822, 2825, 2835
FspBI	CTAG	6 cut(s)	1121, 1259, 2190, 2418, 2522, 2847
FspI	TGCGCA	1 cut(s)	2286
GlaI	GCGC	4 cut(s)	69, 436, 1218, 2286
GluI	GCNGC	7 cut(s)	564, 1049, 1080, 1452, 2822, 2825, 2835
GsuI	CTGGAG	3 cut(s)	405, 1895, 2477
HaeII	RGCGCY	1 cut(s)	71
HaeIII	GGCC	1 cut(s)	2710
HapII	CCGG	2 cut(s)	407, 1666
HgaI	GACGC	4 cut(s)	109, 1526, 2624, 3067
HhaI	GCGC	4 cut(s)	70, 437, 1219, 2287
Hin1II	CATG	8 cut(s)	169, 448, 926, 932, 1132, 1274, 1592, 1952
Hin6I	GCGC	4 cut(s)	68, 435, 1217, 2285
HinP1I	GCGC	4 cut(s)	68, 435, 1217, 2285
HincII	GTYRAC	1 cut(s)	1387
HindII	GTYRAC	1 cut(s)	1387
HindIII	AAGCTT	2 cut(s)	787, 1527
HinfI	GANTC	9 cut(s)	54, 127, 266, 932, 1394, 1427, 2390, 2488, 2518
HpaII	CCGG	2 cut(s)	407, 1666
HphI	GGTGA	2 cut(s)	470, 660
HpyAV	CCTTC	7 cut(s)	190, 361, 1086, 1403, 1589, 2449, 2544
HpyCH4III	ACNGT	4 cut(s)	252, 2601, 3076, 3081
HpyCH4IV	ACGT	2 cut(s)	1935, 2923
HpyF10VI	GCNNNNNNNGC	9 cut(s)	1048, 1061, 1223, 1232, 1526, 1937, 2638, 2843, 2885
HpySE526I	ACGT	2 cut(s)	1935, 2923
Hsp92II	CATG	8 cut(s)	169, 448, 926, 932, 1132, 1274, 1592, 1952
HspAI	GCGC	4 cut(s)	68, 435, 1217, 2285
Ksp22I	TGATCA	2 cut(s)	925, 2248
LguI	GCTCTTC	1 cut(s)	466
LmnI	GCTCC	8 cut(s)	18, 424, 646, 654, 1214, 1676, 2876, 2884
Lsp1109I	GCAGC	7 cut(s)	550, 1060, 1066, 1438, 2821, 2833, 2836
LweI	GCATC	8 cut(s)	325, 439, 1013, 1339, 1423, 1726, 1858, 2032
MabI	ACCWGGT	1 cut(s)	2806
MaeI	CTAG	6 cut(s)	1121, 1259, 2190, 2418, 2522, 2847
MaeII	ACGT	2 cut(s)	1935, 2923
MaeIII	GTNAC	3 cut(s)	1729, 2258, 2434
MfeI	CAATTG	3 cut(s)	1722, 2424, 2648
MflI	RGATCY	8 cut(s)	28, 1033, 1298, 1444, 1915, 2276, 2461, 3031
MhlI	GDGCHC	5 cut(s)	651, 729, 1066, 2129, 2881
MlyI	GAGTC	3 cut(s)	260, 1436, 2482
MmeI	TCCRAC	7 cut(s)	1053, 1410, 1534, 2449, 2792, 2884, 2906
MslI	CAYNNNNRTG	3 cut(s)	927, 1344, 2482
MspA1I	CMGCKG	2 cut(s)	697, 940
MspCI	CTTAAG	2 cut(s)	2543, 2729
MspI	CCGG	2 cut(s)	407, 1666
MspR9I	CCNGG	7 cut(s)	825, 1028, 1319, 1667, 1913, 2158, 2808
MunI	CAATTG	3 cut(s)	1722, 2424, 2648
Mva1269I	GAATGC	3 cut(s)	2167, 2302, 2478
MvaI	CCWGG	6 cut(s)	825, 1028, 1319, 1913, 2158, 2808
MvnI	CGCG	2 cut(s)	155, 435
MwoI	GCNNNNNNNGC	9 cut(s)	1048, 1061, 1223, 1232, 1526, 1937, 2638, 2843, 2885
NciI	CCSGG	1 cut(s)	1667
NdeI	CATATG	1 cut(s)	2983
NheI	GCTAGC	1 cut(s)	1258
NlaIII	CATG	8 cut(s)	169, 448, 926, 932, 1132, 1274, 1592, 1952
NlaIV	GGNNCC	6 cut(s)	420, 899, 1194, 1549, 1664, 2463
NmuCI	GTSAC	2 cut(s)	1729, 2258
NsbI	TGCGCA	1 cut(s)	2286
NspI	RCATGY	3 cut(s)	169, 1132, 1592
OliI	CACNNNNGTG	1 cut(s)	2482
PaeI	GCATGC	1 cut(s)	169
PagI	TCATGA	1 cut(s)	928
PasI	CCCWGGG	2 cut(s)	824, 1318
