FvH4_2g08620
MYB Family

SWI SNF complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0006872
Physical Location & Seq
Forward (+)
7553606 .. 7559714
6109 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g08620.t2

Sequence Viewer

Length: 3009 bp
ATGGAAGACAAACGCGGCGACGCCGGAACTCAGCCTCCGGCTAATGCCGACTCTCCGGCCACCGAGCCCACATCTTCGCGACGCCGTGCCGGAGGCCAGAAGCGAAAGGCCAGCAGCCTCGGCGGCTCGGCCTCTTCGTCAACGCCGTCGAAACGCTTGACTCGCGAGAAGGCTTCGCTTTCTCACGCTCCGATCCACAACGGCCCGTTGACGAGGGCCCGCCAGGGGCCCAGTAGCCACTCGTCGGCCTCAGCAGCGGCGTCGAAGCCAGCTGCTCAGACGAAGCGGCCGGAGCCGACGTCTCTGGAGGCGGAGCAGGCGAAGAGGGAGAGCGAGTTGGAGGCTTTGGAGGCGGCTATGGAAGCTGAGTTTGAAGCCATTAGATCTCGCGATGCCAATGCTCATGTGGTTCCCAGTCACTGTGGTTGGTTTTCGTGGACAAAGATTCATGCCATTGAGGAGCGTATGTTGCCGTCTTTCTTTGATGGGAAGTCTGATACTCGAACTCCTGATACATACTTGGAGATACGCAATTGTATCTTGAAAAAATTCCATGCGGATCCGGGGACATTGGTTGAGCTGAAGGACATGTTGGAGCTTGAAGTTGGAGACTTTGAATCGAGACAGGAAGTTATGGAGTTTTTGGATCACTGGGGTTTGTTAAATTTCCACCCTTTCCCGCCAACAGGTTCTACTGTCGCGAGTGTCAACAGTGAGGAGGTGGCTGAAAGGGATTCTTTGGTAGATAAGTTGTATCGCTTTGAAGCACTAGAATCACGATCATCGCTGGTTCCTAAGACTAACTTAATAACTCCAACTGTGCCATCTGGGCTGTTCCCAGAGTCGACAATTGCTGAAGAGTTGGTGAGGCCTGAGGGGCCAGCTGTTGAGTACCATTGCAACTCTTGTTCAGCTGATTGCTCACGCAAACGTTACCATTGCCAGAAGCAGGCAGATTTTGATCTGTGTTCTGATTGCTTTAACAACGGGAAATTCGACTCGGGTATGTCTTCAACAGATTTCATACTTATGGAGCCTGCTGAGGCTCATGGGGTAAGTGGTGGGAACTGGACAGATCAGGAGACCCTCCTTCTCCTTGAAGCATTAGAATTATATAAAGAAGACTGGAATGAGATTGCTGACCATGTTGCTACAAAGACAAAAGCTCAATGTATATTGCACTTTGTTCAAATGCCAATCGAGGATACCTTCCTAGACCATGATGATGACCTTGATGCCAGTGCCAAAGATACTGCAAATCCAACTTCAACTAACAATGAAACATTGCCCCCGAAAGATACCCCTGGAACAACAGAGAATAAGACAAGTGCTAATGAGAGTGACCCTCAAACTTCCCCGATGGAAATTTCAAAAGAAGCAAGTGAGTCAAAAGATGGGGAGGATACTTCCAAGCCAAAAGATGAAAATGAAGTCAAAGTTGGTCAGGAAACCTCAAACTTGGAAGACACTGGTGATTTGAAACTTGATCAGGAAACAGATGAGAACCTTGCACTGAAGGCTCTGAAGGAAGCCTTTGAAGTTGTTGGTTATCCTCAAACACCTGAAAGTCAACTCTCATTTGCAGATGTGGGAAACCCTGCCATGGCATTGGCCGCATTCCTGGCACGGTTGGTGGGACCTGATCATGCTATTGCTTCAGCACATAACTCTTTAAAGTCTATAACTGCAGATGCTCCTGGCATTGAGTTGGCTTCGAGGCACTGCTTTATTTTAGAAGATCCACCAACTGACAGAGAGGAACAGGCTGGTCGTGATAGTGTTGCTGCAGAAAGGGAAGCTCAGAGTGACAAAGTCAATCAAGAAGATAGTCATAAAGAGGATAACTCCACCTCTGGTTTGGAAGATAGAGGTGTATCAAATGATAATGACAAGAAACTTGAAGAAGTTACTCCTGAAGAAAAGTCACAATCTGCAAAAGAACAAGATGACAGGATTTCTCATGAGGAAGTAGGAACTGATAAACGAAACAAATCAAACAACTCAGAGTTACCAAATGACCAACCACCTACTTTGGGGGAGTCAGATGACTCAAAACTTGAGGCACCACCAAGTTCAACAAAGGAGTCGGGAGAGGGAACTTCAGTAGGAAAGCCTTCTGAAACCACAGACACGCCAATGGATGTGGATGTGTCTGTCTCCATTCCCTCAACGAAGACAGAGCCTCAGCAACAAGTTGCATCAAATTCAGCTGAGCAACCTTCTCAGTCTACAGAGACAACAAAAGAAGTGGATGTATCTAATGACCTGGCTTTAGACAGTGATGAGCCTCCACCACCAGTTACTGTCAAATCAGGAGAAGCCCCTCAACCTACTGAAACCTCAAAGGATGTAGATATGGTGTGTGATACTGAGCCCCCACAAGAGAATGAGCCTCCCCAACCAGTTGAAAACACTACAAGTGAGGATCAAACTGATGATAGTAAACACGAGAAGCATGACTGCACAGAACCGAAAAATGATAAAAAGCAAGAGATGAAAGGCGAACAGAAAATTGATAAAGTAAAGCAAGCTGCGGTTTCTGCAGTCTCAGCAGCTGCAGTGAAGGCAAAACTTCTAGCAGAACAGGAAGAAGATCAAATCCGACAGCTTGCAGCCATGTTGATAGAGAAGCAGTTGCATAAGTTGGAAGCCAAGTTAGGTTTCTTTAATGAGATGGAAAGTGTTGTGATGAGGGTAAAAGAGCAATTGGACAGGTCAAGACAGAAGCTCTACCATGAACGGGCACAGATTATTGCTGCCCGACTTGGCTTACCAGGTTCCTCATCTAGAGGAATGCCATCTGCAATGCCTACAAATAGAATGGCCACAAATGTTACAAACGCAGTTCCAAGGCCCCCACTTATGATGGCCTCACAAAGGCCACCCATGTCGAGACCCATGGGAGCAGTGCCTCCAACCCCTTTAAACCAATTTTCATCCACAACTTTGTCAGGAAGTCCAATTCGGCCTCCCAGTCAGGACAGCCTTTCTTCTATGGGGGCAAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Myb_DNA-binding SWIRM SWIRM-assoc_1 ZZ

Protein Analysis

1003

Amino Acids

109.18

Weight (kDa)

4.74

Isoelectric Point (pI)

51.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SWIRM PF04433 145 - 223 1.5e-19 SWIRM domain
ZZ PF00569 297 - 332 1e-08 Zinc finger, ZZ type
Myb_DNA-binding PF00249 355 - 397 8e-12 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 357 - 397 1.8e-06 Myb-like DNA-binding domain
SWIRM-assoc_1 PF16495 847 - 879 3.9e-06 SWIRM-associated region 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 302
AccB1I GGYRCC 1 cut(s) 2062
AccI GTMKAC 2 cut(s) 845, 2228
AccII CGCG 5 cut(s) 15, 79, 165, 390, 701
AclI AACGTT 1 cut(s) 931
AclWI GGATC 6 cut(s) 187, 554, 567, 654, 1733, 2433
AcoI YGGCCR 4 cut(s) 57, 287, 1611, 2823
