MD05G1067900.v1.1
MYB Family

SWI SNF complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0006872
Physical Location & Seq
Reverse (-)
12764381 .. 12769823
5443 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1067900.v1.1.491

Sequence Viewer

Length: 3012 bp
ATGGAAGAAAAACGCCGCGACGCTGCCGGAACTCAGCCGCCGTCAAATGCCGACTCTCCAACCGCCGAGCCGTCTTCTACTCGGCGTCGTGGCGGAGCCCAAAAGCGAAAGGCAAGCAGCCTCGGCGGCTCAACCTCTTCATCGACGCCATCCAAACGTTTCGCTCGCGAGAAGGCTTTGCTTTCTCACACTTCGATCCACAACGGCCCGTTGACCCGGGCCCGTCAGGGCCCTAGCAGCCTCGCTTCGGCTTCATCAGCTGGGGCTGCTGCGAAGCCGGCGGTGCAAGCCAAGCGGCCTGACCCGGTGGGGGAGGCGGTGGCTGAGCTGGTGAAACGGGAGATCGATTTGGAGGCTCTGGAGGCTTCTATGGAGGCTGGGTTTGAATCCATTAGATCTCGCAGTGCCAATGCTCATGTTGTTCCTAGTCATTGCGGTTGGTTTTCTTGGACAAAGGTTCACTCCATTGAGGAGCAAATGTTGCCGTCTTTCTTTAATGGGAAGTCTGTGACTCGGACTCCTGACGTATACTTAGAGATACGTAATTGCATCATGAAGAAATTCAACGCAAATCCGGGCACATTTATTGAATTAAAGGACTTGTTGGAGCTTGAAGTTGGAGAATTTGATGCTAGACAAGAAATAATGGAATTTTTGGACCATTGGGGTTTGATTAATTTCCACCCATTCCCACCAACAGGTTCTTCTGTGGCCAGCATCGACGGTGATGGAGTGGTTGAAAAGGATTCTTTGGTTGATAAGTTGTATCACTTTGAAGCATTACAATCACGCTCATCAGTTGTTCCCAAGACTAATATAACGACCCCAACAGTGCTATCTGGGTTGTTTCCCGATTCTGCAATTGCTGAAGAGTTGGTTAGGCCTGAAGGGCCAGCTGTTGAGTACCATTGCAACTCTTGTTCAGCTGATTGCTCACGCAAGCGCTACCATTGCCAGAAGCAGGCAGATTTTGATCTATGCACTGATTGCTTTAATAATGGGAAATTCGACTCTGGCATGTCTTCGTCAGATTTCATTCTTATGGAGCCTGCTGAAGTTCCAAGTGTAAGTGGTGGGAACTGGACTGATCAGGAGACTCTCCTTCTCCTTGAAGCATTAGAACTTTATAAAGAAAACTGGAATGAGATTGCTGAACATGTTGCAACAAAAACAAAAGCTCAATGTATACTGCACTTTGTTCAAATGCCAATTGAGGACACTTTTCTTGATTATGACGATGGTTTTGATGGTAGTGCCAAAGAGACTGCATGTCCAACTTCAACCGGAAATGATTTATCGGCCCCCAAAGGTGCCTCTGAAGCAACAGAGAATAAGACTGCTGTTAGTGCGAGTGACCCCCAAACTTTCCCGATTGAAACTTCAAAAGAAGTGACTGAAGTAAACATTGGACAGGATACTTCAAAGCCAGAAGATTTAAATGAAGTCAAAGACGGTCAGGAAACTTCAAAATTGGAAGATACCAGTGAATTGAAAGTTGATCAAGAAACAGATGAGAATTTTGCACTAAAGGCTCTTAAAGAAGCATTCGAAGTTGTTGGTTATTCTCCAACACCTGAAGGTCAACTTTCATTTACAAAAGTGGGAAACCCTGCCATGGCATTGGCAGCATTCCTAGCACGTTTGGTGGGACCTGATGCTGCTATTGCTTCAGCACATAATTCTTTGAAATATATATCTGCCAGTTGTGGTATTGCGCTGGCTGCAAGGCATTGCTTTATTTTGGAAGATCCACCGAATGGCAGTAAGGAACATGCTGGTCCTGATAGTGTTTCTGCTGAAGTGGAAGCACAGAAAGACAAAGTCAATGAAGACAAAAGCCAGAAAGAGGATAACTCCACCTCAGGTTTGGAAGATAAAGATTCATCAAATAATAGCAGTGACAAGAAACTTGAAAAATCTTCTTCTGAAGAAAAGTCGCAATCTGCAAAAGAACAAGATGGCGTAGTTTCTGATGAGGAAGTAGGAACTGAAAATTTGAAGAACTCAGACAAGTTAGAGTTTCCAAGGGTTGAATCACCAACTACTGTGGAGGACACAACCGATTCAAAAGTGGAGACAGGGCATCAAACAAGTTCTGAGAAGGAATCAGGACGAGCAGGAAAGCCTTCTGAACCTACAGAGCCAGTAACTGATGTGGATATGTCTGATTCAGCTCCCCCTACAAAAAATGAGATTCAACAGCCAATTACGTCGAATTCAGTAGAGGAACCTCCTCAATCTAAAGAGGCAACAAAAGATGTAGATGTATCTAATTCTCTGGCTACAGAAATAAATGGACCTCAACCAGTGGTTACTGCCAAATCAGAAGAACCGCCTGAACCTACAGAGGTACCAAAGGATGTGGATATGGTGTGTGATTCTCAGACCCCACAAAAGGATGAGCCTCAGCAACCAGTTACATCAAATTCAGTGGTTGAAAAGGAAGCAAGTGACGATCAAACTAAAGATGGTAAAATAGAAAAACATGACAGTATGGAGACAAAGGTGGGTGAGAAAATTGATAAACTAAAGCTTGCTGCAGTTTCTGCAGTGTCAGCGGCTGCAGTGAAGGCAAAGCTTCTAGCAGAACAGGAAGAAGATCAAACCCGACAACTTGCAGCAATGTTGGTGGAGAAGCAGTTGCATAAGTTGGACGCCAAATTAGGATTCTTTAACGAGATGGAACATGTTGTAATGAGGGTAAGAGAGCAATTGGACAGGTCAAGACAGAAGCTCTACCATGAGCGGGCACAGATAATTGCATCTCGCCTTGGTGTACCAGGTTCATCTAGAGGCATGCCATCATCAATTCCTGCCAATAGAATGGCCATGAATATTGCAAACTCAGTTCCAAGGCCCACGCTAGGCATGACTTCCCAAAGGCCACCTATGTCAAGACCGATGGGGGCAGCTGCCCCGACTCCGTCAAACCAATTTTCAGCCACAACATTGGCAGGAAGTTCAATATGGCCTCCCAGAAAGGACAAACTTTCATCAGTTGGGTCCAAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04714 ko05225 map04714 map05225
Pfam Domains
Protein Families
Myb_DNA-binding SWIRM SWIRM-assoc_1 ZZ

Protein Analysis

1004

Amino Acids

108.53

Weight (kDa)

4.93

Isoelectric Point (pI)

50.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SWIRM PF04433 149 - 227 3.5e-20 SWIRM domain
ZZ PF00569 301 - 336 2.3e-08 Zinc finger, ZZ type
Myb_DNA-binding PF00249 359 - 401 5.6e-12 Myb-like DNA-binding domain
Myb_DNA-bind_6 PF13921 361 - 401 1.4e-06 Myb-like DNA-binding domain
SWIRM-assoc_1 PF16495 849 - 927 1.2e-23 SWIRM-associated region 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1128
Acc65I GGTACC 1 cut(s) 2350
AccB1I GGYRCC 2 cut(s) 1310, 2350
AccB7I CCANNNNNTGG 1 cut(s) 1757
AccBSI CCGCTC 1 cut(s) 2746
AccI GTMKAC 2 cut(s) 528, 1186
AccII CGCG 2 cut(s) 18, 168
AclI AACGTT 1 cut(s) 157
AclWI GGATC 2 cut(s) 190, 1742
AcoI YGGCCR 2 cut(s) 711, 2826
AcsI RAATTY 8 cut(s) 560, 623, 650, 1004, 1516, 1993, 2215, 2425
AcuI CTGAAG 9 cut(s) 888, 906, 1074, 1338, 1416, 1596, 1653, 1818, 1947
AcyI GRCGYC 3 cut(s) 85, 146, 2655
AfaI GTAC 3 cut(s) 905, 2352, 2778
AfeI AGCGCT 1 cut(s) 944
