Rh6DG109600
MYB Family

SWI SNF complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0006872
Physical Location & Seq
Forward (+)
14404141 .. 14410577
6437 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG109600.1

Sequence Viewer

Length: 2739 bp
ATGTTGCAAAGCCCAAACCCCGATCCGCATCCAAACCCATTCCCCCCATCCATGGAAGAAAAACGCGGAGACGCCGGAACTCAGCCTCCGGCTAATGCCGCCGACTCTCCGGCCGCCGAGCCTACTTCTTCGAGACGCCGCGCCGGAGGCCAAAAGCGAAAGGCCGGCAGCCTCGGCGGCTCGGGCTCTTCATCAACACCGTCGAAACGCTTGACTCGCGAGAAGGCTTCGCTTTCTCACCCTCCGATCCACAACGGCCCGTTGACGAGGGCCCGCCAGGGGCCCAATAACCATGCGTCGGCCTCAGCCGCGGCCGTGAAGCCAGCTGCTCAGACGAAGCGGCCGGAGCCGTCGTCGGTGGAGGCGGAGCGGGCTAAAAGGGAGAGCGAGTTGGAGGCTTTGGAGGCTTCTATGGAAGCTGAGTTTGAAGCCATTAGATCTCGCGATGCCAATGCTCATGTGGTTCCCAGTCATTGTGGTTGGTTTTCATGGACAAAGATTCACGCCATTGAGGAGCGTATGTTGCCGTCTTTCTTTAATGGGAAGTCTGATACTCGAACTCCCGATACATACCTGGAGATACGCAATTGTATTATGAAAAAATTCCATGCGAATCCGGGAACATTGGTTGAACTGAAGGATATGTTGGAGCTTGAAGTGGGAGACTTCGATTCAAGACAAGAAGTAATGGAATTTTTGGACCACTGGGGTTTGATAAATTTCCACCCTTTCCCACCAACAGGTTCTACTGTTGCAAATGTCAACAGTGATGAGGTGACAGAAAGGGATTCTTTGGTAGATAAGTTGTATCACTTTGAAGCACTAGAATCACGATCATCAGTGGTTCCTAAGACTAACTTATTTACTCCAACTGTGCCATCTGGTCTGTTCCCAGAGTCTACATTTGCTGACGAATTGGTGAGGCCTGAGGGGCCAGCTGTTGAGTACCATTGCAACTCTTGTTCAGCTGATTGCTCACGCAAACGCTACCATTGCCAGAAGCAGGCAGATTTTGATCTGTGCTCTGATTGCTTTAACAACGGGAAATTCGACTCGGGTATGTCTTCATCAGATTTTATTCTTATGGAGCCTGCTGAGGCTCCTGGGGTAAGTGGTGGGAAGTGGACAGATCAGGAGACCCTCCTTCTCCTGGAAGCATTAGAATTATATAAAGAAAACTGGAATGAGATTGCTGAACATGTTGCTACAAAAACAAAAGCTCAGTGTATATTGCACTTTGTTCAAATGCCAATTGAGGATACCTTCCTAGATCGTGATGATGATATTGATGCCAGTGCCAAAGAAACTGCAGATCCAACTTCAACTAACAATGATTTATTGCCCCCCAAAGATGCCCCTGAAACAACAGAGAATAAGACAAGTGCTAATGAGAGTGACCCTCAAACTTCCCCAATGGAAATTTCAAAAGAAGAAGCAAGTGAGGTTAAAGTTGGGGAGGATACTTCAAGGCCAGAAGATGAAAATGAAGTCAAAGTTGGTCAGGACACCTCGAAGTTGGAAGATACTGGTGATTTGAAAATTGATCAGGAAACAGATGAGAACCTTGCATTGAAGGCTCTTAAAGAAGCCTTTGAAGTTGTTGGTTATCCTCAAACACCTGAAAGTCAACTCTCATTTGCAGATGTGGGAAACCCTGCCATGGCATTGGCAGCATTCCTGGCACGGTTGGTGGGACCTGATCATGCCATTGCCTCGGCACATAATTCTTTGAAATCCATATCTGCAGATTCTCCCGGCATTGAGCTGGCTTCGAGGCACTGCTTTATTTTGGAAGATCCACCAAATGACAGAAAGGAACAAGCTAGTCATGATAGTGTTGCTGCTGAAAGGGAAGTGCAGAGTGAGAAAGTCGATGAAGAAAATTGTCATGAAGAGGATAACTCCACCTCAGGTTTGGAAGATAGAGGTGTATCAAATGATAACAACGACAAGAAACTTGAAGAAGTTACTCCTGAAGAAAAGTCACAATCTACAAAAGAACAAGATGACAGGGTTTCTCATGAGGAAGTAGGAACTGATAAATTGAACAAGTCAAACAACTCAGAGTTACCAAATGACCAACCACCAACTTTGGGGGAGTCAGATAATTCAAAAGTTGAGACACCACCAAGTTCAGTAAAGGAGTTGGGAGAGAGAACTTCAGTAGGACAGCCTTCTGAAACAGTAGAGACACCAATGGATGTGGATATGTCTGACTCCAATCCCTCAACGAAGAAGGAGCCTCAGCAACCAGTTACATCAAATTCAGCTGAGGAACCTTCTCAGTCTAAAGAGGCATCAAAAGAAGTGGATGTATCTAATGCTCTGCCTTCAGAAAGAGATGAGCCTCCACCACCAGTTACTGAAGAACCCCCTCAACCTACAGAAACATCAAAGGATGTTCTTATGGTGTGTGACTCTCAGCCCCCACAAGAGAATGAGCCTTCCCAACCAGTTGAAAACACTGCAAGTGAGGATCAGACTAATGATAGTAAACACGAGAAGCATGACTGTACAGACCCAAAAAATGATAAAAAGCAAGAGACAAAAGGCGAACAGAAGATTGATAAAATAAAGCAAGCTGCAGTTTCTGCAGTCTCAGCAGCTGCTGTGAAGGCAAAACTTCTAGCAGAACAGGAAGAAGATCAAATTCGACAGCTTGCAGCAATGTTGATAGAGAAGCAGGTCATCCCAATGCCATATTTTCTCCATACTGTTTGTTTGCTATTAATAACGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Myb_DNA-binding SWIRM SWIRM-assoc_1 ZZ

Protein Analysis

912

Amino Acids

99.96

Weight (kDa)

4.64

Isoelectric Point (pI)

53.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SWIRM PF04433 163 - 241 1.7e-21 SWIRM domain
ZZ PF00569 315 - 350 1e-08 Zinc finger, ZZ type
Myb_DNA-binding PF00249 373 - 415 4e-12 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 375 - 415 1.1e-06 Myb-like DNA-binding domain
SWIRM-assoc_1 PF16495 864 - 896 3.9e-06 SWIRM-associated region 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2674
AccBSI CCGCTC 1 cut(s) 370
AccI GTMKAC 1 cut(s) 899
AccII CGCG 5 cut(s) 66, 141, 219, 311, 444
AclWI GGATC 5 cut(s) 17, 241, 1307, 1790, 2484
AcoI YGGCCR 3 cut(s) 111, 312, 341
AcsI RAATTY 7 cut(s) 602, 692, 718, 1046, 1419, 2263, 2649
AcuI CTGAAG 5 cut(s) 656, 1995, 2145, 2316, 2385
AcyI GRCGYC 2 cut(s) 72, 136
AfaI GTAC 2 cut(s) 947, 2515
AfiI CCNNNNNNNGG 8 cut(s) 52, 279, 298, 740, 1003, 1150, 1660, 2093
AflIII ACRYGT 1 cut(s) 1198
AjnI CCWGG 5 cut(s) 276, 573, 1102, 1149, 1677