AcsI RAATTY 5 cut(s) 548, 664, 992, 1365, 2203
AcuI CTGAAG 7 cut(s) 602, 876, 1535, 1544, 1641, 1935, 2085
AcyI GRCGYC 4 cut(s) 21, 82, 260, 299
AfaI GTAC 1 cut(s) 893
AfiI CCNNNNNNNGG 8 cut(s) 225, 244, 686, 949, 1603, 2033, 2740, 2877
AflIII ACRYGT 1 cut(s) 588
AjnI CCWGG 6 cut(s) 222, 1303, 1620, 1696, 2265, 2773
AjuI GAANNNNNNNTTGG 6 cut(s) 575, 607, 1422, 1454, 2645, 2677
AloI GAACNNNNNNTCC 2 cut(s) 19, 51
Alw26I GTCTC 8 cut(s) 306, 603, 616, 1076, 2161, 2228, 2551, 2887
AlwI GGATC 6 cut(s) 187, 554, 567, 654, 1733, 2433
AlwNI CAGNNNCTG 3 cut(s) 420, 2303, 2555
Ama87I CYCGRG 1 cut(s) 1000
ApaI GGGCCC 2 cut(s) 220, 231
ApeKI GCWGC 9 cut(s) 114, 254, 272, 1784, 2531, 2552, 2555, 2612, 2756
ApoI RAATTY 5 cut(s) 548, 664, 992, 1365, 2203
Asp700I GAANNNNTTC 2 cut(s) 548, 2113
AspS9I GGNCC 8 cut(s) 203, 216, 217, 227, 228, 878, 1637, 2853
AsuC2I CCSGG 1 cut(s) 564
AsuHPI GGTGA 2 cut(s) 877, 1484
AvaI CYCGRG 1 cut(s) 1000
AvaII GGWCC 1 cut(s) 1637
AxyI CCTNAGG 1 cut(s) 873
BaeGI GKGCMC 3 cut(s) 220, 231, 2746
BalI TGGCCA 1 cut(s) 2825
BamHI GGATCC 1 cut(s) 559
BanI GGYRCC 1 cut(s) 2062
BanII GRGCYC 4 cut(s) 69, 220, 231, 2376
BauI CACGAG 1 cut(s) 2447
BbsI GAAGAC 5 cut(s) 12, 1002, 1128, 1470, 2180
BbvCI CCTCAGC 3 cut(s) 250, 1041, 2184
BbvI GCAGC 9 cut(s) 126, 259, 266, 1771, 2518, 2542, 2564, 2624, 2743
BccI CCATC 7 cut(s) 479, 832, 1354, 1388, 2668, 2806, 2860
BceAI ACGGC 4 cut(s) 69, 130, 217, 457
BcgI CGANNNNNNTGC 4 cut(s) 243, 277, 380, 414
BciT130I CCWGG 6 cut(s) 224, 1305, 1622, 1698, 2267, 2775
BciVI GTATCC 2 cut(s) 1198, 1396
BclI TGATCA 2 cut(s) 1486, 1642
BcnI CCSGG 1 cut(s) 564
BcoDI GTCTC 8 cut(s) 306, 603, 616, 1076, 2161, 2228, 2551, 2887
BfaI CTAG 4 cut(s) 770, 1214, 2576, 2787
BfmI CTRYAG 5 cut(s) 1686, 1785, 2229, 2541, 2556
BfuI GTATCC 2 cut(s) 1198, 1396
BglI GCCNNNNNGGC 3 cut(s) 123, 829, 877
BglII AGATCT 1 cut(s) 383
BlpI GCTNAGC 1 cut(s) 2211
Bme1390I CCNGG 7 cut(s) 224, 564, 1305, 1622, 1698, 2267, 2775
Bme18I GGWCC 1 cut(s) 1637
BmeT110I CYCGRG 1 cut(s) 1000
BmgT120I GGNCC 8 cut(s) 203, 216, 217, 227, 228, 878, 1637, 2853