AflIII ACRYGT 2 cut(s) 1156, 2686
AhdI GACNNNNNGTC 1 cut(s) 1269
AjnI CCWGG 1 cut(s) 2779
AjuI GAANNNNNNNTTGG 6 cut(s) 688, 720, 1389, 1421, 2651, 2683
Alw26I GTCTC 4 cut(s) 1088, 1256, 2069, 2492
AlwI GGATC 2 cut(s) 190, 1742
AlwNI CAGNNNCTG 3 cut(s) 2150, 2546, 2561
Ama87I CYCGRG 1 cut(s) 216
Aor51HI AGCGCT 1 cut(s) 944
ApaI GGGCCC 2 cut(s) 223, 233
ApoI RAATTY 8 cut(s) 560, 623, 650, 1004, 1516, 1993, 2215, 2425
ArsI GACNNNNNNTTYG 2 cut(s) 1226, 1258
AseI ATTAAT 1 cut(s) 675
Asp700I GAANNNNTTC 2 cut(s) 560, 2125
Asp718I GGTACC 1 cut(s) 2350
AspLEI GCGC 2 cut(s) 945, 1717
AsuC2I CCSGG 4 cut(s) 217, 218, 305, 576
AsuHPI GGTGA 4 cut(s) 343, 737, 2028, 2522
AsuII TTCGAA 1 cut(s) 1548
AvaI CYCGRG 1 cut(s) 216
AvaII GGWCC 5 cut(s) 658, 1649, 1778, 2297, 3003
AxyI CCTNAGG 1 cut(s) 1861
BaeGI GKGCMC 4 cut(s) 223, 233, 581, 2752
BaeI ACNNNNGTAYC 2 cut(s) 2334, 2367
BalI TGGCCA 2 cut(s) 713, 2828
BanI GGYRCC 2 cut(s) 1310, 2350
BanII GRGCYC 3 cut(s) 100, 223, 233
BbsI GAAGAC 3 cut(s) 66, 1014, 1836
BbvCI CCTCAGC 1 cut(s) 2406
BccI CCATC 9 cut(s) 157, 722, 1232, 1241, 1952, 2462, 2674, 2809, 2896
BceAI ACGGC 4 cut(s) 25, 55, 220, 469
BciT130I CCWGG 1 cut(s) 2781
BciVI GTATCC 1 cut(s) 1408
BclI TGATCA 2 cut(s) 1087, 1498
BcnI CCSGG 4 cut(s) 217, 218, 305, 576
BcoDI GTCTC 4 cut(s) 1088, 1256, 2069, 2492
BfaI CTAG 7 cut(s) 234, 426, 633, 1634, 2582, 2790, 2864
BfmI CTRYAG 6 cut(s) 2136, 2283, 2343, 2538, 2547, 2562
BfoI RGCGCY 1 cut(s) 946
BfuI GTATCC 1 cut(s) 1408
BglI GCCNNNNNGGC 2 cut(s) 126, 889
BglII AGATCT 1 cut(s) 395
BlpI GCTNAGC 1 cut(s) 324
Bme1390I CCNGG 5 cut(s) 217, 218, 305, 576, 2781
Bme18I GGWCC 5 cut(s) 658, 1649, 1778, 2297, 3003
BmeRI GACNNNNNGTC 1 cut(s) 1269
BmeT110I CYCGRG 1 cut(s) 216
BmrFI CCNGG 5 cut(s) 217, 218, 305, 576, 2781
BmsI GCATC 6 cut(s) 558, 619, 726, 1645, 2092, 2771
BpiI GAAGAC 3 cut(s) 66, 1014, 1836
BplI GAGNNNNNCTC 2 cut(s) 1838, 1870
BpmI CTGGAG 1 cut(s) 380
Bpu10I CCTNAGC 1 cut(s) 2406
Bpu1102I GCTNAGC 1 cut(s) 324
Bpu14I TTCGAA 1 cut(s) 1548
BpuMI CCSGG 4 cut(s) 217, 218, 305, 576
Bsa29I ATCGAT 1 cut(s) 345
BsaAI YACGTR 1 cut(s) 542
BsaBI GATNNNNATC 1 cut(s) 972
BsaHI GRCGYC 3 cut(s) 85, 146, 2655
BsaJI CCNNGG 6 cut(s) 121, 216, 1614, 2024, 2770, 2852