AjuI GAANNNNNNNTTGG 6 cut(s) 629, 661, 1405, 1437, 1479, 1511
AloI GAACNNNNNNTCC 2 cut(s) 70, 102
Alw21I GWGCWC 1 cut(s) 1025
Alw26I GTCTC 8 cut(s) 63, 127, 657, 1130, 2114, 2183, 2537, 2602
AlwI GGATC 5 cut(s) 17, 241, 1307, 1790, 2484
AlwNI CAGNNNCTG 4 cut(s) 2363, 2591, 2606, 2609
Ama87I CYCGRG 2 cut(s) 181, 1054
ApaI GGGCCC 2 cut(s) 274, 285
ApeKI GCWGC 8 cut(s) 168, 326, 1670, 1841, 2582, 2603, 2606, 2663
ApoI RAATTY 7 cut(s) 602, 692, 718, 1046, 1419, 2263, 2649
AseI ATTAAT 1 cut(s) 2729
Asp700I GAANNNNTTC 1 cut(s) 602
AspLEI GCGC 1 cut(s) 143
AspS9I GGNCC 8 cut(s) 257, 270, 271, 281, 282, 700, 932, 1694
AsuC2I CCSGG 2 cut(s) 618, 1755
AsuHPI GGTGA 4 cut(s) 230, 787, 931, 1541
AvaI CYCGRG 2 cut(s) 181, 1054
AvaII GGWCC 2 cut(s) 700, 1694
AxyI CCTNAGG 2 cut(s) 927, 1909
BaeGI GKGCMC 2 cut(s) 274, 285
BanII GRGCYC 3 cut(s) 188, 274, 285
BauI CACGAG 1 cut(s) 2498
BbsI GAAGAC 1 cut(s) 1056
Bbv12I GWGCWC 1 cut(s) 1025
BbvCI CCTCAGC 4 cut(s) 304, 1095, 2244, 2271
BbvI GCAGC 8 cut(s) 180, 313, 1682, 1828, 2569, 2593, 2615, 2675
BccI CCATC 2 cut(s) 55, 886
BceAI ACGGC 4 cut(s) 271, 299, 334, 511
BcgI CGANNNNNNTGC 2 cut(s) 434, 468
BciT130I CCWGG 5 cut(s) 278, 575, 1104, 1151, 1679
BciVI GTATCC 2 cut(s) 1252, 1453
BclI TGATCA 2 cut(s) 1543, 1699
BcnI CCSGG 2 cut(s) 618, 1755
BcoDI GTCTC 8 cut(s) 63, 127, 657, 1130, 2114, 2183, 2537, 2602
BfaI CTAG 4 cut(s) 824, 1268, 1824, 2627
BfmI CTRYAG 5 cut(s) 1308, 1743, 2382, 2583, 2592
BfuAI ACCTGC 1 cut(s) 2674
BfuI GTATCC 2 cut(s) 1252, 1453
BglI GCCNNNNNGGC 2 cut(s) 177, 931
BglII AGATCT 1 cut(s) 437
Bme1390I CCNGG 7 cut(s) 278, 575, 618, 1104, 1151, 1679, 1755
Bme18I GGWCC 2 cut(s) 700, 1694
BmeT110I CYCGRG 2 cut(s) 181, 1054
BmgT120I GGNCC 8 cut(s) 257, 270, 271, 281, 282, 700, 932, 1694
BmrFI CCNGG 7 cut(s) 278, 575, 618, 1104, 1151, 1679, 1755
BmrI ACTGGG 2 cut(s) 462, 715
BmsI GCATC 5 cut(s) 37, 436, 1279, 1342, 2306
BmuI ACTGGG 2 cut(s) 462, 715
BpiI GAAGAC 1 cut(s) 1056
BplI GAGNNNNNCTC 4 cut(s) 1384, 1416, 1886, 1918
BpmI CTGGAG 1 cut(s) 596