BmrFI CCNGG 7 cut(s) 224, 564, 1305, 1622, 1698, 2267, 2775
BmrI ACTGGG 4 cut(s) 225, 408, 661, 2967
BmsI GCATC 4 cut(s) 382, 1225, 1681, 2207
BmuI ACTGGG 4 cut(s) 225, 408, 661, 2967
BpiI GAAGAC 5 cut(s) 12, 1002, 1128, 1470, 2180
BplI GAGNNNNNCTC 4 cut(s) 1330, 1362, 1829, 1861
BpmI CTGGAG 1 cut(s) 326
Bpu10I CCTNAGC 3 cut(s) 250, 1041, 2184
Bpu1102I GCTNAGC 1 cut(s) 2211
BpuEI CTTGAG 1 cut(s) 2078
BpuMI CCSGG 1 cut(s) 564
BsaBI GATNNNNATC 1 cut(s) 960
BsaHI GRCGYC 4 cut(s) 21, 82, 260, 299
BsaI GGTCTC 2 cut(s) 1076, 2887
BsaJI CCNNGG 7 cut(s) 118, 223, 563, 1303, 1602, 2849, 2898
Bsc4I CCNNNNNNNGG 8 cut(s) 225, 244, 686, 949, 1603, 2033, 2740, 2877
Bse21I CCTNAGG 1 cut(s) 873
Bse3DI GCAATG 4 cut(s) 895, 937, 1283, 2811
Bse8I GATNNNNATC 1 cut(s) 960
BseBI CCWGG 6 cut(s) 224, 1305, 1622, 1698, 2267, 2775
BseDI CCNNGG 7 cut(s) 118, 223, 563, 1303, 1602, 2849, 2898
BseGI GGATG 5 cut(s) 2146, 2152, 2257, 2353, 2936
BseJI GATNNNNATC 1 cut(s) 960
BseLI CCNNNNNNNGG 8 cut(s) 225, 244, 686, 949, 1603, 2033, 2740, 2877
BseMI GCAATG 4 cut(s) 895, 937, 1283, 2811
BseRI GAGGAG 2 cut(s) 473, 731
BseSI GKGCMC 3 cut(s) 220, 231, 2746
BseX3I CGGCCG 1 cut(s) 287
BseXI GCAGC 9 cut(s) 126, 259, 266, 1771, 2518, 2542, 2564, 2624, 2743
BsgI GTGCAG 1 cut(s) 2446
Bsh1236I CGCG 5 cut(s) 15, 79, 165, 390, 701
Bsh1285I CGRYCG 1 cut(s) 290
BshNI GGYRCC 1 cut(s) 2062
BsiEI CGRYCG 1 cut(s) 290
BsiHKCI CYCGRG 1 cut(s) 1000
BsiSI CCGG 6 cut(s) 24, 38, 56, 90, 290, 563
BslFI GGGAC 2 cut(s) 580, 1650
BslI CCNNNNNNNGG 8 cut(s) 225, 244, 686, 949, 1603, 2033, 2740, 2877
BsmAI GTCTC 8 cut(s) 306, 603, 616, 1076, 2161, 2228, 2551, 2887
BsmBI CGTCTC 1 cut(s) 306
BsmFI GGGAC 2 cut(s) 580, 1650
BsmI GAATGC 2 cut(s) 1616, 2799
Bso31I GGTCTC 2 cut(s) 1076, 2887
BsoBI CYCGRG 1 cut(s) 1000
Bsp120I GGGCCC 2 cut(s) 216, 227
Bsp1286I GDGCHC 5 cut(s) 69, 220, 231, 2376, 2746
Bsp1720I GCTNAGC 1 cut(s) 2211
Bsp19I CCATGG 2 cut(s) 1602, 2898
Bsp68I TCGCGA 4 cut(s) 79, 165, 390, 701
BspFNI CGCG 5 cut(s) 15, 79, 165, 390, 701
BspHI TCATGA 1 cut(s) 1960