BsaWI WCCGGW 1 cut(s) 1283
BsaXI ACNNNNNCTCC 8 cut(s) 365, 395, 464, 494, 502, 532, 2624, 2654
Bse118I RCCGGY 1 cut(s) 277
Bse1I ACTGG 7 cut(s) 1085, 1142, 1482, 1701, 2144, 2306, 2414
Bse21I CCTNAGG 1 cut(s) 1861
Bse3DI GCAATG 5 cut(s) 430, 907, 949, 1729, 2628
Bse8I GATNNNNATC 1 cut(s) 972
BseBI CCWGG 1 cut(s) 2781
BseCI ATCGAT 1 cut(s) 345
BseDI CCNNGG 6 cut(s) 121, 216, 1614, 2024, 2770, 2852
BseGI GGATG 3 cut(s) 149, 2365, 2404
BseJI GATNNNNATC 1 cut(s) 972
BseMI GCAATG 5 cut(s) 430, 907, 949, 1729, 2628
BseMII CTCAG 8 cut(s) 47, 315, 1875, 2019, 2088, 2396, 2420, 2859
BseNI ACTGG 7 cut(s) 1085, 1142, 1482, 1701, 2144, 2306, 2414
BseRI GAGGAG 2 cut(s) 485, 2223
BseSI GKGCMC 4 cut(s) 223, 233, 581, 2752
BseYI CCCAGC 2 cut(s) 260, 377
BsgI GTGCAG 1 cut(s) 1175
Bsh1236I CGCG 2 cut(s) 18, 168
BshNI GGYRCC 2 cut(s) 1310, 2350
BshVI ATCGAT 1 cut(s) 345
BsiHKCI CYCGRG 1 cut(s) 216
BsiSI CCGG 6 cut(s) 27, 217, 278, 305, 575, 1284
BslFI GGGAC 1 cut(s) 1662
BsmAI GTCTC 4 cut(s) 1088, 1256, 2069, 2492
BsmFI GGGAC 1 cut(s) 1662
BsmI GAATGC 2 cut(s) 1544, 1628
BsoBI CYCGRG 1 cut(s) 216
Bsp119I TTCGAA 1 cut(s) 1548
Bsp120I GGGCCC 2 cut(s) 219, 229
Bsp1286I GDGCHC 5 cut(s) 100, 223, 233, 581, 2752
Bsp143I GATC 9 cut(s) 195, 342, 395, 973, 1087, 1498, 1747, 2455, 2599
Bsp1720I GCTNAGC 1 cut(s) 324
Bsp19I CCATGG 1 cut(s) 1614
Bsp68I TCGCGA 1 cut(s) 168
BspCNI CTCAG 8 cut(s) 46, 316, 1874, 2018, 2089, 2395, 2419, 2858
BspDI ATCGAT 1 cut(s) 345
BspFNI CGCG 2 cut(s) 18, 168
BspHI TCATGA 1 cut(s) 552
BspMAI CTGCAG 3 cut(s) 2542, 2551, 2566
BspPI GGATC 2 cut(s) 190, 1742
BspT104I TTCGAA 1 cut(s) 1548
BspT107I GGYRCC 2 cut(s) 1310, 2350
BsrBI CCGCTC 1 cut(s) 2746
BsrDI GCAATG 5 cut(s) 430, 907, 949, 1729, 2628
BsrFI RCCGGY 1 cut(s) 277
BsrI ACTGG 7 cut(s) 1085, 1142, 1482, 1701, 2144, 2306, 2414
BssAI RCCGGY 1 cut(s) 277
BssECI CCNNGG 6 cut(s) 121, 216, 1614, 2024, 2770, 2852
BssMI GATC 9 cut(s) 195, 342, 395, 973, 1087, 1498, 1747, 2455, 2599
BssNAI GTATAC 2 cut(s) 529, 1187
BssNI GRCGYC 3 cut(s) 85, 146, 2655
BssT1I CCWWGG 4 cut(s) 1614, 2024, 2770, 2852
Bst1107I GTATAC 2 cut(s) 529, 1187
Bst2UI CCWGG 1 cut(s) 2781
Bst4CI ACNGT 5 cut(s) 725, 832, 1454, 2047, 2492
Bst6I CTCTTC 2 cut(s) 142, 864