Bpu10I CCTNAGC 4 cut(s) 304, 1095, 2244, 2271
BpuMI CCSGG 2 cut(s) 618, 1755
BsaBI GATNNNNATC 2 cut(s) 27, 1014
BsaHI GRCGYC 2 cut(s) 72, 136
BsaI GGTCTC 1 cut(s) 1130
BsaJI CCNNGG 7 cut(s) 51, 172, 277, 309, 1103, 1659, 1713
Bsc4I CCNNNNNNNGG 8 cut(s) 52, 279, 298, 740, 1003, 1150, 1660, 2093
Bse118I RCCGGY 1 cut(s) 164
Bse1I ACTGG 8 cut(s) 468, 710, 1184, 1293, 1531, 2252, 2357, 2453
Bse21I CCTNAGG 2 cut(s) 927, 1909
Bse3DI GCAATG 4 cut(s) 949, 991, 1707, 2673
Bse8I GATNNNNATC 2 cut(s) 27, 1014
BseBI CCWGG 5 cut(s) 278, 575, 1104, 1151, 1679
BseDI CCNNGG 7 cut(s) 51, 172, 277, 309, 1103, 1659, 1713
BseGI GGATG 6 cut(s) 28, 47, 2206, 2317, 2404, 2688
BseJI GATNNNNATC 2 cut(s) 27, 1014
BseLI CCNNNNNNNGG 8 cut(s) 52, 279, 298, 740, 1003, 1150, 1660, 2093
BseMI GCAATG 4 cut(s) 949, 991, 1707, 2673
BseNI ACTGG 8 cut(s) 468, 710, 1184, 1293, 1531, 2252, 2357, 2453
BseRI GAGGAG 1 cut(s) 527
BseSI GKGCMC 2 cut(s) 274, 285
BseX3I CGGCCG 3 cut(s) 111, 312, 341
BseXI GCAGC 8 cut(s) 180, 313, 1682, 1828, 2569, 2593, 2615, 2675
BsgI GTGCAG 1 cut(s) 1877
Bsh1236I CGCG 5 cut(s) 66, 141, 219, 311, 444
Bsh1285I CGRYCG 3 cut(s) 114, 315, 344
BsiEI CGRYCG 3 cut(s) 114, 315, 344
BsiHKAI GWGCWC 1 cut(s) 1025
BsiHKCI CYCGRG 2 cut(s) 181, 1054
BsiSI CCGG 8 cut(s) 75, 89, 110, 144, 165, 344, 617, 1755
BslFI GGGAC 1 cut(s) 1707
BslI CCNNNNNNNGG 8 cut(s) 52, 279, 298, 740, 1003, 1150, 1660, 2093
BsmAI GTCTC 8 cut(s) 63, 127, 657, 1130, 2114, 2183, 2537, 2602
BsmBI CGTCTC 2 cut(s) 63, 127
BsmFI GGGAC 1 cut(s) 1707
BsmI GAATGC 1 cut(s) 1673
Bso31I GGTCTC 1 cut(s) 1130
BsoBI CYCGRG 2 cut(s) 181, 1054
Bsp120I GGGCCC 2 cut(s) 270, 281
Bsp1286I GDGCHC 4 cut(s) 188, 274, 285, 1025
Bsp1407I TGTACA 1 cut(s) 2513
Bsp19I CCATGG 2 cut(s) 51, 1659
Bsp68I TCGCGA 2 cut(s) 219, 444
BspFNI CGCG 5 cut(s) 66, 141, 219, 311, 444
BspHI TCATGA 3 cut(s) 1828, 1888, 2020
BspMAI CTGCAG 4 cut(s) 1312, 1747, 2587, 2596
BspMI ACCTGC 1 cut(s) 2674
BspPI GGATC 5 cut(s) 17, 241, 1307, 1790, 2484
BspQI GCTCTTC 1 cut(s) 193
BspTNI GGTCTC 1 cut(s) 1130