BspMAI CTGCAG 4 cut(s) 1690, 1789, 2545, 2560
BspPI GGATC 6 cut(s) 187, 554, 567, 654, 1733, 2433
BspT107I GGYRCC 1 cut(s) 2062
BspTNI GGTCTC 2 cut(s) 1076, 2887
BsrDI GCAATG 4 cut(s) 895, 937, 1283, 2811
BssECI CCNNGG 7 cut(s) 118, 223, 563, 1303, 1602, 2849, 2898
BssNI GRCGYC 4 cut(s) 21, 82, 260, 299
BssSI CACGAG 1 cut(s) 2447
BssT1I CCWWGG 3 cut(s) 1602, 2849, 2898
Bst2BI CACGAG 1 cut(s) 2447
Bst2UI CCWGG 6 cut(s) 224, 1305, 1622, 1698, 2267, 2775
Bst4CI ACNGT 7 cut(s) 422, 697, 713, 820, 1629, 2279, 2305
Bst6I CTCTTC 3 cut(s) 139, 317, 852
BstACI GRCGYC 4 cut(s) 21, 82, 260, 299
BstC8I GCNNGC 9 cut(s) 112, 220, 270, 318, 882, 951, 1038, 2529, 2610
BstDSI CCRYGG 2 cut(s) 1602, 2898
BstENI CCTNNNNNAGG 1 cut(s) 2875
BstF5I GGATG 5 cut(s) 2146, 2152, 2257, 2353, 2936
BstFNI CGCG 5 cut(s) 15, 79, 165, 390, 701
BstMAI GTCTC 8 cut(s) 306, 603, 616, 1076, 2161, 2228, 2551, 2887
BstMCI CGRYCG 1 cut(s) 290
BstNI CCWGG 6 cut(s) 224, 1305, 1622, 1698, 2267, 2775
BstNSI RCATGY 1 cut(s) 592
BstSCI CCNGG 7 cut(s) 222, 562, 1303, 1620, 1696, 2265, 2773
BstSFI CTRYAG 5 cut(s) 1686, 1785, 2229, 2541, 2556
BstSLI GKGCMC 3 cut(s) 220, 231, 2746
BstUI CGCG 5 cut(s) 15, 79, 165, 390, 701
BstV1I GCAGC 9 cut(s) 126, 259, 266, 1771, 2518, 2542, 2564, 2624, 2743
BstV2I GAAGAC 5 cut(s) 12, 1002, 1128, 1470, 2180
BstX2I RGATCY 3 cut(s) 383, 559, 1738
BstXI CCANNNNNNTGG 1 cut(s) 1609
BstYI RGATCY 3 cut(s) 383, 559, 1738
BstZI CGGCCG 1 cut(s) 287
Bsu36I CCTNAGG 1 cut(s) 873
BsuI GTATCC 2 cut(s) 1198, 1396
BtgI CCRYGG 2 cut(s) 1602, 2898
BtgZI GCGATG 2 cut(s) 405, 768
BtsCI GGATG 5 cut(s) 2146, 2152, 2257, 2353, 2936
BtsI GCAGTG 3 cut(s) 1720, 2565, 2913
BtuMI TCGCGA 4 cut(s) 79, 165, 390, 701
Cac8I GCNNGC 9 cut(s) 112, 220, 270, 318, 882, 951, 1038, 2529, 2610
CaiI CAGNNNCTG 3 cut(s) 420, 2303, 2555
CciI TCATGA 1 cut(s) 1960
Cfr13I GGNCC 8 cut(s) 203, 216, 217, 227, 228, 878, 1637, 2853
CseI GACGC 3 cut(s) 29, 90, 249
CsiI ACCWGGT 1 cut(s) 2773
Csp6I GTAC 1 cut(s) 892
CspCI CAANNNNNGTGG 6 cut(s) 2013, 2048, 2124, 2159, 2229, 2264