BstACI GRCGYC 3 cut(s) 85, 146, 2655
BstAPI GCANNNNNTGC 3 cut(s) 481, 987, 2546
BstBAI YACGTR 1 cut(s) 542
BstBI TTCGAA 1 cut(s) 1548
BstDEI CTNAG 9 cut(s) 33, 324, 532, 1861, 2005, 2097, 2382, 2406, 2845
BstDSI CCRYGG 1 cut(s) 1614
BstF5I GGATG 3 cut(s) 149, 2365, 2404
BstFNI CGCG 2 cut(s) 18, 168
BstH2I RGCGCY 1 cut(s) 946
BstHHI GCGC 2 cut(s) 945, 1717
BstKTI GATC 9 cut(s) 198, 345, 398, 976, 1090, 1501, 1750, 2458, 2602
BstMAI GTCTC 4 cut(s) 1088, 1256, 2069, 2492
BstMBI GATC 9 cut(s) 195, 342, 395, 973, 1087, 1498, 1747, 2455, 2599
BstNI CCWGG 1 cut(s) 2781
BstNSI RCATGY 6 cut(s) 1021, 1160, 1272, 1775, 2690, 2800
BstSCI CCNGG 5 cut(s) 215, 216, 303, 574, 2779
BstSFI CTRYAG 6 cut(s) 2136, 2283, 2343, 2538, 2547, 2562
BstSLI GKGCMC 4 cut(s) 223, 233, 581, 2752
BstSNI TACGTA 1 cut(s) 542
BstUI CGCG 2 cut(s) 18, 168
BstV2I GAAGAC 3 cut(s) 66, 1014, 1836
BstX2I RGATCY 2 cut(s) 395, 1747
BstXI CCANNNNNNTGG 3 cut(s) 1621, 2824, 2950
BstYI RGATCY 2 cut(s) 395, 1747
BstZ17I GTATAC 2 cut(s) 529, 1187
Bsu15I ATCGAT 1 cut(s) 345
Bsu36I CCTNAGG 1 cut(s) 1861
BsuI GTATCC 1 cut(s) 1408
BsuTUI ATCGAT 1 cut(s) 345
BtgI CCRYGG 1 cut(s) 1614
BtsCI GGATG 3 cut(s) 149, 2365, 2404
BtsI GCAGTG 4 cut(s) 409, 1903, 2556, 2571
BtsIMutI CAGTG 9 cut(s) 409, 837, 981, 1489, 1903, 2313, 2436, 2556, 2571
BtuMI TCGCGA 1 cut(s) 168
CaiI CAGNNNCTG 3 cut(s) 2150, 2546, 2561
CciI TCATGA 1 cut(s) 552
CfoI GCGC 2 cut(s) 945, 1717
Cfr10I RCCGGY 1 cut(s) 277
Cfr9I CCCGGG 1 cut(s) 216
ClaI ATCGAT 1 cut(s) 345
CseI GACGC 4 cut(s) 29, 74, 154, 2663
CsiI ACCWGGT 1 cut(s) 2779
Csp6I GTAC 3 cut(s) 904, 2351, 2777
CspCI CAANNNNNGTGG 8 cut(s) 2028, 2063, 2343, 2378, 2412, 2447, 2610, 2645
CviQI GTAC 3 cut(s) 904, 2351, 2777
DdeI CTNAG 9 cut(s) 33, 324, 532, 1861, 2005, 2097, 2382, 2406, 2845
DpnI GATC 9 cut(s) 197, 344, 397, 975, 1089, 1500, 1749, 2457, 2601
DpnII GATC 9 cut(s) 195, 342, 395, 973, 1087, 1498, 1747, 2455, 2599
DraI TTTAAA 1 cut(s) 1437
DriI GACNNNNNGTC 1 cut(s) 1269
EaeI YGGCCR 2 cut(s) 711, 2826
Eam1104I CTCTTC 2 cut(s) 142, 864
Eam1105I GACNNNNNGTC 1 cut(s) 1269
EarI CTCTTC 2 cut(s) 142, 864
EciI GGCGGA 1 cut(s) 108
Eco105I TACGTA 1 cut(s) 542
Eco130I CCWWGG 4 cut(s) 1614, 2024, 2770, 2852
Eco147I AGGCCT 1 cut(s) 883