BsrBI CCGCTC 1 cut(s) 370
BsrDI GCAATG 4 cut(s) 949, 991, 1707, 2673
BsrFI RCCGGY 1 cut(s) 164
BsrGI TGTACA 1 cut(s) 2513
BsrI ACTGG 8 cut(s) 468, 710, 1184, 1293, 1531, 2252, 2357, 2453
BssAI RCCGGY 1 cut(s) 164
BssECI CCNNGG 7 cut(s) 51, 172, 277, 309, 1103, 1659, 1713
BssNI GRCGYC 2 cut(s) 72, 136
BssSI CACGAG 1 cut(s) 2498
BssT1I CCWWGG 2 cut(s) 51, 1659
Bst2BI CACGAG 1 cut(s) 2498
Bst2UI CCWGG 5 cut(s) 278, 575, 1104, 1151, 1679
Bst4CI ACNGT 8 cut(s) 201, 751, 767, 874, 1686, 2185, 2513, 2716
Bst6I CTCTTC 2 cut(s) 193, 1887
BstACI GRCGYC 2 cut(s) 72, 136
BstAPI GCANNNNNTGC 1 cut(s) 2591
BstAUI TGTACA 1 cut(s) 2513
BstDSI CCRYGG 3 cut(s) 51, 309, 1659
BstF5I GGATG 6 cut(s) 28, 47, 2206, 2317, 2404, 2688
BstFNI CGCG 5 cut(s) 66, 141, 219, 311, 444
BstHHI GCGC 1 cut(s) 143
BstMAI GTCTC 8 cut(s) 63, 127, 657, 1130, 2114, 2183, 2537, 2602
BstMCI CGRYCG 3 cut(s) 114, 315, 344
BstNI CCWGG 5 cut(s) 278, 575, 1104, 1151, 1679
BstNSI RCATGY 1 cut(s) 1202
BstSCI CCNGG 7 cut(s) 276, 573, 616, 1102, 1149, 1677, 1753
BstSFI CTRYAG 5 cut(s) 1308, 1743, 2382, 2583, 2592
BstSLI GKGCMC 2 cut(s) 274, 285
BstUI CGCG 5 cut(s) 66, 141, 219, 311, 444
BstV1I GCAGC 8 cut(s) 180, 313, 1682, 1828, 2569, 2593, 2615, 2675
BstV2I GAAGAC 1 cut(s) 1056
BstX2I RGATCY 3 cut(s) 437, 1312, 1795
BstXI CCANNNNNNTGG 1 cut(s) 1666
BstYI RGATCY 3 cut(s) 437, 1312, 1795
BstZI CGGCCG 3 cut(s) 111, 312, 341
Bsu36I CCTNAGG 2 cut(s) 927, 1909
BsuI GTATCC 2 cut(s) 1252, 1453
BtgI CCRYGG 3 cut(s) 51, 309, 1659
BtgZI GCGATG 1 cut(s) 459
BtsCI GGATG 6 cut(s) 28, 47, 2206, 2317, 2404, 2688
BtsI GCAGTG 2 cut(s) 1777, 2463
BtsIMutI CAGTG 7 cut(s) 703, 772, 846, 1229, 1300, 1777, 2463
BtuMI TCGCGA 2 cut(s) 219, 444
BveI ACCTGC 1 cut(s) 2674
CaiI CAGNNNCTG 4 cut(s) 2363, 2591, 2606, 2609
CciI TCATGA 3 cut(s) 1828, 1888, 2020
CfoI GCGC 1 cut(s) 143
Cfr10I RCCGGY 1 cut(s) 164
Cfr13I GGNCC 8 cut(s) 257, 270, 271, 281, 282, 700, 932, 1694
Cfr42I CCGCGG 1 cut(s) 312
CseI GACGC 3 cut(s) 80, 144, 285
Csp6I GTAC 2 cut(s) 946, 2514
CspCI CAANNNNNGTGG 6 cut(s) 2073, 2108, 2184, 2219, 2289, 2324