CviQI GTAC 1 cut(s) 892
DraI TTTAAA 2 cut(s) 1674, 2925
EaeI YGGCCR 4 cut(s) 57, 287, 1611, 2823
EagI CGGCCG 1 cut(s) 287
Eam1104I CTCTTC 3 cut(s) 139, 317, 852
EarI CTCTTC 3 cut(s) 139, 317, 852
EciI GGCGGA 1 cut(s) 326
EclXI CGGCCG 1 cut(s) 287
Eco130I CCWWGG 3 cut(s) 1602, 2849, 2898
Eco147I AGGCCT 1 cut(s) 871
Eco24I GRGCYC 4 cut(s) 69, 220, 231, 2376
Eco31I GGTCTC 2 cut(s) 1076, 2887
Eco47I GGWCC 1 cut(s) 1637
Eco52I CGGCCG 1 cut(s) 287
Eco57I CTGAAG 7 cut(s) 602, 876, 1535, 1544, 1641, 1935, 2085
Eco81I CCTNAGG 1 cut(s) 873
Eco88I CYCGRG 1 cut(s) 1000
EcoNI CCTNNNNNAGG 1 cut(s) 2875
EcoO109I RGGNCCY 4 cut(s) 216, 227, 1637, 2853
EcoRII CCWGG 6 cut(s) 222, 1303, 1620, 1696, 2265, 2773
EcoT14I CCWWGG 3 cut(s) 1602, 2849, 2898
EcoT38I GRGCYC 4 cut(s) 69, 220, 231, 2376
ErhI CCWWGG 3 cut(s) 1602, 2849, 2898
Esp3I CGTCTC 1 cut(s) 306
FalI AAGNNNNNCTT 6 cut(s) 721, 753, 788, 820, 1517, 1549
FaqI GGGAC 2 cut(s) 580, 1650
FauI CCCGC 2 cut(s) 227, 687
FbaI TGATCA 2 cut(s) 1486, 1642
FblI GTMKAC 2 cut(s) 845, 2228
FokI GGATG 5 cut(s) 2153, 2159, 2264, 2360, 2923
FriOI GRGCYC 4 cut(s) 69, 220, 231, 2376
FspBI CTAG 4 cut(s) 770, 1214, 2576, 2787
GsuI CTGGAG 1 cut(s) 326
HapII CCGG 6 cut(s) 24, 38, 56, 90, 290, 563
HgaI GACGC 3 cut(s) 29, 90, 249
Hin1I GRCGYC 4 cut(s) 21, 82, 260, 299
HincII GTYRAC 5 cut(s) 141, 210, 709, 846, 1571
HindII GTYRAC 5 cut(s) 141, 210, 709, 846, 1571
HpaII CCGG 6 cut(s) 24, 38, 56, 90, 290, 563
HphI GGTGA 2 cut(s) 877, 1484
Hpy166II GTNNAC 8 cut(s) 141, 210, 438, 709, 846, 1571, 2229, 2444
Hpy8I GTNNAC 8 cut(s) 141, 210, 438, 709, 846, 1571, 2229, 2444
Hpy99I CGWCG 6 cut(s) 23, 84, 151, 247, 265, 301
HpyAV CCTTC 9 cut(s) 163, 577, 1100, 1219, 1510, 1519, 2124, 2229, 2557
HpyCH4III ACNGT 7 cut(s) 422, 697, 713, 820, 1629, 2279, 2305
HpyCH4IV ACGT 2 cut(s) 299, 931
HpySE526I ACGT 2 cut(s) 299, 931
Hsp92I GRCGYC 4 cut(s) 21, 82, 260, 299
Ksp22I TGATCA 2 cut(s) 1486, 1642
LmnI GCTCC 8 cut(s) 193, 292, 313, 460, 595, 1033, 1699, 2903
Lsp1109I GCAGC 9 cut(s) 126, 259, 266, 1771, 2518, 2542, 2564, 2624, 2743