Eco24I GRGCYC 3 cut(s) 100, 223, 233
Eco47I GGWCC 5 cut(s) 658, 1649, 1778, 2297, 3003
Eco47III AGCGCT 1 cut(s) 944
Eco57I CTGAAG 9 cut(s) 888, 906, 1074, 1338, 1416, 1596, 1653, 1818, 1947
Eco81I CCTNAGG 1 cut(s) 1861
Eco88I CYCGRG 1 cut(s) 216
EcoO109I RGGNCCY 3 cut(s) 229, 230, 1649
EcoRI GAATTC 1 cut(s) 2215
EcoRII CCWGG 1 cut(s) 2779
EcoT14I CCWWGG 4 cut(s) 1614, 2024, 2770, 2852
EcoT38I GRGCYC 3 cut(s) 100, 223, 233
ErhI CCWWGG 4 cut(s) 1614, 2024, 2770, 2852
FalI AAGNNNNNCTT 2 cut(s) 1569, 1601
FaqI GGGAC 1 cut(s) 1662
FauI CCCGC 1 cut(s) 2739
FbaI TGATCA 2 cut(s) 1087, 1498
FblI GTMKAC 2 cut(s) 528, 1186
FokI GGATG 3 cut(s) 136, 2372, 2411
FriOI GRGCYC 3 cut(s) 100, 223, 233
FspBI CTAG 7 cut(s) 234, 426, 633, 1634, 2582, 2790, 2864
GlaI GCGC 2 cut(s) 944, 1716
GsaI CCCAGC 2 cut(s) 264, 381
GsuI CTGGAG 1 cut(s) 380
HaeII RGCGCY 1 cut(s) 946
HapII CCGG 6 cut(s) 27, 217, 278, 305, 575, 1284
HgaI GACGC 4 cut(s) 29, 74, 154, 2663
HhaI GCGC 2 cut(s) 945, 1717
Hin1I GRCGYC 3 cut(s) 85, 146, 2655
Hin6I GCGC 2 cut(s) 943, 1715
HinP1I GCGC 2 cut(s) 943, 1715
HincII GTYRAC 2 cut(s) 213, 1583
HindII GTYRAC 2 cut(s) 213, 1583
HindIII AAGCTT 2 cut(s) 2531, 2576
HpaII CCGG 6 cut(s) 27, 217, 278, 305, 575, 1284
HphI GGTGA 4 cut(s) 343, 737, 2028, 2522
Hpy166II GTNNAC 7 cut(s) 213, 460, 529, 1187, 1402, 1583, 2777
Hpy8I GTNNAC 7 cut(s) 213, 460, 529, 1187, 1402, 1583, 2777
Hpy99I CGWCG 5 cut(s) 23, 90, 148, 725, 2215
HpyAV CCTTC 7 cut(s) 166, 881, 1112, 1571, 2095, 2136, 2563
HpyCH4III ACNGT 5 cut(s) 725, 832, 1454, 2047, 2492
HpyCH4IV ACGT 5 cut(s) 157, 525, 541, 1639, 2210
HpyF3I CTNAG 9 cut(s) 33, 324, 532, 1861, 2005, 2097, 2382, 2406, 2845
HpySE526I ACGT 5 cut(s) 157, 525, 541, 1639, 2210
Hsp92I GRCGYC 3 cut(s) 85, 146, 2655
HspAI GCGC 2 cut(s) 943, 1715
KpnI GGTACC 1 cut(s) 2354
KroI GCCGGC 1 cut(s) 277
KroNI GCCGGC 1 cut(s) 279
Ksp22I TGATCA 2 cut(s) 1087, 1498
Kzo9I GATC 9 cut(s) 195, 342, 395, 973, 1087, 1498, 1747, 2455, 2599
LmnI GCTCC 5 cut(s) 95, 472, 607, 1045, 2179
LweI GCATC 6 cut(s) 558, 619, 726, 1645, 2092, 2771
MabI ACCWGGT 1 cut(s) 2779
MaeI CTAG 7 cut(s) 234, 426, 633, 1634, 2582, 2790, 2864
MaeII ACGT 5 cut(s) 157, 525, 541, 1639, 2210
MaeIII GTNAC 8 cut(s) 508, 1352, 1390, 1898, 2146, 2311, 2416, 2450