CviQI GTAC 2 cut(s) 946, 2514
EaeI YGGCCR 3 cut(s) 111, 312, 341
EagI CGGCCG 3 cut(s) 111, 312, 341
Eam1104I CTCTTC 2 cut(s) 193, 1887
EarI CTCTTC 2 cut(s) 193, 1887
EciI GGCGGA 1 cut(s) 380
EclXI CGGCCG 3 cut(s) 111, 312, 341
Eco130I CCWWGG 2 cut(s) 51, 1659
Eco147I AGGCCT 1 cut(s) 925
Eco24I GRGCYC 3 cut(s) 188, 274, 285
Eco31I GGTCTC 1 cut(s) 1130
Eco47I GGWCC 2 cut(s) 700, 1694
Eco52I CGGCCG 3 cut(s) 111, 312, 341
Eco57I CTGAAG 5 cut(s) 656, 1995, 2145, 2316, 2385
Eco81I CCTNAGG 2 cut(s) 927, 1909
Eco88I CYCGRG 2 cut(s) 181, 1054
EcoO109I RGGNCCY 3 cut(s) 270, 281, 1694
EcoRII CCWGG 5 cut(s) 276, 573, 1102, 1149, 1677
EcoT14I CCWWGG 2 cut(s) 51, 1659
EcoT38I GRGCYC 3 cut(s) 188, 274, 285
ErhI CCWWGG 2 cut(s) 51, 1659
Esp3I CGTCTC 2 cut(s) 63, 127
FalI AAGNNNNNCTT 4 cut(s) 775, 807, 842, 874
FaqI GGGAC 1 cut(s) 1707
FauI CCCGC 2 cut(s) 281, 363
FbaI TGATCA 2 cut(s) 1543, 1699
FblI GTMKAC 1 cut(s) 899
FokI GGATG 6 cut(s) 15, 34, 2213, 2324, 2411, 2675
FriOI GRGCYC 3 cut(s) 188, 274, 285
FspBI CTAG 4 cut(s) 824, 1268, 1824, 2627
GlaI GCGC 1 cut(s) 142
GsuI CTGGAG 1 cut(s) 596
HapII CCGG 8 cut(s) 75, 89, 110, 144, 165, 344, 617, 1755
HgaI GACGC 3 cut(s) 80, 144, 285
HhaI GCGC 1 cut(s) 143
Hin1I GRCGYC 2 cut(s) 72, 136
Hin6I GCGC 1 cut(s) 141
HinP1I GCGC 1 cut(s) 141
HincII GTYRAC 3 cut(s) 264, 763, 1628
HindII GTYRAC 3 cut(s) 264, 763, 1628
HpaII CCGG 8 cut(s) 75, 89, 110, 144, 165, 344, 617, 1755
HphI GGTGA 4 cut(s) 230, 787, 931, 1541
Hpy166II GTNNAC 6 cut(s) 264, 763, 900, 1125, 1628, 2495
Hpy8I GTNNAC 6 cut(s) 264, 763, 900, 1125, 1628, 2495
Hpy99I CGWCG 4 cut(s) 205, 301, 355, 358
HpyCH4III ACNGT 8 cut(s) 201, 751, 767, 874, 1686, 2185, 2513, 2716
HpyCH4IV ACGT 1 cut(s) 2735
HpySE526I ACGT 1 cut(s) 2735
Hsp92I GRCGYC 2 cut(s) 72, 136
HspAI GCGC 1 cut(s) 141
KroI GCCGGC 1 cut(s) 164
KroNI GCCGGC 1 cut(s) 166
Ksp22I TGATCA 2 cut(s) 1543, 1699
KspI CCGCGG 1 cut(s) 312
LguI GCTCTTC 1 cut(s) 193
LmnI GCTCC 7 cut(s) 346, 367, 514, 649, 1087, 1105, 2239