LweI GCATC 4 cut(s) 382, 1225, 1681, 2207
MabI ACCWGGT 1 cut(s) 2773
MaeI CTAG 4 cut(s) 770, 1214, 2576, 2787
MaeII ACGT 2 cut(s) 299, 931
MaeIII GTNAC 9 cut(s) 416, 932, 1340, 1805, 1906, 1923, 2007, 2299, 2833
MfeI CAATTG 3 cut(s) 532, 849, 2705
MflI RGATCY 3 cut(s) 383, 559, 1738
MhlI GDGCHC 5 cut(s) 69, 220, 231, 2376, 2746
MlsI TGGCCA 1 cut(s) 2825
MluNI TGGCCA 1 cut(s) 2825
MlyI GAGTC 8 cut(s) 44, 154, 851, 992, 1394, 2042, 2048, 2093
MmeI TCCRAC 8 cut(s) 318, 573, 586, 839, 1286, 2625, 2626, 2939
Mox20I TGGCCA 1 cut(s) 2825
MroXI GAANNNNTTC 2 cut(s) 548, 2113
MscI TGGCCA 1 cut(s) 2825
MseI TTAA 6 cut(s) 662, 806, 981, 1673, 2667, 2924
MslI CAYNNNNRTG 3 cut(s) 1028, 1224, 2135
Msp20I TGGCCA 1 cut(s) 2825
MspA1I CMGCKG 6 cut(s) 257, 272, 884, 914, 2210, 2555
MspI CCGG 6 cut(s) 24, 38, 56, 90, 290, 563
MspR9I CCNGG 7 cut(s) 224, 564, 1305, 1622, 1698, 2267, 2775
MunI CAATTG 3 cut(s) 532, 849, 2705
Mva1269I GAATGC 2 cut(s) 1616, 2799
MvaI CCWGG 6 cut(s) 224, 1305, 1622, 1698, 2267, 2775
MvnI CGCG 5 cut(s) 15, 79, 165, 390, 701
NciI CCSGG 1 cut(s) 564
NcoI CCATGG 2 cut(s) 1602, 2898
NmeAIII GCCGAG 2 cut(s) 99, 107
NmuCI GTSAC 4 cut(s) 416, 1340, 1805, 1923
NruI TCGCGA 4 cut(s) 79, 165, 390, 701
NspI RCATGY 1 cut(s) 592
PagI TCATGA 1 cut(s) 1960
PceI AGGCCT 1 cut(s) 871
PciI ACATGT 1 cut(s) 588
PcsI WCGNNNNNNNCGW 3 cut(s) 134, 143, 993
PctI GAATGC 2 cut(s) 1616, 2799
PdmI GAANNNNTTC 2 cut(s) 548, 2113
PfeI GAWTC 4 cut(s) 445, 617, 734, 773
PflFI GACNNNGTC 1 cut(s) 1811
PleI GAGTC 8 cut(s) 44, 154, 850, 992, 1393, 2042, 2047, 2092
PpsI GAGTC 8 cut(s) 44, 154, 850, 992, 1393, 2042, 2047, 2092
PpuMI RGGWCCY 1 cut(s) 1637
PscI ACATGT 1 cut(s) 588
Psp1406I AACGTT 1 cut(s) 931
Psp5II RGGWCCY 1 cut(s) 1637
Psp6I CCWGG 6 cut(s) 222, 1303, 1620, 1696, 2265, 2773
PspGI CCWGG 6 cut(s) 222, 1303, 1620, 1696, 2265, 2773
PspOMI GGGCCC 2 cut(s) 216, 227
PspPI GGNCC 8 cut(s) 203, 216, 217, 227, 228, 878, 1637, 2853
PspPPI RGGWCCY 1 cut(s) 1637
PsrI GAACNNNNNNTAC 2 cut(s) 496, 528
PstI CTGCAG 4 cut(s) 1690, 1789, 2545, 2560