MalI GATC 9 cut(s) 197, 344, 397, 975, 1089, 1500, 1749, 2457, 2601
MbiI CCGCTC 1 cut(s) 2746
MboI GATC 9 cut(s) 195, 342, 395, 973, 1087, 1498, 1747, 2455, 2599
MfeI CAATTG 3 cut(s) 861, 1209, 2711
MflI RGATCY 2 cut(s) 395, 1747
MhlI GDGCHC 5 cut(s) 100, 223, 233, 581, 2752
MlsI TGGCCA 2 cut(s) 713, 2828
MluNI TGGCCA 2 cut(s) 713, 2828
MlyI GAGTC 6 cut(s) 47, 505, 511, 1004, 1090, 2914
MmeI TCCRAC 6 cut(s) 83, 585, 598, 1298, 1592, 2631
Mox20I TGGCCA 2 cut(s) 713, 2828
MroNI GCCGGC 1 cut(s) 277
MroXI GAANNNNTTC 2 cut(s) 560, 2125
MscI TGGCCA 2 cut(s) 713, 2828
MseI TTAA 7 cut(s) 495, 593, 675, 993, 1436, 1536, 2673
MslI CAYNNNNRTG 1 cut(s) 1040
Msp20I TGGCCA 2 cut(s) 713, 2828
MspA1I CMGCKG 5 cut(s) 260, 896, 926, 2558, 2912
MspI CCGG 6 cut(s) 27, 217, 278, 305, 575, 1284
MspR9I CCNGG 5 cut(s) 217, 218, 305, 576, 2781
MunI CAATTG 3 cut(s) 861, 1209, 2711
Mva1269I GAATGC 2 cut(s) 1544, 1628
MvaI CCWGG 1 cut(s) 2781
MvnI CGCG 2 cut(s) 18, 168
NaeI GCCGGC 1 cut(s) 279
NciI CCSGG 4 cut(s) 217, 218, 305, 576
NcoI CCATGG 1 cut(s) 1614
NdeII GATC 9 cut(s) 195, 342, 395, 973, 1087, 1498, 1747, 2455, 2599
NgoMIV GCCGGC 1 cut(s) 277
NmeAIII GCCGAG 3 cut(s) 61, 91, 102
NmuCI GTSAC 5 cut(s) 508, 1352, 1390, 1898, 2450
NruI TCGCGA 1 cut(s) 168
NspI RCATGY 6 cut(s) 1021, 1160, 1272, 1775, 2690, 2800
NspV TTCGAA 1 cut(s) 1548
PaeI GCATGC 1 cut(s) 2800
PagI TCATGA 1 cut(s) 552
PceI AGGCCT 1 cut(s) 883
PciI ACATGT 2 cut(s) 1156, 2686
PctI GAATGC 2 cut(s) 1544, 1628
PdiI GCCGGC 1 cut(s) 279
PdmI GAANNNNTTC 2 cut(s) 560, 2125
PflFI GACNNNGTC 2 cut(s) 1820, 2923
PflMI CCANNNNNTGG 1 cut(s) 1757
PleI GAGTC 6 cut(s) 47, 505, 511, 1004, 1090, 2914
PpsI GAGTC 6 cut(s) 47, 505, 511, 1004, 1090, 2914
Ppu21I YACGTR 1 cut(s) 542
PpuMI RGGWCCY 1 cut(s) 1649
PscI ACATGT 2 cut(s) 1156, 2686
PshBI ATTAAT 1 cut(s) 675
PsiI TTATAA 1 cut(s) 1128
Psp1406I AACGTT 1 cut(s) 157
Psp5II RGGWCCY 1 cut(s) 1649
Psp6I CCWGG 1 cut(s) 2779
PspFI CCCAGC 2 cut(s) 260, 377
PspGI CCWGG 1 cut(s) 2779
PspOMI GGGCCC 2 cut(s) 219, 229
PspPPI RGGWCCY 1 cut(s) 1649
PstI CTGCAG 3 cut(s) 2542, 2551, 2566
PstNI CAGNNNCTG 3 cut(s) 2150, 2546, 2561
PsuI RGATCY 2 cut(s) 395, 1747
PsyI GACNNNGTC 2 cut(s) 1820, 2923