Lsp1109I GCAGC 8 cut(s) 180, 313, 1682, 1828, 2569, 2593, 2615, 2675
LweI GCATC 5 cut(s) 37, 436, 1279, 1342, 2306
MaeI CTAG 4 cut(s) 824, 1268, 1824, 2627
MaeII ACGT 1 cut(s) 2735
MaeIII GTNAC 8 cut(s) 775, 1394, 1966, 1983, 2067, 2254, 2359, 2414
MbiI CCGCTC 1 cut(s) 370
MfeI CAATTG 2 cut(s) 586, 1251
MflI RGATCY 3 cut(s) 437, 1312, 1795
MhlI GDGCHC 4 cut(s) 188, 274, 285, 1025
MlyI GAGTC 7 cut(s) 98, 208, 905, 1046, 2108, 2210, 2411
MmeI TCCRAC 5 cut(s) 372, 627, 893, 1340, 1497
MroNI GCCGGC 1 cut(s) 164
MroXI GAANNNNTTC 1 cut(s) 602
MseI TTAA 5 cut(s) 537, 1035, 1446, 1581, 2729
MslI CAYNNNNRTG 2 cut(s) 1833, 2693
MspA1I CMGCKG 6 cut(s) 311, 326, 938, 968, 2270, 2606
MspI CCGG 8 cut(s) 75, 89, 110, 144, 165, 344, 617, 1755
MspR9I CCNGG 7 cut(s) 278, 575, 618, 1104, 1151, 1679, 1755
MunI CAATTG 2 cut(s) 586, 1251
Mva1269I GAATGC 1 cut(s) 1673
MvaI CCWGG 5 cut(s) 278, 575, 1104, 1151, 1679
MvnI CGCG 5 cut(s) 66, 141, 219, 311, 444
NaeI GCCGGC 1 cut(s) 166
NciI CCSGG 2 cut(s) 618, 1755
NcoI CCATGG 2 cut(s) 51, 1659
NgoMIV GCCGGC 1 cut(s) 164
NmeAIII GCCGAG 3 cut(s) 142, 153, 1694
NmuCI GTSAC 4 cut(s) 775, 1394, 1983, 2414
NruI TCGCGA 2 cut(s) 219, 444
NspI RCATGY 1 cut(s) 1202
PagI TCATGA 3 cut(s) 1828, 1888, 2020
PceI AGGCCT 1 cut(s) 925
PciI ACATGT 1 cut(s) 1198
PciSI GCTCTTC 1 cut(s) 193
PcsI WCGNNNNNNNCGW 1 cut(s) 1047
PctI GAATGC 1 cut(s) 1673
PdiI GCCGGC 1 cut(s) 166
PdmI GAANNNNTTC 1 cut(s) 602
PfeI GAWTC 6 cut(s) 499, 613, 671, 788, 827, 1748
PfoI TCCNGGA 2 cut(s) 616, 1149
PleI GAGTC 7 cut(s) 98, 208, 904, 1046, 2107, 2210, 2411
PpsI GAGTC 7 cut(s) 98, 208, 904, 1046, 2107, 2210, 2411
PpuMI RGGWCCY 1 cut(s) 1694
PscI ACATGT 1 cut(s) 1198
PshBI ATTAAT 1 cut(s) 2729
Psp5II RGGWCCY 1 cut(s) 1694
Psp6I CCWGG 5 cut(s) 276, 573, 1102, 1149, 1677
PspGI CCWGG 5 cut(s) 276, 573, 1102, 1149, 1677
PspOMI GGGCCC 2 cut(s) 270, 281
PspPI GGNCC 8 cut(s) 257, 270, 271, 281, 282, 700, 932, 1694
PspPPI RGGWCCY 1 cut(s) 1694
PsrI GAACNNNNNNTAC 2 cut(s) 550, 582
PstI CTGCAG 4 cut(s) 1312, 1747, 2587, 2596
PstNI CAGNNNCTG 4 cut(s) 2363, 2591, 2606, 2609