PstNI CAGNNNCTG 3 cut(s) 420, 2303, 2555
PsuI RGATCY 3 cut(s) 383, 559, 1738
PsyI GACNNNGTC 1 cut(s) 1811
PvuII CAGCTG 5 cut(s) 272, 884, 914, 2210, 2555
RruI TCGCGA 4 cut(s) 79, 165, 390, 701
RsaI GTAC 1 cut(s) 893
RsaNI GTAC 1 cut(s) 892
RseI CAYNNNNRTG 3 cut(s) 1028, 1224, 2135
SalI GTCGAC 1 cut(s) 844
SaqAI TTAA 6 cut(s) 662, 806, 981, 1673, 2667, 2924
Sau96I GGNCC 8 cut(s) 203, 216, 217, 227, 228, 878, 1637, 2853
SchI GAGTC 8 cut(s) 44, 154, 851, 992, 1394, 2042, 2048, 2093
ScrFI CCNGG 7 cut(s) 224, 564, 1305, 1622, 1698, 2267, 2775
SduI GDGCHC 5 cut(s) 69, 220, 231, 2376, 2746
SexAI ACCWGGT 1 cut(s) 2773
SfaNI GCATC 4 cut(s) 382, 1225, 1681, 2207
SfcI CTRYAG 5 cut(s) 1686, 1785, 2229, 2541, 2556
SfiI GGCCNNNNNGGCC 1 cut(s) 877
SinI GGWCC 1 cut(s) 1637
SmiMI CAYNNNNRTG 3 cut(s) 1028, 1224, 2135
SmlI CTYRAG 1 cut(s) 2057
SmoI CTYRAG 1 cut(s) 2057
SseBI AGGCCT 1 cut(s) 871
SspMI CTAG 4 cut(s) 770, 1214, 2576, 2787
StuI AGGCCT 1 cut(s) 871
StyD4I CCNGG 7 cut(s) 222, 562, 1303, 1620, 1696, 2265, 2773
StyI CCWWGG 3 cut(s) 1602, 2849, 2898
TaaI ACNGT 7 cut(s) 422, 697, 713, 820, 1629, 2279, 2305
TaiI ACGT 2 cut(s) 302, 934
TaqI TCGA 9 cut(s) 149, 263, 502, 620, 845, 996, 1200, 1715, 2891
TauI GCSGC 6 cut(s) 18, 126, 260, 289, 356, 1616
TfiI GAWTC 4 cut(s) 445, 617, 734, 773
Tru1I TTAA 6 cut(s) 662, 806, 981, 1673, 2667, 2924
Tru9I TTAA 6 cut(s) 662, 806, 981, 1673, 2667, 2924
TseFI GTSAC 4 cut(s) 416, 1340, 1805, 1923
TseI GCWGC 9 cut(s) 114, 254, 272, 1784, 2531, 2552, 2555, 2612, 2756
Tsp45I GTSAC 4 cut(s) 416, 1340, 1805, 1923
TspDTI ATGAA 8 cut(s) 437, 1012, 1293, 1437, 1443, 2510, 2751, 2925
Tth111I GACNNNGTC 1 cut(s) 1811
VpaK11BI GGWCC 1 cut(s) 1637
XagI CCTNNNNNAGG 1 cut(s) 2875
XapI RAATTY 5 cut(s) 548, 664, 992, 1365, 2203
XbaI TCTAGA 1 cut(s) 2786
XceI RCATGY 1 cut(s) 592
XcmI CCANNNNNNNNNTGG 2 cut(s) 403, 1855
XmiI GTMKAC 2 cut(s) 845, 2228
XmnI GAANNNNTTC 2 cut(s) 548, 2113
XspI CTAG 4 cut(s) 770, 1214, 2576, 2787
ZraI GACGTC 1 cut(s) 300
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.