PvuII CAGCTG 4 cut(s) 260, 896, 926, 2912
RruI TCGCGA 1 cut(s) 168
RsaI GTAC 3 cut(s) 905, 2352, 2778
RsaNI GTAC 3 cut(s) 904, 2351, 2777
RseI CAYNNNNRTG 1 cut(s) 1040
SaqAI TTAA 7 cut(s) 495, 593, 675, 993, 1436, 1536, 2673
Sau3AI GATC 9 cut(s) 195, 342, 395, 973, 1087, 1498, 1747, 2455, 2599
SchI GAGTC 6 cut(s) 47, 505, 511, 1004, 1090, 2914
ScrFI CCNGG 5 cut(s) 217, 218, 305, 576, 2781
SduI GDGCHC 5 cut(s) 100, 223, 233, 581, 2752
SexAI ACCWGGT 1 cut(s) 2779
SfaNI GCATC 6 cut(s) 558, 619, 726, 1645, 2092, 2771
SfcI CTRYAG 6 cut(s) 2136, 2283, 2343, 2538, 2547, 2562
SfiI GGCCNNNNNGGCC 1 cut(s) 889
SfuI TTCGAA 1 cut(s) 1548
SinI GGWCC 5 cut(s) 658, 1649, 1778, 2297, 3003
SmaI CCCGGG 1 cut(s) 218
SmiI ATTTAAAT 1 cut(s) 1437
SmiMI CAYNNNNRTG 1 cut(s) 1040
SnaBI TACGTA 1 cut(s) 542
SphI GCATGC 1 cut(s) 2800
SseBI AGGCCT 1 cut(s) 883
SspI AATATT 1 cut(s) 2836
SspMI CTAG 7 cut(s) 234, 426, 633, 1634, 2582, 2790, 2864
StuI AGGCCT 1 cut(s) 883
StyD4I CCNGG 5 cut(s) 215, 216, 303, 574, 2779
StyI CCWWGG 4 cut(s) 1614, 2024, 2770, 2852
SwaI ATTTAAAT 1 cut(s) 1437
TaaI ACNGT 5 cut(s) 725, 832, 1454, 2047, 2492
TaiI ACGT 5 cut(s) 160, 528, 544, 1642, 2213
TaqI TCGA 7 cut(s) 143, 194, 345, 720, 1008, 1548, 2213
TaqII GACCGA 1 cut(s) 2914
TauI GCSGC 5 cut(s) 18, 40, 129, 298, 2561
Tru1I TTAA 7 cut(s) 495, 593, 675, 993, 1436, 1536, 2673
Tru9I TTAA 7 cut(s) 495, 593, 675, 993, 1436, 1536, 2673
TscAI CASTG 9 cut(s) 409, 837, 988, 1489, 1903, 2313, 2436, 2556, 2571
TseFI GTSAC 5 cut(s) 508, 1352, 1390, 1898, 2450
Tsp45I GTSAC 5 cut(s) 508, 1352, 1390, 1898, 2450
TspGWI ACGGA 1 cut(s) 2913
TspMI CCCGGG 1 cut(s) 216
TspRI CASTG 9 cut(s) 409, 837, 988, 1489, 1903, 2313, 2436, 2556, 2571
Tth111I GACNNNGTC 2 cut(s) 1820, 2923
Van91I CCANNNNNTGG 1 cut(s) 1757
VpaK11BI GGWCC 5 cut(s) 658, 1649, 1778, 2297, 3003
VspI ATTAAT 1 cut(s) 675
XapI RAATTY 8 cut(s) 560, 623, 650, 1004, 1516, 1993, 2215, 2425
XbaI TCTAGA 1 cut(s) 2789
XceI RCATGY 6 cut(s) 1021, 1160, 1272, 1775, 2690, 2800
XcmI CCANNNNNNNNNTGG 1 cut(s) 1864
XmaI CCCGGG 1 cut(s) 216
XmiI GTMKAC 2 cut(s) 528, 1186
XmnI GAANNNNTTC 2 cut(s) 560, 2125
XspI CTAG 7 cut(s) 234, 426, 633, 1634, 2582, 2790, 2864
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.