PsuI RGATCY 3 cut(s) 437, 1312, 1795
PvuII CAGCTG 5 cut(s) 326, 938, 968, 2270, 2606
RruI TCGCGA 2 cut(s) 219, 444
RsaI GTAC 2 cut(s) 947, 2515
RsaNI GTAC 2 cut(s) 946, 2514
RseI CAYNNNNRTG 2 cut(s) 1833, 2693
SacII CCGCGG 1 cut(s) 312
SapI GCTCTTC 1 cut(s) 193
SaqAI TTAA 5 cut(s) 537, 1035, 1446, 1581, 2729
Sau96I GGNCC 8 cut(s) 257, 270, 271, 281, 282, 700, 932, 1694
SchI GAGTC 7 cut(s) 98, 208, 905, 1046, 2108, 2210, 2411
ScrFI CCNGG 7 cut(s) 278, 575, 618, 1104, 1151, 1679, 1755
SduI GDGCHC 4 cut(s) 188, 274, 285, 1025
SfaNI GCATC 5 cut(s) 37, 436, 1279, 1342, 2306
SfcI CTRYAG 5 cut(s) 1308, 1743, 2382, 2583, 2592
SfiI GGCCNNNNNGGCC 1 cut(s) 931
Sfr303I CCGCGG 1 cut(s) 312
SgrBI CCGCGG 1 cut(s) 312
SinI GGWCC 2 cut(s) 700, 1694
SmiMI CAYNNNNRTG 2 cut(s) 1833, 2693
SseBI AGGCCT 1 cut(s) 925
SspMI CTAG 4 cut(s) 824, 1268, 1824, 2627
StuI AGGCCT 1 cut(s) 925
StyD4I CCNGG 7 cut(s) 276, 573, 616, 1102, 1149, 1677, 1753
StyI CCWWGG 2 cut(s) 51, 1659
TaaI ACNGT 8 cut(s) 201, 751, 767, 874, 1686, 2185, 2513, 2716
TaiI ACGT 1 cut(s) 2738
TaqI TCGA 9 cut(s) 131, 203, 556, 669, 1050, 1511, 1772, 1872, 2653
TatI WGTACW 1 cut(s) 2513
TauI GCSGC 7 cut(s) 101, 116, 141, 180, 311, 314, 343
TfiI GAWTC 6 cut(s) 499, 613, 671, 788, 827, 1748
Tru1I TTAA 5 cut(s) 537, 1035, 1446, 1581, 2729
Tru9I TTAA 5 cut(s) 537, 1035, 1446, 1581, 2729
TscAI CASTG 7 cut(s) 710, 772, 846, 1229, 1300, 1784, 2470
TseFI GTSAC 4 cut(s) 775, 1394, 1983, 2414
TseI GCWGC 8 cut(s) 168, 326, 1670, 1841, 2582, 2603, 2606, 2663
Tsp45I GTSAC 4 cut(s) 775, 1394, 1983, 2414
TspDTI ATGAA 8 cut(s) 180, 477, 611, 1056, 1494, 1500, 1890, 1905
TspRI CASTG 7 cut(s) 710, 772, 846, 1229, 1300, 1784, 2470
VpaK11BI GGWCC 2 cut(s) 700, 1694
VspI ATTAAT 1 cut(s) 2729
XapI RAATTY 7 cut(s) 602, 692, 718, 1046, 1419, 2263, 2649
XceI RCATGY 1 cut(s) 1202
XcmI CCANNNNNNNNNTGG 2 cut(s) 457, 1912
XmiI GTMKAC 1 cut(s) 899
XmnI GAANNNNTTC 1 cut(s) 602
XspI CTAG 4 cut(s) 824, 1268, 1824, 2627
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.