PciI	ACATGT	1 cut(s)	1128
PciSI	GCTCTTC	1 cut(s)	466
PctI	GAATGC	3 cut(s)	2167, 2302, 2478
PfeI	GAWTC	6 cut(s)	54, 127, 932, 1394, 2390, 2518
PfoI	TCCNGGA	3 cut(s)	1026, 1911, 2156
PkrI	GCNGC	7 cut(s)	565, 1050, 1081, 1453, 2823, 2826, 2836
PleI	GAGTC	3 cut(s)	260, 1435, 2482
PpsI	GAGTC	3 cut(s)	260, 1435, 2482
PscI	ACATGT	1 cut(s)	1128
Psp124BI	GAGCTC	2 cut(s)	651, 2881
Psp1406I	AACGTT	1 cut(s)	1935
Psp6I	CCWGG	6 cut(s)	823, 1026, 1317, 1911, 2156, 2806
PspGI	CCWGG	6 cut(s)	823, 1026, 1317, 1911, 2156, 2806
PspN4I	GGNNCC	6 cut(s)	420, 899, 1194, 1549, 1664, 2463
PspPI	GGNCC	4 cut(s)	898, 2108, 2429, 2709
PsrI	GAACNNNNNNTAC	2 cut(s)	2794, 2826
PstI	CTGCAG	1 cut(s)	913
PsuI	RGATCY	8 cut(s)	28, 1033, 1298, 1444, 1915, 2276, 2461, 3031
RsaI	GTAC	7 cut(s)	683, 830, 921, 1200, 1230, 2508, 3078
RsaNI	GTAC	7 cut(s)	682, 829, 920, 1199, 1229, 2507, 3077
RseI	CAYNNNNRTG	3 cut(s)	927, 1344, 2482
SacI	GAGCTC	2 cut(s)	651, 2881
SapI	GCTCTTC	1 cut(s)	466
SatI	GCNGC	7 cut(s)	564, 1049, 1080, 1452, 2822, 2825, 2835
Sau96I	GGNCC	4 cut(s)	898, 2108, 2429, 2709
SchI	GAGTC	3 cut(s)	260, 1436, 2482
ScrFI	CCNGG	7 cut(s)	825, 1028, 1319, 1667, 1913, 2158, 2808
SduI	GDGCHC	5 cut(s)	651, 729, 1066, 2129, 2881
SexAI	ACCWGGT	1 cut(s)	2806
SfaNI	GCATC	8 cut(s)	325, 439, 1013, 1339, 1423, 1726, 1858, 2032
SfcI	CTRYAG	5 cut(s)	567, 909, 1281, 1567, 2597
SinI	GGWCC	3 cut(s)	898, 2108, 2429
SmiMI	CAYNNNNRTG	3 cut(s)	927, 1344, 2482
SmlI	CTYRAG	5 cut(s)	2543, 2635, 2729, 2828, 2993
SmoI	CTYRAG	5 cut(s)	2543, 2635, 2729, 2828, 2993
SphI	GCATGC	1 cut(s)	169
SsiI	CCGC	9 cut(s)	155, 293, 697, 719, 938, 1369, 1633, 1795, 2331
SspI	AATATT	1 cut(s)	3015
SspMI	CTAG	6 cut(s)	1121, 1259, 2190, 2418, 2522, 2847
SstI	GAGCTC	2 cut(s)	651, 2881
StyD4I	CCNGG	7 cut(s)	823, 1026, 1317, 1665, 1911, 2156, 2806
StyI	CCWWGG	2 cut(s)	975, 2339
TaaI	ACNGT	4 cut(s)	252, 2601, 3076, 3081
TaiI	ACGT	2 cut(s)	1938, 2926
TatI	WGTACW	2 cut(s)	681, 919
TfiI	GAWTC	6 cut(s)	54, 127, 932, 1394, 2390, 2518
TscAI	CASTG	8 cut(s)	197, 291, 759, 1642, 1734, 2016, 2034, 2217
TseFI	GTSAC	2 cut(s)	1729, 2258
TseI	GCWGC	7 cut(s)	563, 1048, 1079, 1451, 2821, 2824, 2834
Tsp45I	GTSAC	2 cut(s)	1729, 2258
TspRI	CASTG	8 cut(s)	197, 291, 759, 1642, 1734, 2016, 2034, 2217
Vha464I	CTTAAG	2 cut(s)	2543, 2729
VpaK11BI	GGWCC	3 cut(s)	898, 2108, 2429
XapI	RAATTY	7 cut(s)	185, 360, 811, 1577, 1777, 1809, 2682
XbaI	TCTAGA	1 cut(s)	1120
XceI	RCATGY	3 cut(s)	169, 1132, 1592
XcmI	CCANNNNNNNNNTGG	1 cut(s)	297
XmiI	GTMKAC	2 cut(s)	905, 2957
XspI	CTAG	6 cut(s)	1121, 1259, 2190, 2418, 2522, 2847

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.